Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0327780 | XP_003595850.2 | 96.220 | 291 | 11 | 0 | 1 | 291 | 309 | 599 | 0.0 | 602 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0327780 | sp|Q9SYK0|HEXO2_ARATH | 70.890 | 292 | 80 | 2 | 1 | 291 | 282 | 569 | 2.85e-149 | 451 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0220800 | Msa0327780 | 0.873587 | 1.310062e-67 | -8.615850e-47 |
Msa0276460 | Msa0327780 | 0.916202 | 2.365526e-85 | -8.615850e-47 |
Msa0327780 | Msa0483120 | 0.829733 | 4.364784e-55 | -8.615850e-47 |
Msa0327780 | Msa0771800 | 0.898822 | 3.641204e-77 | -8.615850e-47 |
Msa0327780 | Msa1096620 | 0.853185 | 2.824538e-61 | -8.615850e-47 |
Msa0327780 | Msa1098140 | 0.907763 | 3.565877e-81 | -8.615850e-47 |
Msa0327780 | Msa1155150 | 0.875385 | 3.212009e-68 | -8.615850e-47 |
Msa0327780 | Msa1227510 | 0.921557 | 3.069663e-88 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0327780 | MtrunA17_Chr2g0309231 | 96.220 | 291 | 11 | 0 | 1 | 291 | 309 | 599 | 0.0 | 602 |
Msa0327780 | MtrunA17_Chr7g0222441 | 89.848 | 197 | 16 | 1 | 368 | 560 | 250 | 446 | 9.77e-115 | 360 |
Msa0327780 | MtrunA17_Chr8g0341321 | 63.214 | 280 | 64 | 4 | 368 | 618 | 237 | 506 | 2.96e-105 | 334 |
Msa0327780 | MtrunA17_Chr8g0358431 | 78.771 | 179 | 34 | 1 | 368 | 542 | 27 | 205 | 1.21e-91 | 285 |
Msa0327780 | MtrunA17_Chr6g0458971 | 56.345 | 197 | 72 | 2 | 368 | 560 | 183 | 369 | 2.92e-61 | 215 |
Msa0327780 | MtrunA17_Chr7g0228611 | 55.838 | 197 | 73 | 2 | 368 | 560 | 180 | 366 | 3.81e-61 | 214 |
Msa0327780 | MtrunA17_Chr8g0356701 | 82.243 | 107 | 19 | 0 | 455 | 561 | 1 | 107 | 1.25e-55 | 186 |
Msa0327780 | MtrunA17_Chr7g0271531 | 54.922 | 193 | 73 | 4 | 368 | 556 | 270 | 452 | 7.54e-55 | 199 |
Msa0327780 | MtrunA17_Chr8g0356771 | 69.065 | 139 | 25 | 2 | 368 | 488 | 27 | 165 | 1.41e-54 | 185 |
Msa0327780 | MtrunA17_Chr4g0035581 | 82.716 | 81 | 12 | 1 | 560 | 638 | 306 | 386 | 4.39e-34 | 140 |
Msa0327780 | MtrunA17_Chr8g0356781 | 71.951 | 82 | 23 | 0 | 490 | 571 | 1 | 82 | 9.96e-33 | 126 |
Msa0327780 | MtrunA17_Chr1g0212791 | 26.829 | 287 | 169 | 7 | 7 | 289 | 278 | 527 | 1.90e-23 | 105 |
Msa0327780 | MtrunA17_Chr7g0222681 | 27.986 | 293 | 162 | 11 | 4 | 289 | 299 | 549 | 3.22e-22 | 101 |
Msa0327780 | MtrunA17_Chr2g0326781 | 82.000 | 50 | 2 | 2 | 684 | 732 | 539 | 582 | 1.45e-15 | 80.9 |
Msa0327780 | MtrunA17_Chr8g0388331 | 93.548 | 31 | 2 | 0 | 740 | 770 | 180 | 210 | 5.73e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0327780 | AT1G05590.2 | 70.890 | 292 | 80 | 2 | 1 | 291 | 282 | 569 | 2.90e-150 | 451 |
Msa0327780 | AT1G05590.3 | 70.890 | 292 | 80 | 2 | 1 | 291 | 282 | 569 | 2.90e-150 | 451 |
Msa0327780 | AT1G05590.1 | 70.890 | 292 | 80 | 2 | 1 | 291 | 282 | 569 | 2.90e-150 | 451 |
Msa0327780 | AT5G13110.1 | 84.184 | 196 | 27 | 1 | 368 | 559 | 251 | 446 | 2.88e-108 | 343 |
Msa0327780 | AT1G24280.1 | 83.673 | 196 | 28 | 1 | 368 | 559 | 254 | 449 | 4.66e-106 | 337 |
Msa0327780 | AT5G35790.1 | 78.571 | 196 | 38 | 1 | 368 | 559 | 232 | 427 | 1.44e-99 | 320 |
Msa0327780 | AT3G27300.1 | 57.360 | 197 | 70 | 2 | 368 | 560 | 181 | 367 | 4.13e-63 | 220 |
Msa0327780 | AT3G27300.3 | 57.360 | 197 | 70 | 2 | 368 | 560 | 181 | 367 | 4.13e-63 | 220 |
Msa0327780 | AT3G27300.2 | 57.360 | 197 | 70 | 2 | 368 | 560 | 181 | 367 | 4.13e-63 | 220 |
Msa0327780 | AT3G27300.5 | 57.360 | 197 | 70 | 2 | 368 | 560 | 235 | 421 | 1.59e-62 | 220 |
Msa0327780 | AT3G27300.4 | 57.360 | 197 | 70 | 2 | 368 | 560 | 252 | 438 | 2.23e-62 | 220 |
Msa0327780 | AT5G40760.2 | 56.345 | 197 | 72 | 2 | 368 | 560 | 180 | 366 | 9.75e-62 | 216 |
Msa0327780 | AT5G40760.1 | 56.345 | 197 | 72 | 2 | 368 | 560 | 180 | 366 | 9.75e-62 | 216 |
Msa0327780 | AT1G09420.1 | 52.525 | 198 | 77 | 4 | 368 | 560 | 295 | 480 | 8.11e-53 | 194 |
Msa0327780 | AT1G09420.2 | 49.519 | 208 | 78 | 5 | 368 | 560 | 295 | 490 | 3.15e-49 | 184 |
Msa0327780 | AT2G16440.1 | 79.012 | 81 | 15 | 1 | 560 | 638 | 313 | 393 | 3.43e-32 | 134 |
Msa0327780 | AT3G55260.1 | 26.241 | 282 | 167 | 7 | 10 | 289 | 290 | 532 | 6.95e-22 | 100 |
Msa0327780 | AT1G65590.1 | 26.374 | 273 | 158 | 8 | 10 | 280 | 287 | 518 | 1.43e-21 | 99.8 |
Msa0327780 | AT2G28320.1 | 70.000 | 50 | 8 | 2 | 684 | 732 | 549 | 592 | 2.79e-12 | 70.9 |
Find 185 sgRNAs with CRISPR-Local
Find 607 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGATATTCTCAGCAGATTT+TGG | 0.204590 | 2_4:-39730033 | Msa0327780:CDS |
CTCTGGTGTGGTTCTTATAT+TGG | 0.220904 | 2_4:+39729419 | None:intergenic |
TGTAGGTACTTTGACAATTA+TGG | 0.237604 | 2_4:-39729911 | Msa0327780:intron |
TTGGTAGGTCTTGGGGTTTA+AGG | 0.248007 | 2_4:+39735252 | None:intergenic |
CAGAAATTTCTATCAAATAA+TGG | 0.278468 | 2_4:-39735121 | Msa0327780:CDS |
CTGCAGGACTTGGTAGGTCT+TGG | 0.282162 | 2_4:+39735243 | None:intergenic |
TGCAGGACTTGGTAGGTCTT+GGG | 0.284268 | 2_4:+39735244 | None:intergenic |
TGTGGACACGGCGACTTTAC+TGG | 0.284986 | 2_4:-39734854 | Msa0327780:CDS |
GGGCAGCCGCGGCAAATGTC+TGG | 0.287615 | 2_4:+39729338 | None:intergenic |
GCAGGTTGACTTTGGTGTTT+TGG | 0.289425 | 2_4:-39726996 | Msa0327780:intron |
ACTAGCCGATGAAACTGTTT+TGG | 0.294927 | 2_4:-39734663 | Msa0327780:CDS |
ATGGACATGACAACACTAAA+AGG | 0.308012 | 2_4:-39734934 | Msa0327780:CDS |
GACCGAAGAAGAAGCGAAAT+TGG | 0.308102 | 2_4:-39734717 | Msa0327780:CDS |
GATAGAAATTTCTGAATTGT+TGG | 0.328121 | 2_4:+39735130 | None:intergenic |
CAACCGTACTGTTGTCTATT+GGG | 0.333502 | 2_4:-39735038 | Msa0327780:CDS |
TGGTAGGTCTTGGGGTTTAA+GGG | 0.334909 | 2_4:+39735253 | None:intergenic |
TTCAACCACTTTGGTGTGTT+AGG | 0.344290 | 2_4:-39734487 | Msa0327780:CDS |
TAAACAAATTATGAGGCTTC+AGG | 0.348456 | 2_4:-39728405 | Msa0327780:CDS |
TCAACCGTACTGTTGTCTAT+TGG | 0.350488 | 2_4:-39735039 | Msa0327780:CDS |
CTTACTATTGCATGACAAAC+TGG | 0.357680 | 2_4:-39728336 | Msa0327780:CDS |
GATGATCTTGGTGGCCGTCC+TGG | 0.359921 | 2_4:-39727028 | Msa0327780:CDS |
AGTCCTTGTGGTCAGGCAAT+AGG | 0.362517 | 2_4:-39734604 | Msa0327780:CDS |
AGCAAATAGATAAGTGGTTA+AGG | 0.372183 | 2_4:+39727099 | None:intergenic |
CCAGAATGGTAAAATTGTTC+CGG | 0.373560 | 2_4:+39735190 | None:intergenic |
ATTCTGAAGCGTGTAGAAAA+AGG | 0.373678 | 2_4:-39730932 | Msa0327780:CDS |
GGAGGAAGAAGAACGGGAAC+GGG | 0.374447 | 2_4:-39732691 | Msa0327780:CDS |
TCGATGAAAGTATCCATATC+AGG | 0.376038 | 2_4:+39727716 | None:intergenic |
GGCTCTGTTGCAAGACGATC+TGG | 0.380818 | 2_4:+39735295 | None:intergenic |
TATAGAATCGATCACTATCT+TGG | 0.382137 | 2_4:-39730147 | Msa0327780:intron |
TCCTCTACATCCAAACTAAC+AGG | 0.382610 | 2_4:+39729824 | None:intergenic |
AGTCTGGCTGATACCTGATA+TGG | 0.388600 | 2_4:-39727729 | Msa0327780:CDS |
AACCAATTTCGCTTCTTCTT+CGG | 0.390626 | 2_4:+39734715 | None:intergenic |
AATGGAAACTCCTGTTAGTT+TGG | 0.394148 | 2_4:-39729834 | Msa0327780:CDS |
TCAGCCATTGCAGAAGTTCT+AGG | 0.394283 | 2_4:+39734626 | None:intergenic |
CATCGCACCTGATATGTCTT+TGG | 0.395784 | 2_4:+39727656 | None:intergenic |
AGAAGAACGGGAACGGGAAA+GGG | 0.396624 | 2_4:-39732685 | Msa0327780:CDS |
CATGACAAACTGGTGGATAC+TGG | 0.399287 | 2_4:-39728326 | Msa0327780:CDS |
ATGACGTCGTACCAGGTTGC+TGG | 0.406537 | 2_4:-39735162 | Msa0327780:CDS |
GACTTAACAGTTCTCTTAGT+TGG | 0.411810 | 2_4:+39728160 | None:intergenic |
ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 2_4:+39729448 | None:intergenic |
AAAGAAACCTACTTTAGATA+TGG | 0.414269 | 2_4:+39726778 | None:intergenic |
GTCCTTGTGGTCAGGCAATA+GGG | 0.416098 | 2_4:-39734603 | Msa0327780:CDS |
CTTTGCCTAATTAAAATCAA+TGG | 0.418036 | 2_4:-39726253 | Msa0327780:three_prime_UTR |
CGATGTAACCACATTGTTCC+CGG | 0.418185 | 2_4:-39735209 | Msa0327780:CDS |
TTGAAGATCAATGCACTTGA+AGG | 0.424310 | 2_4:-39726413 | Msa0327780:three_prime_UTR |
AGAATGGTGAACAGAGGTAT+AGG | 0.424887 | 2_4:-39734521 | Msa0327780:CDS |
TAACATGTGCTAACATGTTC+TGG | 0.425511 | 2_4:-39735339 | None:intergenic |
GTCAGGCAATAGGGATGAAA+AGG | 0.425841 | 2_4:-39734594 | Msa0327780:CDS |
GCCTGTCAGGGATATAACTA+TGG | 0.426019 | 2_4:-39726487 | Msa0327780:intron |
GGATTTAAATGACCTGTTCC+CGG | 0.426058 | 2_4:+39735274 | None:intergenic |
AAAAGGACCAAAGACATATC+AGG | 0.426577 | 2_4:-39727663 | Msa0327780:intron |
AAAAGGGGAGAAACGGGAAC+GGG | 0.427372 | 2_4:-39732712 | Msa0327780:CDS |
ACACACCAAAGTGGTTGAAT+AGG | 0.427892 | 2_4:+39734491 | None:intergenic |
ACGATCTGGCCAATCGCTTC+CGG | 0.428599 | 2_4:+39735309 | None:intergenic |
TAGTTTCTTTGATCATTCAT+TGG | 0.431004 | 2_4:+39726170 | None:intergenic |
CTGTTACTTGACAGGGATGT+TGG | 0.431891 | 2_4:-39730974 | Msa0327780:intron |
ATCAGGTGACTGGTATATAC+AGG | 0.439760 | 2_4:-39728204 | Msa0327780:intron |
GTCTGGGTTAAGCTGTCCTT+TGG | 0.440910 | 2_4:+39729355 | None:intergenic |
TTGTAATTGTATATAACCTT+AGG | 0.442094 | 2_4:-39726290 | Msa0327780:three_prime_UTR |
ATCTGTAGAAGTAAAGTGAT+AGG | 0.442218 | 2_4:-39732919 | Msa0327780:CDS |
TTACTGATAAACAAATTATG+AGG | 0.445606 | 2_4:-39728412 | Msa0327780:CDS |
CTTGCAACAGAGCCGGGAAC+AGG | 0.445919 | 2_4:-39735286 | Msa0327780:CDS |
CAGAATGGTAAAATTGTTCC+GGG | 0.446032 | 2_4:+39735191 | None:intergenic |
AAGAAGAACGGGAACGGGAA+AGG | 0.451694 | 2_4:-39732686 | Msa0327780:CDS |
CAACAGATAGATTGAATGAA+TGG | 0.452558 | 2_4:-39734550 | Msa0327780:CDS |
CATAAAAGCAAATAGATAAG+TGG | 0.452901 | 2_4:+39727093 | None:intergenic |
ATGATCTTGGTGGCCGTCCT+GGG | 0.462970 | 2_4:-39727027 | Msa0327780:CDS |
TGGATATGCAACACCTCCTC+TGG | 0.463674 | 2_4:+39729402 | None:intergenic |
AGATCGTCTTGCAACAGAGC+CGG | 0.466886 | 2_4:-39735293 | Msa0327780:CDS |
CTCGGTGTGCAAAACAAAGT+TGG | 0.468884 | 2_4:+39726458 | None:intergenic |
