AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0327780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0327780 MtrunA17_Chr2g0309231 96.220 291 11 0 1 291 309 599 0.0 602
Msa0327780 MtrunA17_Chr7g0222441 89.848 197 16 1 368 560 250 446 9.77e-115 360
Msa0327780 MtrunA17_Chr8g0341321 63.214 280 64 4 368 618 237 506 2.96e-105 334
Msa0327780 MtrunA17_Chr8g0358431 78.771 179 34 1 368 542 27 205 1.21e-91 285
Msa0327780 MtrunA17_Chr6g0458971 56.345 197 72 2 368 560 183 369 2.92e-61 215
Msa0327780 MtrunA17_Chr7g0228611 55.838 197 73 2 368 560 180 366 3.81e-61 214
Msa0327780 MtrunA17_Chr8g0356701 82.243 107 19 0 455 561 1 107 1.25e-55 186
Msa0327780 MtrunA17_Chr7g0271531 54.922 193 73 4 368 556 270 452 7.54e-55 199
Msa0327780 MtrunA17_Chr8g0356771 69.065 139 25 2 368 488 27 165 1.41e-54 185
Msa0327780 MtrunA17_Chr4g0035581 82.716 81 12 1 560 638 306 386 4.39e-34 140
Msa0327780 MtrunA17_Chr8g0356781 71.951 82 23 0 490 571 1 82 9.96e-33 126
Msa0327780 MtrunA17_Chr1g0212791 26.829 287 169 7 7 289 278 527 1.90e-23 105
Msa0327780 MtrunA17_Chr7g0222681 27.986 293 162 11 4 289 299 549 3.22e-22 101
Msa0327780 MtrunA17_Chr2g0326781 82.000 50 2 2 684 732 539 582 1.45e-15 80.9
Msa0327780 MtrunA17_Chr8g0388331 93.548 31 2 0 740 770 180 210 5.73e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0327780 AT1G05590.2 70.890 292 80 2 1 291 282 569 2.90e-150 451
Msa0327780 AT1G05590.3 70.890 292 80 2 1 291 282 569 2.90e-150 451
Msa0327780 AT1G05590.1 70.890 292 80 2 1 291 282 569 2.90e-150 451
Msa0327780 AT5G13110.1 84.184 196 27 1 368 559 251 446 2.88e-108 343
Msa0327780 AT1G24280.1 83.673 196 28 1 368 559 254 449 4.66e-106 337
Msa0327780 AT5G35790.1 78.571 196 38 1 368 559 232 427 1.44e-99 320
Msa0327780 AT3G27300.1 57.360 197 70 2 368 560 181 367 4.13e-63 220
Msa0327780 AT3G27300.3 57.360 197 70 2 368 560 181 367 4.13e-63 220
Msa0327780 AT3G27300.2 57.360 197 70 2 368 560 181 367 4.13e-63 220
Msa0327780 AT3G27300.5 57.360 197 70 2 368 560 235 421 1.59e-62 220
Msa0327780 AT3G27300.4 57.360 197 70 2 368 560 252 438 2.23e-62 220
Msa0327780 AT5G40760.2 56.345 197 72 2 368 560 180 366 9.75e-62 216
Msa0327780 AT5G40760.1 56.345 197 72 2 368 560 180 366 9.75e-62 216
Msa0327780 AT1G09420.1 52.525 198 77 4 368 560 295 480 8.11e-53 194
Msa0327780 AT1G09420.2 49.519 208 78 5 368 560 295 490 3.15e-49 184
Msa0327780 AT2G16440.1 79.012 81 15 1 560 638 313 393 3.43e-32 134
Msa0327780 AT3G55260.1 26.241 282 167 7 10 289 290 532 6.95e-22 100
Msa0327780 AT1G65590.1 26.374 273 158 8 10 280 287 518 1.43e-21 99.8
Msa0327780 AT2G28320.1 70.000 50 8 2 684 732 549 592 2.79e-12 70.9

Find 185 sgRNAs with CRISPR-Local

Find 607 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATATTCTCAGCAGATTT+TGG 0.204590 2_4:-39730033 Msa0327780:CDS
CTCTGGTGTGGTTCTTATAT+TGG 0.220904 2_4:+39729419 None:intergenic
TGTAGGTACTTTGACAATTA+TGG 0.237604 2_4:-39729911 Msa0327780:intron
TTGGTAGGTCTTGGGGTTTA+AGG 0.248007 2_4:+39735252 None:intergenic
CAGAAATTTCTATCAAATAA+TGG 0.278468 2_4:-39735121 Msa0327780:CDS
CTGCAGGACTTGGTAGGTCT+TGG 0.282162 2_4:+39735243 None:intergenic
TGCAGGACTTGGTAGGTCTT+GGG 0.284268 2_4:+39735244 None:intergenic
TGTGGACACGGCGACTTTAC+TGG 0.284986 2_4:-39734854 Msa0327780:CDS
GGGCAGCCGCGGCAAATGTC+TGG 0.287615 2_4:+39729338 None:intergenic
GCAGGTTGACTTTGGTGTTT+TGG 0.289425 2_4:-39726996 Msa0327780:intron
ACTAGCCGATGAAACTGTTT+TGG 0.294927 2_4:-39734663 Msa0327780:CDS
ATGGACATGACAACACTAAA+AGG 0.308012 2_4:-39734934 Msa0327780:CDS
GACCGAAGAAGAAGCGAAAT+TGG 0.308102 2_4:-39734717 Msa0327780:CDS
GATAGAAATTTCTGAATTGT+TGG 0.328121 2_4:+39735130 None:intergenic
CAACCGTACTGTTGTCTATT+GGG 0.333502 2_4:-39735038 Msa0327780:CDS
TGGTAGGTCTTGGGGTTTAA+GGG 0.334909 2_4:+39735253 None:intergenic
TTCAACCACTTTGGTGTGTT+AGG 0.344290 2_4:-39734487 Msa0327780:CDS
TAAACAAATTATGAGGCTTC+AGG 0.348456 2_4:-39728405 Msa0327780:CDS
TCAACCGTACTGTTGTCTAT+TGG 0.350488 2_4:-39735039 Msa0327780:CDS
CTTACTATTGCATGACAAAC+TGG 0.357680 2_4:-39728336 Msa0327780:CDS
GATGATCTTGGTGGCCGTCC+TGG 0.359921 2_4:-39727028 Msa0327780:CDS
AGTCCTTGTGGTCAGGCAAT+AGG 0.362517 2_4:-39734604 Msa0327780:CDS
AGCAAATAGATAAGTGGTTA+AGG 0.372183 2_4:+39727099 None:intergenic
CCAGAATGGTAAAATTGTTC+CGG 0.373560 2_4:+39735190 None:intergenic
ATTCTGAAGCGTGTAGAAAA+AGG 0.373678 2_4:-39730932 Msa0327780:CDS
GGAGGAAGAAGAACGGGAAC+GGG 0.374447 2_4:-39732691 Msa0327780:CDS
TCGATGAAAGTATCCATATC+AGG 0.376038 2_4:+39727716 None:intergenic
GGCTCTGTTGCAAGACGATC+TGG 0.380818 2_4:+39735295 None:intergenic
TATAGAATCGATCACTATCT+TGG 0.382137 2_4:-39730147 Msa0327780:intron
TCCTCTACATCCAAACTAAC+AGG 0.382610 2_4:+39729824 None:intergenic
AGTCTGGCTGATACCTGATA+TGG 0.388600 2_4:-39727729 Msa0327780:CDS
AACCAATTTCGCTTCTTCTT+CGG 0.390626 2_4:+39734715 None:intergenic
AATGGAAACTCCTGTTAGTT+TGG 0.394148 2_4:-39729834 Msa0327780:CDS
TCAGCCATTGCAGAAGTTCT+AGG 0.394283 2_4:+39734626 None:intergenic
CATCGCACCTGATATGTCTT+TGG 0.395784 2_4:+39727656 None:intergenic
AGAAGAACGGGAACGGGAAA+GGG 0.396624 2_4:-39732685 Msa0327780:CDS
CATGACAAACTGGTGGATAC+TGG 0.399287 2_4:-39728326 Msa0327780:CDS
ATGACGTCGTACCAGGTTGC+TGG 0.406537 2_4:-39735162 Msa0327780:CDS
GACTTAACAGTTCTCTTAGT+TGG 0.411810 2_4:+39728160 None:intergenic
ACTACATCCTCGAGTTTAAT+CGG 0.412521 2_4:+39729448 None:intergenic
AAAGAAACCTACTTTAGATA+TGG 0.414269 2_4:+39726778 None:intergenic
GTCCTTGTGGTCAGGCAATA+GGG 0.416098 2_4:-39734603 Msa0327780:CDS
CTTTGCCTAATTAAAATCAA+TGG 0.418036 2_4:-39726253 Msa0327780:three_prime_UTR
CGATGTAACCACATTGTTCC+CGG 0.418185 2_4:-39735209 Msa0327780:CDS
TTGAAGATCAATGCACTTGA+AGG 0.424310 2_4:-39726413 Msa0327780:three_prime_UTR
AGAATGGTGAACAGAGGTAT+AGG 0.424887 2_4:-39734521 Msa0327780:CDS
TAACATGTGCTAACATGTTC+TGG 0.425511 2_4:-39735339 None:intergenic
GTCAGGCAATAGGGATGAAA+AGG 0.425841 2_4:-39734594 Msa0327780:CDS
GCCTGTCAGGGATATAACTA+TGG 0.426019 2_4:-39726487 Msa0327780:intron
GGATTTAAATGACCTGTTCC+CGG 0.426058 2_4:+39735274 None:intergenic
AAAAGGACCAAAGACATATC+AGG 0.426577 2_4:-39727663 Msa0327780:intron
AAAAGGGGAGAAACGGGAAC+GGG 0.427372 2_4:-39732712 Msa0327780:CDS
ACACACCAAAGTGGTTGAAT+AGG 0.427892 2_4:+39734491 None:intergenic
ACGATCTGGCCAATCGCTTC+CGG 0.428599 2_4:+39735309 None:intergenic
TAGTTTCTTTGATCATTCAT+TGG 0.431004 2_4:+39726170 None:intergenic
CTGTTACTTGACAGGGATGT+TGG 0.431891 2_4:-39730974 Msa0327780:intron
ATCAGGTGACTGGTATATAC+AGG 0.439760 2_4:-39728204 Msa0327780:intron
GTCTGGGTTAAGCTGTCCTT+TGG 0.440910 2_4:+39729355 None:intergenic
TTGTAATTGTATATAACCTT+AGG 0.442094 2_4:-39726290 Msa0327780:three_prime_UTR
ATCTGTAGAAGTAAAGTGAT+AGG 0.442218 2_4:-39732919 Msa0327780:CDS
TTACTGATAAACAAATTATG+AGG 0.445606 2_4:-39728412 Msa0327780:CDS
CTTGCAACAGAGCCGGGAAC+AGG 0.445919 2_4:-39735286 Msa0327780:CDS
CAGAATGGTAAAATTGTTCC+GGG 0.446032 2_4:+39735191 None:intergenic
AAGAAGAACGGGAACGGGAA+AGG 0.451694 2_4:-39732686 Msa0327780:CDS
CAACAGATAGATTGAATGAA+TGG 0.452558 2_4:-39734550 Msa0327780:CDS
CATAAAAGCAAATAGATAAG+TGG 0.452901 2_4:+39727093 None:intergenic
ATGATCTTGGTGGCCGTCCT+GGG 0.462970 2_4:-39727027 Msa0327780:CDS
TGGATATGCAACACCTCCTC+TGG 0.463674 2_4:+39729402 None:intergenic
AGATCGTCTTGCAACAGAGC+CGG 0.466886 2_4:-39735293 Msa0327780:CDS
CTCGGTGTGCAAAACAAAGT+TGG 0.468884 2_4:+39726458 None:intergenic
AGTATTTACGACAACCAAAC+AGG 0.473889 2_4:-39734824 Msa0327780:CDS
GGAACGGGAGGAAGAAGAAC+GGG 0.475533 2_4:-39732697 Msa0327780:CDS
CCTCCCTCAGGTATCTCGTC+AGG 0.476130 2_4:+39728377 None:intergenic
TGATAAACGTCTCAAGGACT+TGG 0.477132 2_4:+39735089 None:intergenic
AGCATTATGCAGGTTGACTT+TGG 0.479540 2_4:-39727004 Msa0327780:CDS
ACTAAAAGGATAGTATCTTC+TGG 0.481580 2_4:-39734920 Msa0327780:CDS
GTATGACATTCTGCAGGACT+TGG 0.482257 2_4:+39735233 None:intergenic
ATCGAAAATTTAAACAGCGT+TGG 0.484696 2_4:-39727698 Msa0327780:CDS
GATCGTCTTGCAACAGAGCC+GGG 0.487708 2_4:-39735292 Msa0327780:CDS
GCAGGACTTGGTAGGTCTTG+GGG 0.489357 2_4:+39735245 None:intergenic
GTCATGATCTTAAGAAAAGA+AGG 0.490748 2_4:+39726805 None:intergenic
CTTCATAGATAATGCAAGAT+GGG 0.490793 2_4:-39729314 Msa0327780:CDS
CTTGCAGAAATATGCAGCAC+AGG 0.492843 2_4:-39726881 Msa0327780:intron
TCCTGTTAGTTTGGATGTAG+AGG 0.492884 2_4:-39729825 Msa0327780:CDS
GGTGCTGATGACGTCGTACC+AGG 0.495012 2_4:-39735169 Msa0327780:CDS
TCGGTGTGCAAAACAAAGTT+GGG 0.496240 2_4:+39726459 None:intergenic
GGTGGCCAGCCGGAAGCGAT+TGG 0.500162 2_4:-39735318 Msa0327780:CDS
ATGGCTGAGTCCTTGTGGTC+AGG 0.502527 2_4:-39734611 Msa0327780:CDS
AGAGGACATTAGAAATGAAA+AGG 0.504615 2_4:-39729807 Msa0327780:intron
