Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227510 | MCH88425.1 | 87.952 | 166 | 19 | 1 | 65 | 230 | 10 | 174 | 5.84e-97 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227510 | sp|Q9FY99|G6PD2_ARATH | 82.840 | 169 | 28 | 1 | 64 | 232 | 280 | 447 | 1.62e-91 | 289 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227510 | A0A392MMU8 | 87.952 | 166 | 19 | 1 | 65 | 230 | 10 | 174 | 2.79e-97 | 296 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1227510 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0771800 | Msa1227510 | 0.954732 | 1.523688e-112 | -8.615850e-47 |
| Msa0220800 | Msa1227510 | 0.908001 | 2.752719e-81 | -8.615850e-47 |
| Msa1227510 | Msa1332970 | 0.829469 | 5.059629e-55 | -8.615850e-47 |
| Msa1096620 | Msa1227510 | 0.883569 | 4.017060e-71 | -8.615850e-47 |
| Msa1098140 | Msa1227510 | 0.961482 | 9.411804e-120 | -8.615850e-47 |
| Msa0276460 | Msa1227510 | 0.943576 | 9.379292e-103 | -8.615850e-47 |
| Msa0327780 | Msa1227510 | 0.921557 | 3.069663e-88 | -8.615850e-47 |
| Msa1155150 | Msa1227510 | 0.905666 | 3.372230e-80 | -8.615850e-47 |
| Msa0483120 | Msa1227510 | 0.835158 | 1.974500e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227510 | MtrunA17_Chr7g0222441 | 88.024 | 167 | 19 | 1 | 64 | 230 | 279 | 444 | 1.66e-96 | 299 |
| Msa1227510 | MtrunA17_Chr8g0341321 | 80.240 | 167 | 32 | 1 | 64 | 230 | 266 | 431 | 1.41e-87 | 275 |
| Msa1227510 | MtrunA17_Chr8g0358431 | 82.667 | 150 | 26 | 0 | 64 | 213 | 56 | 205 | 2.60e-85 | 257 |
| Msa1227510 | MtrunA17_Chr7g0228611 | 57.831 | 166 | 60 | 1 | 51 | 216 | 196 | 351 | 5.10e-54 | 186 |
| Msa1227510 | MtrunA17_Chr6g0458971 | 50.980 | 204 | 80 | 3 | 21 | 216 | 163 | 354 | 5.87e-54 | 186 |
| Msa1227510 | MtrunA17_Chr8g0356771 | 83.158 | 95 | 16 | 0 | 65 | 159 | 71 | 165 | 1.64e-50 | 167 |
| Msa1227510 | MtrunA17_Chr7g0271531 | 54.971 | 171 | 67 | 3 | 46 | 216 | 281 | 441 | 6.68e-50 | 176 |
| Msa1227510 | MtrunA17_Chr8g0356701 | 73.333 | 105 | 27 | 1 | 126 | 230 | 1 | 104 | 4.39e-47 | 156 |
| Msa1227510 | MtrunA17_Chr8g0356781 | 67.143 | 70 | 22 | 1 | 161 | 230 | 1 | 69 | 8.63e-23 | 95.5 |
| Msa1227510 | MtrunA17_Chr2g0326781 | 91.111 | 45 | 3 | 1 | 293 | 336 | 538 | 582 | 1.08e-18 | 87.8 |
| Msa1227510 | MtrunA17_Chr4g0035581 | 100.000 | 36 | 0 | 0 | 217 | 252 | 317 | 352 | 4.33e-16 | 80.1 |
| Msa1227510 | MtrunA17_Chr1g0199661 | 46.914 | 81 | 38 | 3 | 293 | 373 | 510 | 585 | 4.40e-13 | 70.9 |
| Msa1227510 | MtrunA17_Chr8g0388331 | 93.548 | 31 | 2 | 0 | 344 | 374 | 180 | 210 | 1.57e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1227510 | AT5G13110.1 | 82.840 | 169 | 28 | 1 | 64 | 232 | 280 | 447 | 1.64e-92 | 289 |
| Msa1227510 | AT1G24280.1 | 88.235 | 153 | 18 | 0 | 64 | 216 | 283 | 435 | 6.24e-91 | 285 |
| Msa1227510 | AT5G35790.1 | 77.246 | 167 | 37 | 1 | 64 | 230 | 261 | 426 | 1.30e-84 | 268 |
| Msa1227510 | AT3G27300.1 | 57.895 | 171 | 54 | 2 | 54 | 216 | 192 | 352 | 8.14e-56 | 191 |
| Msa1227510 | AT3G27300.3 | 57.895 | 171 | 54 | 2 | 54 | 216 | 192 | 352 | 8.14e-56 | 191 |