AGTATTTACGACAACCAAAC+AGG | 0.473889 | 2_4:-39734824 | Msa0327780:CDS |
GGAACGGGAGGAAGAAGAAC+GGG | 0.475533 | 2_4:-39732697 | Msa0327780:CDS |
CCTCCCTCAGGTATCTCGTC+AGG | 0.476130 | 2_4:+39728377 | None:intergenic |
TGATAAACGTCTCAAGGACT+TGG | 0.477132 | 2_4:+39735089 | None:intergenic |
AGCATTATGCAGGTTGACTT+TGG | 0.479540 | 2_4:-39727004 | Msa0327780:CDS |
ACTAAAAGGATAGTATCTTC+TGG | 0.481580 | 2_4:-39734920 | Msa0327780:CDS |
GTATGACATTCTGCAGGACT+TGG | 0.482257 | 2_4:+39735233 | None:intergenic |
ATCGAAAATTTAAACAGCGT+TGG | 0.484696 | 2_4:-39727698 | Msa0327780:CDS |
GATCGTCTTGCAACAGAGCC+GGG | 0.487708 | 2_4:-39735292 | Msa0327780:CDS |
GCAGGACTTGGTAGGTCTTG+GGG | 0.489357 | 2_4:+39735245 | None:intergenic |
GTCATGATCTTAAGAAAAGA+AGG | 0.490748 | 2_4:+39726805 | None:intergenic |
CTTCATAGATAATGCAAGAT+GGG | 0.490793 | 2_4:-39729314 | Msa0327780:CDS |
CTTGCAGAAATATGCAGCAC+AGG | 0.492843 | 2_4:-39726881 | Msa0327780:intron |
TCCTGTTAGTTTGGATGTAG+AGG | 0.492884 | 2_4:-39729825 | Msa0327780:CDS |
GGTGCTGATGACGTCGTACC+AGG | 0.495012 | 2_4:-39735169 | Msa0327780:CDS |
TCGGTGTGCAAAACAAAGTT+GGG | 0.496240 | 2_4:+39726459 | None:intergenic |
GGTGGCCAGCCGGAAGCGAT+TGG | 0.500162 | 2_4:-39735318 | Msa0327780:CDS |
ATGGCTGAGTCCTTGTGGTC+AGG | 0.502527 | 2_4:-39734611 | Msa0327780:CDS |
AGAGGACATTAGAAATGAAA+AGG | 0.504615 | 2_4:-39729807 | Msa0327780:intron |
GACAGAAGGGAAGATGATCT+TGG | 0.506460 | 2_4:-39727040 | Msa0327780:CDS |
TGCAAATGGTTGCTGCAGAT+TGG | 0.511099 | 2_4:-39727072 | Msa0327780:CDS |
TCTGGCCAATCGCTTCCGGC+TGG | 0.511465 | 2_4:+39735313 | None:intergenic |
AATAGACAACAGTACGGTTG+AGG | 0.513519 | 2_4:+39735041 | None:intergenic |
AACATGTTCTGGTGGCCAGC+CGG | 0.515403 | 2_4:-39735328 | Msa0327780:CDS |
TTAAGAAAAGAAGGATTCAA+AGG | 0.515731 | 2_4:+39726814 | None:intergenic |
CCGTCCTGGGAGCATTATGC+AGG | 0.517123 | 2_4:-39727014 | Msa0327780:CDS |
GGGAGGAAGAAGAACGGGAA+CGG | 0.518287 | 2_4:-39732692 | Msa0327780:CDS |
AGGGGAGAAACGGGAACGGG+AGG | 0.518667 | 2_4:-39732709 | Msa0327780:CDS |
TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 2_4:-39729309 | Msa0327780:CDS |
CTGGTGGATACTGGAAAGCC+AGG | 0.518819 | 2_4:-39728317 | Msa0327780:CDS |
GGCAGCCGCGGCAAATGTCT+GGG | 0.520346 | 2_4:+39729339 | None:intergenic |
GTGTGAGGCGTTCCTCCCTC+AGG | 0.520495 | 2_4:+39728365 | None:intergenic |
TGTATTGCCTCGACCACAAA+GGG | 0.520587 | 2_4:+39730070 | None:intergenic |
AATACTAGTCCTCTTTGCAA+TGG | 0.521201 | 2_4:-39729852 | Msa0327780:CDS |
CTGAGCCTATTCAACCACTT+TGG | 0.522499 | 2_4:-39734496 | Msa0327780:CDS |
ATCTATGAAGTGGGCAGCCG+CGG | 0.523740 | 2_4:+39729327 | None:intergenic |
TATTATCTTGACTGTGGACA+CGG | 0.524989 | 2_4:-39734866 | Msa0327780:CDS |
CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 2_4:-39730133 | Msa0327780:CDS |
ATAGACAACAGTACGGTTGA+GGG | 0.530612 | 2_4:+39735042 | None:intergenic |
TTTGTTGTACATCAGGTGAC+TGG | 0.533031 | 2_4:-39728214 | Msa0327780:intron |
TAAGAAAAGAAGGATTCAAA+GGG | 0.534209 | 2_4:+39726815 | None:intergenic |
AGGCAACTTATAATTGCCTA+AGG | 0.535020 | 2_4:+39726274 | None:intergenic |
AACGATGGCGGCTCTTGGTG+TGG | 0.535553 | 2_4:-39734791 | Msa0327780:CDS |
TCTATAGCTGCAAATTGAAG+TGG | 0.536075 | 2_4:+39726323 | None:intergenic |
ATCCCTATTGCCTGACCACA+AGG | 0.540723 | 2_4:+39734601 | None:intergenic |
AAATTTCTGAATTGTTGGAT+CGG | 0.547169 | 2_4:+39735135 | None:intergenic |
CTCACCTCAACTCTGTCACC+TGG | 0.549979 | 2_4:+39728299 | None:intergenic |
ATCTTGCATTATCTATGAAG+TGG | 0.550073 | 2_4:+39729317 | None:intergenic |
ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 2_4:-39729310 | Msa0327780:CDS |
TTGGTACTGAAGGACGTGGC+AGG | 0.552068 | 2_4:-39730014 | Msa0327780:intron |
CTTTGGTGTGTTAGGAACCC+TGG | 0.555049 | 2_4:-39734479 | Msa0327780:intron |
CGGTTGAGGGATAAAATGAA+AGG | 0.561852 | 2_4:+39735055 | None:intergenic |
AAAGTGATAGGAGAAGTTGC+TGG | 0.567098 | 2_4:-39732907 | Msa0327780:CDS |
AGAAATATGCAGCACAGGGT+GGG | 0.567302 | 2_4:-39726876 | Msa0327780:CDS |
ATGCAACACCTCCTCTGGTG+TGG | 0.571539 | 2_4:+39729407 | None:intergenic |
CTGCAATGGCTGAGTCCTTG+TGG | 0.573090 | 2_4:-39734616 | Msa0327780:CDS |
CGAATCCAAAACAGTTTCAT+CGG | 0.574123 | 2_4:+39734658 | None:intergenic |
CGACGTCATCAGCACCAGAA+TGG | 0.582990 | 2_4:+39735176 | None:intergenic |
ACTTCATAGATAATGCAAGA+TGG | 0.584523 | 2_4:-39729315 | Msa0327780:CDS |
TGTTGTTGATAAACGTCTCA+AGG | 0.587054 | 2_4:+39735083 | None:intergenic |
GGGAACGGGAGGAAGAAGAA+CGG | 0.587711 | 2_4:-39732698 | Msa0327780:CDS |
ATTGGTTGAGATCTGACAGA+AGG | 0.589843 | 2_4:-39727054 | Msa0327780:CDS |
GGTTGAGGGATAAAATGAAA+GGG | 0.590587 | 2_4:+39735056 | None:intergenic |
CAGAAATATGCAGCACAGGG+TGG | 0.591099 | 2_4:-39726877 | Msa0327780:CDS |
TGAGAATCGTCGATGGAACA+TGG | 0.591958 | 2_4:+39734990 | None:intergenic |
AAAATGTGTTGCTATCATGA+AGG | 0.593996 | 2_4:-39727994 | Msa0327780:CDS |
CAGGAGTTTCCATTGCAAAG+AGG | 0.596729 | 2_4:+39729843 | None:intergenic |
GTGATAGGAGAAGTTGCTGG+TGG | 0.599516 | 2_4:-39732904 | Msa0327780:CDS |
AGATAATGCAAGATGGGATG+GGG | 0.599941 | 2_4:-39729308 | Msa0327780:CDS |
TTGGTTGAGATCTGACAGAA+GGG | 0.602460 | 2_4:-39727053 | Msa0327780:CDS |
TGATGACAAAACTGTACCAA+AGG | 0.605343 | 2_4:-39729371 | Msa0327780:CDS |
TTGGCCTAGAACTTCTGCAA+TGG | 0.607551 | 2_4:-39734630 | Msa0327780:CDS |
TGGGAAATCTCTATTCATGA+AGG | 0.608432 | 2_4:-39732884 | Msa0327780:CDS |
GACTTCTATTATCTTGACTG+TGG | 0.608516 | 2_4:-39734872 | Msa0327780:CDS |
CTTTAACAAGATCATTCAAG+CGG | 0.617914 | 2_4:-39730544 | Msa0327780:CDS |
TCAACCTGCATAATGCTCCC+AGG | 0.618526 | 2_4:+39727010 | None:intergenic |
TGATAGGAGAAGTTGCTGGT+GGG | 0.619992 | 2_4:-39732903 | Msa0327780:CDS |
TCTTGCATTATCTATGAAGT+GGG | 0.621537 | 2_4:+39729318 | None:intergenic |
TCAGGCAATAGGGATGAAAA+GGG | 0.628998 | 2_4:-39734593 | Msa0327780:CDS |
GAATGAATGGAGAAGCAGAA+TGG | 0.631006 | 2_4:-39734537 | Msa0327780:CDS |
TATAAGAACCACACCAGAGG+AGG | 0.636996 | 2_4:-39729415 | Msa0327780:CDS |
AAAGCCAGGTGACAGAGTTG+AGG | 0.641668 | 2_4:-39728303 | Msa0327780:intron |
TTGTTGCTAATCTTCCACCT+CGG | 0.643102 | 2_4:+39726440 | None:intergenic |
ATGTATTGCCTCGACCACAA+AGG | 0.643641 | 2_4:+39730069 | None:intergenic |
ACTATTGCATGACAAACTGG+TGG | 0.645480 | 2_4:-39728333 | Msa0327780:CDS |
ATACAGGGCTATGAATGTCA+AGG | 0.646972 | 2_4:-39728188 | Msa0327780:CDS |
TATGAGACCGATTAAACTCG+AGG | 0.649881 | 2_4:-39729455 | Msa0327780:CDS |
CTGATGATGACACGATGGCG+CGG | 0.650072 | 2_4:+39734894 | None:intergenic |
TTGCAGAAATATGCAGCACA+GGG | 0.650088 | 2_4:-39726880 | Msa0327780:intron |
CCTGCATAATGCTCCCAGGA+CGG | 0.650448 | 2_4:+39727014 | None:intergenic |
CATCGCGTATGACATTCTGC+AGG | 0.653326 | 2_4:+39735227 | None:intergenic |
GACATTCTGCAGGACTTGGT+AGG | 0.653628 | 2_4:+39735237 | None:intergenic |
TCTTTAGTGAGAATCGTCGA+TGG | 0.658594 | 2_4:+39734983 | None:intergenic |
GGAAAGGGCCGTCACAACTG+CGG | 0.659297 | 2_4:-39732670 | Msa0327780:CDS |
CAGGGCTATGAATGTCAAGG+TGG | 0.661008 | 2_4:-39728185 | Msa0327780:CDS |
TCAGGTGACTGGTATATACA+GGG | 0.661864 | 2_4:-39728203 | Msa0327780:intron |
AATAGTAAGCTAACAGTGTG+AGG | 0.667908 | 2_4:+39728350 | None:intergenic |
GGAAAGCATTACACACCAAG+AGG | 0.670420 | 2_4:-39729264 | Msa0327780:intron |
TCTCTCTTACTCTTCCTCAC+CGG | 0.671004 | 2_4:+39732632 | None:intergenic |
AGGGCTATGAATGTCAAGGT+GGG | 0.671069 | 2_4:-39728184 | Msa0327780:CDS |
AGAAGGGAAGATGATCTTGG+TGG | 0.671197 | 2_4:-39727037 | Msa0327780:CDS |
CAATATAAGAACCACACCAG+AGG | 0.676256 | 2_4:-39729418 | Msa0327780:CDS |
CTTAACCCAGACATTTGCCG+CGG | 0.676329 | 2_4:-39729344 | Msa0327780:CDS |
CTTCCCAATAGACAACAGTA+CGG | 0.678240 | 2_4:+39735035 | None:intergenic |
GACACCTGACGAGATACCTG+AGG | 0.684151 | 2_4:-39728381 | Msa0327780:CDS |
GGGTTCCTAACACACCAAAG+TGG | 0.688027 | 2_4:+39734482 | None:intergenic |
ACACCTGACGAGATACCTGA+GGG | 0.690721 | 2_4:-39728380 | Msa0327780:CDS |
ATTCAAGCGGTATCTGACTG+AGG | 0.705680 | 2_4:-39730531 | Msa0327780:CDS |
GAAGTCTGATGATGACACGA+TGG | 0.708731 | 2_4:+39734889 | None:intergenic |
GGGTTTGAAGCGATACACAG+AGG | 0.714644 | 2_4:-39734573 | Msa0327780:CDS |
AGAAGCAGAATGGTGAACAG+AGG | 0.721002 | 2_4:-39734527 | Msa0327780:CDS |
CATGTGCTAACATGTTCTGG+TGG | 0.723594 | 2_4:-39735336 | None:intergenic |
TAGGTGGGGAGGTAGCGTTG+TGG | 0.723910 | 2_4:-39734691 | Msa0327780:CDS |
CCTGACGAGATACCTGAGGG+AGG | 0.736290 | 2_4:-39728377 | Msa0327780:CDS |
AAATTGTTCCGGGAACAATG+TGG | 0.768274 | 2_4:+39735201 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTATTTTACTTTTAATC+TGG | - | chr2_4:39727251-39727270 | Msa0327780:intron | 10.0% |
!!! | TGTTATTAATATGTTTTATT+TGG | - | chr2_4:39730799-39730818 | Msa0327780:intron | 10.0% |
!!! | TTACTGAAATTGATAATTTT+AGG | - | chr2_4:39728537-39728556 | Msa0327780:intron | 15.0% |
!!! | ATTTTTGTTTTGTTTTGTTT+TGG | - | chr2_4:39728700-39728719 | Msa0327780:intron | 15.0% |
!!! | ATTTTTGTTTTGTTTTGTTT+TGG | - | chr2_4:39728700-39728719 | Msa0327780:intron | 15.0% |
!! | TGAAAAGAAAGAAAAAAAAA+GGG | - | chr2_4:39728776-39728795 | Msa0327780:intron | 15.0% |
!! | AAGTAACTAAAGAAAAATTA+GGG | - | chr2_4:39729103-39729122 | Msa0327780:intron | 15.0% |
!! | TAATCTAAATCAACTAATTT+AGG | - | chr2_4:39729248-39729267 | Msa0327780:intron | 15.0% |
!! | AATCTAAATCAACTAATTTA+GGG | - | chr2_4:39729249-39729268 | Msa0327780:intron | 15.0% |
!! | ATTCTTATTGTATATGAAAA+AGG | - | chr2_4:39729466-39729485 | Msa0327780:CDS | 15.0% |
!!! | ATTGATTTTGAATTTTTAGA+CGG | - | chr2_4:39729564-39729583 | Msa0327780:intron | 15.0% |