GACAGAAGGGAAGATGATCT+TGG 0.506460 2_4:-39727040 Msa0327780:CDS
TGCAAATGGTTGCTGCAGAT+TGG 0.511099 2_4:-39727072 Msa0327780:CDS
TCTGGCCAATCGCTTCCGGC+TGG 0.511465 2_4:+39735313 None:intergenic
AATAGACAACAGTACGGTTG+AGG 0.513519 2_4:+39735041 None:intergenic
AACATGTTCTGGTGGCCAGC+CGG 0.515403 2_4:-39735328 Msa0327780:CDS
TTAAGAAAAGAAGGATTCAA+AGG 0.515731 2_4:+39726814 None:intergenic
CCGTCCTGGGAGCATTATGC+AGG 0.517123 2_4:-39727014 Msa0327780:CDS
GGGAGGAAGAAGAACGGGAA+CGG 0.518287 2_4:-39732692 Msa0327780:CDS
AGGGGAGAAACGGGAACGGG+AGG 0.518667 2_4:-39732709 Msa0327780:CDS
TAGATAATGCAAGATGGGAT+GGG 0.518772 2_4:-39729309 Msa0327780:CDS
CTGGTGGATACTGGAAAGCC+AGG 0.518819 2_4:-39728317 Msa0327780:CDS
GGCAGCCGCGGCAAATGTCT+GGG 0.520346 2_4:+39729339 None:intergenic
GTGTGAGGCGTTCCTCCCTC+AGG 0.520495 2_4:+39728365 None:intergenic
TGTATTGCCTCGACCACAAA+GGG 0.520587 2_4:+39730070 None:intergenic
AATACTAGTCCTCTTTGCAA+TGG 0.521201 2_4:-39729852 Msa0327780:CDS
CTGAGCCTATTCAACCACTT+TGG 0.522499 2_4:-39734496 Msa0327780:CDS
ATCTATGAAGTGGGCAGCCG+CGG 0.523740 2_4:+39729327 None:intergenic
TATTATCTTGACTGTGGACA+CGG 0.524989 2_4:-39734866 Msa0327780:CDS
CTATCTTGGAAAAGAGCTTG+TGG 0.529498 2_4:-39730133 Msa0327780:CDS
ATAGACAACAGTACGGTTGA+GGG 0.530612 2_4:+39735042 None:intergenic
TTTGTTGTACATCAGGTGAC+TGG 0.533031 2_4:-39728214 Msa0327780:intron
TAAGAAAAGAAGGATTCAAA+GGG 0.534209 2_4:+39726815 None:intergenic
AGGCAACTTATAATTGCCTA+AGG 0.535020 2_4:+39726274 None:intergenic
AACGATGGCGGCTCTTGGTG+TGG 0.535553 2_4:-39734791 Msa0327780:CDS
TCTATAGCTGCAAATTGAAG+TGG 0.536075 2_4:+39726323 None:intergenic
ATCCCTATTGCCTGACCACA+AGG 0.540723 2_4:+39734601 None:intergenic
AAATTTCTGAATTGTTGGAT+CGG 0.547169 2_4:+39735135 None:intergenic
CTCACCTCAACTCTGTCACC+TGG 0.549979 2_4:+39728299 None:intergenic
ATCTTGCATTATCTATGAAG+TGG 0.550073 2_4:+39729317 None:intergenic
ATAGATAATGCAAGATGGGA+TGG 0.550173 2_4:-39729310 Msa0327780:CDS
TTGGTACTGAAGGACGTGGC+AGG 0.552068 2_4:-39730014 Msa0327780:intron
CTTTGGTGTGTTAGGAACCC+TGG 0.555049 2_4:-39734479 Msa0327780:intron
CGGTTGAGGGATAAAATGAA+AGG 0.561852 2_4:+39735055 None:intergenic
AAAGTGATAGGAGAAGTTGC+TGG 0.567098 2_4:-39732907 Msa0327780:CDS
AGAAATATGCAGCACAGGGT+GGG 0.567302 2_4:-39726876 Msa0327780:CDS
ATGCAACACCTCCTCTGGTG+TGG 0.571539 2_4:+39729407 None:intergenic
CTGCAATGGCTGAGTCCTTG+TGG 0.573090 2_4:-39734616 Msa0327780:CDS
CGAATCCAAAACAGTTTCAT+CGG 0.574123 2_4:+39734658 None:intergenic
CGACGTCATCAGCACCAGAA+TGG 0.582990 2_4:+39735176 None:intergenic
ACTTCATAGATAATGCAAGA+TGG 0.584523 2_4:-39729315 Msa0327780:CDS
TGTTGTTGATAAACGTCTCA+AGG 0.587054 2_4:+39735083 None:intergenic
GGGAACGGGAGGAAGAAGAA+CGG 0.587711 2_4:-39732698 Msa0327780:CDS
ATTGGTTGAGATCTGACAGA+AGG 0.589843 2_4:-39727054 Msa0327780:CDS
GGTTGAGGGATAAAATGAAA+GGG 0.590587 2_4:+39735056 None:intergenic
CAGAAATATGCAGCACAGGG+TGG 0.591099 2_4:-39726877 Msa0327780:CDS
TGAGAATCGTCGATGGAACA+TGG 0.591958 2_4:+39734990 None:intergenic
AAAATGTGTTGCTATCATGA+AGG 0.593996 2_4:-39727994 Msa0327780:CDS
CAGGAGTTTCCATTGCAAAG+AGG 0.596729 2_4:+39729843 None:intergenic
GTGATAGGAGAAGTTGCTGG+TGG 0.599516 2_4:-39732904 Msa0327780:CDS
AGATAATGCAAGATGGGATG+GGG 0.599941 2_4:-39729308 Msa0327780:CDS
TTGGTTGAGATCTGACAGAA+GGG 0.602460 2_4:-39727053 Msa0327780:CDS
TGATGACAAAACTGTACCAA+AGG 0.605343 2_4:-39729371 Msa0327780:CDS
TTGGCCTAGAACTTCTGCAA+TGG 0.607551 2_4:-39734630 Msa0327780:CDS
TGGGAAATCTCTATTCATGA+AGG 0.608432 2_4:-39732884 Msa0327780:CDS
GACTTCTATTATCTTGACTG+TGG 0.608516 2_4:-39734872 Msa0327780:CDS
CTTTAACAAGATCATTCAAG+CGG 0.617914 2_4:-39730544 Msa0327780:CDS
TCAACCTGCATAATGCTCCC+AGG 0.618526 2_4:+39727010 None:intergenic
TGATAGGAGAAGTTGCTGGT+GGG 0.619992 2_4:-39732903 Msa0327780:CDS
TCTTGCATTATCTATGAAGT+GGG 0.621537 2_4:+39729318 None:intergenic
TCAGGCAATAGGGATGAAAA+GGG 0.628998 2_4:-39734593 Msa0327780:CDS
GAATGAATGGAGAAGCAGAA+TGG 0.631006 2_4:-39734537 Msa0327780:CDS
TATAAGAACCACACCAGAGG+AGG 0.636996 2_4:-39729415 Msa0327780:CDS
AAAGCCAGGTGACAGAGTTG+AGG 0.641668 2_4:-39728303 Msa0327780:intron
TTGTTGCTAATCTTCCACCT+CGG 0.643102 2_4:+39726440 None:intergenic
ATGTATTGCCTCGACCACAA+AGG 0.643641 2_4:+39730069 None:intergenic
ACTATTGCATGACAAACTGG+TGG 0.645480 2_4:-39728333 Msa0327780:CDS
ATACAGGGCTATGAATGTCA+AGG 0.646972 2_4:-39728188 Msa0327780:CDS
TATGAGACCGATTAAACTCG+AGG 0.649881 2_4:-39729455 Msa0327780:CDS
CTGATGATGACACGATGGCG+CGG 0.650072 2_4:+39734894 None:intergenic
TTGCAGAAATATGCAGCACA+GGG 0.650088 2_4:-39726880 Msa0327780:intron
CCTGCATAATGCTCCCAGGA+CGG 0.650448 2_4:+39727014 None:intergenic
CATCGCGTATGACATTCTGC+AGG 0.653326 2_4:+39735227 None:intergenic
GACATTCTGCAGGACTTGGT+AGG 0.653628 2_4:+39735237 None:intergenic
TCTTTAGTGAGAATCGTCGA+TGG 0.658594 2_4:+39734983 None:intergenic
GGAAAGGGCCGTCACAACTG+CGG 0.659297 2_4:-39732670 Msa0327780:CDS
CAGGGCTATGAATGTCAAGG+TGG 0.661008 2_4:-39728185 Msa0327780:CDS
TCAGGTGACTGGTATATACA+GGG 0.661864 2_4:-39728203 Msa0327780:intron
AATAGTAAGCTAACAGTGTG+AGG 0.667908 2_4:+39728350 None:intergenic
GGAAAGCATTACACACCAAG+AGG 0.670420 2_4:-39729264 Msa0327780:intron
TCTCTCTTACTCTTCCTCAC+CGG 0.671004 2_4:+39732632 None:intergenic
AGGGCTATGAATGTCAAGGT+GGG 0.671069 2_4:-39728184 Msa0327780:CDS
AGAAGGGAAGATGATCTTGG+TGG 0.671197 2_4:-39727037 Msa0327780:CDS
CAATATAAGAACCACACCAG+AGG 0.676256 2_4:-39729418 Msa0327780:CDS
CTTAACCCAGACATTTGCCG+CGG 0.676329 2_4:-39729344 Msa0327780:CDS
CTTCCCAATAGACAACAGTA+CGG 0.678240 2_4:+39735035 None:intergenic
GACACCTGACGAGATACCTG+AGG 0.684151 2_4:-39728381 Msa0327780:CDS
GGGTTCCTAACACACCAAAG+TGG 0.688027 2_4:+39734482 None:intergenic
ACACCTGACGAGATACCTGA+GGG 0.690721 2_4:-39728380 Msa0327780:CDS
ATTCAAGCGGTATCTGACTG+AGG 0.705680 2_4:-39730531 Msa0327780:CDS
GAAGTCTGATGATGACACGA+TGG 0.708731 2_4:+39734889 None:intergenic
GGGTTTGAAGCGATACACAG+AGG 0.714644 2_4:-39734573 Msa0327780:CDS
AGAAGCAGAATGGTGAACAG+AGG 0.721002 2_4:-39734527 Msa0327780:CDS
CATGTGCTAACATGTTCTGG+TGG 0.723594 2_4:-39735336 None:intergenic
TAGGTGGGGAGGTAGCGTTG+TGG 0.723910 2_4:-39734691 Msa0327780:CDS
CCTGACGAGATACCTGAGGG+AGG 0.736290 2_4:-39728377 Msa0327780:CDS
AAATTGTTCCGGGAACAATG+TGG 0.768274 2_4:+39735201 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTACTTTTAATC+TGG - chr2_4:39727251-39727270 Msa0327780:intron 10.0%
!!! TGTTATTAATATGTTTTATT+TGG - chr2_4:39730799-39730818 Msa0327780:intron 10.0%
!!! TTACTGAAATTGATAATTTT+AGG - chr2_4:39728537-39728556 Msa0327780:intron 15.0%
!!! ATTTTTGTTTTGTTTTGTTT+TGG - chr2_4:39728700-39728719 Msa0327780:intron 15.0%
!!! ATTTTTGTTTTGTTTTGTTT+TGG - chr2_4:39728700-39728719 Msa0327780:intron 15.0%
!! TGAAAAGAAAGAAAAAAAAA+GGG - chr2_4:39728776-39728795 Msa0327780:intron 15.0%
!! AAGTAACTAAAGAAAAATTA+GGG - chr2_4:39729103-39729122 Msa0327780:intron 15.0%
!! TAATCTAAATCAACTAATTT+AGG - chr2_4:39729248-39729267 Msa0327780:intron 15.0%
!! AATCTAAATCAACTAATTTA+GGG - chr2_4:39729249-39729268 Msa0327780:intron 15.0%
!! ATTCTTATTGTATATGAAAA+AGG - chr2_4:39729466-39729485 Msa0327780:CDS 15.0%
!!! ATTGATTTTGAATTTTTAGA+CGG - chr2_4:39729564-39729583 Msa0327780:intron 15.0%
!! TATAACTTACATATTTGAAA+TGG + chr2_4:39730336-39730355 None:intergenic 15.0%
!!! TGGTTATATACTTTTTTTAT+AGG - chr2_4:39731727-39731746 Msa0327780:intron 15.0%
!!! ATTTAAAACAGATGAATTAA+AGG + chr2_4:39731969-39731988 None:intergenic 15.0%
!!! TTCTTATTTTATATCAAATG+AGG + chr2_4:39732522-39732541 None:intergenic 15.0%
!!! TTTTTTTTTGCTAAATTAGA+CGG - chr2_4:39732812-39732831 Msa0327780:intron 15.0%
!! AATAATTATTTAAACTGTAC+TGG - chr2_4:39732911-39732930 Msa0327780:CDS 15.0%
!! ATAATTATTTAAACTGTACT+GGG - chr2_4:39732912-39732931 Msa0327780:CDS 15.0%
!! ATCAATATATTTATCATACA+AGG + chr2_4:39733539-39733558 None:intergenic 15.0%
!! ATATATAAGTAATTACTTGA+TGG + chr2_4:39734557-39734576 None:intergenic 15.0%
!! TTCATAGCTATTATTATATT+TGG - chr2_4:39734919-39734938 Msa0327780:CDS 15.0%
!! CAGAAATTTCTATCAAATAA+TGG - chr2_4:39726383-39726402 Msa0327780:three_prime_UTR 20.0%
!!! ACATTTGTAGTTAGTTTAAT+TGG - chr2_4:39727161-39727180 Msa0327780:intron 20.0%
!!! TGAAACAATAAATTTTCAGT+AGG + chr2_4:39727302-39727321 None:intergenic 20.0%
!! TCATATATGCAAATTCAATT+AGG - chr2_4:39727580-39727599 Msa0327780:intron 20.0%
!! TTAGATATTGAATCTTAGTT+CGG + chr2_4:39727947-39727966 None:intergenic 20.0%
!! TGAGTGTTTATACTATATAT+AGG - chr2_4:39728173-39728192 Msa0327780:CDS 20.0%
!! TTTAATTAAACCTAATTACC+TGG + chr2_4:39728495-39728514 None:intergenic 20.0%