| Msa1227510 | AT3G27300.2 | 57.895 | 171 | 54 | 2 | 54 | 216 | 192 | 352 | 8.14e-56 | 191 |
| Msa1227510 | AT3G27300.5 | 57.895 | 171 | 54 | 2 | 54 | 216 | 246 | 406 | 3.23e-55 | 191 |
| Msa1227510 | AT3G27300.4 | 57.895 | 171 | 54 | 2 | 54 | 216 | 263 | 423 | 3.35e-55 | 191 |
| Msa1227510 | AT5G40760.2 | 56.725 | 171 | 56 | 2 | 54 | 216 | 191 | 351 | 3.43e-54 | 187 |
| Msa1227510 | AT5G40760.1 | 56.725 | 171 | 56 | 2 | 54 | 216 | 191 | 351 | 3.43e-54 | 187 |
| Msa1227510 | AT1G09420.1 | 53.012 | 166 | 65 | 3 | 52 | 216 | 312 | 465 | 1.12e-46 | 168 |
| Msa1227510 | AT1G09420.2 | 49.432 | 176 | 66 | 4 | 52 | 216 | 312 | 475 | 4.48e-43 | 159 |
| Msa1227510 | AT2G28320.1 | 77.778 | 45 | 9 | 1 | 293 | 336 | 548 | 592 | 3.47e-15 | 77.8 |
| Msa1227510 | AT2G16440.1 | 94.444 | 36 | 2 | 0 | 217 | 252 | 324 | 359 | 4.31e-15 | 77.4 |
| Msa1227510 | AT3G54800.2 | 66.667 | 45 | 14 | 1 | 293 | 336 | 545 | 589 | 3.32e-12 | 68.6 |
| Msa1227510 | AT3G54800.1 | 66.667 | 45 | 14 | 1 | 293 | 336 | 545 | 589 | 3.32e-12 | 68.6 |
Find 100 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATATTCTCAGCAGATTT+TGG | 0.204590 | 8_2:+2704989 | Msa1227510:CDS |
| CTCTGGTGTGGTTCTTATAT+TGG | 0.220904 | 8_2:-2705603 | None:intergenic |
| TGTAGGTACTTTGACAATTA+TGG | 0.237604 | 8_2:+2705111 | Msa1227510:intron |
| AGCAATATGGTGAAAGAAAA+TGG | 0.245087 | 8_2:+2704374 | Msa1227510:CDS |
| GGGCAGCCGCGGCAAATGTC+TGG | 0.287615 | 8_2:-2705684 | None:intergenic |
| CTTACTATTGCATGACAAAC+TGG | 0.357680 | 8_2:+2706685 | Msa1227510:CDS |
| GATGATCTTGGTGGCCGTCC+TGG | 0.359921 | 8_2:+2707993 | Msa1227510:CDS |
| AGCAAATAGATAAGTGGTTA+AGG | 0.372183 | 8_2:-2707922 | None:intergenic |
| GGAGGAAGAAGAACGGGAAC+GGG | 0.374447 | 8_2:+2702331 | Msa1227510:CDS |
| TCGATGAAAGTATCCATATC+AGG | 0.376038 | 8_2:-2707305 | None:intergenic |
| TATAGAATCGATCACTATCT+TGG | 0.382137 | 8_2:+2704875 | Msa1227510:intron |
| TCCTCTACATCCAAACTAAC+AGG | 0.382610 | 8_2:-2705198 | None:intergenic |
| AGTCTGGCTGATACCTGATA+TGG | 0.388600 | 8_2:+2707292 | Msa1227510:intron |
| CAAATAGCTGAGAAGTTAGA+AGG | 0.389483 | 8_2:+2704400 | Msa1227510:CDS |
| AATGGAAACTCCTGTTAGTT+TGG | 0.394148 | 8_2:+2705188 | Msa1227510:CDS |
| CATCGCACCTGATATGTCTT+TGG | 0.395784 | 8_2:-2707365 | None:intergenic |
| AGAAGAACGGGAACGGGAAA+GGG | 0.396624 | 8_2:+2702337 | Msa1227510:CDS |
| CATGACAAACTGGTGGATAC+TGG | 0.399287 | 8_2:+2706695 | Msa1227510:CDS |
| ACTACATCCTCGAGTTTAAT+CGG | 0.412521 | 8_2:-2705574 | None:intergenic |
| AAAGAAACCTACTTTAGATA+TGG | 0.414269 | 8_2:-2708243 | None:intergenic |
| CTTTGCCTAATTAAAATCAA+TGG | 0.418036 | 8_2:+2708768 | Msa1227510:three_prime_UTR |
| TTGAAGATCAATGCACTTGA+AGG | 0.424310 | 8_2:+2708608 | Msa1227510:three_prime_UTR |
| GCCTGTCAGGGATATAACTA+TGG | 0.426019 | 8_2:+2708534 | Msa1227510:intron |
| AAAAGGACCAAAGACATATC+AGG | 0.426577 | 8_2:+2707358 | Msa1227510:CDS |
| AAAAGGGGAGAAACGGGAAC+GGG | 0.427372 | 8_2:+2702310 | Msa1227510:CDS |