!! | TATAACTTACATATTTGAAA+TGG | + | chr2_4:39730336-39730355 | None:intergenic | 15.0% |
!!! | TGGTTATATACTTTTTTTAT+AGG | - | chr2_4:39731727-39731746 | Msa0327780:intron | 15.0% |
!!! | ATTTAAAACAGATGAATTAA+AGG | + | chr2_4:39731969-39731988 | None:intergenic | 15.0% |
!!! | TTCTTATTTTATATCAAATG+AGG | + | chr2_4:39732522-39732541 | None:intergenic | 15.0% |
!!! | TTTTTTTTTGCTAAATTAGA+CGG | - | chr2_4:39732812-39732831 | Msa0327780:intron | 15.0% |
!! | AATAATTATTTAAACTGTAC+TGG | - | chr2_4:39732911-39732930 | Msa0327780:CDS | 15.0% |
!! | ATAATTATTTAAACTGTACT+GGG | - | chr2_4:39732912-39732931 | Msa0327780:CDS | 15.0% |
!! | ATCAATATATTTATCATACA+AGG | + | chr2_4:39733539-39733558 | None:intergenic | 15.0% |
!! | ATATATAAGTAATTACTTGA+TGG | + | chr2_4:39734557-39734576 | None:intergenic | 15.0% |
!! | TTCATAGCTATTATTATATT+TGG | - | chr2_4:39734919-39734938 | Msa0327780:CDS | 15.0% |
!! | CAGAAATTTCTATCAAATAA+TGG | - | chr2_4:39726383-39726402 | Msa0327780:three_prime_UTR | 20.0% |
!!! | ACATTTGTAGTTAGTTTAAT+TGG | - | chr2_4:39727161-39727180 | Msa0327780:intron | 20.0% |
!!! | TGAAACAATAAATTTTCAGT+AGG | + | chr2_4:39727302-39727321 | None:intergenic | 20.0% |
!! | TCATATATGCAAATTCAATT+AGG | - | chr2_4:39727580-39727599 | Msa0327780:intron | 20.0% |
!! | TTAGATATTGAATCTTAGTT+CGG | + | chr2_4:39727947-39727966 | None:intergenic | 20.0% |
!! | TGAGTGTTTATACTATATAT+AGG | - | chr2_4:39728173-39728192 | Msa0327780:CDS | 20.0% |
!! | TTTAATTAAACCTAATTACC+TGG | + | chr2_4:39728495-39728514 | None:intergenic | 20.0% |
!! | GTGAAAAGAAAGAAAAAAAA+AGG | - | chr2_4:39728775-39728794 | Msa0327780:intron | 20.0% |
!! | GAAAAGAAAGAAAAAAAAAG+GGG | - | chr2_4:39728777-39728796 | Msa0327780:intron | 20.0% |
!! | GAAGTAACTAAAGAAAAATT+AGG | - | chr2_4:39729102-39729121 | Msa0327780:intron | 20.0% |
!! | AGTAACTAAAGAAAAATTAG+GGG | - | chr2_4:39729104-39729123 | Msa0327780:intron | 20.0% |
!! | ATCTAAATCAACTAATTTAG+GGG | - | chr2_4:39729250-39729269 | Msa0327780:intron | 20.0% |
!!! | TTGATTTTGAATTTTTAGAC+GGG | - | chr2_4:39729565-39729584 | Msa0327780:intron | 20.0% |
!! | GAAATTGATTACTTTGAATT+TGG | - | chr2_4:39729738-39729757 | Msa0327780:intron | 20.0% |
!! | ATTACTTTGAATTTGGATAT+GGG | - | chr2_4:39729745-39729764 | Msa0327780:intron | 20.0% |
!!! | ATCTAAGATTTGATATGTTA+TGG | - | chr2_4:39730033-39730052 | Msa0327780:CDS | 20.0% |
!! | ATATTTGTTTATACGCTTAA+AGG | + | chr2_4:39730113-39730132 | None:intergenic | 20.0% |
!! | TACCAAACTAAATATAAACA+TGG | - | chr2_4:39730354-39730373 | Msa0327780:intron | 20.0% |
!! | ATCCATGTTTATATTTAGTT+TGG | + | chr2_4:39730359-39730378 | None:intergenic | 20.0% |
!! | AAAATTTCCAAGATAATATC+CGG | + | chr2_4:39730382-39730401 | None:intergenic | 20.0% |
!! | CAAAATAAAAAAAAGTGACA+GGG | + | chr2_4:39730498-39730517 | None:intergenic | 20.0% |
!! | TCAAAATAAAAAAAAGTGAC+AGG | + | chr2_4:39730499-39730518 | None:intergenic | 20.0% |
!!! | AATGATTTTCTTGATTACTA+AGG | - | chr2_4:39730635-39730654 | Msa0327780:intron | 20.0% |
!! | TTATTTGGTATGATGATTAA+AGG | - | chr2_4:39730814-39730833 | Msa0327780:intron | 20.0% |
!!! | TCTATTTTCATAAGCTATAT+TGG | - | chr2_4:39731148-39731167 | Msa0327780:intron | 20.0% |
!!! | GTAAAGTGCTTTATTTAAAA+TGG | - | chr2_4:39731325-39731344 | Msa0327780:intron | 20.0% |
!! | CAAAAATTAGATTTGAGAAT+CGG | + | chr2_4:39731413-39731432 | None:intergenic | 20.0% |
!!! | CACTTTTTATGATCTTAAAA+TGG | - | chr2_4:39731539-39731558 | Msa0327780:intron | 20.0% |
!!! | TTTCTACTTATATTTAAGGT+CGG | + | chr2_4:39731783-39731802 | None:intergenic | 20.0% |
!! | AACCTTTCTACTTATATTTA+AGG | + | chr2_4:39731787-39731806 | None:intergenic | 20.0% |
!!! | GATACTTTATTTAGTACAAA+AGG | + | chr2_4:39732385-39732404 | None:intergenic | 20.0% |
!! | TTGACTTTGATGTTATATAT+TGG | + | chr2_4:39732409-39732428 | None:intergenic | 20.0% |
!!! | AGATTTTTAAGTATTTGAGA+TGG | - | chr2_4:39732694-39732713 | Msa0327780:CDS | 20.0% |
!! | AAAACACATTGTTCAAAATA+GGG | + | chr2_4:39732980-39732999 | None:intergenic | 20.0% |
!!! | AACATATCTTTTCTAATTTC+AGG | - | chr2_4:39733068-39733087 | Msa0327780:intron | 20.0% |
!! | TTACTGATAAACAAATTATG+AGG | - | chr2_4:39733092-39733111 | Msa0327780:intron | 20.0% |
!! | ATAAATATATTGATGAGCAT+GGG | - | chr2_4:39733545-39733564 | Msa0327780:intron | 20.0% |
!!! | TATGTGTTGTTTAATTTTTC+AGG | - | chr2_4:39733744-39733763 | Msa0327780:intron | 20.0% |
!!! | GAAGAAAGGTTTTAAAATTT+TGG | - | chr2_4:39733995-39734014 | Msa0327780:intron | 20.0% |
!! | AAATCCATGATTTACTAAAA+AGG | + | chr2_4:39734800-39734819 | None:intergenic | 20.0% |
!! | TTAACAGTAAAAGATTAGAA+TGG | + | chr2_4:39734960-39734979 | None:intergenic | 20.0% |
!! | TTGTAATTGTATATAACCTT+AGG | - | chr2_4:39735214-39735233 | Msa0327780:CDS | 20.0% |
!!! | TGAATCCATTGATTTTAATT+AGG | + | chr2_4:39735259-39735278 | None:intergenic | 20.0% |
!!! | CATATCAATTTTTCTTAACT+GGG | + | chr2_4:39735314-39735333 | None:intergenic | 20.0% |
! | AAATTTCTGAATTGTTGGAT+CGG | + | chr2_4:39726372-39726391 | None:intergenic | 25.0% |
! | GATAGAAATTTCTGAATTGT+TGG | + | chr2_4:39726377-39726396 | None:intergenic | 25.0% |
!!! | ATAGTTTGCCATGTTTTAAA+AGG | + | chr2_4:39726740-39726759 | None:intergenic | 25.0% |
! | AAACTAACTACAAATGTGTT+TGG | + | chr2_4:39727158-39727177 | None:intergenic | 25.0% |
! | AGTTATCAAACAATGTTACA+TGG | - | chr2_4:39727336-39727355 | Msa0327780:intron | 25.0% |
! | CAACATCAATACTAAACATA+TGG | + | chr2_4:39727507-39727526 | None:intergenic | 25.0% |
!!! | CATATGTTTAGTATTGATGT+TGG | - | chr2_4:39727505-39727524 | Msa0327780:intron | 25.0% |
! | CATGAACAAGAATTTAACAA+AGG | + | chr2_4:39727699-39727718 | None:intergenic | 25.0% |
!!! | ACATATGACTTTTTTCAGTA+TGG | + | chr2_4:39727733-39727752 | None:intergenic | 25.0% |
! | AGTTTAGTAGATTTAAGCTA+AGG | + | chr2_4:39728079-39728098 | None:intergenic | 25.0% |
!!! | CATTTTGGTAAATTGGTAAT+TGG | - | chr2_4:39728150-39728169 | Msa0327780:CDS | 25.0% |
! | TGATGATTAATTCATCATGA+GGG | + | chr2_4:39728388-39728407 | None:intergenic | 25.0% |
!! | TTGATGATTAATTCATCATG+AGG | + | chr2_4:39728389-39728408 | None:intergenic | 25.0% |
! | TGAATGAATTGAAAGATTGA+AGG | + | chr2_4:39728470-39728489 | None:intergenic | 25.0% |
!!! | TTTTGTTTTGTTTTGGATTG+TGG | - | chr2_4:39728707-39728726 | Msa0327780:intron | 25.0% |
! | GTTTGATTGAAAATTTGTGA+TGG | - | chr2_4:39728977-39728996 | Msa0327780:intron | 25.0% |
! | TTGATTTAGATTATGCATGA+GGG | + | chr2_4:39729241-39729260 | None:intergenic | 25.0% |
! | ATTCAATCAAATTATTCCAG+TGG | + | chr2_4:39729428-39729447 | None:intergenic | 25.0% |
! | ACTGGAATAATTTGATTGAA+TGG | - | chr2_4:39729427-39729446 | Msa0327780:CDS | 25.0% |
! | CTGGAATAATTTGATTGAAT+GGG | - | chr2_4:39729428-39729447 | Msa0327780:CDS | 25.0% |
!!! | ATTTGATTGAATGGGTTTTA+TGG | - | chr2_4:39729436-39729455 | Msa0327780:CDS | 25.0% |
! | CATATGAATGATTCAATCAT+AGG | - | chr2_4:39729654-39729673 | Msa0327780:intron | 25.0% |
!! | TGATTCAATCATAGGTTTTA+TGG | - | chr2_4:39729662-39729681 | Msa0327780:intron | 25.0% |
! | GATTACTTTGAATTTGGATA+TGG | - | chr2_4:39729744-39729763 | Msa0327780:intron | 25.0% |
! | ATTGAGTGAATTATATGTTC+AGG | - | chr2_4:39729914-39729933 | Msa0327780:intron | 25.0% |
!! | AACCTTTTTATTCACTATGT+TGG | + | chr2_4:39730002-39730021 | None:intergenic | 25.0% |
! | ACTAAATATAAACATGGATC+CGG | - | chr2_4:39730360-39730379 | Msa0327780:intron | 25.0% |
!! | TCAAGAAAATCATTCTTTTG+AGG | + | chr2_4:39730629-39730648 | None:intergenic | 25.0% |
!!! | TTTGTTTTGTTGTTTGATTG+TGG | - | chr2_4:39730699-39730718 | Msa0327780:intron | 25.0% |
! | ATGATTAAAGGAAACTGATA+AGG | - | chr2_4:39730826-39730845 | Msa0327780:intron | 25.0% |
! | ACTTATATGATAAGTGTGAA+TGG | + | chr2_4:39731060-39731079 | None:intergenic | 25.0% |
! | GACCTTAAATATAAGTAGAA+AGG | - | chr2_4:39731782-39731801 | Msa0327780:intron | 25.0% |
!!! | ACAAATACATGTACCTTTTT+TGG | - | chr2_4:39731819-39731838 | Msa0327780:intron | 25.0% |
!!! | ACCTTTTTTGGTCAAATATA+AGG | - | chr2_4:39731831-39731850 | Msa0327780:intron | 25.0% |
! | ACTTTCTTCTCAAAATCATT+TGG | - | chr2_4:39731895-39731914 | Msa0327780:intron | 25.0% |
! | CTTTCTTCTCAAAATCATTT+GGG | - | chr2_4:39731896-39731915 | Msa0327780:intron | 25.0% |
! | ATAACATCAAAGTCAATAGT+AGG | - | chr2_4:39732413-39732432 | Msa0327780:intron | 25.0% |
!! | TCTCAATGACTACAAAATTT+TGG | - | chr2_4:39732482-39732501 | Msa0327780:intron | 25.0% |
!!! | CTTGTTATTATGCATCATAT+AGG | + | chr2_4:39732664-39732683 | None:intergenic | 25.0% |
! | TAAAAGAGATGGGAAAATAT+TGG | + | chr2_4:39732727-39732746 | None:intergenic | 25.0% |
! | AAACACATTGTTCAAAATAG+GGG | + | chr2_4:39732979-39732998 | None:intergenic | 25.0% |
! | CAAAACACATTGTTCAAAAT+AGG | + | chr2_4:39732981-39733000 | None:intergenic | 25.0% |
!!! | CTATTTTGAACAATGTGTTT+TGG | - | chr2_4:39732979-39732998 | Msa0327780:intron | 25.0% |
! | ATATTCTCATGTTTGTTCAA+TGG | - | chr2_4:39733255-39733274 | Msa0327780:intron | 25.0% |
! | GATTCATTTCATTGTTCTAA+AGG | - | chr2_4:39733486-39733505 | Msa0327780:intron | 25.0% |
! | GATAAATATATTGATGAGCA+TGG | - | chr2_4:39733544-39733563 | Msa0327780:intron | 25.0% |
! | TAAATATATTGATGAGCATG+GGG | - | chr2_4:39733546-39733565 | Msa0327780:intron | 25.0% |
! | TGTTTAAGAATCCGAAAAAA+GGG | - | chr2_4:39734159-39734178 | Msa0327780:intron | 25.0% |
! | CTGTATTGTGAAATCTTTAA+AGG | - | chr2_4:39734327-39734346 | Msa0327780:intron | 25.0% |
! | GAAAAAAATCTGATTGGTAA+AGG | + | chr2_4:39734361-39734380 | None:intergenic | 25.0% |