!! GTGAAAAGAAAGAAAAAAAA+AGG - chr2_4:39728775-39728794 Msa0327780:intron 20.0%
!! GAAAAGAAAGAAAAAAAAAG+GGG - chr2_4:39728777-39728796 Msa0327780:intron 20.0%
!! GAAGTAACTAAAGAAAAATT+AGG - chr2_4:39729102-39729121 Msa0327780:intron 20.0%
!! AGTAACTAAAGAAAAATTAG+GGG - chr2_4:39729104-39729123 Msa0327780:intron 20.0%
!! ATCTAAATCAACTAATTTAG+GGG - chr2_4:39729250-39729269 Msa0327780:intron 20.0%
!!! TTGATTTTGAATTTTTAGAC+GGG - chr2_4:39729565-39729584 Msa0327780:intron 20.0%
!! GAAATTGATTACTTTGAATT+TGG - chr2_4:39729738-39729757 Msa0327780:intron 20.0%
!! ATTACTTTGAATTTGGATAT+GGG - chr2_4:39729745-39729764 Msa0327780:intron 20.0%
!!! ATCTAAGATTTGATATGTTA+TGG - chr2_4:39730033-39730052 Msa0327780:CDS 20.0%
!! ATATTTGTTTATACGCTTAA+AGG + chr2_4:39730113-39730132 None:intergenic 20.0%
!! TACCAAACTAAATATAAACA+TGG - chr2_4:39730354-39730373 Msa0327780:intron 20.0%
!! ATCCATGTTTATATTTAGTT+TGG + chr2_4:39730359-39730378 None:intergenic 20.0%
!! AAAATTTCCAAGATAATATC+CGG + chr2_4:39730382-39730401 None:intergenic 20.0%
!! CAAAATAAAAAAAAGTGACA+GGG + chr2_4:39730498-39730517 None:intergenic 20.0%
!! TCAAAATAAAAAAAAGTGAC+AGG + chr2_4:39730499-39730518 None:intergenic 20.0%
!!! AATGATTTTCTTGATTACTA+AGG - chr2_4:39730635-39730654 Msa0327780:intron 20.0%
!! TTATTTGGTATGATGATTAA+AGG - chr2_4:39730814-39730833 Msa0327780:intron 20.0%
!!! TCTATTTTCATAAGCTATAT+TGG - chr2_4:39731148-39731167 Msa0327780:intron 20.0%
!!! GTAAAGTGCTTTATTTAAAA+TGG - chr2_4:39731325-39731344 Msa0327780:intron 20.0%
!! CAAAAATTAGATTTGAGAAT+CGG + chr2_4:39731413-39731432 None:intergenic 20.0%
!!! CACTTTTTATGATCTTAAAA+TGG - chr2_4:39731539-39731558 Msa0327780:intron 20.0%
!!! TTTCTACTTATATTTAAGGT+CGG + chr2_4:39731783-39731802 None:intergenic 20.0%
!! AACCTTTCTACTTATATTTA+AGG + chr2_4:39731787-39731806 None:intergenic 20.0%
!!! GATACTTTATTTAGTACAAA+AGG + chr2_4:39732385-39732404 None:intergenic 20.0%
!! TTGACTTTGATGTTATATAT+TGG + chr2_4:39732409-39732428 None:intergenic 20.0%
!!! AGATTTTTAAGTATTTGAGA+TGG - chr2_4:39732694-39732713 Msa0327780:CDS 20.0%
!! AAAACACATTGTTCAAAATA+GGG + chr2_4:39732980-39732999 None:intergenic 20.0%
!!! AACATATCTTTTCTAATTTC+AGG - chr2_4:39733068-39733087 Msa0327780:intron 20.0%
!! TTACTGATAAACAAATTATG+AGG - chr2_4:39733092-39733111 Msa0327780:intron 20.0%
!! ATAAATATATTGATGAGCAT+GGG - chr2_4:39733545-39733564 Msa0327780:intron 20.0%
!!! TATGTGTTGTTTAATTTTTC+AGG - chr2_4:39733744-39733763 Msa0327780:intron 20.0%
!!! GAAGAAAGGTTTTAAAATTT+TGG - chr2_4:39733995-39734014 Msa0327780:intron 20.0%
!! AAATCCATGATTTACTAAAA+AGG + chr2_4:39734800-39734819 None:intergenic 20.0%
!! TTAACAGTAAAAGATTAGAA+TGG + chr2_4:39734960-39734979 None:intergenic 20.0%
!! TTGTAATTGTATATAACCTT+AGG - chr2_4:39735214-39735233 Msa0327780:CDS 20.0%
!!! TGAATCCATTGATTTTAATT+AGG + chr2_4:39735259-39735278 None:intergenic 20.0%
!!! CATATCAATTTTTCTTAACT+GGG + chr2_4:39735314-39735333 None:intergenic 20.0%
! AAATTTCTGAATTGTTGGAT+CGG + chr2_4:39726372-39726391 None:intergenic 25.0%
! GATAGAAATTTCTGAATTGT+TGG + chr2_4:39726377-39726396 None:intergenic 25.0%
!!! ATAGTTTGCCATGTTTTAAA+AGG + chr2_4:39726740-39726759 None:intergenic 25.0%
! AAACTAACTACAAATGTGTT+TGG + chr2_4:39727158-39727177 None:intergenic 25.0%
! AGTTATCAAACAATGTTACA+TGG - chr2_4:39727336-39727355 Msa0327780:intron 25.0%
! CAACATCAATACTAAACATA+TGG + chr2_4:39727507-39727526 None:intergenic 25.0%
!!! CATATGTTTAGTATTGATGT+TGG - chr2_4:39727505-39727524 Msa0327780:intron 25.0%
! CATGAACAAGAATTTAACAA+AGG + chr2_4:39727699-39727718 None:intergenic 25.0%
!!! ACATATGACTTTTTTCAGTA+TGG + chr2_4:39727733-39727752 None:intergenic 25.0%
! AGTTTAGTAGATTTAAGCTA+AGG + chr2_4:39728079-39728098 None:intergenic 25.0%
!!! CATTTTGGTAAATTGGTAAT+TGG - chr2_4:39728150-39728169 Msa0327780:CDS 25.0%
! TGATGATTAATTCATCATGA+GGG + chr2_4:39728388-39728407 None:intergenic 25.0%
!! TTGATGATTAATTCATCATG+AGG + chr2_4:39728389-39728408 None:intergenic 25.0%
! TGAATGAATTGAAAGATTGA+AGG + chr2_4:39728470-39728489 None:intergenic 25.0%
!!! TTTTGTTTTGTTTTGGATTG+TGG - chr2_4:39728707-39728726 Msa0327780:intron 25.0%
! GTTTGATTGAAAATTTGTGA+TGG - chr2_4:39728977-39728996 Msa0327780:intron 25.0%
! TTGATTTAGATTATGCATGA+GGG + chr2_4:39729241-39729260 None:intergenic 25.0%
! ATTCAATCAAATTATTCCAG+TGG + chr2_4:39729428-39729447 None:intergenic 25.0%
! ACTGGAATAATTTGATTGAA+TGG - chr2_4:39729427-39729446 Msa0327780:CDS 25.0%
! CTGGAATAATTTGATTGAAT+GGG - chr2_4:39729428-39729447 Msa0327780:CDS 25.0%
!!! ATTTGATTGAATGGGTTTTA+TGG - chr2_4:39729436-39729455 Msa0327780:CDS 25.0%
! CATATGAATGATTCAATCAT+AGG - chr2_4:39729654-39729673 Msa0327780:intron 25.0%
!! TGATTCAATCATAGGTTTTA+TGG - chr2_4:39729662-39729681 Msa0327780:intron 25.0%
! GATTACTTTGAATTTGGATA+TGG - chr2_4:39729744-39729763 Msa0327780:intron 25.0%
! ATTGAGTGAATTATATGTTC+AGG - chr2_4:39729914-39729933 Msa0327780:intron 25.0%
!! AACCTTTTTATTCACTATGT+TGG + chr2_4:39730002-39730021 None:intergenic 25.0%
! ACTAAATATAAACATGGATC+CGG - chr2_4:39730360-39730379 Msa0327780:intron 25.0%
!! TCAAGAAAATCATTCTTTTG+AGG + chr2_4:39730629-39730648 None:intergenic 25.0%
!!! TTTGTTTTGTTGTTTGATTG+TGG - chr2_4:39730699-39730718 Msa0327780:intron 25.0%
! ATGATTAAAGGAAACTGATA+AGG - chr2_4:39730826-39730845 Msa0327780:intron 25.0%
! ACTTATATGATAAGTGTGAA+TGG + chr2_4:39731060-39731079 None:intergenic 25.0%
! GACCTTAAATATAAGTAGAA+AGG - chr2_4:39731782-39731801 Msa0327780:intron 25.0%
!!! ACAAATACATGTACCTTTTT+TGG - chr2_4:39731819-39731838 Msa0327780:intron 25.0%
!!! ACCTTTTTTGGTCAAATATA+AGG - chr2_4:39731831-39731850 Msa0327780:intron 25.0%
! ACTTTCTTCTCAAAATCATT+TGG - chr2_4:39731895-39731914 Msa0327780:intron 25.0%
! CTTTCTTCTCAAAATCATTT+GGG - chr2_4:39731896-39731915 Msa0327780:intron 25.0%
! ATAACATCAAAGTCAATAGT+AGG - chr2_4:39732413-39732432 Msa0327780:intron 25.0%
!! TCTCAATGACTACAAAATTT+TGG - chr2_4:39732482-39732501 Msa0327780:intron 25.0%
!!! CTTGTTATTATGCATCATAT+AGG + chr2_4:39732664-39732683 None:intergenic 25.0%
! TAAAAGAGATGGGAAAATAT+TGG + chr2_4:39732727-39732746 None:intergenic 25.0%
! AAACACATTGTTCAAAATAG+GGG + chr2_4:39732979-39732998 None:intergenic 25.0%
! CAAAACACATTGTTCAAAAT+AGG + chr2_4:39732981-39733000 None:intergenic 25.0%
!!! CTATTTTGAACAATGTGTTT+TGG - chr2_4:39732979-39732998 Msa0327780:intron 25.0%
! ATATTCTCATGTTTGTTCAA+TGG - chr2_4:39733255-39733274 Msa0327780:intron 25.0%
! GATTCATTTCATTGTTCTAA+AGG - chr2_4:39733486-39733505 Msa0327780:intron 25.0%
! GATAAATATATTGATGAGCA+TGG - chr2_4:39733544-39733563 Msa0327780:intron 25.0%
! TAAATATATTGATGAGCATG+GGG - chr2_4:39733546-39733565 Msa0327780:intron 25.0%
! TGTTTAAGAATCCGAAAAAA+GGG - chr2_4:39734159-39734178 Msa0327780:intron 25.0%
! CTGTATTGTGAAATCTTTAA+AGG - chr2_4:39734327-39734346 Msa0327780:intron 25.0%
! GAAAAAAATCTGATTGGTAA+AGG + chr2_4:39734361-39734380 None:intergenic 25.0%
! GTGAATGAAAAAAATCTGAT+TGG + chr2_4:39734367-39734386 None:intergenic 25.0%
! CATAAAAGCAAATAGATAAG+TGG + chr2_4:39734414-39734433 None:intergenic 25.0%
!!! TCTATTTGCTTTTATGCAAA+TGG - chr2_4:39734418-39734437 Msa0327780:intron 25.0%
! ATGTTTACAATGAAAAACTC+AGG + chr2_4:39734654-39734673 None:intergenic 25.0%
!! TTTTTCATTGTAAACATCTG+TGG - chr2_4:39734657-39734676 Msa0327780:CDS 25.0%
! TAAGAAAAGAAGGATTCAAA+GGG + chr2_4:39734692-39734711 None:intergenic 25.0%
! TTAAGAAAAGAAGGATTCAA+AGG + chr2_4:39734693-39734712 None:intergenic 25.0%
! AAAGAAACCTACTTTAGATA+TGG + chr2_4:39734729-39734748 None:intergenic 25.0%
!!! CTTTCCTTTTTAGTAAATCA+TGG - chr2_4:39734793-39734812 Msa0327780:CDS 25.0%
! TTAATCATGAAATTGCAAGT+TGG - chr2_4:39734818-39734837 Msa0327780:CDS 25.0%
! AATTAATCAAAGTTCTCAAG+TGG - chr2_4:39734881-39734900 Msa0327780:CDS 25.0%
!!! CATTGATTTTAATTAGGCAA+AGG + chr2_4:39735253-39735272 None:intergenic 25.0%
! CTTTGCCTAATTAAAATCAA+TGG - chr2_4:39735251-39735270 Msa0327780:CDS 25.0%
!! GCATATCAATTTTTCTTAAC+TGG + chr2_4:39735315-39735334 None:intergenic 25.0%
ACTAAAAGGATAGTATCTTC+TGG - chr2_4:39726584-39726603 Msa0327780:intron 30.0%
CAACAGATAGATTGAATGAA+TGG - chr2_4:39726954-39726973 Msa0327780:intron 30.0%
ATTGTGAACTCTATTGCTAT+TGG + chr2_4:39727561-39727580 None:intergenic 30.0%
! ATTAGGAGCATATTGCATAT+TGG - chr2_4:39727597-39727616 Msa0327780:intron 30.0%
TATTGCATATTGGATTGAAG+AGG - chr2_4:39727607-39727626 Msa0327780:intron 30.0%
!!! ATTCTGAAGCTATCTTTTGT+GGG + chr2_4:39727796-39727815 None:intergenic 30.0%
!!! TCTTTTCTTTTTTGACCATG+AGG + chr2_4:39727871-39727890 None:intergenic 30.0%