| TAGTTTCTTTGATCATTCAT+TGG | 0.431004 | 8_2:-2708851 | None:intergenic |
| GTCTGGGTTAAGCTGTCCTT+TGG | 0.440910 | 8_2:-2705667 | None:intergenic |
| TTGTAATTGTATATAACCTT+AGG | 0.442094 | 8_2:+2708731 | Msa1227510:three_prime_UTR |
| AAGAAGAACGGGAACGGGAA+AGG | 0.451694 | 8_2:+2702336 | Msa1227510:CDS |
| AGCTGAGAAGTTAGAAGGAA+GGG | 0.452156 | 8_2:+2704405 | Msa1227510:CDS |
| CATAAAAGCAAATAGATAAG+TGG | 0.452901 | 8_2:-2707928 | None:intergenic |
| ATGATCTTGGTGGCCGTCCT+GGG | 0.462970 | 8_2:+2707994 | Msa1227510:CDS |
| TGGATATGCAACACCTCCTC+TGG | 0.463674 | 8_2:-2705620 | None:intergenic |
| CTCGGTGTGCAAAACAAAGT+TGG | 0.468884 | 8_2:-2708563 | None:intergenic |
| GCAATATGGTGAAAGAAAAT+GGG | 0.474578 | 8_2:+2704375 | Msa1227510:CDS |
| GGAACGGGAGGAAGAAGAAC+GGG | 0.475533 | 8_2:+2702325 | Msa1227510:CDS |
| CCTCCCTCAGGTATCTCGTC+AGG | 0.476130 | 8_2:-2706644 | None:intergenic |
| ATGATTAAAGGAAACTGATA+AGG | 0.479594 | 8_2:+2704344 | Msa1227510:intron |
| ATCGAAAATTTAAACAGCGT+TGG | 0.484696 | 8_2:+2707323 | Msa1227510:CDS |
| ATAAGGTTGGTGAAGCAATA+TGG | 0.490665 | 8_2:+2704361 | Msa1227510:CDS |
| GTCATGATCTTAAGAAAAGA+AGG | 0.490748 | 8_2:-2708216 | None:intergenic |
| CTTCATAGATAATGCAAGAT+GGG | 0.490793 | 8_2:+2705708 | Msa1227510:CDS |
| CTTGCAGAAATATGCAGCAC+AGG | 0.492843 | 8_2:+2708140 | Msa1227510:intron |
| TCCTGTTAGTTTGGATGTAG+AGG | 0.492884 | 8_2:+2705197 | Msa1227510:CDS |
| TCGGTGTGCAAAACAAAGTT+GGG | 0.496240 | 8_2:-2708562 | None:intergenic |
| AGAGGACATTAGAAATGAAA+AGG | 0.504615 | 8_2:+2705215 | Msa1227510:CDS |
| GACAGAAGGGAAGATGATCT+TGG | 0.506460 | 8_2:+2707981 | Msa1227510:CDS |
| TGCAAATGGTTGCTGCAGAT+TGG | 0.511099 | 8_2:+2707949 | Msa1227510:CDS |
| TTAAGAAAAGAAGGATTCAA+AGG | 0.515731 | 8_2:-2708207 | None:intergenic |
| CCGTCCTGGGAGCATTATGC+AGG | 0.517123 | 8_2:+2708007 | Msa1227510:CDS |
| GGGAGGAAGAAGAACGGGAA+CGG | 0.518287 | 8_2:+2702330 | Msa1227510:CDS |
| AGGGGAGAAACGGGAACGGG+AGG | 0.518667 | 8_2:+2702313 | Msa1227510:CDS |
| TAGATAATGCAAGATGGGAT+GGG | 0.518772 | 8_2:+2705713 | Msa1227510:CDS |
| CTGGTGGATACTGGAAAGCC+AGG | 0.518819 | 8_2:+2706704 | Msa1227510:CDS |
| GGCAGCCGCGGCAAATGTCT+GGG | 0.520346 | 8_2:-2705683 | None:intergenic |
| GTGTGAGGCGTTCCTCCCTC+AGG | 0.520495 | 8_2:-2706656 | None:intergenic |
| TGTATTGCCTCGACCACAAA+GGG | 0.520587 | 8_2:-2704952 | None:intergenic |
| AATACTAGTCCTCTTTGCAA+TGG | 0.521201 | 8_2:+2705170 | Msa1227510:CDS |
| ATCTATGAAGTGGGCAGCCG+CGG | 0.523740 | 8_2:-2705695 | None:intergenic |
| CTATCTTGGAAAAGAGCTTG+TGG | 0.529498 | 8_2:+2704889 | Msa1227510:CDS |
| TTTGTTGTACATCAGGTGAC+TGG | 0.533031 | 8_2:+2706807 | Msa1227510:intron |
| TAAGAAAAGAAGGATTCAAA+GGG | 0.534209 | 8_2:-2708206 | None:intergenic |
| AGGCAACTTATAATTGCCTA+AGG | 0.535020 | 8_2:-2708747 | None:intergenic |
| TTAAAGGAAACTGATAAGGT+TGG | 0.535969 | 8_2:+2704348 | Msa1227510:intron |
| TCTATAGCTGCAAATTGAAG+TGG | 0.536075 | 8_2:-2708698 | None:intergenic |
| TAGCTGAGAAGTTAGAAGGA+AGG | 0.540309 | 8_2:+2704404 | Msa1227510:CDS |