! | GTGAATGAAAAAAATCTGAT+TGG | + | chr2_4:39734367-39734386 | None:intergenic | 25.0% |
! | CATAAAAGCAAATAGATAAG+TGG | + | chr2_4:39734414-39734433 | None:intergenic | 25.0% |
!!! | TCTATTTGCTTTTATGCAAA+TGG | - | chr2_4:39734418-39734437 | Msa0327780:intron | 25.0% |
! | ATGTTTACAATGAAAAACTC+AGG | + | chr2_4:39734654-39734673 | None:intergenic | 25.0% |
!! | TTTTTCATTGTAAACATCTG+TGG | - | chr2_4:39734657-39734676 | Msa0327780:CDS | 25.0% |
! | TAAGAAAAGAAGGATTCAAA+GGG | + | chr2_4:39734692-39734711 | None:intergenic | 25.0% |
! | TTAAGAAAAGAAGGATTCAA+AGG | + | chr2_4:39734693-39734712 | None:intergenic | 25.0% |
! | AAAGAAACCTACTTTAGATA+TGG | + | chr2_4:39734729-39734748 | None:intergenic | 25.0% |
!!! | CTTTCCTTTTTAGTAAATCA+TGG | - | chr2_4:39734793-39734812 | Msa0327780:CDS | 25.0% |
! | TTAATCATGAAATTGCAAGT+TGG | - | chr2_4:39734818-39734837 | Msa0327780:CDS | 25.0% |
! | AATTAATCAAAGTTCTCAAG+TGG | - | chr2_4:39734881-39734900 | Msa0327780:CDS | 25.0% |
!!! | CATTGATTTTAATTAGGCAA+AGG | + | chr2_4:39735253-39735272 | None:intergenic | 25.0% |
! | CTTTGCCTAATTAAAATCAA+TGG | - | chr2_4:39735251-39735270 | Msa0327780:CDS | 25.0% |
!! | GCATATCAATTTTTCTTAAC+TGG | + | chr2_4:39735315-39735334 | None:intergenic | 25.0% |
ACTAAAAGGATAGTATCTTC+TGG | - | chr2_4:39726584-39726603 | Msa0327780:intron | 30.0% | |
CAACAGATAGATTGAATGAA+TGG | - | chr2_4:39726954-39726973 | Msa0327780:intron | 30.0% | |
ATTGTGAACTCTATTGCTAT+TGG | + | chr2_4:39727561-39727580 | None:intergenic | 30.0% | |
! | ATTAGGAGCATATTGCATAT+TGG | - | chr2_4:39727597-39727616 | Msa0327780:intron | 30.0% |
TATTGCATATTGGATTGAAG+AGG | - | chr2_4:39727607-39727626 | Msa0327780:intron | 30.0% | |
!!! | ATTCTGAAGCTATCTTTTGT+GGG | + | chr2_4:39727796-39727815 | None:intergenic | 30.0% |
!!! | TCTTTTCTTTTTTGACCATG+AGG | + | chr2_4:39727871-39727890 | None:intergenic | 30.0% |
! | TTGACCATTTTACCCTTATT+AGG | - | chr2_4:39728125-39728144 | Msa0327780:intron | 30.0% |
! | TGACCATTTTACCCTTATTA+GGG | - | chr2_4:39728126-39728145 | Msa0327780:intron | 30.0% |
! | TTTGCATGATGATTTTCATG+GGG | + | chr2_4:39728352-39728371 | None:intergenic | 30.0% |
! | GTTTGCATGATGATTTTCAT+GGG | + | chr2_4:39728353-39728372 | None:intergenic | 30.0% |
! | AGTTTGCATGATGATTTTCA+TGG | + | chr2_4:39728354-39728373 | None:intergenic | 30.0% |
AATTGAAAGATTGAAGGATG+GGG | + | chr2_4:39728464-39728483 | None:intergenic | 30.0% | |
GAATTGAAAGATTGAAGGAT+GGG | + | chr2_4:39728465-39728484 | None:intergenic | 30.0% | |
TGAATTGAAAGATTGAAGGA+TGG | + | chr2_4:39728466-39728485 | None:intergenic | 30.0% | |
TCTTTCAATTCATTCATTCC+AGG | - | chr2_4:39728474-39728493 | Msa0327780:intron | 30.0% | |
TTCATTCATTCCAGGTAATT+AGG | - | chr2_4:39728482-39728501 | Msa0327780:intron | 30.0% | |
!!! | AGGTTTGATGCTTTTGATTT+TGG | - | chr2_4:39728557-39728576 | Msa0327780:intron | 30.0% |
ATCTGTAGAAGTAAAGTGAT+AGG | - | chr2_4:39728585-39728604 | Msa0327780:intron | 30.0% | |
TGTGATAGATAGATTGTTGA+AGG | - | chr2_4:39728649-39728668 | Msa0327780:intron | 30.0% | |
AGAAAAAAAAAGGGGAGAAA+CGG | - | chr2_4:39728785-39728804 | Msa0327780:intron | 30.0% | |
TCTAATTCTAATCTTGCATG+TGG | - | chr2_4:39728954-39728973 | Msa0327780:intron | 30.0% | |
CTAATTCTAATCTTGCATGT+GGG | - | chr2_4:39728955-39728974 | Msa0327780:intron | 30.0% | |
TGTGAGAAGAATGTTAAGTT+TGG | - | chr2_4:39729003-39729022 | Msa0327780:intron | 30.0% | |
GTGAGAAGAATGTTAAGTTT+GGG | - | chr2_4:39729004-39729023 | Msa0327780:intron | 30.0% | |
AATGTTAAGTTTGGGTAAGA+GGG | - | chr2_4:39729012-39729031 | Msa0327780:intron | 30.0% | |
AGAGTAGAAGAAATGGAATT+AGG | - | chr2_4:39729065-39729084 | Msa0327780:intron | 30.0% | |
GAGTAGAAGAAATGGAATTA+GGG | - | chr2_4:39729066-39729085 | Msa0327780:intron | 30.0% | |
CCTTTAATTCTTTATGGTGA+TGG | + | chr2_4:39729198-39729217 | None:intergenic | 30.0% | |
CCATCACCATAAAGAATTAA+AGG | - | chr2_4:39729195-39729214 | Msa0327780:intron | 30.0% | |
TCACCATAAAGAATTAAAGG+TGG | - | chr2_4:39729198-39729217 | Msa0327780:intron | 30.0% | |
CACCATAAAGAATTAAAGGT+GGG | - | chr2_4:39729199-39729218 | Msa0327780:intron | 30.0% | |
AACCCACCTTTAATTCTTTA+TGG | + | chr2_4:39729204-39729223 | None:intergenic | 30.0% | |
! | GTTGATTTAGATTATGCATG+AGG | + | chr2_4:39729242-39729261 | None:intergenic | 30.0% |
TGAATGATAGCATGATTGAA+AGG | - | chr2_4:39729389-39729408 | Msa0327780:CDS | 30.0% | |
GGAGATTATAAAAATGAGCT+AGG | - | chr2_4:39729487-39729506 | Msa0327780:intron | 30.0% | |
!! | TTTATTGCAGCAGTTGATAA+AGG | - | chr2_4:39729960-39729979 | Msa0327780:intron | 30.0% |
TGCCAACATAGTGAATAAAA+AGG | - | chr2_4:39729997-39730016 | Msa0327780:intron | 30.0% | |
TCTCGCATAAACATATATGT+TGG | - | chr2_4:39730207-39730226 | Msa0327780:intron | 30.0% | |
! | TCTTTGAAAGAGTTGCTTTA+TGG | - | chr2_4:39730275-39730294 | Msa0327780:intron | 30.0% |
!! | AATGTTTTCTGTTACTTGAC+AGG | - | chr2_4:39730522-39730541 | Msa0327780:CDS | 30.0% |
!! | ATGTTTTCTGTTACTTGACA+GGG | - | chr2_4:39730523-39730542 | Msa0327780:CDS | 30.0% |
!!! | TTGTTGTTTGATTGTGGTTT+TGG | - | chr2_4:39730705-39730724 | Msa0327780:intron | 30.0% |
TTAAAGGAAACTGATAAGGT+TGG | - | chr2_4:39730830-39730849 | Msa0327780:intron | 30.0% | |
CTTTAACAAGATCATTCAAG+CGG | - | chr2_4:39730960-39730979 | Msa0327780:CDS | 30.0% | |
!! | AACAATCCTAGAAGTGTTTA+TGG | - | chr2_4:39731239-39731258 | Msa0327780:intron | 30.0% |
TAATTAGACCATGTTTGGAT+TGG | + | chr2_4:39731286-39731305 | None:intergenic | 30.0% | |
ACAGATAATTAGACCATGTT+TGG | + | chr2_4:39731291-39731310 | None:intergenic | 30.0% | |
TATAGAATCGATCACTATCT+TGG | - | chr2_4:39731357-39731376 | Msa0327780:intron | 30.0% | |
! | ATCTAATTTTTGACCCTTTG+TGG | - | chr2_4:39731421-39731440 | Msa0327780:intron | 30.0% |
! | TTGATATTCTCAGCAGATTT+TGG | - | chr2_4:39731471-39731490 | Msa0327780:intron | 30.0% |
! | AAAAAGTGTAAATGCTGCAA+AGG | + | chr2_4:39731527-39731546 | None:intergenic | 30.0% |
TGTAGGTACTTTGACAATTA+TGG | - | chr2_4:39731593-39731612 | Msa0327780:intron | 30.0% | |
AGAGGACATTAGAAATGAAA+AGG | - | chr2_4:39731697-39731716 | Msa0327780:intron | 30.0% | |
! | TACTTATATTTAAGGTCGGA+GGG | + | chr2_4:39731779-39731798 | None:intergenic | 30.0% |
GCCTTATATTTGACCAAAAA+AGG | + | chr2_4:39731835-39731854 | None:intergenic | 30.0% | |
!! | TTTTTGGTCAAATATAAGGC+CGG | - | chr2_4:39731835-39731854 | Msa0327780:intron | 30.0% |
CATGACTTTCAATTGCTTAA+TGG | - | chr2_4:39732002-39732021 | Msa0327780:intron | 30.0% | |
!! | TACAGTTTTGTCATCAATGT+AGG | + | chr2_4:39732129-39732148 | None:intergenic | 30.0% |
TCTTGCATTATCTATGAAGT+GGG | + | chr2_4:39732189-39732208 | None:intergenic | 30.0% | |
ATCTTGCATTATCTATGAAG+TGG | + | chr2_4:39732190-39732209 | None:intergenic | 30.0% | |
ACTTCATAGATAATGCAAGA+TGG | - | chr2_4:39732189-39732208 | Msa0327780:intron | 30.0% | |
CTTCATAGATAATGCAAGAT+GGG | - | chr2_4:39732190-39732209 | Msa0327780:intron | 30.0% | |
TGTATTCTGTATTGTGACAT+TGG | + | chr2_4:39732461-39732480 | None:intergenic | 30.0% | |
TAACCAAGAAACACTTATTC+TGG | + | chr2_4:39732787-39732806 | None:intergenic | 30.0% | |
!! | GGTAGATTTTAGTGATAAGT+TGG | - | chr2_4:39732933-39732952 | Msa0327780:CDS | 30.0% |
! | TTTAGTGATAAGTTGGATGA+TGG | - | chr2_4:39732940-39732959 | Msa0327780:CDS | 30.0% |
!!! | TGGATTTTAGTTCATAAACC+TGG | - | chr2_4:39733034-39733053 | Msa0327780:intron | 30.0% |
ATATGTTAATTGCAGTTTCC+AGG | + | chr2_4:39733055-39733074 | None:intergenic | 30.0% | |
TAAACAAATTATGAGGCTTC+AGG | - | chr2_4:39733099-39733118 | Msa0327780:intron | 30.0% | |
! | ATCTATTTATCAGAGTGTCA+TGG | + | chr2_4:39733237-39733256 | None:intergenic | 30.0% |
ATGTACAACAAAACACTCAT+GGG | + | chr2_4:39733282-39733301 | None:intergenic | 30.0% | |
AGACAAGATGAAAAATGCAA+AGG | + | chr2_4:39733422-39733441 | None:intergenic | 30.0% | |
! | TGAATCATGCCAACTTTTAA+GGG | + | chr2_4:39733472-39733491 | None:intergenic | 30.0% |
! | ATGAATCATGCCAACTTTTA+AGG | + | chr2_4:39733473-39733492 | None:intergenic | 30.0% |
! | AAAATGTGTTGCTATCATGA+AGG | - | chr2_4:39733510-39733529 | Msa0327780:intron | 30.0% |
AACAATTGACAACAAATGCA+GGG | + | chr2_4:39733704-39733723 | None:intergenic | 30.0% | |
AAACAATTGACAACAAATGC+AGG | + | chr2_4:39733705-39733724 | None:intergenic | 30.0% | |
!! | TTTTCAGGAAATATACAGTC+TGG | - | chr2_4:39733759-39733778 | Msa0327780:intron | 30.0% |
ATCGAAAATTTAAACAGCGT+TGG | - | chr2_4:39733806-39733825 | Msa0327780:intron | 30.0% | |
GTTGGTTATCTACTCAAAAA+AGG | - | chr2_4:39733824-39733843 | Msa0327780:intron | 30.0% | |
AGAGTTGCACATTAATAAGA+TGG | + | chr2_4:39733916-39733935 | None:intergenic | 30.0% | |
TATTATCCTCTTTGTACTCA+CGG | - | chr2_4:39734048-39734067 | Msa0327780:intron | 30.0% | |
GTGTTTAAGAATCCGAAAAA+AGG | - | chr2_4:39734158-39734177 | Msa0327780:intron | 30.0% | |
! | AGCACATTCTTAAAGTATTC+CGG | + | chr2_4:39734216-39734235 | None:intergenic | 30.0% |
TCATCGAATATGCAATTTCA+AGG | - | chr2_4:39734253-39734272 | Msa0327780:intron | 30.0% | |
CATCGAATATGCAATTTCAA+GGG | - | chr2_4:39734254-39734273 | Msa0327780:intron | 30.0% | |
ATCGAATATGCAATTTCAAG+GGG | - | chr2_4:39734255-39734274 | Msa0327780:intron | 30.0% | |
AGCAAATAGATAAGTGGTTA+AGG | + | chr2_4:39734408-39734427 | None:intergenic | 30.0% | |
GTCATGATCTTAAGAAAAGA+AGG | + | chr2_4:39734702-39734721 | None:intergenic | 30.0% | |
!! | CTAATCTGAGTCTTTGAAAT+TGG | - | chr2_4:39734841-39734860 | Msa0327780:CDS | 30.0% |
! | CAATTTTTCTTAACTGGGTT+CGG | + | chr2_4:39735309-39735328 | None:intergenic | 30.0% |