! TTGACCATTTTACCCTTATT+AGG - chr2_4:39728125-39728144 Msa0327780:intron 30.0%
! TGACCATTTTACCCTTATTA+GGG - chr2_4:39728126-39728145 Msa0327780:intron 30.0%
! TTTGCATGATGATTTTCATG+GGG + chr2_4:39728352-39728371 None:intergenic 30.0%
! GTTTGCATGATGATTTTCAT+GGG + chr2_4:39728353-39728372 None:intergenic 30.0%
! AGTTTGCATGATGATTTTCA+TGG + chr2_4:39728354-39728373 None:intergenic 30.0%
AATTGAAAGATTGAAGGATG+GGG + chr2_4:39728464-39728483 None:intergenic 30.0%
GAATTGAAAGATTGAAGGAT+GGG + chr2_4:39728465-39728484 None:intergenic 30.0%
TGAATTGAAAGATTGAAGGA+TGG + chr2_4:39728466-39728485 None:intergenic 30.0%
TCTTTCAATTCATTCATTCC+AGG - chr2_4:39728474-39728493 Msa0327780:intron 30.0%
TTCATTCATTCCAGGTAATT+AGG - chr2_4:39728482-39728501 Msa0327780:intron 30.0%
!!! AGGTTTGATGCTTTTGATTT+TGG - chr2_4:39728557-39728576 Msa0327780:intron 30.0%
ATCTGTAGAAGTAAAGTGAT+AGG - chr2_4:39728585-39728604 Msa0327780:intron 30.0%
TGTGATAGATAGATTGTTGA+AGG - chr2_4:39728649-39728668 Msa0327780:intron 30.0%
AGAAAAAAAAAGGGGAGAAA+CGG - chr2_4:39728785-39728804 Msa0327780:intron 30.0%
TCTAATTCTAATCTTGCATG+TGG - chr2_4:39728954-39728973 Msa0327780:intron 30.0%
CTAATTCTAATCTTGCATGT+GGG - chr2_4:39728955-39728974 Msa0327780:intron 30.0%
TGTGAGAAGAATGTTAAGTT+TGG - chr2_4:39729003-39729022 Msa0327780:intron 30.0%
GTGAGAAGAATGTTAAGTTT+GGG - chr2_4:39729004-39729023 Msa0327780:intron 30.0%
AATGTTAAGTTTGGGTAAGA+GGG - chr2_4:39729012-39729031 Msa0327780:intron 30.0%
AGAGTAGAAGAAATGGAATT+AGG - chr2_4:39729065-39729084 Msa0327780:intron 30.0%
GAGTAGAAGAAATGGAATTA+GGG - chr2_4:39729066-39729085 Msa0327780:intron 30.0%
CCTTTAATTCTTTATGGTGA+TGG + chr2_4:39729198-39729217 None:intergenic 30.0%
CCATCACCATAAAGAATTAA+AGG - chr2_4:39729195-39729214 Msa0327780:intron 30.0%
TCACCATAAAGAATTAAAGG+TGG - chr2_4:39729198-39729217 Msa0327780:intron 30.0%
CACCATAAAGAATTAAAGGT+GGG - chr2_4:39729199-39729218 Msa0327780:intron 30.0%
AACCCACCTTTAATTCTTTA+TGG + chr2_4:39729204-39729223 None:intergenic 30.0%
! GTTGATTTAGATTATGCATG+AGG + chr2_4:39729242-39729261 None:intergenic 30.0%
TGAATGATAGCATGATTGAA+AGG - chr2_4:39729389-39729408 Msa0327780:CDS 30.0%
GGAGATTATAAAAATGAGCT+AGG - chr2_4:39729487-39729506 Msa0327780:intron 30.0%
!! TTTATTGCAGCAGTTGATAA+AGG - chr2_4:39729960-39729979 Msa0327780:intron 30.0%
TGCCAACATAGTGAATAAAA+AGG - chr2_4:39729997-39730016 Msa0327780:intron 30.0%
TCTCGCATAAACATATATGT+TGG - chr2_4:39730207-39730226 Msa0327780:intron 30.0%
! TCTTTGAAAGAGTTGCTTTA+TGG - chr2_4:39730275-39730294 Msa0327780:intron 30.0%
!! AATGTTTTCTGTTACTTGAC+AGG - chr2_4:39730522-39730541 Msa0327780:CDS 30.0%
!! ATGTTTTCTGTTACTTGACA+GGG - chr2_4:39730523-39730542 Msa0327780:CDS 30.0%
!!! TTGTTGTTTGATTGTGGTTT+TGG - chr2_4:39730705-39730724 Msa0327780:intron 30.0%
TTAAAGGAAACTGATAAGGT+TGG - chr2_4:39730830-39730849 Msa0327780:intron 30.0%
CTTTAACAAGATCATTCAAG+CGG - chr2_4:39730960-39730979 Msa0327780:CDS 30.0%
!! AACAATCCTAGAAGTGTTTA+TGG - chr2_4:39731239-39731258 Msa0327780:intron 30.0%
TAATTAGACCATGTTTGGAT+TGG + chr2_4:39731286-39731305 None:intergenic 30.0%
ACAGATAATTAGACCATGTT+TGG + chr2_4:39731291-39731310 None:intergenic 30.0%
TATAGAATCGATCACTATCT+TGG - chr2_4:39731357-39731376 Msa0327780:intron 30.0%
! ATCTAATTTTTGACCCTTTG+TGG - chr2_4:39731421-39731440 Msa0327780:intron 30.0%
! TTGATATTCTCAGCAGATTT+TGG - chr2_4:39731471-39731490 Msa0327780:intron 30.0%
! AAAAAGTGTAAATGCTGCAA+AGG + chr2_4:39731527-39731546 None:intergenic 30.0%
TGTAGGTACTTTGACAATTA+TGG - chr2_4:39731593-39731612 Msa0327780:intron 30.0%
AGAGGACATTAGAAATGAAA+AGG - chr2_4:39731697-39731716 Msa0327780:intron 30.0%
! TACTTATATTTAAGGTCGGA+GGG + chr2_4:39731779-39731798 None:intergenic 30.0%
GCCTTATATTTGACCAAAAA+AGG + chr2_4:39731835-39731854 None:intergenic 30.0%
!! TTTTTGGTCAAATATAAGGC+CGG - chr2_4:39731835-39731854 Msa0327780:intron 30.0%
CATGACTTTCAATTGCTTAA+TGG - chr2_4:39732002-39732021 Msa0327780:intron 30.0%
!! TACAGTTTTGTCATCAATGT+AGG + chr2_4:39732129-39732148 None:intergenic 30.0%
TCTTGCATTATCTATGAAGT+GGG + chr2_4:39732189-39732208 None:intergenic 30.0%
ATCTTGCATTATCTATGAAG+TGG + chr2_4:39732190-39732209 None:intergenic 30.0%
ACTTCATAGATAATGCAAGA+TGG - chr2_4:39732189-39732208 Msa0327780:intron 30.0%
CTTCATAGATAATGCAAGAT+GGG - chr2_4:39732190-39732209 Msa0327780:intron 30.0%
TGTATTCTGTATTGTGACAT+TGG + chr2_4:39732461-39732480 None:intergenic 30.0%
TAACCAAGAAACACTTATTC+TGG + chr2_4:39732787-39732806 None:intergenic 30.0%
!! GGTAGATTTTAGTGATAAGT+TGG - chr2_4:39732933-39732952 Msa0327780:CDS 30.0%
! TTTAGTGATAAGTTGGATGA+TGG - chr2_4:39732940-39732959 Msa0327780:CDS 30.0%
!!! TGGATTTTAGTTCATAAACC+TGG - chr2_4:39733034-39733053 Msa0327780:intron 30.0%
ATATGTTAATTGCAGTTTCC+AGG + chr2_4:39733055-39733074 None:intergenic 30.0%
TAAACAAATTATGAGGCTTC+AGG - chr2_4:39733099-39733118 Msa0327780:intron 30.0%
! ATCTATTTATCAGAGTGTCA+TGG + chr2_4:39733237-39733256 None:intergenic 30.0%
ATGTACAACAAAACACTCAT+GGG + chr2_4:39733282-39733301 None:intergenic 30.0%
AGACAAGATGAAAAATGCAA+AGG + chr2_4:39733422-39733441 None:intergenic 30.0%
! TGAATCATGCCAACTTTTAA+GGG + chr2_4:39733472-39733491 None:intergenic 30.0%
! ATGAATCATGCCAACTTTTA+AGG + chr2_4:39733473-39733492 None:intergenic 30.0%
! AAAATGTGTTGCTATCATGA+AGG - chr2_4:39733510-39733529 Msa0327780:intron 30.0%
AACAATTGACAACAAATGCA+GGG + chr2_4:39733704-39733723 None:intergenic 30.0%
AAACAATTGACAACAAATGC+AGG + chr2_4:39733705-39733724 None:intergenic 30.0%
!! TTTTCAGGAAATATACAGTC+TGG - chr2_4:39733759-39733778 Msa0327780:intron 30.0%
ATCGAAAATTTAAACAGCGT+TGG - chr2_4:39733806-39733825 Msa0327780:intron 30.0%
GTTGGTTATCTACTCAAAAA+AGG - chr2_4:39733824-39733843 Msa0327780:intron 30.0%
AGAGTTGCACATTAATAAGA+TGG + chr2_4:39733916-39733935 None:intergenic 30.0%
TATTATCCTCTTTGTACTCA+CGG - chr2_4:39734048-39734067 Msa0327780:intron 30.0%
GTGTTTAAGAATCCGAAAAA+AGG - chr2_4:39734158-39734177 Msa0327780:intron 30.0%
! AGCACATTCTTAAAGTATTC+CGG + chr2_4:39734216-39734235 None:intergenic 30.0%
TCATCGAATATGCAATTTCA+AGG - chr2_4:39734253-39734272 Msa0327780:intron 30.0%
CATCGAATATGCAATTTCAA+GGG - chr2_4:39734254-39734273 Msa0327780:intron 30.0%
ATCGAATATGCAATTTCAAG+GGG - chr2_4:39734255-39734274 Msa0327780:intron 30.0%
AGCAAATAGATAAGTGGTTA+AGG + chr2_4:39734408-39734427 None:intergenic 30.0%
GTCATGATCTTAAGAAAAGA+AGG + chr2_4:39734702-39734721 None:intergenic 30.0%
!! CTAATCTGAGTCTTTGAAAT+TGG - chr2_4:39734841-39734860 Msa0327780:CDS 30.0%
! CAATTTTTCTTAACTGGGTT+CGG + chr2_4:39735309-39735328 None:intergenic 30.0%
CAGAATGGTAAAATTGTTCC+GGG + chr2_4:39726316-39726335 None:intergenic 35.0%
CCAGAATGGTAAAATTGTTC+CGG + chr2_4:39726317-39726336 None:intergenic 35.0%
! TGTTGTTGATAAACGTCTCA+AGG + chr2_4:39726424-39726443 None:intergenic 35.0%
GGTTGAGGGATAAAATGAAA+GGG + chr2_4:39726451-39726470 None:intergenic 35.0%
! AACATGTGATTTTGCAGACA+TGG - chr2_4:39726543-39726562 Msa0327780:intron 35.0%
! ATTTTGCAGACATGGAACAA+TGG - chr2_4:39726551-39726570 Msa0327780:intron 35.0%
ATGGACATGACAACACTAAA+AGG - chr2_4:39726570-39726589 Msa0327780:intron 35.0%
GACTTCTATTATCTTGACTG+TGG - chr2_4:39726632-39726651 Msa0327780:intron 35.0%
TATTATCTTGACTGTGGACA+CGG - chr2_4:39726638-39726657 Msa0327780:intron 35.0%
AGTATTTACGACAACCAAAC+AGG - chr2_4:39726680-39726699 Msa0327780:intron 35.0%
AACCAATTTCGCTTCTTCTT+CGG + chr2_4:39726792-39726811 None:intergenic 35.0%
!!! GAAGAAGCGAAATTGGTTTT+AGG - chr2_4:39726794-39726813 Msa0327780:CDS 35.0%
!!! AAGCGAAATTGGTTTTAGGT+GGG - chr2_4:39726798-39726817 Msa0327780:CDS 35.0%
CGAATCCAAAACAGTTTCAT+CGG + chr2_4:39726849-39726868 None:intergenic 35.0%
!! CATGCCATTTAGTTTGTGTT+TGG - chr2_4:39727064-39727083 Msa0327780:CDS 35.0%
CTCTCCAAACACAAACTAAA+TGG + chr2_4:39727071-39727090 None:intergenic 35.0%
! TAGCTCTTTTTCCATTTGAG+AGG + chr2_4:39727219-39727238 None:intergenic 35.0%
AAATTTCACCAAATGCTGCT+AGG - chr2_4:39727461-39727480 Msa0327780:intron 35.0%
AATTTCACCAAATGCTGCTA+GGG - chr2_4:39727462-39727481 Msa0327780:intron 35.0%
ACTAATCATGCACTAAGTTC+AGG - chr2_4:39727651-39727670 Msa0327780:intron 35.0%
!!! CATTCTGAAGCTATCTTTTG+TGG + chr2_4:39727797-39727816 None:intergenic 35.0%
AAGTGCACTTTAAATCCTCA+TGG - chr2_4:39727853-39727872 Msa0327780:intron 35.0%
! GACCATTTTACCCTTATTAG+GGG - chr2_4:39728127-39728146 Msa0327780:intron 35.0%
TACCAAAATGCCCCTAATAA+GGG + chr2_4:39728140-39728159 None:intergenic 35.0%
TTACCAAAATGCCCCTAATA+AGG + chr2_4:39728141-39728160 None:intergenic 35.0%
!!! TTAGGGGCATTTTGGTAAAT+TGG - chr2_4:39728143-39728162 Msa0327780:intron 35.0%