| CTCACCTCAACTCTGTCACC+TGG | 0.549979 | 8_2:-2706722 | None:intergenic |
| ATCTTGCATTATCTATGAAG+TGG | 0.550073 | 8_2:-2705705 | None:intergenic |
| ATAGATAATGCAAGATGGGA+TGG | 0.550173 | 8_2:+2705712 | Msa1227510:CDS |
| TTGGTACTGAAGGACGTGGC+AGG | 0.552068 | 8_2:+2705008 | Msa1227510:CDS |
| GAGAAGTTAGAAGGAAGGGT+TGG | 0.557009 | 8_2:+2704409 | Msa1227510:CDS |
| AGAAATATGCAGCACAGGGT+GGG | 0.567302 | 8_2:+2708145 | Msa1227510:intron |
| ATGCAACACCTCCTCTGGTG+TGG | 0.571539 | 8_2:-2705615 | None:intergenic |
| ACTTCATAGATAATGCAAGA+TGG | 0.584523 | 8_2:+2705707 | Msa1227510:CDS |
| GGGAACGGGAGGAAGAAGAA+CGG | 0.587711 | 8_2:+2702324 | Msa1227510:CDS |
| ATTGGTTGAGATCTGACAGA+AGG | 0.589843 | 8_2:+2707967 | Msa1227510:CDS |
| CAGAAATATGCAGCACAGGG+TGG | 0.591099 | 8_2:+2708144 | Msa1227510:intron |
| CAGGAGTTTCCATTGCAAAG+AGG | 0.596729 | 8_2:-2705179 | None:intergenic |
| AGATAATGCAAGATGGGATG+GGG | 0.599941 | 8_2:+2705714 | Msa1227510:CDS |
| TTGGTTGAGATCTGACAGAA+GGG | 0.602460 | 8_2:+2707968 | Msa1227510:CDS |
| TGATGACAAAACTGTACCAA+AGG | 0.605343 | 8_2:+2705651 | Msa1227510:CDS |
| TCAACCTGCATAATGCTCCC+AGG | 0.618526 | 8_2:-2708011 | None:intergenic |
| TCTTGCATTATCTATGAAGT+GGG | 0.621537 | 8_2:-2705704 | None:intergenic |
| TATAAGAACCACACCAGAGG+AGG | 0.636996 | 8_2:+2705607 | Msa1227510:CDS |
| AAAGCCAGGTGACAGAGTTG+AGG | 0.641668 | 8_2:+2706718 | Msa1227510:CDS |
| TTGTTGCTAATCTTCCACCT+CGG | 0.643102 | 8_2:-2708581 | None:intergenic |
| ATGTATTGCCTCGACCACAA+AGG | 0.643641 | 8_2:-2704953 | None:intergenic |
| ACTATTGCATGACAAACTGG+TGG | 0.645480 | 8_2:+2706688 | Msa1227510:CDS |
| TATGAGACCGATTAAACTCG+AGG | 0.649881 | 8_2:+2705567 | Msa1227510:CDS |
| TTGCAGAAATATGCAGCACA+GGG | 0.650088 | 8_2:+2708141 | Msa1227510:intron |
| CCTGCATAATGCTCCCAGGA+CGG | 0.650448 | 8_2:-2708007 | None:intergenic |
| GGAAAGGGCCGTCACAACTG+CGG | 0.659297 | 8_2:+2702352 | Msa1227510:CDS |
| AATAGTAAGCTAACAGTGTG+AGG | 0.667908 | 8_2:-2706671 | None:intergenic |
| TCTCTCTTACTCTTCCTCAC+CGG | 0.671004 | 8_2:-2702390 | None:intergenic |
| AGAAGGGAAGATGATCTTGG+TGG | 0.671197 | 8_2:+2707984 | Msa1227510:CDS |
| CAATATAAGAACCACACCAG+AGG | 0.676256 | 8_2:+2705604 | Msa1227510:CDS |
| CTTAACCCAGACATTTGCCG+CGG | 0.676329 | 8_2:+2705678 | Msa1227510:CDS |
| GACACCTGACGAGATACCTG+AGG | 0.684151 | 8_2:+2706640 | Msa1227510:CDS |
| ACACCTGACGAGATACCTGA+GGG | 0.690721 | 8_2:+2706641 | Msa1227510:CDS |
| CCTGACGAGATACCTGAGGG+AGG | 0.736290 | 8_2:+2706644 | Msa1227510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTATTAATATGTTTTATT+TGG | + | chr8_2:2704317-2704336 | Msa1227510:intron | 10.0% |
| !!! | ATTTTTGTTTTGTTTTGTTT+TGG | + | chr8_2:2702218-2702237 | Msa1227510:intron | 15.0% |
| !!! | ATTTTTGTTTTGTTTTGTTT+TGG | + | chr8_2:2702218-2702237 | Msa1227510:intron | 15.0% |
| !! | TGAAAAGAAAGAAAAAAAAA+GGG | + | chr8_2:2702294-2702313 | Msa1227510:intron | 15.0% |
| !! | AAGTAACTAAAGAAAAATTA+GGG | + | chr8_2:2702621-2702640 | Msa1227510:intron | 15.0% |