CAGAATGGTAAAATTGTTCC+GGG | + | chr2_4:39726316-39726335 | None:intergenic | 35.0% | |
CCAGAATGGTAAAATTGTTC+CGG | + | chr2_4:39726317-39726336 | None:intergenic | 35.0% | |
! | TGTTGTTGATAAACGTCTCA+AGG | + | chr2_4:39726424-39726443 | None:intergenic | 35.0% |
GGTTGAGGGATAAAATGAAA+GGG | + | chr2_4:39726451-39726470 | None:intergenic | 35.0% | |
! | AACATGTGATTTTGCAGACA+TGG | - | chr2_4:39726543-39726562 | Msa0327780:intron | 35.0% |
! | ATTTTGCAGACATGGAACAA+TGG | - | chr2_4:39726551-39726570 | Msa0327780:intron | 35.0% |
ATGGACATGACAACACTAAA+AGG | - | chr2_4:39726570-39726589 | Msa0327780:intron | 35.0% | |
GACTTCTATTATCTTGACTG+TGG | - | chr2_4:39726632-39726651 | Msa0327780:intron | 35.0% | |
TATTATCTTGACTGTGGACA+CGG | - | chr2_4:39726638-39726657 | Msa0327780:intron | 35.0% | |
AGTATTTACGACAACCAAAC+AGG | - | chr2_4:39726680-39726699 | Msa0327780:intron | 35.0% | |
AACCAATTTCGCTTCTTCTT+CGG | + | chr2_4:39726792-39726811 | None:intergenic | 35.0% | |
!!! | GAAGAAGCGAAATTGGTTTT+AGG | - | chr2_4:39726794-39726813 | Msa0327780:CDS | 35.0% |
!!! | AAGCGAAATTGGTTTTAGGT+GGG | - | chr2_4:39726798-39726817 | Msa0327780:CDS | 35.0% |
CGAATCCAAAACAGTTTCAT+CGG | + | chr2_4:39726849-39726868 | None:intergenic | 35.0% | |
!! | CATGCCATTTAGTTTGTGTT+TGG | - | chr2_4:39727064-39727083 | Msa0327780:CDS | 35.0% |
CTCTCCAAACACAAACTAAA+TGG | + | chr2_4:39727071-39727090 | None:intergenic | 35.0% | |
! | TAGCTCTTTTTCCATTTGAG+AGG | + | chr2_4:39727219-39727238 | None:intergenic | 35.0% |
AAATTTCACCAAATGCTGCT+AGG | - | chr2_4:39727461-39727480 | Msa0327780:intron | 35.0% | |
AATTTCACCAAATGCTGCTA+GGG | - | chr2_4:39727462-39727481 | Msa0327780:intron | 35.0% | |
ACTAATCATGCACTAAGTTC+AGG | - | chr2_4:39727651-39727670 | Msa0327780:intron | 35.0% | |
!!! | CATTCTGAAGCTATCTTTTG+TGG | + | chr2_4:39727797-39727816 | None:intergenic | 35.0% |
AAGTGCACTTTAAATCCTCA+TGG | - | chr2_4:39727853-39727872 | Msa0327780:intron | 35.0% | |
! | GACCATTTTACCCTTATTAG+GGG | - | chr2_4:39728127-39728146 | Msa0327780:intron | 35.0% |
TACCAAAATGCCCCTAATAA+GGG | + | chr2_4:39728140-39728159 | None:intergenic | 35.0% | |
TTACCAAAATGCCCCTAATA+AGG | + | chr2_4:39728141-39728160 | None:intergenic | 35.0% | |
!!! | TTAGGGGCATTTTGGTAAAT+TGG | - | chr2_4:39728143-39728162 | Msa0327780:intron | 35.0% |
GGGGAAAATGATCTTAATTG+TGG | + | chr2_4:39728204-39728223 | None:intergenic | 35.0% | |
AGAGATGAGAGAGAAAATGA+GGG | + | chr2_4:39728225-39728244 | None:intergenic | 35.0% | |
! | ATTTTCTCTCTCATCTCTCA+CGG | - | chr2_4:39728227-39728246 | Msa0327780:intron | 35.0% |
! | GTGAGGATTGTAGAATTTTG+GGG | + | chr2_4:39728324-39728343 | None:intergenic | 35.0% |
! | GGTGAGGATTGTAGAATTTT+GGG | + | chr2_4:39728325-39728344 | None:intergenic | 35.0% |
! | TGATGATTTTCATGGGGTTT+GGG | + | chr2_4:39728346-39728365 | None:intergenic | 35.0% |
! | ATGATGATTTTCATGGGGTT+TGG | + | chr2_4:39728347-39728366 | None:intergenic | 35.0% |
TGGGAAATCTCTATTCATGA+AGG | - | chr2_4:39728620-39728639 | Msa0327780:intron | 35.0% | |
GAAAAAAAAAGGGGAGAAAC+GGG | - | chr2_4:39728786-39728805 | Msa0327780:intron | 35.0% | |
ATGCATGCATGACTTTAGAT+TGG | + | chr2_4:39728909-39728928 | None:intergenic | 35.0% | |
GAATGTTAAGTTTGGGTAAG+AGG | - | chr2_4:39729011-39729030 | Msa0327780:intron | 35.0% | |
!! | GGTTTTCAAGACTGAGTAAT+TGG | - | chr2_4:39729125-39729144 | Msa0327780:intron | 35.0% |
!! | AGGTTTATTGATTTAGCCAC+TGG | - | chr2_4:39729409-39729428 | Msa0327780:CDS | 35.0% |
ATAACTGCAACTTATGCAAC+TGG | + | chr2_4:39729592-39729611 | None:intergenic | 35.0% | |
CATAAGTTGCAGTTATAAGC+TGG | - | chr2_4:39729596-39729615 | Msa0327780:intron | 35.0% | |
ATAAAAGAAGCTTGCAGTTC+TGG | + | chr2_4:39729945-39729964 | None:intergenic | 35.0% | |
! | TTGAGTTGTAAACTGTCAAC+GGG | + | chr2_4:39730175-39730194 | None:intergenic | 35.0% |
! | GTTGAGTTGTAAACTGTCAA+CGG | + | chr2_4:39730176-39730195 | None:intergenic | 35.0% |
TTGACAGTTTACAACTCAAC+AGG | - | chr2_4:39730176-39730195 | Msa0327780:intron | 35.0% | |
TGACAGTTTACAACTCAACA+GGG | - | chr2_4:39730177-39730196 | Msa0327780:intron | 35.0% | |
!! | ATTCTGAAGCGTGTAGAAAA+AGG | - | chr2_4:39730572-39730591 | Msa0327780:intron | 35.0% |
ACTAAGGTAGCAGTTTATGT+TGG | - | chr2_4:39730651-39730670 | Msa0327780:intron | 35.0% | |
!! | TAGCAGTTTATGTTGGTTTG+AGG | - | chr2_4:39730658-39730677 | Msa0327780:intron | 35.0% |
TGAGGTTATGAGATGGTTAT+TGG | - | chr2_4:39730676-39730695 | Msa0327780:intron | 35.0% | |
!! | ATAAGGTTGGTGAAGCAATA+TGG | - | chr2_4:39730843-39730862 | Msa0327780:intron | 35.0% |
CAAATAGCTGAGAAGTTAGA+AGG | - | chr2_4:39730882-39730901 | Msa0327780:intron | 35.0% | |
! | TGACTGAGGATCAAATTTTC+AGG | - | chr2_4:39730987-39731006 | Msa0327780:intron | 35.0% |
AACTACACTTTGACTGTGTT+TGG | - | chr2_4:39731016-39731035 | Msa0327780:intron | 35.0% | |
!! | ACACTTCTAGGATTGTTTGA+AGG | + | chr2_4:39731236-39731255 | None:intergenic | 35.0% |
CAAACAATCCAATCCAAACA+TGG | - | chr2_4:39731275-39731294 | Msa0327780:intron | 35.0% | |
TTCATATCTGTTCCATGTGT+AGG | - | chr2_4:39731576-39731595 | Msa0327780:intron | 35.0% | |
! | ATTGTCAAAGTACCTACACA+TGG | + | chr2_4:39731591-39731610 | None:intergenic | 35.0% |
AATACTAGTCCTCTTTGCAA+TGG | - | chr2_4:39731652-39731671 | Msa0327780:intron | 35.0% | |
AATGGAAACTCCTGTTAGTT+TGG | - | chr2_4:39731670-39731689 | Msa0327780:intron | 35.0% | |
AGAAATGAAAAGGTCTCATG+TGG | - | chr2_4:39731707-39731726 | Msa0327780:intron | 35.0% | |
! | CTACTTATATTTAAGGTCGG+AGG | + | chr2_4:39731780-39731799 | None:intergenic | 35.0% |
!!! | AAAGTCCAGGTTTTAAACTC+TGG | + | chr2_4:39731880-39731899 | None:intergenic | 35.0% |
!! | TGATTTTGAGAAGAAAGTCC+AGG | + | chr2_4:39731893-39731912 | None:intergenic | 35.0% |
TCTTCTCAAAATCATTTGGG+TGG | - | chr2_4:39731899-39731918 | Msa0327780:intron | 35.0% | |
! | TCAATTGCTTAATGGATGTC+AGG | - | chr2_4:39732010-39732029 | Msa0327780:intron | 35.0% |
ACTACATCCTCGAGTTTAAT+CGG | + | chr2_4:39732059-39732078 | None:intergenic | 35.0% | |
! | AAACTCGAGGATGTAGTTTT+AGG | - | chr2_4:39732062-39732081 | Msa0327780:intron | 35.0% |
TGATGACAAAACTGTACCAA+AGG | - | chr2_4:39732133-39732152 | Msa0327780:intron | 35.0% | |
ATAGATAATGCAAGATGGGA+TGG | - | chr2_4:39732194-39732213 | Msa0327780:intron | 35.0% | |
TAGATAATGCAAGATGGGAT+GGG | - | chr2_4:39732195-39732214 | Msa0327780:intron | 35.0% | |
!!! | TACCTTTTTTGATGAAGGCT+GGG | - | chr2_4:39732219-39732238 | Msa0327780:intron | 35.0% |
TATTCCTTTCACTTACCTCT+TGG | + | chr2_4:39732258-39732277 | None:intergenic | 35.0% | |
TAGCAGATCGTGAAAATTTG+CGG | - | chr2_4:39732299-39732318 | Msa0327780:intron | 35.0% | |
!! | TTGTGACATTGGTTTGATGT+TGG | + | chr2_4:39732450-39732469 | None:intergenic | 35.0% |
GATCTCAGCTTAAAAGAGAT+GGG | + | chr2_4:39732737-39732756 | None:intergenic | 35.0% | |
TGATCTCAGCTTAAAAGAGA+TGG | + | chr2_4:39732738-39732757 | None:intergenic | 35.0% | |
! | TCTCTTTTAAGCTGAGATCA+AGG | - | chr2_4:39732738-39732757 | Msa0327780:intron | 35.0% |
! | CTCTTTTAAGCTGAGATCAA+GGG | - | chr2_4:39732739-39732758 | Msa0327780:intron | 35.0% |
ATGCCAGAATAAGTGTTTCT+TGG | - | chr2_4:39732781-39732800 | Msa0327780:intron | 35.0% | |
!! | GTTTTGGTCATGTGACTATT+TGG | - | chr2_4:39732995-39733014 | Msa0327780:intron | 35.0% |
!! | TCATGTGACTATTTGGTGTA+AGG | - | chr2_4:39733002-39733021 | Msa0327780:intron | 35.0% |
! | TTGGTGTAAGGTTTTTCACT+TGG | - | chr2_4:39733014-39733033 | Msa0327780:intron | 35.0% |
AATAGTAAGCTAACAGTGTG+AGG | + | chr2_4:39733157-39733176 | None:intergenic | 35.0% | |
CTTACTATTGCATGACAAAC+TGG | - | chr2_4:39733168-39733187 | Msa0327780:intron | 35.0% | |
GATGTACAACAAAACACTCA+TGG | + | chr2_4:39733283-39733302 | None:intergenic | 35.0% | |
!! | TGAGTGTTTTGTTGTACATC+AGG | - | chr2_4:39733283-39733302 | Msa0327780:intron | 35.0% |
GACTTAACAGTTCTCTTAGT+TGG | + | chr2_4:39733347-39733366 | None:intergenic | 35.0% | |
!!! | GACATTTGTTTTGTTCCGTT+TGG | - | chr2_4:39733446-39733465 | Msa0327780:intron | 35.0% |
!!! | TTGTTGATTTTGGTTGAAGC+AGG | - | chr2_4:39733569-39733588 | Msa0327780:intron | 35.0% |
!!! | TGTTGATTTTGGTTGAAGCA+GGG | - | chr2_4:39733570-39733589 | Msa0327780:intron | 35.0% |
TCTTAATAAGCAATCAGAGC+TGG | - | chr2_4:39733633-39733652 | Msa0327780:intron | 35.0% | |
!! | TCGATGAAAGTATCCATATC+AGG | + | chr2_4:39733791-39733810 | None:intergenic | 35.0% |
AAAAGGACCAAAGACATATC+AGG | - | chr2_4:39733841-39733860 | Msa0327780:intron | 35.0% | |
TCAAACAAACCTCTATAGAG+TGG | + | chr2_4:39733887-39733906 | None:intergenic | 35.0% | |
! | GGTAAGGCATTATAGATTCT+TGG | + | chr2_4:39733947-39733966 | None:intergenic | 35.0% |
TAATACCTGCATGTGTCAAA+AGG | + | chr2_4:39734033-39734052 | None:intergenic | 35.0% | |
!!! | GATAAGGTACACCCTTTTTT+CGG | + | chr2_4:39734173-39734192 | None:intergenic | 35.0% |
GGGAACTTTGGTATAAGATA+AGG | + | chr2_4:39734189-39734208 | None:intergenic | 35.0% | |
! | TCTTAAAGTATTCCGGGAAA+GGG | + | chr2_4:39734209-39734228 | None:intergenic | 35.0% |
! | TTCTTAAAGTATTCCGGGAA+AGG | + | chr2_4:39734210-39734229 | None:intergenic | 35.0% |
! | GCACATTCTTAAAGTATTCC+GGG | + | chr2_4:39734215-39734234 | None:intergenic | 35.0% |
AAATTAATGTTGTGCCTGTC+AGG | - | chr2_4:39735004-39735023 | Msa0327780:CDS | 35.0% | |
AATTAATGTTGTGCCTGTCA+GGG | - | chr2_4:39735005-39735024 | Msa0327780:CDS | 35.0% | |
TTGAAGATCAATGCACTTGA+AGG | - | chr2_4:39735091-39735110 | Msa0327780:CDS | 35.0% | |
TCTATAGCTGCAAATTGAAG+TGG | + | chr2_4:39735184-39735203 | None:intergenic | 35.0% | |