GGGGAAAATGATCTTAATTG+TGG + chr2_4:39728204-39728223 None:intergenic 35.0%
AGAGATGAGAGAGAAAATGA+GGG + chr2_4:39728225-39728244 None:intergenic 35.0%
! ATTTTCTCTCTCATCTCTCA+CGG - chr2_4:39728227-39728246 Msa0327780:intron 35.0%
! GTGAGGATTGTAGAATTTTG+GGG + chr2_4:39728324-39728343 None:intergenic 35.0%
! GGTGAGGATTGTAGAATTTT+GGG + chr2_4:39728325-39728344 None:intergenic 35.0%
! TGATGATTTTCATGGGGTTT+GGG + chr2_4:39728346-39728365 None:intergenic 35.0%
! ATGATGATTTTCATGGGGTT+TGG + chr2_4:39728347-39728366 None:intergenic 35.0%
TGGGAAATCTCTATTCATGA+AGG - chr2_4:39728620-39728639 Msa0327780:intron 35.0%
GAAAAAAAAAGGGGAGAAAC+GGG - chr2_4:39728786-39728805 Msa0327780:intron 35.0%
ATGCATGCATGACTTTAGAT+TGG + chr2_4:39728909-39728928 None:intergenic 35.0%
GAATGTTAAGTTTGGGTAAG+AGG - chr2_4:39729011-39729030 Msa0327780:intron 35.0%
!! GGTTTTCAAGACTGAGTAAT+TGG - chr2_4:39729125-39729144 Msa0327780:intron 35.0%
!! AGGTTTATTGATTTAGCCAC+TGG - chr2_4:39729409-39729428 Msa0327780:CDS 35.0%
ATAACTGCAACTTATGCAAC+TGG + chr2_4:39729592-39729611 None:intergenic 35.0%
CATAAGTTGCAGTTATAAGC+TGG - chr2_4:39729596-39729615 Msa0327780:intron 35.0%
ATAAAAGAAGCTTGCAGTTC+TGG + chr2_4:39729945-39729964 None:intergenic 35.0%
! TTGAGTTGTAAACTGTCAAC+GGG + chr2_4:39730175-39730194 None:intergenic 35.0%
! GTTGAGTTGTAAACTGTCAA+CGG + chr2_4:39730176-39730195 None:intergenic 35.0%
TTGACAGTTTACAACTCAAC+AGG - chr2_4:39730176-39730195 Msa0327780:intron 35.0%
TGACAGTTTACAACTCAACA+GGG - chr2_4:39730177-39730196 Msa0327780:intron 35.0%
!! ATTCTGAAGCGTGTAGAAAA+AGG - chr2_4:39730572-39730591 Msa0327780:intron 35.0%
ACTAAGGTAGCAGTTTATGT+TGG - chr2_4:39730651-39730670 Msa0327780:intron 35.0%
!! TAGCAGTTTATGTTGGTTTG+AGG - chr2_4:39730658-39730677 Msa0327780:intron 35.0%
TGAGGTTATGAGATGGTTAT+TGG - chr2_4:39730676-39730695 Msa0327780:intron 35.0%
!! ATAAGGTTGGTGAAGCAATA+TGG - chr2_4:39730843-39730862 Msa0327780:intron 35.0%
CAAATAGCTGAGAAGTTAGA+AGG - chr2_4:39730882-39730901 Msa0327780:intron 35.0%
! TGACTGAGGATCAAATTTTC+AGG - chr2_4:39730987-39731006 Msa0327780:intron 35.0%
AACTACACTTTGACTGTGTT+TGG - chr2_4:39731016-39731035 Msa0327780:intron 35.0%
!! ACACTTCTAGGATTGTTTGA+AGG + chr2_4:39731236-39731255 None:intergenic 35.0%
CAAACAATCCAATCCAAACA+TGG - chr2_4:39731275-39731294 Msa0327780:intron 35.0%
TTCATATCTGTTCCATGTGT+AGG - chr2_4:39731576-39731595 Msa0327780:intron 35.0%
! ATTGTCAAAGTACCTACACA+TGG + chr2_4:39731591-39731610 None:intergenic 35.0%
AATACTAGTCCTCTTTGCAA+TGG - chr2_4:39731652-39731671 Msa0327780:intron 35.0%
AATGGAAACTCCTGTTAGTT+TGG - chr2_4:39731670-39731689 Msa0327780:intron 35.0%
AGAAATGAAAAGGTCTCATG+TGG - chr2_4:39731707-39731726 Msa0327780:intron 35.0%
! CTACTTATATTTAAGGTCGG+AGG + chr2_4:39731780-39731799 None:intergenic 35.0%
!!! AAAGTCCAGGTTTTAAACTC+TGG + chr2_4:39731880-39731899 None:intergenic 35.0%
!! TGATTTTGAGAAGAAAGTCC+AGG + chr2_4:39731893-39731912 None:intergenic 35.0%
TCTTCTCAAAATCATTTGGG+TGG - chr2_4:39731899-39731918 Msa0327780:intron 35.0%
! TCAATTGCTTAATGGATGTC+AGG - chr2_4:39732010-39732029 Msa0327780:intron 35.0%
ACTACATCCTCGAGTTTAAT+CGG + chr2_4:39732059-39732078 None:intergenic 35.0%
! AAACTCGAGGATGTAGTTTT+AGG - chr2_4:39732062-39732081 Msa0327780:intron 35.0%
TGATGACAAAACTGTACCAA+AGG - chr2_4:39732133-39732152 Msa0327780:intron 35.0%
ATAGATAATGCAAGATGGGA+TGG - chr2_4:39732194-39732213 Msa0327780:intron 35.0%
TAGATAATGCAAGATGGGAT+GGG - chr2_4:39732195-39732214 Msa0327780:intron 35.0%
!!! TACCTTTTTTGATGAAGGCT+GGG - chr2_4:39732219-39732238 Msa0327780:intron 35.0%
TATTCCTTTCACTTACCTCT+TGG + chr2_4:39732258-39732277 None:intergenic 35.0%
TAGCAGATCGTGAAAATTTG+CGG - chr2_4:39732299-39732318 Msa0327780:intron 35.0%
!! TTGTGACATTGGTTTGATGT+TGG + chr2_4:39732450-39732469 None:intergenic 35.0%
GATCTCAGCTTAAAAGAGAT+GGG + chr2_4:39732737-39732756 None:intergenic 35.0%
TGATCTCAGCTTAAAAGAGA+TGG + chr2_4:39732738-39732757 None:intergenic 35.0%
! TCTCTTTTAAGCTGAGATCA+AGG - chr2_4:39732738-39732757 Msa0327780:intron 35.0%
! CTCTTTTAAGCTGAGATCAA+GGG - chr2_4:39732739-39732758 Msa0327780:intron 35.0%
ATGCCAGAATAAGTGTTTCT+TGG - chr2_4:39732781-39732800 Msa0327780:intron 35.0%
!! GTTTTGGTCATGTGACTATT+TGG - chr2_4:39732995-39733014 Msa0327780:intron 35.0%
!! TCATGTGACTATTTGGTGTA+AGG - chr2_4:39733002-39733021 Msa0327780:intron 35.0%
! TTGGTGTAAGGTTTTTCACT+TGG - chr2_4:39733014-39733033 Msa0327780:intron 35.0%
AATAGTAAGCTAACAGTGTG+AGG + chr2_4:39733157-39733176 None:intergenic 35.0%
CTTACTATTGCATGACAAAC+TGG - chr2_4:39733168-39733187 Msa0327780:intron 35.0%
GATGTACAACAAAACACTCA+TGG + chr2_4:39733283-39733302 None:intergenic 35.0%
!! TGAGTGTTTTGTTGTACATC+AGG - chr2_4:39733283-39733302 Msa0327780:intron 35.0%
GACTTAACAGTTCTCTTAGT+TGG + chr2_4:39733347-39733366 None:intergenic 35.0%
!!! GACATTTGTTTTGTTCCGTT+TGG - chr2_4:39733446-39733465 Msa0327780:intron 35.0%
!!! TTGTTGATTTTGGTTGAAGC+AGG - chr2_4:39733569-39733588 Msa0327780:intron 35.0%
!!! TGTTGATTTTGGTTGAAGCA+GGG - chr2_4:39733570-39733589 Msa0327780:intron 35.0%
TCTTAATAAGCAATCAGAGC+TGG - chr2_4:39733633-39733652 Msa0327780:intron 35.0%
!! TCGATGAAAGTATCCATATC+AGG + chr2_4:39733791-39733810 None:intergenic 35.0%
AAAAGGACCAAAGACATATC+AGG - chr2_4:39733841-39733860 Msa0327780:intron 35.0%
TCAAACAAACCTCTATAGAG+TGG + chr2_4:39733887-39733906 None:intergenic 35.0%
! GGTAAGGCATTATAGATTCT+TGG + chr2_4:39733947-39733966 None:intergenic 35.0%
TAATACCTGCATGTGTCAAA+AGG + chr2_4:39734033-39734052 None:intergenic 35.0%
!!! GATAAGGTACACCCTTTTTT+CGG + chr2_4:39734173-39734192 None:intergenic 35.0%
GGGAACTTTGGTATAAGATA+AGG + chr2_4:39734189-39734208 None:intergenic 35.0%
! TCTTAAAGTATTCCGGGAAA+GGG + chr2_4:39734209-39734228 None:intergenic 35.0%
! TTCTTAAAGTATTCCGGGAA+AGG + chr2_4:39734210-39734229 None:intergenic 35.0%
! GCACATTCTTAAAGTATTCC+GGG + chr2_4:39734215-39734234 None:intergenic 35.0%
AAATTAATGTTGTGCCTGTC+AGG - chr2_4:39735004-39735023 Msa0327780:CDS 35.0%
AATTAATGTTGTGCCTGTCA+GGG - chr2_4:39735005-39735024 Msa0327780:CDS 35.0%
TTGAAGATCAATGCACTTGA+AGG - chr2_4:39735091-39735110 Msa0327780:CDS 35.0%
TCTATAGCTGCAAATTGAAG+TGG + chr2_4:39735184-39735203 None:intergenic 35.0%
AGGCAACTTATAATTGCCTA+AGG + chr2_4:39735233-39735252 None:intergenic 35.0%
GGATTTAAATGACCTGTTCC+CGG + chr2_4:39726233-39726252 None:intergenic 40.0%
AAATTGTTCCGGGAACAATG+TGG + chr2_4:39726306-39726325 None:intergenic 40.0%
! CCGGAACAATTTTACCATTC+TGG - chr2_4:39726314-39726333 Msa0327780:three_prime_UTR 40.0%
TGATAAACGTCTCAAGGACT+TGG + chr2_4:39726418-39726437 None:intergenic 40.0%
CGGTTGAGGGATAAAATGAA+AGG + chr2_4:39726452-39726471 None:intergenic 40.0%
ATAGACAACAGTACGGTTGA+GGG + chr2_4:39726465-39726484 None:intergenic 40.0%
AATAGACAACAGTACGGTTG+AGG + chr2_4:39726466-39726485 None:intergenic 40.0%
TCAACCGTACTGTTGTCTAT+TGG - chr2_4:39726465-39726484 Msa0327780:CDS 40.0%
CAACCGTACTGTTGTCTATT+GGG - chr2_4:39726466-39726485 Msa0327780:CDS 40.0%
CTTCCCAATAGACAACAGTA+CGG + chr2_4:39726472-39726491 None:intergenic 40.0%
TCTTTAGTGAGAATCGTCGA+TGG + chr2_4:39726524-39726543 None:intergenic 40.0%
!! CGTTTTTGTCACTTCCTGTT+TGG + chr2_4:39726697-39726716 None:intergenic 40.0%
ACAGGAAGTGACAAAAACGA+TGG - chr2_4:39726698-39726717 Msa0327780:intron 40.0%
!!! GGTGTGGACCTTTTAAAACA+TGG - chr2_4:39726729-39726748 Msa0327780:intron 40.0%
!!! GAAGCGAAATTGGTTTTAGG+TGG - chr2_4:39726797-39726816 Msa0327780:CDS 40.0%
!!! AGCGAAATTGGTTTTAGGTG+GGG - chr2_4:39726799-39726818 Msa0327780:CDS 40.0%
! ACTAGCCGATGAAACTGTTT+TGG - chr2_4:39726841-39726860 Msa0327780:CDS 40.0%
TCAGGCAATAGGGATGAAAA+GGG - chr2_4:39726911-39726930 Msa0327780:intron 40.0%
GAATGAATGGAGAAGCAGAA+TGG - chr2_4:39726967-39726986 Msa0327780:intron 40.0%
! AGAATGGTGAACAGAGGTAT+AGG - chr2_4:39726983-39727002 Msa0327780:intron 40.0%
ACACACCAAAGTGGTTGAAT+AGG + chr2_4:39727016-39727035 None:intergenic 40.0%
! TTCAACCACTTTGGTGTGTT+AGG - chr2_4:39727017-39727036 Msa0327780:CDS 40.0%
GGAAATGCAGTGCAAATATC+AGG + chr2_4:39727137-39727156 None:intergenic 40.0%
! CTCTTTTTCCATTTGAGAGG+AGG + chr2_4:39727216-39727235 None:intergenic 40.0%
! ATTAGTGTTACTCTCCCTCA+CGG + chr2_4:39727637-39727656 None:intergenic 40.0%
TGCCCCTAATAAGGGTAAAA+TGG + chr2_4:39728132-39728151 None:intergenic 40.0%
!!! TACCCTTATTAGGGGCATTT+TGG - chr2_4:39728135-39728154 Msa0327780:intron 40.0%
AGATGAGAGAGAAAATGAGG+GGG + chr2_4:39728223-39728242 None:intergenic 40.0%
GAGATGAGAGAGAAAATGAG+GGG + chr2_4:39728224-39728243 None:intergenic 40.0%