| !! | TAATCTAAATCAACTAATTT+AGG | + | chr8_2:2702766-2702785 | Msa1227510:intron | 15.0% |
| !! | AATCTAAATCAACTAATTTA+GGG | + | chr8_2:2702767-2702786 | Msa1227510:intron | 15.0% |
| !! | ATTCTTATTGTATATGAAAA+AGG | + | chr8_2:2702984-2703003 | Msa1227510:intron | 15.0% |
| !!! | ATTGATTTTGAATTTTTAGA+CGG | + | chr8_2:2703082-2703101 | Msa1227510:intron | 15.0% |
| !! | TATAACTTACATATTTGAAA+TGG | - | chr8_2:2703854-2703873 | None:intergenic | 15.0% |
| !!! | TGGTTATATACTTTTTTTAT+AGG | + | chr8_2:2705245-2705264 | Msa1227510:intron | 15.0% |
| !!! | ATTTAAAACAGATGAATTAA+AGG | - | chr8_2:2705487-2705506 | None:intergenic | 15.0% |
| !!! | TTCTTATTTTATATCAAATG+AGG | - | chr8_2:2706040-2706059 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTGCTAAATTAGA+CGG | + | chr8_2:2706329-2706348 | Msa1227510:intron | 15.0% |
| !! | AATAATTATTTAAACTGTAC+TGG | + | chr8_2:2706428-2706447 | Msa1227510:intron | 15.0% |
| !! | ATAATTATTTAAACTGTACT+GGG | + | chr8_2:2706429-2706448 | Msa1227510:intron | 15.0% |
| !! | ATCAATATATTTATCATACA+AGG | - | chr8_2:2707056-2707075 | None:intergenic | 15.0% |
| !! | ATATATAAGTAATTACTTGA+TGG | - | chr8_2:2708074-2708093 | None:intergenic | 15.0% |
| !! | TTCATAGCTATTATTATATT+TGG | + | chr8_2:2708436-2708455 | Msa1227510:intron | 15.0% |
| !! | GTGAAAAGAAAGAAAAAAAA+AGG | + | chr8_2:2702293-2702312 | Msa1227510:intron | 20.0% |
| !! | GAAAAGAAAGAAAAAAAAAG+GGG | + | chr8_2:2702295-2702314 | Msa1227510:intron | 20.0% |
| !! | GAAGTAACTAAAGAAAAATT+AGG | + | chr8_2:2702620-2702639 | Msa1227510:intron | 20.0% |
| !! | AGTAACTAAAGAAAAATTAG+GGG | + | chr8_2:2702622-2702641 | Msa1227510:intron | 20.0% |
| !! | ATCTAAATCAACTAATTTAG+GGG | + | chr8_2:2702768-2702787 | Msa1227510:intron | 20.0% |
| !!! | TTGATTTTGAATTTTTAGAC+GGG | + | chr8_2:2703083-2703102 | Msa1227510:intron | 20.0% |
| !! | GAAATTGATTACTTTGAATT+TGG | + | chr8_2:2703256-2703275 | Msa1227510:intron | 20.0% |
| !! | ATTACTTTGAATTTGGATAT+GGG | + | chr8_2:2703263-2703282 | Msa1227510:intron | 20.0% |
| !!! | ATCTAAGATTTGATATGTTA+TGG | + | chr8_2:2703551-2703570 | Msa1227510:intron | 20.0% |
| !! | ATATTTGTTTATACGCTTAA+AGG | - | chr8_2:2703631-2703650 | None:intergenic | 20.0% |
| !! | TACCAAACTAAATATAAACA+TGG | + | chr8_2:2703872-2703891 | Msa1227510:intron | 20.0% |
| !! | ATCCATGTTTATATTTAGTT+TGG | - | chr8_2:2703877-2703896 | None:intergenic | 20.0% |
| !! | AAAATTTCCAAGATAATATC+CGG | - | chr8_2:2703900-2703919 | None:intergenic | 20.0% |
| !! | CAAAATAAAAAAAAGTGACA+GGG | - | chr8_2:2704016-2704035 | None:intergenic | 20.0% |
| !! | TCAAAATAAAAAAAAGTGAC+AGG | - | chr8_2:2704017-2704036 | None:intergenic | 20.0% |
| !!! | AATGATTTTCTTGATTACTA+AGG | + | chr8_2:2704153-2704172 | Msa1227510:intron | 20.0% |
| !! | TTATTTGGTATGATGATTAA+AGG | + | chr8_2:2704332-2704351 | Msa1227510:intron | 20.0% |
| !!! | TCTATTTTCATAAGCTATAT+TGG | + | chr8_2:2704666-2704685 | Msa1227510:intron | 20.0% |
| !!! | GTAAAGTGCTTTATTTAAAA+TGG | + | chr8_2:2704843-2704862 | Msa1227510:intron | 20.0% |