AGGCAACTTATAATTGCCTA+AGG | + | chr2_4:39735233-39735252 | None:intergenic | 35.0% | |
GGATTTAAATGACCTGTTCC+CGG | + | chr2_4:39726233-39726252 | None:intergenic | 40.0% | |
AAATTGTTCCGGGAACAATG+TGG | + | chr2_4:39726306-39726325 | None:intergenic | 40.0% | |
! | CCGGAACAATTTTACCATTC+TGG | - | chr2_4:39726314-39726333 | Msa0327780:three_prime_UTR | 40.0% |
TGATAAACGTCTCAAGGACT+TGG | + | chr2_4:39726418-39726437 | None:intergenic | 40.0% | |
CGGTTGAGGGATAAAATGAA+AGG | + | chr2_4:39726452-39726471 | None:intergenic | 40.0% | |
ATAGACAACAGTACGGTTGA+GGG | + | chr2_4:39726465-39726484 | None:intergenic | 40.0% | |
AATAGACAACAGTACGGTTG+AGG | + | chr2_4:39726466-39726485 | None:intergenic | 40.0% | |
TCAACCGTACTGTTGTCTAT+TGG | - | chr2_4:39726465-39726484 | Msa0327780:CDS | 40.0% | |
CAACCGTACTGTTGTCTATT+GGG | - | chr2_4:39726466-39726485 | Msa0327780:CDS | 40.0% | |
CTTCCCAATAGACAACAGTA+CGG | + | chr2_4:39726472-39726491 | None:intergenic | 40.0% | |
TCTTTAGTGAGAATCGTCGA+TGG | + | chr2_4:39726524-39726543 | None:intergenic | 40.0% | |
!! | CGTTTTTGTCACTTCCTGTT+TGG | + | chr2_4:39726697-39726716 | None:intergenic | 40.0% |
ACAGGAAGTGACAAAAACGA+TGG | - | chr2_4:39726698-39726717 | Msa0327780:intron | 40.0% | |
!!! | GGTGTGGACCTTTTAAAACA+TGG | - | chr2_4:39726729-39726748 | Msa0327780:intron | 40.0% |
!!! | GAAGCGAAATTGGTTTTAGG+TGG | - | chr2_4:39726797-39726816 | Msa0327780:CDS | 40.0% |
!!! | AGCGAAATTGGTTTTAGGTG+GGG | - | chr2_4:39726799-39726818 | Msa0327780:CDS | 40.0% |
! | ACTAGCCGATGAAACTGTTT+TGG | - | chr2_4:39726841-39726860 | Msa0327780:CDS | 40.0% |
TCAGGCAATAGGGATGAAAA+GGG | - | chr2_4:39726911-39726930 | Msa0327780:intron | 40.0% | |
GAATGAATGGAGAAGCAGAA+TGG | - | chr2_4:39726967-39726986 | Msa0327780:intron | 40.0% | |
! | AGAATGGTGAACAGAGGTAT+AGG | - | chr2_4:39726983-39727002 | Msa0327780:intron | 40.0% |
ACACACCAAAGTGGTTGAAT+AGG | + | chr2_4:39727016-39727035 | None:intergenic | 40.0% | |
! | TTCAACCACTTTGGTGTGTT+AGG | - | chr2_4:39727017-39727036 | Msa0327780:CDS | 40.0% |
GGAAATGCAGTGCAAATATC+AGG | + | chr2_4:39727137-39727156 | None:intergenic | 40.0% | |
! | CTCTTTTTCCATTTGAGAGG+AGG | + | chr2_4:39727216-39727235 | None:intergenic | 40.0% |
! | ATTAGTGTTACTCTCCCTCA+CGG | + | chr2_4:39727637-39727656 | None:intergenic | 40.0% |
TGCCCCTAATAAGGGTAAAA+TGG | + | chr2_4:39728132-39728151 | None:intergenic | 40.0% | |
!!! | TACCCTTATTAGGGGCATTT+TGG | - | chr2_4:39728135-39728154 | Msa0327780:intron | 40.0% |
AGATGAGAGAGAAAATGAGG+GGG | + | chr2_4:39728223-39728242 | None:intergenic | 40.0% | |
GAGATGAGAGAGAAAATGAG+GGG | + | chr2_4:39728224-39728243 | None:intergenic | 40.0% | |
GAGAGATGAGAGAGAAAATG+AGG | + | chr2_4:39728226-39728245 | None:intergenic | 40.0% | |
!!! | ATTTTGGGGTTGAGAATGAG+AGG | + | chr2_4:39728310-39728329 | None:intergenic | 40.0% |
! | GGGTGAGGATTGTAGAATTT+TGG | + | chr2_4:39728326-39728345 | None:intergenic | 40.0% |
AAGATTGAAGGATGGGGTTA+GGG | + | chr2_4:39728458-39728477 | None:intergenic | 40.0% | |
AAAGATTGAAGGATGGGGTT+AGG | + | chr2_4:39728459-39728478 | None:intergenic | 40.0% | |
AAAGTGATAGGAGAAGTTGC+TGG | - | chr2_4:39728597-39728616 | Msa0327780:intron | 40.0% | |
!!! | GTTTTGTTTTGGATTGTGGC+TGG | - | chr2_4:39728711-39728730 | Msa0327780:intron | 40.0% |
CATGCATGCATAATTCTCTC+TGG | - | chr2_4:39728918-39728937 | Msa0327780:intron | 40.0% | |
AGGGAGAAGAGTAGAAGAAA+TGG | - | chr2_4:39729058-39729077 | Msa0327780:intron | 40.0% | |
CAAGACTGAGTAATTGGAGA+TGG | - | chr2_4:39729131-39729150 | Msa0327780:intron | 40.0% | |
AGTAATTGGAGATGGAAGCT+AGG | - | chr2_4:39729139-39729158 | Msa0327780:intron | 40.0% | |
AGATGGAAGCTAGGAACTTA+AGG | - | chr2_4:39729148-39729167 | Msa0327780:intron | 40.0% | |
AGATTATGCATGAGGGATGA+GGG | + | chr2_4:39729234-39729253 | None:intergenic | 40.0% | |
TAGATTATGCATGAGGGATG+AGG | + | chr2_4:39729235-39729254 | None:intergenic | 40.0% | |
TCACACGAAGACAATGCATT+TGG | + | chr2_4:39729772-39729791 | None:intergenic | 40.0% | |
CATTGTCTTCGTGTGAGTAT+TGG | - | chr2_4:39729776-39729795 | Msa0327780:intron | 40.0% | |
TGAGTTGTAAACTGTCAACG+GGG | + | chr2_4:39730174-39730193 | None:intergenic | 40.0% | |
CATGGATCCGGATATTATCT+TGG | - | chr2_4:39730372-39730391 | Msa0327780:intron | 40.0% | |
TTGAAGAATGAGCAGCATGA+AGG | + | chr2_4:39730456-39730475 | None:intergenic | 40.0% | |
GTGACAGGGAACATATCATT+AGG | + | chr2_4:39730484-39730503 | None:intergenic | 40.0% | |
TGAAGCGTGTAGAAAAAGGT+TGG | - | chr2_4:39730576-39730595 | Msa0327780:intron | 40.0% | |
GAAGCGTGTAGAAAAAGGTT+GGG | - | chr2_4:39730577-39730596 | Msa0327780:intron | 40.0% | |
AAGCGTGTAGAAAAAGGTTG+GGG | - | chr2_4:39730578-39730597 | Msa0327780:intron | 40.0% | |
!! | GTTGGTTTGAGGTTATGAGA+TGG | - | chr2_4:39730669-39730688 | Msa0327780:intron | 40.0% |
TAGCTGAGAAGTTAGAAGGA+AGG | - | chr2_4:39730886-39730905 | Msa0327780:intron | 40.0% | |
AGCTGAGAAGTTAGAAGGAA+GGG | - | chr2_4:39730887-39730906 | Msa0327780:intron | 40.0% | |
TGATCTTGTTAAAGCAGCTG+AGG | + | chr2_4:39730954-39730973 | None:intergenic | 40.0% | |
CTATCTTGGAAAAGAGCTTG+TGG | - | chr2_4:39731371-39731390 | Msa0327780:intron | 40.0% | |
!! | TCAGCAGATTTTGGTACTGA+AGG | - | chr2_4:39731480-39731499 | Msa0327780:intron | 40.0% |
! | TCCTGTTAGTTTGGATGTAG+AGG | - | chr2_4:39731679-39731698 | Msa0327780:intron | 40.0% |
TCCTCTACATCCAAACTAAC+AGG | + | chr2_4:39731683-39731702 | None:intergenic | 40.0% | |
CTTCTAGCATATACATCCTC+CGG | + | chr2_4:39731857-39731876 | None:intergenic | 40.0% | |
! | AGAAGCCAGAGTTTAAAACC+TGG | - | chr2_4:39731872-39731891 | Msa0327780:intron | 40.0% |
TATGAGACCGATTAAACTCG+AGG | - | chr2_4:39732049-39732068 | Msa0327780:intron | 40.0% | |
CTCTGGTGTGGTTCTTATAT+TGG | + | chr2_4:39732088-39732107 | None:intergenic | 40.0% | |
CAATATAAGAACCACACCAG+AGG | - | chr2_4:39732086-39732105 | Msa0327780:intron | 40.0% | |
! | GTTTTGTCATCAATGTAGGC+TGG | + | chr2_4:39732125-39732144 | None:intergenic | 40.0% |
AGATAATGCAAGATGGGATG+GGG | - | chr2_4:39732196-39732215 | Msa0327780:intron | 40.0% | |
!!! | TGGGGTACCTTTTTTGATGA+AGG | - | chr2_4:39732214-39732233 | Msa0327780:intron | 40.0% |
!!! | GTACCTTTTTTGATGAAGGC+TGG | - | chr2_4:39732218-39732237 | Msa0327780:intron | 40.0% |
TTCCCAGCCTTCATCAAAAA+AGG | + | chr2_4:39732224-39732243 | None:intergenic | 40.0% | |
AAAATAGGGGCTAATGACCA+TGG | + | chr2_4:39732966-39732985 | None:intergenic | 40.0% | |
ACTATTGCATGACAAACTGG+TGG | - | chr2_4:39733171-39733190 | Msa0327780:intron | 40.0% | |
! | TTTGTTGTACATCAGGTGAC+TGG | - | chr2_4:39733290-39733309 | Msa0327780:intron | 40.0% |
ATCAGGTGACTGGTATATAC+AGG | - | chr2_4:39733300-39733319 | Msa0327780:intron | 40.0% | |
TCAGGTGACTGGTATATACA+GGG | - | chr2_4:39733301-39733320 | Msa0327780:intron | 40.0% | |
ATACAGGGCTATGAATGTCA+AGG | - | chr2_4:39733316-39733335 | Msa0327780:intron | 40.0% | |
!!! | GTTGATTTTGGTTGAAGCAG+GGG | - | chr2_4:39733571-39733590 | Msa0327780:intron | 40.0% |
!!! | TTGATTTTGGTTGAAGCAGG+GGG | - | chr2_4:39733572-39733591 | Msa0327780:intron | 40.0% |
! | TTTTACGCTCCACTCTATAG+AGG | - | chr2_4:39733875-39733894 | Msa0327780:intron | 40.0% |
AACCTTTCTTCCCCTTATAG+AGG | + | chr2_4:39733986-39734005 | None:intergenic | 40.0% | |
! | ACAATCCTTTTGACACATGC+AGG | - | chr2_4:39734025-39734044 | Msa0327780:intron | 40.0% |
TATACCAAAGTTCCCTTTCC+CGG | - | chr2_4:39734194-39734213 | Msa0327780:intron | 40.0% | |
ATTGGTTGAGATCTGACAGA+AGG | - | chr2_4:39734450-39734469 | Msa0327780:intron | 40.0% | |
TTGGTTGAGATCTGACAGAA+GGG | - | chr2_4:39734451-39734470 | Msa0327780:intron | 40.0% | |
! | AGCATTATGCAGGTTGACTT+TGG | - | chr2_4:39734500-39734519 | Msa0327780:CDS | 40.0% |
TTGCAGAAATATGCAGCACA+GGG | - | chr2_4:39734624-39734643 | Msa0327780:CDS | 40.0% | |
! | GACTCTGCCATATCTAAAGT+AGG | - | chr2_4:39734719-39734738 | Msa0327780:CDS | 40.0% |
TCAAAGTTCTCAAGTGGCAA+CGG | - | chr2_4:39734887-39734906 | Msa0327780:CDS | 40.0% | |
TCGGTGTGCAAAACAAAGTT+GGG | + | chr2_4:39735048-39735067 | None:intergenic | 40.0% | |
TTGTTGCTAATCTTCCACCT+CGG | + | chr2_4:39735067-39735086 | None:intergenic | 40.0% | |
TGGTAGGTCTTGGGGTTTAA+GGG | + | chr2_4:39726254-39726273 | None:intergenic | 45.0% | |
TTGGTAGGTCTTGGGGTTTA+AGG | + | chr2_4:39726255-39726274 | None:intergenic | 45.0% | |
GTATGACATTCTGCAGGACT+TGG | + | chr2_4:39726274-39726293 | None:intergenic | 45.0% | |
CGATGTAACCACATTGTTCC+CGG | - | chr2_4:39726295-39726314 | Msa0327780:three_prime_UTR | 45.0% | |
TGAGAATCGTCGATGGAACA+TGG | + | chr2_4:39726517-39726536 | None:intergenic | 45.0% | |
! | GAAGTCTGATGATGACACGA+TGG | + | chr2_4:39726618-39726637 | None:intergenic | 45.0% |
GGAAGTGACAAAAACGATGG+CGG | - | chr2_4:39726701-39726720 | Msa0327780:intron | 45.0% | |
GACCGAAGAAGAAGCGAAAT+TGG | - | chr2_4:39726787-39726806 | Msa0327780:intron | 45.0% | |
!!! | GAAATTGGTTTTAGGTGGGG+AGG | - | chr2_4:39726802-39726821 | Msa0327780:CDS | 45.0% |
!! | CTGTTTTGGATTCGCGACTT+TGG | - | chr2_4:39726855-39726874 | Msa0327780:CDS | 45.0% |
TTGGCCTAGAACTTCTGCAA+TGG | - | chr2_4:39726874-39726893 | Msa0327780:CDS | 45.0% | |
TCAGCCATTGCAGAAGTTCT+AGG | + | chr2_4:39726881-39726900 | None:intergenic | 45.0% | |
GTCAGGCAATAGGGATGAAA+AGG | - | chr2_4:39726910-39726929 | Msa0327780:intron | 45.0% | |
AGAAGCAGAATGGTGAACAG+AGG | - | chr2_4:39726977-39726996 | Msa0327780:intron | 45.0% | |
CTGAGCCTATTCAACCACTT+TGG | - | chr2_4:39727008-39727027 | Msa0327780:CDS | 45.0% | |
GTACTGTGTTGCACATACCA+GGG | + | chr2_4:39727045-39727064 | None:intergenic | 45.0% | |