GAGAGATGAGAGAGAAAATG+AGG + chr2_4:39728226-39728245 None:intergenic 40.0%
!!! ATTTTGGGGTTGAGAATGAG+AGG + chr2_4:39728310-39728329 None:intergenic 40.0%
! GGGTGAGGATTGTAGAATTT+TGG + chr2_4:39728326-39728345 None:intergenic 40.0%
AAGATTGAAGGATGGGGTTA+GGG + chr2_4:39728458-39728477 None:intergenic 40.0%
AAAGATTGAAGGATGGGGTT+AGG + chr2_4:39728459-39728478 None:intergenic 40.0%
AAAGTGATAGGAGAAGTTGC+TGG - chr2_4:39728597-39728616 Msa0327780:intron 40.0%
!!! GTTTTGTTTTGGATTGTGGC+TGG - chr2_4:39728711-39728730 Msa0327780:intron 40.0%
CATGCATGCATAATTCTCTC+TGG - chr2_4:39728918-39728937 Msa0327780:intron 40.0%
AGGGAGAAGAGTAGAAGAAA+TGG - chr2_4:39729058-39729077 Msa0327780:intron 40.0%
CAAGACTGAGTAATTGGAGA+TGG - chr2_4:39729131-39729150 Msa0327780:intron 40.0%
AGTAATTGGAGATGGAAGCT+AGG - chr2_4:39729139-39729158 Msa0327780:intron 40.0%
AGATGGAAGCTAGGAACTTA+AGG - chr2_4:39729148-39729167 Msa0327780:intron 40.0%
AGATTATGCATGAGGGATGA+GGG + chr2_4:39729234-39729253 None:intergenic 40.0%
TAGATTATGCATGAGGGATG+AGG + chr2_4:39729235-39729254 None:intergenic 40.0%
TCACACGAAGACAATGCATT+TGG + chr2_4:39729772-39729791 None:intergenic 40.0%
CATTGTCTTCGTGTGAGTAT+TGG - chr2_4:39729776-39729795 Msa0327780:intron 40.0%
TGAGTTGTAAACTGTCAACG+GGG + chr2_4:39730174-39730193 None:intergenic 40.0%
CATGGATCCGGATATTATCT+TGG - chr2_4:39730372-39730391 Msa0327780:intron 40.0%
TTGAAGAATGAGCAGCATGA+AGG + chr2_4:39730456-39730475 None:intergenic 40.0%
GTGACAGGGAACATATCATT+AGG + chr2_4:39730484-39730503 None:intergenic 40.0%
TGAAGCGTGTAGAAAAAGGT+TGG - chr2_4:39730576-39730595 Msa0327780:intron 40.0%
GAAGCGTGTAGAAAAAGGTT+GGG - chr2_4:39730577-39730596 Msa0327780:intron 40.0%
AAGCGTGTAGAAAAAGGTTG+GGG - chr2_4:39730578-39730597 Msa0327780:intron 40.0%
!! GTTGGTTTGAGGTTATGAGA+TGG - chr2_4:39730669-39730688 Msa0327780:intron 40.0%
TAGCTGAGAAGTTAGAAGGA+AGG - chr2_4:39730886-39730905 Msa0327780:intron 40.0%
AGCTGAGAAGTTAGAAGGAA+GGG - chr2_4:39730887-39730906 Msa0327780:intron 40.0%
TGATCTTGTTAAAGCAGCTG+AGG + chr2_4:39730954-39730973 None:intergenic 40.0%
CTATCTTGGAAAAGAGCTTG+TGG - chr2_4:39731371-39731390 Msa0327780:intron 40.0%
!! TCAGCAGATTTTGGTACTGA+AGG - chr2_4:39731480-39731499 Msa0327780:intron 40.0%
! TCCTGTTAGTTTGGATGTAG+AGG - chr2_4:39731679-39731698 Msa0327780:intron 40.0%
TCCTCTACATCCAAACTAAC+AGG + chr2_4:39731683-39731702 None:intergenic 40.0%
CTTCTAGCATATACATCCTC+CGG + chr2_4:39731857-39731876 None:intergenic 40.0%
! AGAAGCCAGAGTTTAAAACC+TGG - chr2_4:39731872-39731891 Msa0327780:intron 40.0%
TATGAGACCGATTAAACTCG+AGG - chr2_4:39732049-39732068 Msa0327780:intron 40.0%
CTCTGGTGTGGTTCTTATAT+TGG + chr2_4:39732088-39732107 None:intergenic 40.0%
CAATATAAGAACCACACCAG+AGG - chr2_4:39732086-39732105 Msa0327780:intron 40.0%
! GTTTTGTCATCAATGTAGGC+TGG + chr2_4:39732125-39732144 None:intergenic 40.0%
AGATAATGCAAGATGGGATG+GGG - chr2_4:39732196-39732215 Msa0327780:intron 40.0%
!!! TGGGGTACCTTTTTTGATGA+AGG - chr2_4:39732214-39732233 Msa0327780:intron 40.0%
!!! GTACCTTTTTTGATGAAGGC+TGG - chr2_4:39732218-39732237 Msa0327780:intron 40.0%
TTCCCAGCCTTCATCAAAAA+AGG + chr2_4:39732224-39732243 None:intergenic 40.0%
AAAATAGGGGCTAATGACCA+TGG + chr2_4:39732966-39732985 None:intergenic 40.0%
ACTATTGCATGACAAACTGG+TGG - chr2_4:39733171-39733190 Msa0327780:intron 40.0%
! TTTGTTGTACATCAGGTGAC+TGG - chr2_4:39733290-39733309 Msa0327780:intron 40.0%
ATCAGGTGACTGGTATATAC+AGG - chr2_4:39733300-39733319 Msa0327780:intron 40.0%
TCAGGTGACTGGTATATACA+GGG - chr2_4:39733301-39733320 Msa0327780:intron 40.0%
ATACAGGGCTATGAATGTCA+AGG - chr2_4:39733316-39733335 Msa0327780:intron 40.0%
!!! GTTGATTTTGGTTGAAGCAG+GGG - chr2_4:39733571-39733590 Msa0327780:intron 40.0%
!!! TTGATTTTGGTTGAAGCAGG+GGG - chr2_4:39733572-39733591 Msa0327780:intron 40.0%
! TTTTACGCTCCACTCTATAG+AGG - chr2_4:39733875-39733894 Msa0327780:intron 40.0%
AACCTTTCTTCCCCTTATAG+AGG + chr2_4:39733986-39734005 None:intergenic 40.0%
! ACAATCCTTTTGACACATGC+AGG - chr2_4:39734025-39734044 Msa0327780:intron 40.0%
TATACCAAAGTTCCCTTTCC+CGG - chr2_4:39734194-39734213 Msa0327780:intron 40.0%
ATTGGTTGAGATCTGACAGA+AGG - chr2_4:39734450-39734469 Msa0327780:intron 40.0%
TTGGTTGAGATCTGACAGAA+GGG - chr2_4:39734451-39734470 Msa0327780:intron 40.0%
! AGCATTATGCAGGTTGACTT+TGG - chr2_4:39734500-39734519 Msa0327780:CDS 40.0%
TTGCAGAAATATGCAGCACA+GGG - chr2_4:39734624-39734643 Msa0327780:CDS 40.0%
! GACTCTGCCATATCTAAAGT+AGG - chr2_4:39734719-39734738 Msa0327780:CDS 40.0%
TCAAAGTTCTCAAGTGGCAA+CGG - chr2_4:39734887-39734906 Msa0327780:CDS 40.0%
TCGGTGTGCAAAACAAAGTT+GGG + chr2_4:39735048-39735067 None:intergenic 40.0%
TTGTTGCTAATCTTCCACCT+CGG + chr2_4:39735067-39735086 None:intergenic 40.0%
TGGTAGGTCTTGGGGTTTAA+GGG + chr2_4:39726254-39726273 None:intergenic 45.0%
TTGGTAGGTCTTGGGGTTTA+AGG + chr2_4:39726255-39726274 None:intergenic 45.0%
GTATGACATTCTGCAGGACT+TGG + chr2_4:39726274-39726293 None:intergenic 45.0%
CGATGTAACCACATTGTTCC+CGG - chr2_4:39726295-39726314 Msa0327780:three_prime_UTR 45.0%
TGAGAATCGTCGATGGAACA+TGG + chr2_4:39726517-39726536 None:intergenic 45.0%
! GAAGTCTGATGATGACACGA+TGG + chr2_4:39726618-39726637 None:intergenic 45.0%
GGAAGTGACAAAAACGATGG+CGG - chr2_4:39726701-39726720 Msa0327780:intron 45.0%
GACCGAAGAAGAAGCGAAAT+TGG - chr2_4:39726787-39726806 Msa0327780:intron 45.0%
!!! GAAATTGGTTTTAGGTGGGG+AGG - chr2_4:39726802-39726821 Msa0327780:CDS 45.0%
!! CTGTTTTGGATTCGCGACTT+TGG - chr2_4:39726855-39726874 Msa0327780:CDS 45.0%
TTGGCCTAGAACTTCTGCAA+TGG - chr2_4:39726874-39726893 Msa0327780:CDS 45.0%
TCAGCCATTGCAGAAGTTCT+AGG + chr2_4:39726881-39726900 None:intergenic 45.0%
GTCAGGCAATAGGGATGAAA+AGG - chr2_4:39726910-39726929 Msa0327780:intron 45.0%
AGAAGCAGAATGGTGAACAG+AGG - chr2_4:39726977-39726996 Msa0327780:intron 45.0%
CTGAGCCTATTCAACCACTT+TGG - chr2_4:39727008-39727027 Msa0327780:CDS 45.0%
GTACTGTGTTGCACATACCA+GGG + chr2_4:39727045-39727064 None:intergenic 45.0%
TGTACTGTGTTGCACATACC+AGG + chr2_4:39727046-39727065 None:intergenic 45.0%
ACCAAACTCCTCCTCTCAAA+TGG - chr2_4:39727205-39727224 Msa0327780:intron 45.0%
TCCATTTGAGAGGAGGAGTT+TGG + chr2_4:39727209-39727228 None:intergenic 45.0%
TCAGTAGGCTCACACAAAGT+TGG + chr2_4:39727287-39727306 None:intergenic 45.0%
ATTGAAGAGGTAACCCGTGA+GGG - chr2_4:39727620-39727639 Msa0327780:intron 45.0%
! TTAGTGTTACTCTCCCTCAC+GGG + chr2_4:39727636-39727655 None:intergenic 45.0%
TCATGCACTAAGTTCAGGCT+TGG - chr2_4:39727656-39727675 Msa0327780:intron 45.0%
CATGCACTAAGTTCAGGCTT+GGG - chr2_4:39727657-39727676 Msa0327780:intron 45.0%
TGATGTGACGCTTCAACGAT+AGG + chr2_4:39727998-39728017 None:intergenic 45.0%
! ATTTTCATGGGGTTTGGGTG+AGG + chr2_4:39728341-39728360 None:intergenic 45.0%
CAGAACTGGAAGAGGAGAAA+AGG + chr2_4:39728424-39728443 None:intergenic 45.0%
AGTTTGGACAGAACTGGAAG+AGG + chr2_4:39728432-39728451 None:intergenic 45.0%
TGATAGGAGAAGTTGCTGGT+GGG - chr2_4:39728601-39728620 Msa0327780:intron 45.0%
AAAAAGGGGAGAAACGGGAA+CGG - chr2_4:39728791-39728810 Msa0327780:intron 45.0%
TCTCTCTTACTCTTCCTCAC+CGG + chr2_4:39728875-39728894 None:intergenic 45.0%
GAGGAAGAGTAAGAGAGAGA+CGG - chr2_4:39728877-39728896 Msa0327780:intron 45.0%
GCAGAAAATAGCTTCAGTGC+AGG - chr2_4:39729527-39729546 Msa0327780:intron 45.0%
! AAAGAAGCTTGCAGTTCTGG+AGG + chr2_4:39729942-39729961 None:intergenic 45.0%
!!! CGGGGTGGATTGCTTTTTTT+CGG + chr2_4:39730156-39730175 None:intergenic 45.0%
TGCAATGAGTTCTGCGTCTA+TGG - chr2_4:39730405-39730424 Msa0327780:intron 45.0%
GAATGAGCAGCATGAAGGAA+TGG + chr2_4:39730451-39730470 None:intergenic 45.0%
! CTGTTACTTGACAGGGATGT+TGG - chr2_4:39730530-39730549 Msa0327780:CDS 45.0%
GTAGAAAAAGGTTGGGGTCA+AGG - chr2_4:39730584-39730603 Msa0327780:intron 45.0%
GAGAAGTTAGAAGGAAGGGT+TGG - chr2_4:39730891-39730910 Msa0327780:intron 45.0%
ATTCAAGCGGTATCTGACTG+AGG - chr2_4:39730973-39730992 Msa0327780:intron 45.0%
GGATTGTTTGAAGGAGCTCA+AGG + chr2_4:39731227-39731246 None:intergenic 45.0%
CCACTGCCATAAACACTTCT+AGG + chr2_4:39731248-39731267 None:intergenic 45.0%
!! CCTAGAAGTGTTTATGGCAG+TGG - chr2_4:39731245-39731264 Msa0327780:intron 45.0%
! TTTTTGACCCTTTGTGGTCG+AGG - chr2_4:39731427-39731446 Msa0327780:intron 45.0%
TGTATTGCCTCGACCACAAA+GGG + chr2_4:39731437-39731456 None:intergenic 45.0%
ATGTATTGCCTCGACCACAA+AGG + chr2_4:39731438-39731457 None:intergenic 45.0%
!! GATTTTGGTACTGAAGGACG+TGG - chr2_4:39731486-39731505 Msa0327780:intron 45.0%
CAGGAGTTTCCATTGCAAAG+AGG + chr2_4:39731664-39731683 None:intergenic 45.0%
TTGGTCAAATATAAGGCCGG+AGG - chr2_4:39731838-39731857 Msa0327780:intron 45.0%