| !! | CAAAAATTAGATTTGAGAAT+CGG | - | chr8_2:2704931-2704950 | None:intergenic | 20.0% |
| !!! | CACTTTTTATGATCTTAAAA+TGG | + | chr8_2:2705057-2705076 | Msa1227510:intron | 20.0% |
| !!! | TTTCTACTTATATTTAAGGT+CGG | - | chr8_2:2705301-2705320 | None:intergenic | 20.0% |
| !! | AACCTTTCTACTTATATTTA+AGG | - | chr8_2:2705305-2705324 | None:intergenic | 20.0% |
| !!! | GATACTTTATTTAGTACAAA+AGG | - | chr8_2:2705903-2705922 | None:intergenic | 20.0% |
| !! | TTGACTTTGATGTTATATAT+TGG | - | chr8_2:2705927-2705946 | None:intergenic | 20.0% |
| !!! | AGATTTTTAAGTATTTGAGA+TGG | + | chr8_2:2706212-2706231 | Msa1227510:intron | 20.0% |
| !! | AAAACACATTGTTCAAAATA+GGG | - | chr8_2:2706497-2706516 | None:intergenic | 20.0% |
| !!! | AACATATCTTTTCTAATTTC+AGG | + | chr8_2:2706585-2706604 | Msa1227510:intron | 20.0% |
| !! | TTACTGATAAACAAATTATG+AGG | + | chr8_2:2706609-2706628 | Msa1227510:intron | 20.0% |
| !! | ATAAATATATTGATGAGCAT+GGG | + | chr8_2:2707062-2707081 | Msa1227510:intron | 20.0% |
| !!! | TATGTGTTGTTTAATTTTTC+AGG | + | chr8_2:2707261-2707280 | Msa1227510:intron | 20.0% |
| !!! | GAAGAAAGGTTTTAAAATTT+TGG | + | chr8_2:2707512-2707531 | Msa1227510:intron | 20.0% |
| !! | AAATCCATGATTTACTAAAA+AGG | - | chr8_2:2708317-2708336 | None:intergenic | 20.0% |
| !! | TTAACAGTAAAAGATTAGAA+TGG | - | chr8_2:2708477-2708496 | None:intergenic | 20.0% |
| !! | TTGTAATTGTATATAACCTT+AGG | + | chr8_2:2708731-2708750 | Msa1227510:three_prime_UTR | 20.0% |
| !!! | TGAATCCATTGATTTTAATT+AGG | - | chr8_2:2708776-2708795 | None:intergenic | 20.0% |
| !!! | CATATCAATTTTTCTTAACT+GGG | - | chr8_2:2708831-2708850 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTGTTTTGGATTG+TGG | + | chr8_2:2702225-2702244 | Msa1227510:intron | 25.0% |
| ! | GTTTGATTGAAAATTTGTGA+TGG | + | chr8_2:2702495-2702514 | Msa1227510:intron | 25.0% |
| ! | TTGATTTAGATTATGCATGA+GGG | - | chr8_2:2702759-2702778 | None:intergenic | 25.0% |
| ! | ATTCAATCAAATTATTCCAG+TGG | - | chr8_2:2702946-2702965 | None:intergenic | 25.0% |
| ! | ACTGGAATAATTTGATTGAA+TGG | + | chr8_2:2702945-2702964 | Msa1227510:intron | 25.0% |
| ! | CTGGAATAATTTGATTGAAT+GGG | + | chr8_2:2702946-2702965 | Msa1227510:intron | 25.0% |
| !!! | ATTTGATTGAATGGGTTTTA+TGG | + | chr8_2:2702954-2702973 | Msa1227510:intron | 25.0% |
| ! | CATATGAATGATTCAATCAT+AGG | + | chr8_2:2703172-2703191 | Msa1227510:intron | 25.0% |
| !! | TGATTCAATCATAGGTTTTA+TGG | + | chr8_2:2703180-2703199 | Msa1227510:intron | 25.0% |
| ! | GATTACTTTGAATTTGGATA+TGG | + | chr8_2:2703262-2703281 | Msa1227510:intron | 25.0% |
| ! | ATTGAGTGAATTATATGTTC+AGG | + | chr8_2:2703432-2703451 | Msa1227510:intron | 25.0% |
| !! | AACCTTTTTATTCACTATGT+TGG | - | chr8_2:2703520-2703539 | None:intergenic | 25.0% |
| ! | ACTAAATATAAACATGGATC+CGG | + | chr8_2:2703878-2703897 | Msa1227510:intron | 25.0% |
| !! | TCAAGAAAATCATTCTTTTG+AGG | - | chr8_2:2704147-2704166 | None:intergenic | 25.0% |
| !!! | TTTGTTTTGTTGTTTGATTG+TGG | + | chr8_2:2704217-2704236 | Msa1227510:intron | 25.0% |