TGTACTGTGTTGCACATACC+AGG | + | chr2_4:39727046-39727065 | None:intergenic | 45.0% | |
ACCAAACTCCTCCTCTCAAA+TGG | - | chr2_4:39727205-39727224 | Msa0327780:intron | 45.0% | |
TCCATTTGAGAGGAGGAGTT+TGG | + | chr2_4:39727209-39727228 | None:intergenic | 45.0% | |
TCAGTAGGCTCACACAAAGT+TGG | + | chr2_4:39727287-39727306 | None:intergenic | 45.0% | |
ATTGAAGAGGTAACCCGTGA+GGG | - | chr2_4:39727620-39727639 | Msa0327780:intron | 45.0% | |
! | TTAGTGTTACTCTCCCTCAC+GGG | + | chr2_4:39727636-39727655 | None:intergenic | 45.0% |
TCATGCACTAAGTTCAGGCT+TGG | - | chr2_4:39727656-39727675 | Msa0327780:intron | 45.0% | |
CATGCACTAAGTTCAGGCTT+GGG | - | chr2_4:39727657-39727676 | Msa0327780:intron | 45.0% | |
TGATGTGACGCTTCAACGAT+AGG | + | chr2_4:39727998-39728017 | None:intergenic | 45.0% | |
! | ATTTTCATGGGGTTTGGGTG+AGG | + | chr2_4:39728341-39728360 | None:intergenic | 45.0% |
CAGAACTGGAAGAGGAGAAA+AGG | + | chr2_4:39728424-39728443 | None:intergenic | 45.0% | |
AGTTTGGACAGAACTGGAAG+AGG | + | chr2_4:39728432-39728451 | None:intergenic | 45.0% | |
TGATAGGAGAAGTTGCTGGT+GGG | - | chr2_4:39728601-39728620 | Msa0327780:intron | 45.0% | |
AAAAAGGGGAGAAACGGGAA+CGG | - | chr2_4:39728791-39728810 | Msa0327780:intron | 45.0% | |
TCTCTCTTACTCTTCCTCAC+CGG | + | chr2_4:39728875-39728894 | None:intergenic | 45.0% | |
GAGGAAGAGTAAGAGAGAGA+CGG | - | chr2_4:39728877-39728896 | Msa0327780:intron | 45.0% | |
GCAGAAAATAGCTTCAGTGC+AGG | - | chr2_4:39729527-39729546 | Msa0327780:intron | 45.0% | |
! | AAAGAAGCTTGCAGTTCTGG+AGG | + | chr2_4:39729942-39729961 | None:intergenic | 45.0% |
!!! | CGGGGTGGATTGCTTTTTTT+CGG | + | chr2_4:39730156-39730175 | None:intergenic | 45.0% |
TGCAATGAGTTCTGCGTCTA+TGG | - | chr2_4:39730405-39730424 | Msa0327780:intron | 45.0% | |
GAATGAGCAGCATGAAGGAA+TGG | + | chr2_4:39730451-39730470 | None:intergenic | 45.0% | |
! | CTGTTACTTGACAGGGATGT+TGG | - | chr2_4:39730530-39730549 | Msa0327780:CDS | 45.0% |
GTAGAAAAAGGTTGGGGTCA+AGG | - | chr2_4:39730584-39730603 | Msa0327780:intron | 45.0% | |
GAGAAGTTAGAAGGAAGGGT+TGG | - | chr2_4:39730891-39730910 | Msa0327780:intron | 45.0% | |
ATTCAAGCGGTATCTGACTG+AGG | - | chr2_4:39730973-39730992 | Msa0327780:intron | 45.0% | |
GGATTGTTTGAAGGAGCTCA+AGG | + | chr2_4:39731227-39731246 | None:intergenic | 45.0% | |
CCACTGCCATAAACACTTCT+AGG | + | chr2_4:39731248-39731267 | None:intergenic | 45.0% | |
!! | CCTAGAAGTGTTTATGGCAG+TGG | - | chr2_4:39731245-39731264 | Msa0327780:intron | 45.0% |
! | TTTTTGACCCTTTGTGGTCG+AGG | - | chr2_4:39731427-39731446 | Msa0327780:intron | 45.0% |
TGTATTGCCTCGACCACAAA+GGG | + | chr2_4:39731437-39731456 | None:intergenic | 45.0% | |
ATGTATTGCCTCGACCACAA+AGG | + | chr2_4:39731438-39731457 | None:intergenic | 45.0% | |
!! | GATTTTGGTACTGAAGGACG+TGG | - | chr2_4:39731486-39731505 | Msa0327780:intron | 45.0% |
CAGGAGTTTCCATTGCAAAG+AGG | + | chr2_4:39731664-39731683 | None:intergenic | 45.0% | |
TTGGTCAAATATAAGGCCGG+AGG | - | chr2_4:39731838-39731857 | Msa0327780:intron | 45.0% | |
! | GCTTAATGGATGTCAGGTCA+AGG | - | chr2_4:39732016-39732035 | Msa0327780:intron | 45.0% |
TATAAGAACCACACCAGAGG+AGG | - | chr2_4:39732089-39732108 | Msa0327780:intron | 45.0% | |
!! | GGAAAGCATTACACACCAAG+AGG | - | chr2_4:39732240-39732259 | Msa0327780:intron | 45.0% |
CACACCAAGAGGTAAGTGAA+AGG | - | chr2_4:39732251-39732270 | Msa0327780:intron | 45.0% | |
! | GATAAGTTGGATGATGGCCA+TGG | - | chr2_4:39732946-39732965 | Msa0327780:CDS | 45.0% |
! | CATGACAAACTGGTGGATAC+TGG | - | chr2_4:39733178-39733197 | Msa0327780:intron | 45.0% |
AGGGCTATGAATGTCAAGGT+GGG | - | chr2_4:39733320-39733339 | Msa0327780:intron | 45.0% | |
TCCGTTTGGCCCTTAAAAGT+TGG | - | chr2_4:39733460-39733479 | Msa0327780:intron | 45.0% | |
!! | GCCAACTTTTAAGGGCCAAA+CGG | + | chr2_4:39733464-39733483 | None:intergenic | 45.0% |
!!! | GAGCATGGGGTTGTTGATTT+TGG | - | chr2_4:39733559-39733578 | Msa0327780:intron | 45.0% |
AGTCTGGCTGATACCTGATA+TGG | - | chr2_4:39733775-39733794 | Msa0327780:intron | 45.0% | |
CATCGCACCTGATATGTCTT+TGG | + | chr2_4:39733851-39733870 | None:intergenic | 45.0% | |
CTTATAGAGGTGGCTAGGAA+GGG | + | chr2_4:39733973-39733992 | None:intergenic | 45.0% | |
CTTCCTAGCCACCTCTATAA+GGG | - | chr2_4:39733972-39733991 | Msa0327780:intron | 45.0% | |
TTCCTAGCCACCTCTATAAG+GGG | - | chr2_4:39733973-39733992 | Msa0327780:intron | 45.0% | |
CTTTCTTCCCCTTATAGAGG+TGG | + | chr2_4:39733983-39734002 | None:intergenic | 45.0% | |
CACCTCTATAAGGGGAAGAA+AGG | - | chr2_4:39733981-39734000 | Msa0327780:intron | 45.0% | |
TATTCCGGGAAAGGGAACTT+TGG | + | chr2_4:39734201-39734220 | None:intergenic | 45.0% | |
TGCAAATGGTTGCTGCAGAT+TGG | - | chr2_4:39734432-39734451 | Msa0327780:intron | 45.0% | |
GACAGAAGGGAAGATGATCT+TGG | - | chr2_4:39734464-39734483 | Msa0327780:intron | 45.0% | |
AGAAGGGAAGATGATCTTGG+TGG | - | chr2_4:39734467-39734486 | Msa0327780:intron | 45.0% | |
!!! | GCAGGTTGACTTTGGTGTTT+TGG | - | chr2_4:39734508-39734527 | Msa0327780:CDS | 45.0% |
CTTGCAGAAATATGCAGCAC+AGG | - | chr2_4:39734623-39734642 | Msa0327780:CDS | 45.0% | |
AGAAATATGCAGCACAGGGT+GGG | - | chr2_4:39734628-39734647 | Msa0327780:CDS | 45.0% | |
GCCTGTCAGGGATATAACTA+TGG | - | chr2_4:39735017-39735036 | Msa0327780:CDS | 45.0% | |
GCCATAGTTATATCCCTGAC+AGG | + | chr2_4:39735021-39735040 | None:intergenic | 45.0% | |
! | CTCGGTGTGCAAAACAAAGT+TGG | + | chr2_4:39735049-39735068 | None:intergenic | 45.0% |
!!! | CAACTTTGTTTTGCACACCG+AGG | - | chr2_4:39735047-39735066 | Msa0327780:CDS | 45.0% |
AGATCGTCTTGCAACAGAGC+CGG | - | chr2_4:39726211-39726230 | Msa0327780:three_prime_UTR | 50.0% | |
! | TGCAGGACTTGGTAGGTCTT+GGG | + | chr2_4:39726263-39726282 | None:intergenic | 50.0% |
! | GACATTCTGCAGGACTTGGT+AGG | + | chr2_4:39726270-39726289 | None:intergenic | 50.0% |
CATCGCGTATGACATTCTGC+AGG | + | chr2_4:39726280-39726299 | None:intergenic | 50.0% | |
! | ACAAAAACGATGGCGGCTCT+TGG | - | chr2_4:39726708-39726727 | Msa0327780:intron | 50.0% |
AGTCCTTGTGGTCAGGCAAT+AGG | - | chr2_4:39726900-39726919 | Msa0327780:intron | 50.0% | |
GTCCTTGTGGTCAGGCAATA+GGG | - | chr2_4:39726901-39726920 | Msa0327780:intron | 50.0% | |
ATCCCTATTGCCTGACCACA+AGG | + | chr2_4:39726906-39726925 | None:intergenic | 50.0% | |
! | GGGTTTGAAGCGATACACAG+AGG | - | chr2_4:39726931-39726950 | Msa0327780:intron | 50.0% |
GGGTTCCTAACACACCAAAG+TGG | + | chr2_4:39727025-39727044 | None:intergenic | 50.0% | |
! | CTTTGGTGTGTTAGGAACCC+TGG | - | chr2_4:39727025-39727044 | Msa0327780:CDS | 50.0% |
ACGATCCGAGAAATGTGTGG+TGG | + | chr2_4:39727110-39727129 | None:intergenic | 50.0% | |
CACACGATCCGAGAAATGTG+TGG | + | chr2_4:39727113-39727132 | None:intergenic | 50.0% | |
TATGCTGCCCTAGCAGCATT+TGG | + | chr2_4:39727472-39727491 | None:intergenic | 50.0% | |
GATTGAAGAGGTAACCCGTG+AGG | - | chr2_4:39727619-39727638 | Msa0327780:intron | 50.0% | |
TTCCTCCCTCTCTTCTCTCA+CGG | - | chr2_4:39728251-39728270 | Msa0327780:intron | 50.0% | |
GGAAACCGTGAGAGAAGAGA+GGG | + | chr2_4:39728259-39728278 | None:intergenic | 50.0% | |
TGGAAACCGTGAGAGAAGAG+AGG | + | chr2_4:39728260-39728279 | None:intergenic | 50.0% | |
AGAGAGAGATGGGAGGAAGA+AGG | + | chr2_4:39728283-39728302 | None:intergenic | 50.0% | |
TCTTCCTCCCATCTCTCTCT+CGG | - | chr2_4:39728283-39728302 | Msa0327780:intron | 50.0% | |
GGGTTCAGTTTGGACAGAAC+TGG | + | chr2_4:39728438-39728457 | None:intergenic | 50.0% | |
GATGGGGTTAGGGTTCAGTT+TGG | + | chr2_4:39728448-39728467 | None:intergenic | 50.0% | |
GTGATAGGAGAAGTTGCTGG+TGG | - | chr2_4:39728600-39728619 | Msa0327780:intron | 50.0% | |
AAAAGGGGAGAAACGGGAAC+GGG | - | chr2_4:39728792-39728811 | Msa0327780:intron | 50.0% | |
AAGAAGAACGGGAACGGGAA+AGG | - | chr2_4:39728818-39728837 | Msa0327780:intron | 50.0% | |
AGAAGAACGGGAACGGGAAA+GGG | - | chr2_4:39728819-39728838 | Msa0327780:intron | 50.0% | |
! | GTTTTTCGCCGCAGTTGTGA+CGG | + | chr2_4:39728845-39728864 | None:intergenic | 50.0% |
ACAACTGCGGCGAAAAACAG+CGG | - | chr2_4:39728847-39728866 | Msa0327780:intron | 50.0% | |
GTTTGGGTAAGAGGGATCTG+AGG | - | chr2_4:39729020-39729039 | Msa0327780:intron | 50.0% | |
TGCATGAGGGATGAGGGAAA+GGG | + | chr2_4:39729228-39729247 | None:intergenic | 50.0% | |
ATGCATGAGGGATGAGGGAA+AGG | + | chr2_4:39729229-39729248 | None:intergenic | 50.0% | |
!! | GGTTTTATGGACTGCTGTGC+TGG | - | chr2_4:39729675-39729694 | Msa0327780:intron | 50.0% |
! | ATGGACTGCTGTGCTGGAAT+TGG | - | chr2_4:39729681-39729700 | Msa0327780:intron | 50.0% |
GTTGTAAACTGTCAACGGGG+TGG | + | chr2_4:39730171-39730190 | None:intergenic | 50.0% | |
TACGCCTCAGCTCATGGTTA+TGG | - | chr2_4:39731942-39731961 | Msa0327780:intron | 50.0% | |
AGGTCCATAACCATGAGCTG+AGG | + | chr2_4:39731949-39731968 | None:intergenic | 50.0% | |
TGGATATGCAACACCTCCTC+TGG | + | chr2_4:39732105-39732124 | None:intergenic | 50.0% | |
GTCTGGGTTAAGCTGTCCTT+TGG | + | chr2_4:39732152-39732171 | None:intergenic | 50.0% | |
CTTAACCCAGACATTTGCCG+CGG | - | chr2_4:39732160-39732179 | Msa0327780:intron | 50.0% | |
ACACCTGACGAGATACCTGA+GGG | - | chr2_4:39733124-39733143 | Msa0327780:intron | 50.0% | |
AAAGCCAGGTGACAGAGTTG+AGG | - | chr2_4:39733201-39733220 | Msa0327780:intron | 50.0% | |
CAGGGCTATGAATGTCAAGG+TGG | - | chr2_4:39733319-39733338 | Msa0327780:intron | 50.0% | |
GGGGATCAGTCAACAGAAAG+AGG | - | chr2_4:39733591-39733610 | Msa0327780:intron | 50.0% | |
TGGCTAGGAAGGGATAGGTA+AGG | + | chr2_4:39733963-39733982 | None:intergenic | 50.0% | |