! GCTTAATGGATGTCAGGTCA+AGG - chr2_4:39732016-39732035 Msa0327780:intron 45.0%
TATAAGAACCACACCAGAGG+AGG - chr2_4:39732089-39732108 Msa0327780:intron 45.0%
!! GGAAAGCATTACACACCAAG+AGG - chr2_4:39732240-39732259 Msa0327780:intron 45.0%
CACACCAAGAGGTAAGTGAA+AGG - chr2_4:39732251-39732270 Msa0327780:intron 45.0%
! GATAAGTTGGATGATGGCCA+TGG - chr2_4:39732946-39732965 Msa0327780:CDS 45.0%
! CATGACAAACTGGTGGATAC+TGG - chr2_4:39733178-39733197 Msa0327780:intron 45.0%
AGGGCTATGAATGTCAAGGT+GGG - chr2_4:39733320-39733339 Msa0327780:intron 45.0%
TCCGTTTGGCCCTTAAAAGT+TGG - chr2_4:39733460-39733479 Msa0327780:intron 45.0%
!! GCCAACTTTTAAGGGCCAAA+CGG + chr2_4:39733464-39733483 None:intergenic 45.0%
!!! GAGCATGGGGTTGTTGATTT+TGG - chr2_4:39733559-39733578 Msa0327780:intron 45.0%
AGTCTGGCTGATACCTGATA+TGG - chr2_4:39733775-39733794 Msa0327780:intron 45.0%
CATCGCACCTGATATGTCTT+TGG + chr2_4:39733851-39733870 None:intergenic 45.0%
CTTATAGAGGTGGCTAGGAA+GGG + chr2_4:39733973-39733992 None:intergenic 45.0%
CTTCCTAGCCACCTCTATAA+GGG - chr2_4:39733972-39733991 Msa0327780:intron 45.0%
TTCCTAGCCACCTCTATAAG+GGG - chr2_4:39733973-39733992 Msa0327780:intron 45.0%
CTTTCTTCCCCTTATAGAGG+TGG + chr2_4:39733983-39734002 None:intergenic 45.0%
CACCTCTATAAGGGGAAGAA+AGG - chr2_4:39733981-39734000 Msa0327780:intron 45.0%
TATTCCGGGAAAGGGAACTT+TGG + chr2_4:39734201-39734220 None:intergenic 45.0%
TGCAAATGGTTGCTGCAGAT+TGG - chr2_4:39734432-39734451 Msa0327780:intron 45.0%
GACAGAAGGGAAGATGATCT+TGG - chr2_4:39734464-39734483 Msa0327780:intron 45.0%
AGAAGGGAAGATGATCTTGG+TGG - chr2_4:39734467-39734486 Msa0327780:intron 45.0%
!!! GCAGGTTGACTTTGGTGTTT+TGG - chr2_4:39734508-39734527 Msa0327780:CDS 45.0%
CTTGCAGAAATATGCAGCAC+AGG - chr2_4:39734623-39734642 Msa0327780:CDS 45.0%
AGAAATATGCAGCACAGGGT+GGG - chr2_4:39734628-39734647 Msa0327780:CDS 45.0%
GCCTGTCAGGGATATAACTA+TGG - chr2_4:39735017-39735036 Msa0327780:CDS 45.0%
GCCATAGTTATATCCCTGAC+AGG + chr2_4:39735021-39735040 None:intergenic 45.0%
! CTCGGTGTGCAAAACAAAGT+TGG + chr2_4:39735049-39735068 None:intergenic 45.0%
!!! CAACTTTGTTTTGCACACCG+AGG - chr2_4:39735047-39735066 Msa0327780:CDS 45.0%
AGATCGTCTTGCAACAGAGC+CGG - chr2_4:39726211-39726230 Msa0327780:three_prime_UTR 50.0%
! TGCAGGACTTGGTAGGTCTT+GGG + chr2_4:39726263-39726282 None:intergenic 50.0%
! GACATTCTGCAGGACTTGGT+AGG + chr2_4:39726270-39726289 None:intergenic 50.0%
CATCGCGTATGACATTCTGC+AGG + chr2_4:39726280-39726299 None:intergenic 50.0%
! ACAAAAACGATGGCGGCTCT+TGG - chr2_4:39726708-39726727 Msa0327780:intron 50.0%
AGTCCTTGTGGTCAGGCAAT+AGG - chr2_4:39726900-39726919 Msa0327780:intron 50.0%
GTCCTTGTGGTCAGGCAATA+GGG - chr2_4:39726901-39726920 Msa0327780:intron 50.0%
ATCCCTATTGCCTGACCACA+AGG + chr2_4:39726906-39726925 None:intergenic 50.0%
! GGGTTTGAAGCGATACACAG+AGG - chr2_4:39726931-39726950 Msa0327780:intron 50.0%
GGGTTCCTAACACACCAAAG+TGG + chr2_4:39727025-39727044 None:intergenic 50.0%
! CTTTGGTGTGTTAGGAACCC+TGG - chr2_4:39727025-39727044 Msa0327780:CDS 50.0%
ACGATCCGAGAAATGTGTGG+TGG + chr2_4:39727110-39727129 None:intergenic 50.0%
CACACGATCCGAGAAATGTG+TGG + chr2_4:39727113-39727132 None:intergenic 50.0%
TATGCTGCCCTAGCAGCATT+TGG + chr2_4:39727472-39727491 None:intergenic 50.0%
GATTGAAGAGGTAACCCGTG+AGG - chr2_4:39727619-39727638 Msa0327780:intron 50.0%
TTCCTCCCTCTCTTCTCTCA+CGG - chr2_4:39728251-39728270 Msa0327780:intron 50.0%
GGAAACCGTGAGAGAAGAGA+GGG + chr2_4:39728259-39728278 None:intergenic 50.0%
TGGAAACCGTGAGAGAAGAG+AGG + chr2_4:39728260-39728279 None:intergenic 50.0%
AGAGAGAGATGGGAGGAAGA+AGG + chr2_4:39728283-39728302 None:intergenic 50.0%
TCTTCCTCCCATCTCTCTCT+CGG - chr2_4:39728283-39728302 Msa0327780:intron 50.0%
GGGTTCAGTTTGGACAGAAC+TGG + chr2_4:39728438-39728457 None:intergenic 50.0%
GATGGGGTTAGGGTTCAGTT+TGG + chr2_4:39728448-39728467 None:intergenic 50.0%
GTGATAGGAGAAGTTGCTGG+TGG - chr2_4:39728600-39728619 Msa0327780:intron 50.0%
AAAAGGGGAGAAACGGGAAC+GGG - chr2_4:39728792-39728811 Msa0327780:intron 50.0%
AAGAAGAACGGGAACGGGAA+AGG - chr2_4:39728818-39728837 Msa0327780:intron 50.0%
AGAAGAACGGGAACGGGAAA+GGG - chr2_4:39728819-39728838 Msa0327780:intron 50.0%
! GTTTTTCGCCGCAGTTGTGA+CGG + chr2_4:39728845-39728864 None:intergenic 50.0%
ACAACTGCGGCGAAAAACAG+CGG - chr2_4:39728847-39728866 Msa0327780:intron 50.0%
GTTTGGGTAAGAGGGATCTG+AGG - chr2_4:39729020-39729039 Msa0327780:intron 50.0%
TGCATGAGGGATGAGGGAAA+GGG + chr2_4:39729228-39729247 None:intergenic 50.0%
ATGCATGAGGGATGAGGGAA+AGG + chr2_4:39729229-39729248 None:intergenic 50.0%
!! GGTTTTATGGACTGCTGTGC+TGG - chr2_4:39729675-39729694 Msa0327780:intron 50.0%
! ATGGACTGCTGTGCTGGAAT+TGG - chr2_4:39729681-39729700 Msa0327780:intron 50.0%
GTTGTAAACTGTCAACGGGG+TGG + chr2_4:39730171-39730190 None:intergenic 50.0%
TACGCCTCAGCTCATGGTTA+TGG - chr2_4:39731942-39731961 Msa0327780:intron 50.0%
AGGTCCATAACCATGAGCTG+AGG + chr2_4:39731949-39731968 None:intergenic 50.0%
TGGATATGCAACACCTCCTC+TGG + chr2_4:39732105-39732124 None:intergenic 50.0%
GTCTGGGTTAAGCTGTCCTT+TGG + chr2_4:39732152-39732171 None:intergenic 50.0%
CTTAACCCAGACATTTGCCG+CGG - chr2_4:39732160-39732179 Msa0327780:intron 50.0%
ACACCTGACGAGATACCTGA+GGG - chr2_4:39733124-39733143 Msa0327780:intron 50.0%
AAAGCCAGGTGACAGAGTTG+AGG - chr2_4:39733201-39733220 Msa0327780:intron 50.0%
CAGGGCTATGAATGTCAAGG+TGG - chr2_4:39733319-39733338 Msa0327780:intron 50.0%
GGGGATCAGTCAACAGAAAG+AGG - chr2_4:39733591-39733610 Msa0327780:intron 50.0%
TGGCTAGGAAGGGATAGGTA+AGG + chr2_4:39733963-39733982 None:intergenic 50.0%
CCTTATAGAGGTGGCTAGGA+AGG + chr2_4:39733974-39733993 None:intergenic 50.0%
CCTTCCTAGCCACCTCTATA+AGG - chr2_4:39733971-39733990 Msa0327780:intron 50.0%
TTCCCCTTATAGAGGTGGCT+AGG + chr2_4:39733978-39733997 None:intergenic 50.0%
TCAACCTGCATAATGCTCCC+AGG + chr2_4:39734497-39734516 None:intergenic 50.0%
CAGAAATATGCAGCACAGGG+TGG - chr2_4:39734627-39734646 Msa0327780:CDS 50.0%
!!! CTTTGTTTTGCACACCGAGG+TGG - chr2_4:39735050-39735069 Msa0327780:CDS 50.0%
ACGATCTGGCCAATCGCTTC+CGG + chr2_4:39726198-39726217 None:intergenic 55.0%
GGCTCTGTTGCAAGACGATC+TGG + chr2_4:39726212-39726231 None:intergenic 55.0%
GATCGTCTTGCAACAGAGCC+GGG - chr2_4:39726212-39726231 Msa0327780:three_prime_UTR 55.0%
! GCAGGACTTGGTAGGTCTTG+GGG + chr2_4:39726262-39726281 None:intergenic 55.0%
! CTGCAGGACTTGGTAGGTCT+TGG + chr2_4:39726264-39726283 None:intergenic 55.0%
CGACGTCATCAGCACCAGAA+TGG + chr2_4:39726331-39726350 None:intergenic 55.0%
ATGACGTCGTACCAGGTTGC+TGG - chr2_4:39726342-39726361 Msa0327780:three_prime_UTR 55.0%
!! GGATCGGTTTTCCAGCAACC+TGG + chr2_4:39726356-39726375 None:intergenic 55.0%
! CTGATGATGACACGATGGCG+CGG + chr2_4:39726613-39726632 None:intergenic 55.0%
TGTGGACACGGCGACTTTAC+TGG - chr2_4:39726650-39726669 Msa0327780:intron 55.0%
CTGCAATGGCTGAGTCCTTG+TGG - chr2_4:39726888-39726907 Msa0327780:intron 55.0%
ATGGCTGAGTCCTTGTGGTC+AGG - chr2_4:39726893-39726912 Msa0327780:intron 55.0%
CGCTGCCACCACACATTTCT+CGG - chr2_4:39727102-39727121 Msa0327780:CDS 55.0%
AACCGTGAGAGAAGAGAGGG+AGG + chr2_4:39728256-39728275 None:intergenic 55.0%
GAGAGATGGGAGGAAGAAGG+TGG + chr2_4:39728280-39728299 None:intergenic 55.0%
GAGAGGACCGAGAGAGAGAT+GGG + chr2_4:39728293-39728312 None:intergenic 55.0%
TGAGAGGACCGAGAGAGAGA+TGG + chr2_4:39728294-39728313 None:intergenic 55.0%
GGGAACGGGAGGAAGAAGAA+CGG - chr2_4:39728806-39728825 Msa0327780:intron 55.0%
GGAACGGGAGGAAGAAGAAC+GGG - chr2_4:39728807-39728826 Msa0327780:intron 55.0%
GGGAGGAAGAAGAACGGGAA+CGG - chr2_4:39728812-39728831 Msa0327780:intron 55.0%
GGAGGAAGAAGAACGGGAAC+GGG - chr2_4:39728813-39728832 Msa0327780:intron 55.0%
!! ATGGTGATGGCAGCAAGCTC+TGG + chr2_4:39729185-39729204 None:intergenic 55.0%
GCAAGCAGTGTAGAGAGCGA+TGG - chr2_4:39730913-39730932 Msa0327780:intron 55.0%
! TTGGTACTGAAGGACGTGGC+AGG - chr2_4:39731490-39731509 Msa0327780:intron 55.0%
TTGAGCTACGCCTCAGCTCA+TGG - chr2_4:39731936-39731955 Msa0327780:intron 55.0%
ATGCAACACCTCCTCTGGTG+TGG + chr2_4:39732100-39732119 None:intergenic 55.0%
ATCTATGAAGTGGGCAGCCG+CGG + chr2_4:39732180-39732199 None:intergenic 55.0%
GACACCTGACGAGATACCTG+AGG - chr2_4:39733123-39733142 Msa0327780:intron 55.0%
! CTGGTGGATACTGGAAAGCC+AGG - chr2_4:39733187-39733206 Msa0327780:intron 55.0%
CTCACCTCAACTCTGTCACC+TGG + chr2_4:39733208-39733227 None:intergenic 55.0%
AGAGGTGGCTAGGAAGGGAT+AGG + chr2_4:39733968-39733987 None:intergenic 55.0%
CTGGCTCCGTGAGTACAAAG+AGG + chr2_4:39734057-39734076 None:intergenic 55.0%