| ! | ATGATTAAAGGAAACTGATA+AGG | + | chr8_2:2704344-2704363 | Msa1227510:intron | 25.0% |
| ! | ACTTATATGATAAGTGTGAA+TGG | - | chr8_2:2704578-2704597 | None:intergenic | 25.0% |
| ! | GACCTTAAATATAAGTAGAA+AGG | + | chr8_2:2705300-2705319 | Msa1227510:intron | 25.0% |
| !!! | ACAAATACATGTACCTTTTT+TGG | + | chr8_2:2705337-2705356 | Msa1227510:intron | 25.0% |
| !!! | ACCTTTTTTGGTCAAATATA+AGG | + | chr8_2:2705349-2705368 | Msa1227510:intron | 25.0% |
| ! | ACTTTCTTCTCAAAATCATT+TGG | + | chr8_2:2705413-2705432 | Msa1227510:intron | 25.0% |
| ! | CTTTCTTCTCAAAATCATTT+GGG | + | chr8_2:2705414-2705433 | Msa1227510:intron | 25.0% |
| ! | ATAACATCAAAGTCAATAGT+AGG | + | chr8_2:2705931-2705950 | Msa1227510:intron | 25.0% |
| !! | TCTCAATGACTACAAAATTT+TGG | + | chr8_2:2706000-2706019 | Msa1227510:intron | 25.0% |
| !!! | CTTGTTATTATGCATCATAT+AGG | - | chr8_2:2706182-2706201 | None:intergenic | 25.0% |
| ! | TAAAAGAGATGGGAAAATAT+TGG | - | chr8_2:2706245-2706264 | None:intergenic | 25.0% |
| ! | AAACACATTGTTCAAAATAG+GGG | - | chr8_2:2706496-2706515 | None:intergenic | 25.0% |
| ! | CAAAACACATTGTTCAAAAT+AGG | - | chr8_2:2706498-2706517 | None:intergenic | 25.0% |
| !!! | CTATTTTGAACAATGTGTTT+TGG | + | chr8_2:2706496-2706515 | Msa1227510:intron | 25.0% |
| ! | ATATTCTCATGTTTGTTCAA+TGG | + | chr8_2:2706772-2706791 | Msa1227510:intron | 25.0% |
| ! | GATTCATTTCATTGTTCTAA+AGG | + | chr8_2:2707003-2707022 | Msa1227510:intron | 25.0% |
| ! | GATAAATATATTGATGAGCA+TGG | + | chr8_2:2707061-2707080 | Msa1227510:intron | 25.0% |
| ! | TAAATATATTGATGAGCATG+GGG | + | chr8_2:2707063-2707082 | Msa1227510:intron | 25.0% |
| ! | TGTTTAAGAATCCGAAAAAA+GGG | + | chr8_2:2707676-2707695 | Msa1227510:intron | 25.0% |
| ! | CTGTATTGTGAAATCTTTAA+AGG | + | chr8_2:2707844-2707863 | Msa1227510:intron | 25.0% |
| ! | GAAAAAAATCTGATTGGTAA+AGG | - | chr8_2:2707878-2707897 | None:intergenic | 25.0% |
| ! | GTGAATGAAAAAAATCTGAT+TGG | - | chr8_2:2707884-2707903 | None:intergenic | 25.0% |
| ! | CATAAAAGCAAATAGATAAG+TGG | - | chr8_2:2707931-2707950 | None:intergenic | 25.0% |
| !!! | TCTATTTGCTTTTATGCAAA+TGG | + | chr8_2:2707935-2707954 | Msa1227510:CDS | 25.0% |
| ! | ATGTTTACAATGAAAAACTC+AGG | - | chr8_2:2708171-2708190 | None:intergenic | 25.0% |
| !! | TTTTTCATTGTAAACATCTG+TGG | + | chr8_2:2708174-2708193 | Msa1227510:CDS | 25.0% |
| ! | TAAGAAAAGAAGGATTCAAA+GGG | - | chr8_2:2708209-2708228 | None:intergenic | 25.0% |
| ! | TTAAGAAAAGAAGGATTCAA+AGG | - | chr8_2:2708210-2708229 | None:intergenic | 25.0% |
| ! | AAAGAAACCTACTTTAGATA+TGG | - | chr8_2:2708246-2708265 | None:intergenic | 25.0% |
| !!! | CTTTCCTTTTTAGTAAATCA+TGG | + | chr8_2:2708310-2708329 | Msa1227510:intron | 25.0% |
| ! | TTAATCATGAAATTGCAAGT+TGG | + | chr8_2:2708335-2708354 | Msa1227510:intron | 25.0% |
| ! | AATTAATCAAAGTTCTCAAG+TGG | + | chr8_2:2708398-2708417 | Msa1227510:intron | 25.0% |
| !!! | CATTGATTTTAATTAGGCAA+AGG | - | chr8_2:2708770-2708789 | None:intergenic | 25.0% |