CCTTATAGAGGTGGCTAGGA+AGG | + | chr2_4:39733974-39733993 | None:intergenic | 50.0% | |
CCTTCCTAGCCACCTCTATA+AGG | - | chr2_4:39733971-39733990 | Msa0327780:intron | 50.0% | |
TTCCCCTTATAGAGGTGGCT+AGG | + | chr2_4:39733978-39733997 | None:intergenic | 50.0% | |
TCAACCTGCATAATGCTCCC+AGG | + | chr2_4:39734497-39734516 | None:intergenic | 50.0% | |
CAGAAATATGCAGCACAGGG+TGG | - | chr2_4:39734627-39734646 | Msa0327780:CDS | 50.0% | |
!!! | CTTTGTTTTGCACACCGAGG+TGG | - | chr2_4:39735050-39735069 | Msa0327780:CDS | 50.0% |
ACGATCTGGCCAATCGCTTC+CGG | + | chr2_4:39726198-39726217 | None:intergenic | 55.0% | |
GGCTCTGTTGCAAGACGATC+TGG | + | chr2_4:39726212-39726231 | None:intergenic | 55.0% | |
GATCGTCTTGCAACAGAGCC+GGG | - | chr2_4:39726212-39726231 | Msa0327780:three_prime_UTR | 55.0% | |
! | GCAGGACTTGGTAGGTCTTG+GGG | + | chr2_4:39726262-39726281 | None:intergenic | 55.0% |
! | CTGCAGGACTTGGTAGGTCT+TGG | + | chr2_4:39726264-39726283 | None:intergenic | 55.0% |
CGACGTCATCAGCACCAGAA+TGG | + | chr2_4:39726331-39726350 | None:intergenic | 55.0% | |
ATGACGTCGTACCAGGTTGC+TGG | - | chr2_4:39726342-39726361 | Msa0327780:three_prime_UTR | 55.0% | |
!! | GGATCGGTTTTCCAGCAACC+TGG | + | chr2_4:39726356-39726375 | None:intergenic | 55.0% |
! | CTGATGATGACACGATGGCG+CGG | + | chr2_4:39726613-39726632 | None:intergenic | 55.0% |
TGTGGACACGGCGACTTTAC+TGG | - | chr2_4:39726650-39726669 | Msa0327780:intron | 55.0% | |
CTGCAATGGCTGAGTCCTTG+TGG | - | chr2_4:39726888-39726907 | Msa0327780:intron | 55.0% | |
ATGGCTGAGTCCTTGTGGTC+AGG | - | chr2_4:39726893-39726912 | Msa0327780:intron | 55.0% | |
CGCTGCCACCACACATTTCT+CGG | - | chr2_4:39727102-39727121 | Msa0327780:CDS | 55.0% | |
AACCGTGAGAGAAGAGAGGG+AGG | + | chr2_4:39728256-39728275 | None:intergenic | 55.0% | |
GAGAGATGGGAGGAAGAAGG+TGG | + | chr2_4:39728280-39728299 | None:intergenic | 55.0% | |
GAGAGGACCGAGAGAGAGAT+GGG | + | chr2_4:39728293-39728312 | None:intergenic | 55.0% | |
TGAGAGGACCGAGAGAGAGA+TGG | + | chr2_4:39728294-39728313 | None:intergenic | 55.0% | |
GGGAACGGGAGGAAGAAGAA+CGG | - | chr2_4:39728806-39728825 | Msa0327780:intron | 55.0% | |
GGAACGGGAGGAAGAAGAAC+GGG | - | chr2_4:39728807-39728826 | Msa0327780:intron | 55.0% | |
GGGAGGAAGAAGAACGGGAA+CGG | - | chr2_4:39728812-39728831 | Msa0327780:intron | 55.0% | |
GGAGGAAGAAGAACGGGAAC+GGG | - | chr2_4:39728813-39728832 | Msa0327780:intron | 55.0% | |
!! | ATGGTGATGGCAGCAAGCTC+TGG | + | chr2_4:39729185-39729204 | None:intergenic | 55.0% |
GCAAGCAGTGTAGAGAGCGA+TGG | - | chr2_4:39730913-39730932 | Msa0327780:intron | 55.0% | |
! | TTGGTACTGAAGGACGTGGC+AGG | - | chr2_4:39731490-39731509 | Msa0327780:intron | 55.0% |
TTGAGCTACGCCTCAGCTCA+TGG | - | chr2_4:39731936-39731955 | Msa0327780:intron | 55.0% | |
ATGCAACACCTCCTCTGGTG+TGG | + | chr2_4:39732100-39732119 | None:intergenic | 55.0% | |
ATCTATGAAGTGGGCAGCCG+CGG | + | chr2_4:39732180-39732199 | None:intergenic | 55.0% | |
GACACCTGACGAGATACCTG+AGG | - | chr2_4:39733123-39733142 | Msa0327780:intron | 55.0% | |
! | CTGGTGGATACTGGAAAGCC+AGG | - | chr2_4:39733187-39733206 | Msa0327780:intron | 55.0% |
CTCACCTCAACTCTGTCACC+TGG | + | chr2_4:39733208-39733227 | None:intergenic | 55.0% | |
AGAGGTGGCTAGGAAGGGAT+AGG | + | chr2_4:39733968-39733987 | None:intergenic | 55.0% | |
CTGGCTCCGTGAGTACAAAG+AGG | + | chr2_4:39734057-39734076 | None:intergenic | 55.0% | |
GAGCCAGTCGTCTAGGTCAA+GGG | - | chr2_4:39734070-39734089 | Msa0327780:intron | 55.0% | |
AGCCAGTCGTCTAGGTCAAG+GGG | - | chr2_4:39734071-39734090 | Msa0327780:intron | 55.0% | |
! | ATGATCTTGGTGGCCGTCCT+GGG | - | chr2_4:39734477-39734496 | Msa0327780:intron | 55.0% |
CCTGCATAATGCTCCCAGGA+CGG | + | chr2_4:39734493-39734512 | None:intergenic | 55.0% | |
CTTGCAACAGAGCCGGGAAC+AGG | - | chr2_4:39726218-39726237 | Msa0327780:three_prime_UTR | 60.0% | |
!! | GGTGCTGATGACGTCGTACC+AGG | - | chr2_4:39726335-39726354 | Msa0327780:three_prime_UTR | 60.0% |
! | AACGATGGCGGCTCTTGGTG+TGG | - | chr2_4:39726713-39726732 | Msa0327780:intron | 60.0% |
TAGGTGGGGAGGTAGCGTTG+TGG | - | chr2_4:39726813-39726832 | Msa0327780:CDS | 60.0% | |
AGGACCGAGAGAGAGATGGG+AGG | + | chr2_4:39728290-39728309 | None:intergenic | 60.0% | |
GGAAAGGGCCGTCACAACTG+CGG | - | chr2_4:39728834-39728853 | Msa0327780:intron | 60.0% | |
! | GGGATCTGAGGTCGAGAGTG+AGG | - | chr2_4:39729032-39729051 | Msa0327780:intron | 60.0% |
TGAGGTCGAGAGTGAGGCAG+AGG | - | chr2_4:39729038-39729057 | Msa0327780:intron | 60.0% | |
GAGGTCGAGAGTGAGGCAGA+GGG | - | chr2_4:39729039-39729058 | Msa0327780:intron | 60.0% | |
GAGCTGAGGCGTAGCTCAAG+TGG | + | chr2_4:39731935-39731954 | None:intergenic | 60.0% | |
CCTCCCTCAGGTATCTCGTC+AGG | + | chr2_4:39733130-39733149 | None:intergenic | 60.0% | |
CCTGACGAGATACCTGAGGG+AGG | - | chr2_4:39733127-39733146 | Msa0327780:intron | 60.0% | |
ACTCACGGAGCCAGTCGTCT+AGG | - | chr2_4:39734063-39734082 | Msa0327780:intron | 60.0% | |
GGAGCCAGTCGTCTAGGTCA+AGG | - | chr2_4:39734069-39734088 | Msa0327780:intron | 60.0% | |
AGCCCCTTGACCTAGACGAC+TGG | + | chr2_4:39734076-39734095 | None:intergenic | 60.0% | |
! | GATGATCTTGGTGGCCGTCC+TGG | - | chr2_4:39734476-39734495 | Msa0327780:intron | 60.0% |
!! | CCGTCCTGGGAGCATTATGC+AGG | - | chr2_4:39734490-39734509 | Msa0327780:CDS | 60.0% |
TCTGGCCAATCGCTTCCGGC+TGG | + | chr2_4:39726194-39726213 | None:intergenic | 65.0% | |
AGGGGAGAAACGGGAACGGG+AGG | - | chr2_4:39728795-39728814 | Msa0327780:intron | 65.0% | |
!! | GAAAAACAGCGGCGCCGGTG+AGG | - | chr2_4:39728858-39728877 | Msa0327780:intron | 65.0% |
GGCAGCCGCGGCAAATGTCT+GGG | + | chr2_4:39732168-39732187 | None:intergenic | 65.0% | |
! | GTGTGAGGCGTTCCTCCCTC+AGG | + | chr2_4:39733142-39733161 | None:intergenic | 65.0% |
GGTGGCCAGCCGGAAGCGAT+TGG | - | chr2_4:39726186-39726205 | Msa0327780:three_prime_UTR | 70.0% | |
GCGGCGAAAAACAGCGGCGC+CGG | - | chr2_4:39728853-39728872 | Msa0327780:intron | 70.0% | |
GGGCAGCCGCGGCAAATGTC+TGG | + | chr2_4:39732169-39732188 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 39726179 | 39735347 | 39726179 | ID=Msa0327780;Name=Msa0327780 |
chr2_4 | mRNA | 39726179 | 39735347 | 39726179 | ID=Msa0327780-mRNA-1;Parent=Msa0327780;Name=Msa0327780-mRNA-1;_AED=0.25;_eAED=0.31;_QI=0|0.28|0.4|0.93|1|1|15|267|770 |
chr2_4 | exon | 39726179 | 39726500 | 39726179 | ID=Msa0327780-mRNA-1:exon:12033;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39726790 | 39726896 | 39726790 | ID=Msa0327780-mRNA-1:exon:12032;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39726997 | 39727134 | 39726997 | ID=Msa0327780-mRNA-1:exon:12031;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39727664 | 39727760 | 39727664 | ID=Msa0327780-mRNA-1:exon:12030;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39727987 | 39728018 | 39727987 | ID=Msa0327780-mRNA-1:exon:12029;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39728150 | 39728221 | 39728150 | ID=Msa0327780-mRNA-1:exon:12028;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39728304 | 39728436 | 39728304 | ID=Msa0327780-mRNA-1:exon:12027;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39729265 | 39729494 | 39729265 | ID=Msa0327780-mRNA-1:exon:12026;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39729808 | 39729928 | 39729808 | ID=Msa0327780-mRNA-1:exon:12025;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39730015 | 39730164 | 39730015 | ID=Msa0327780-mRNA-1:exon:12024;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39730518 | 39730569 | 39730518 | ID=Msa0327780-mRNA-1:exon:12023;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39730918 | 39730982 | 39730918 | ID=Msa0327780-mRNA-1:exon:12022;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39732642 | 39732743 | 39732642 | ID=Msa0327780-mRNA-1:exon:12021;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39732877 | 39732967 | 39732877 | ID=Msa0327780-mRNA-1:exon:12020;Parent=Msa0327780-mRNA-1 |
chr2_4 | exon | 39734480 | 39735347 | 39734480 | ID=Msa0327780-mRNA-1:exon:12019;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39734480 | 39735347 | 39734480 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39732877 | 39732967 | 39732877 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39732642 | 39732743 | 39732642 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39730918 | 39730982 | 39730918 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39730518 | 39730569 | 39730518 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39730015 | 39730164 | 39730015 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39729808 | 39729928 | 39729808 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39729265 | 39729494 | 39729265 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39728304 | 39728436 | 39728304 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39728150 | 39728221 | 39728150 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39727987 | 39728018 | 39727987 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39727664 | 39727760 | 39727664 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39726997 | 39727134 | 39726997 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39726790 | 39726896 | 39726790 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | CDS | 39726446 | 39726500 | 39726446 | ID=Msa0327780-mRNA-1:cds;Parent=Msa0327780-mRNA-1 |
chr2_4 | three_prime_UTR | 39726179 | 39726445 | 39726179 | ID=Msa0327780-mRNA-1:three_prime_utr;Parent=Msa0327780-mRNA-1 |
Gene Sequence |
Protein sequence |