GAGCCAGTCGTCTAGGTCAA+GGG - chr2_4:39734070-39734089 Msa0327780:intron 55.0%
AGCCAGTCGTCTAGGTCAAG+GGG - chr2_4:39734071-39734090 Msa0327780:intron 55.0%
! ATGATCTTGGTGGCCGTCCT+GGG - chr2_4:39734477-39734496 Msa0327780:intron 55.0%
CCTGCATAATGCTCCCAGGA+CGG + chr2_4:39734493-39734512 None:intergenic 55.0%
CTTGCAACAGAGCCGGGAAC+AGG - chr2_4:39726218-39726237 Msa0327780:three_prime_UTR 60.0%
!! GGTGCTGATGACGTCGTACC+AGG - chr2_4:39726335-39726354 Msa0327780:three_prime_UTR 60.0%
! AACGATGGCGGCTCTTGGTG+TGG - chr2_4:39726713-39726732 Msa0327780:intron 60.0%
TAGGTGGGGAGGTAGCGTTG+TGG - chr2_4:39726813-39726832 Msa0327780:CDS 60.0%
AGGACCGAGAGAGAGATGGG+AGG + chr2_4:39728290-39728309 None:intergenic 60.0%
GGAAAGGGCCGTCACAACTG+CGG - chr2_4:39728834-39728853 Msa0327780:intron 60.0%
! GGGATCTGAGGTCGAGAGTG+AGG - chr2_4:39729032-39729051 Msa0327780:intron 60.0%
TGAGGTCGAGAGTGAGGCAG+AGG - chr2_4:39729038-39729057 Msa0327780:intron 60.0%
GAGGTCGAGAGTGAGGCAGA+GGG - chr2_4:39729039-39729058 Msa0327780:intron 60.0%
GAGCTGAGGCGTAGCTCAAG+TGG + chr2_4:39731935-39731954 None:intergenic 60.0%
CCTCCCTCAGGTATCTCGTC+AGG + chr2_4:39733130-39733149 None:intergenic 60.0%
CCTGACGAGATACCTGAGGG+AGG - chr2_4:39733127-39733146 Msa0327780:intron 60.0%
ACTCACGGAGCCAGTCGTCT+AGG - chr2_4:39734063-39734082 Msa0327780:intron 60.0%
GGAGCCAGTCGTCTAGGTCA+AGG - chr2_4:39734069-39734088 Msa0327780:intron 60.0%
AGCCCCTTGACCTAGACGAC+TGG + chr2_4:39734076-39734095 None:intergenic 60.0%
! GATGATCTTGGTGGCCGTCC+TGG - chr2_4:39734476-39734495 Msa0327780:intron 60.0%
!! CCGTCCTGGGAGCATTATGC+AGG - chr2_4:39734490-39734509 Msa0327780:CDS 60.0%
TCTGGCCAATCGCTTCCGGC+TGG + chr2_4:39726194-39726213 None:intergenic 65.0%
AGGGGAGAAACGGGAACGGG+AGG - chr2_4:39728795-39728814 Msa0327780:intron 65.0%
!! GAAAAACAGCGGCGCCGGTG+AGG - chr2_4:39728858-39728877 Msa0327780:intron 65.0%
GGCAGCCGCGGCAAATGTCT+GGG + chr2_4:39732168-39732187 None:intergenic 65.0%
! GTGTGAGGCGTTCCTCCCTC+AGG + chr2_4:39733142-39733161 None:intergenic 65.0%
GGTGGCCAGCCGGAAGCGAT+TGG - chr2_4:39726186-39726205 Msa0327780:three_prime_UTR 70.0%
GCGGCGAAAAACAGCGGCGC+CGG - chr2_4:39728853-39728872 Msa0327780:intron 70.0%
GGGCAGCCGCGGCAAATGTC+TGG + chr2_4:39732169-39732188 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 39726179 39735347 39726179 ID=Msa0327780;Name=Msa0327780
chr2_4 mRNA 39726179 39735347 39726179 ID=Msa0327780-mRNA-1;Parent=Msa0327780;Name=Msa0327780-mRNA-1;_AED=0.25;_eAED=0.31;_QI=0|0.28|0.4|0.93|1|1|15|267|770
chr2_4 exon 39726179 39726500 39726179 ID=Msa0327780-mRNA-1:exon:12033;Parent=Msa0327780-mRNA-1
chr2_4 exon 39726790 39726896 39726790 ID=Msa0327780-mRNA-1:exon:12032;Parent=Msa0327780-mRNA-1
chr2_4 exon 39726997 39727134 39726997 ID=Msa0327780-mRNA-1:exon:12031;Parent=Msa0327780-mRNA-1
chr2_4 exon 39727664 39727760 39727664 ID=Msa0327780-mRNA-1:exon:12030;Parent=Msa0327780-mRNA-1
chr2_4 exon 39727987 39728018 39727987 ID=Msa0327780-mRNA-1:exon:12029;Parent=Msa0327780-mRNA-1
chr2_4 exon 39728150 39728221 39728150 ID=Msa0327780-mRNA-1:exon:12028;Parent=Msa0327780-mRNA-1
chr2_4 exon 39728304 39728436 39728304 ID=Msa0327780-mRNA-1:exon:12027;Parent=Msa0327780-mRNA-1
chr2_4 exon 39729265 39729494 39729265 ID=Msa0327780-mRNA-1:exon:12026;Parent=Msa0327780-mRNA-1
chr2_4 exon 39729808 39729928 39729808 ID=Msa0327780-mRNA-1:exon:12025;Parent=Msa0327780-mRNA-1
chr2_4 exon 39730015 39730164 39730015 ID=Msa0327780-mRNA-1:exon:12024;Parent=Msa0327780-mRNA-1
chr2_4 exon 39730518 39730569 39730518 ID=Msa0327780-mRNA-1:exon:12023;Parent=Msa0327780-mRNA-1
chr2_4 exon 39730918 39730982 39730918 ID=Msa0327780-mRNA-1:exon:12022;Parent=Msa0327780-mRNA-1
chr2_4 exon 39732642 39732743 39732642 ID=Msa0327780-mRNA-1:exon:12021;Parent=Msa0327780-mRNA-1
chr2_4 exon 39732877 39732967 39732877 ID=Msa0327780-mRNA-1:exon:12020;Parent=Msa0327780-mRNA-1
chr2_4 exon 39734480 39735347 39734480 ID=Msa0327780-mRNA-1:exon:12019;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39734480 39735347 39734480 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39732877 39732967 39732877 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39732642 39732743 39732642 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39730918 39730982 39730918 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39730518 39730569 39730518 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39730015 39730164 39730015 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39729808 39729928 39729808 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39729265 39729494 39729265 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39728304 39728436 39728304 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39728150 39728221 39728150 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39727987 39728018 39727987 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39727664 39727760 39727664 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39726997 39727134 39726997 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39726790 39726896 39726790 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 CDS 39726446 39726500 39726446 ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1
chr2_4 three_prime_UTR 39726179 39726445 39726179 ID=Msa0327780-mRNA-1:three_prime_utr;Parent=Msa0327780-mRNA-1
Gene Sequence

>Msa0327780

ATGTTCTGGTGGCCAGCCGGAAGCGATTGGCCAGATCGTCTTGCAACAGAGCCGGGAACAGGTCATTTAAATCCCTTAAACCCCAAGACCTACCAAGTCCTGCAGAATGTCATACGCGATGTAACCACATTGTTCCCGGAACAATTTTACCATTCTGGTGCTGATGACGTCGTACCAGGTTGCTGGAAAACCGATCCAACAATTCAGAAATTTCTATCAAATAATGGAACTCTCAGCCAAGTCCTTGAGACGTTTATCAACAACACTCTCCCTTTCATTTTATCCCTCAACCGTACTGTTGTCTATTGGGAAGATGTTCTATTAGACGATACAGTCCATGTTCCATCGACGATTCTCACTAAAGAACATGTGATTTTGCAGACATGGAACAATGGACATGACAACACTAAAAGGATAGTATCTTCTGGATACCGCGCCATCGTGTCATCATCAGACTTCTATTATCTTGACTGTGGACACGGCGACTTTACTGGAAATAACAGTATTTACGACAACCAAACAGGAAGTGACAAAAACGATGGCGGCTCTTGGTGTGGACCTTTTAAAACATGGCAAACTATATACAATTATGATATAACTTATGAACTGACCGAAGAAGAAGCGAAATTGGTTTTAGGTGGGGAGGTAGCGTTGTGGTCAGAACTAGCCGATGAAACTGTTTTGGATTCGCGACTTTGGCCTAGAACTTCTGCAATGGCTGAGTCCTTGTGGTCAGGCAATAGGGATGAAAAGGGTTTGAAGCGATACACAGAGGCAACAGATAGATTGAATGAATGGAGAAGCAGAATGGTGAACAGAGGTATAGGAGCTGAGCCTATTCAACCACTTTGGTGTGTTAGGAACCCTGGTTTGATGCTTTTGATTTTGGTTTTTATCTGTAGAAGTAAAGTGATAGGAGAAGTTGCTGGTGGGAAATCTCTATTCATGAAGGATGAGTTAAAGAAAAAAAAAGGGGAGAAACGGGAACGGGAGGAAGAAGAACGGGAACGGGAAAGGGCCGTCACAACTGCGGCGAAAAACAGCGGCGCCGGTGAGGAAGAGGATGTTGGCAGTAATATCGCATTGAAAATTCTGAAGCGTGTAGAAAAAGGTTGGGGTCAAGGAACTGCTTTAACAAGATCATTCAAGCGGTATCTGACTGAGGATCAAATTTTCAGAATCGATCACTATCTTGGAAAAGAGCTTGTGGAAAATCTTTTTGTTCTCCGATTCTCAAATCTAATTTTTGACCCTTTGTGGTCGAGGCAATACATAAGAAATGTACAGTTGATATTCTCAGCAGATTTTGGTACTGAAGGACGTGGCAGGTACTTTGACAATTATGGTATAATTAGAGATATTATGCAGAATCATCTACTTCAAATACTAGTCCTCTTTGCAATGGAAACTCCTGTTAGTTTGGATGTAGAGGACATTAGAAATGAAAAGGTCAAGGTTCTTCGTTCTATGAGACCGATTAAACTCGAGGATGTAGTTTTAGGCCAATATAAGAACCACACCAGAGGAGGTGTTGCATATCCAGCCTACATTGATGACAAAACTGTACCAAAGGACAGCTTAACCCAGACATTTGCCGCGGCTGCCCACTTCATAGATAATGCAAGATGGGATGGGGTACCTTTTTTGATGAAGGCTGGGAAAGCATTACACACCAAGAGGTTTACTGATAAACAAATTATGAGGCTTCAGGAGACACCTGACGAGATACCTGAGGGAGGAACGCCTCACACTGTTAGCTTACTATTGCATGACAAACTGGTGGATACTGGAAAGCCAGGTGACAGAGTTGAGGTGACTGGTATATACAGGGCTATGAATGTCAAGGTGGGACCAACTAAGAGAACTGTTAAGTCATTGTTCAAAGAAAAATGTGTTGCTATCATGAAGGAATCCTTGAAATATACAGTCTGGCTGATACCTGATATGGATACTTTCATCGAAAATTTAAACAGCGTTGGTTATCTACTCAAAAAAGGACCAAAGACATATCAGTTAGAGTTTGAATCCTTAACCACTTATCTATTTGCTTTTATGCAAATGGTTGCTGCAGATTGGTTGAGATCTGACAGAAGGGAAGATGATCTTGGTGGCCGTCCTGGGAGCATTATGCAGGTTGACTTTGGTGTTTTGAAATATGCAGCACAGGGTGGGCCTGAGTTTTTCATTGTAAACATCTGTGGTGTTGTTCTCCCTTTGAATCCTTCTTTTCTTAAGATCATGACTCTGCCATATCTAAAGGATATAACTATGGCATTTCCCAACTTTGTTTTGCACACCGAGGTGGAAGATTAG

Protein sequence

>Msa0327780

MFWWPAGSDWPDRLATEPGTGHLNPLNPKTYQVLQNVIRDVTTLFPEQFYHSGADDVVPGCWKTDPTIQKFLSNNGTLSQVLETFINNTLPFILSLNRTVVYWEDVLLDDTVHVPSTILTKEHVILQTWNNGHDNTKRIVSSGYRAIVSSSDFYYLDCGHGDFTGNNSIYDNQTGSDKNDGGSWCGPFKTWQTIYNYDITYELTEEEAKLVLGGEVALWSELADETVLDSRLWPRTSAMAESLWSGNRDEKGLKRYTEATDRLNEWRSRMVNRGIGAEPIQPLWCVRNPGLMLLILVFICRSKVIGEVAGGKSLFMKDELKKKKGEKREREEEERERERAVTTAAKNSGAGEEEDVGSNIALKILKRVEKGWGQGTALTRSFKRYLTEDQIFRIDHYLGKELVENLFVLRFSNLIFDPLWSRQYIRNVQLIFSADFGTEGRGRYFDNYGIIRDIMQNHLLQILVLFAMETPVSLDVEDIRNEKVKVLRSMRPIKLEDVVLGQYKNHTRGGVAYPAYIDDKTVPKDSLTQTFAAAAHFIDNARWDGVPFLMKAGKALHTKRFTDKQIMRLQETPDEIPEGGTPHTVSLLLHDKLVDTGKPGDRVEVTGIYRAMNVKVGPTKRTVKSLFKEKCVAIMKESLKYTVWLIPDMDTFIENLNSVGYLLKKGPKTYQLEFESLTTYLFAFMQMVAADWLRSDRREDDLGGRPGSIMQVDFGVLKYAAQGGPEFFIVNICGVVLPLNPSFLKIMTLPYLKDITMAFPNFVLHTEVED*