| ! | CTTTGCCTAATTAAAATCAA+TGG | + | chr8_2:2708768-2708787 | Msa1227510:three_prime_UTR | 25.0% |
| !! | GCATATCAATTTTTCTTAAC+TGG | - | chr8_2:2708832-2708851 | None:intergenic | 25.0% |
| TGTGATAGATAGATTGTTGA+AGG | + | chr8_2:2702167-2702186 | Msa1227510:intron | 30.0% | |
| AGAAAAAAAAAGGGGAGAAA+CGG | + | chr8_2:2702303-2702322 | Msa1227510:CDS | 30.0% | |
| TCTAATTCTAATCTTGCATG+TGG | + | chr8_2:2702472-2702491 | Msa1227510:intron | 30.0% | |
| CTAATTCTAATCTTGCATGT+GGG | + | chr8_2:2702473-2702492 | Msa1227510:intron | 30.0% | |
| TGTGAGAAGAATGTTAAGTT+TGG | + | chr8_2:2702521-2702540 | Msa1227510:intron | 30.0% | |
| GTGAGAAGAATGTTAAGTTT+GGG | + | chr8_2:2702522-2702541 | Msa1227510:intron | 30.0% | |
| AATGTTAAGTTTGGGTAAGA+GGG | + | chr8_2:2702530-2702549 | Msa1227510:intron | 30.0% | |
| AGAGTAGAAGAAATGGAATT+AGG | + | chr8_2:2702583-2702602 | Msa1227510:intron | 30.0% | |
| GAGTAGAAGAAATGGAATTA+GGG | + | chr8_2:2702584-2702603 | Msa1227510:intron | 30.0% | |
| CCTTTAATTCTTTATGGTGA+TGG | - | chr8_2:2702716-2702735 | None:intergenic | 30.0% | |
| CCATCACCATAAAGAATTAA+AGG | + | chr8_2:2702713-2702732 | Msa1227510:intron | 30.0% | |
| TCACCATAAAGAATTAAAGG+TGG | + | chr8_2:2702716-2702735 | Msa1227510:intron | 30.0% | |
| CACCATAAAGAATTAAAGGT+GGG | + | chr8_2:2702717-2702736 | Msa1227510:intron | 30.0% | |
| AACCCACCTTTAATTCTTTA+TGG | - | chr8_2:2702722-2702741 | None:intergenic | 30.0% | |
| ! | GTTGATTTAGATTATGCATG+AGG | - | chr8_2:2702760-2702779 | None:intergenic | 30.0% |
| TGAATGATAGCATGATTGAA+AGG | + | chr8_2:2702907-2702926 | Msa1227510:intron | 30.0% | |
| GGAGATTATAAAAATGAGCT+AGG | + | chr8_2:2703005-2703024 | Msa1227510:intron | 30.0% | |
| !! | TTTATTGCAGCAGTTGATAA+AGG | + | chr8_2:2703478-2703497 | Msa1227510:intron | 30.0% |
| TGCCAACATAGTGAATAAAA+AGG | + | chr8_2:2703515-2703534 | Msa1227510:intron | 30.0% | |
| TCTCGCATAAACATATATGT+TGG | + | chr8_2:2703725-2703744 | Msa1227510:intron | 30.0% | |
| ! | TCTTTGAAAGAGTTGCTTTA+TGG | + | chr8_2:2703793-2703812 | Msa1227510:intron | 30.0% |
| !! | AATGTTTTCTGTTACTTGAC+AGG | + | chr8_2:2704040-2704059 | Msa1227510:intron | 30.0% |
| !! | ATGTTTTCTGTTACTTGACA+GGG | + | chr8_2:2704041-2704060 | Msa1227510:intron | 30.0% |
| !!! | TTGTTGTTTGATTGTGGTTT+TGG | + | chr8_2:2704223-2704242 | Msa1227510:intron | 30.0% |
| TTAAAGGAAACTGATAAGGT+TGG | + | chr8_2:2704348-2704367 | Msa1227510:intron | 30.0% | |
| AGCAATATGGTGAAAGAAAA+TGG | + | chr8_2:2704374-2704393 | Msa1227510:CDS | 30.0% | |
| GCAATATGGTGAAAGAAAAT+GGG | + | chr8_2:2704375-2704394 | Msa1227510:CDS | 30.0% | |
| CTTTAACAAGATCATTCAAG+CGG | + | chr8_2:2704478-2704497 | Msa1227510:intron | 30.0% | |
| !! | AACAATCCTAGAAGTGTTTA+TGG | + | chr8_2:2704757-2704776 | Msa1227510:intron | 30.0% |
| TAATTAGACCATGTTTGGAT+TGG | - | chr8_2:2704804-2704823 | None:intergenic | 30.0% | |
| ACAGATAATTAGACCATGTT+TGG | - | chr8_2:2704809-2704828 | None:intergenic | 30.0% | |
| TATAGAATCGATCACTATCT+TGG | + | chr8_2:2704875-2704894 | Msa1227510:intron | 30.0% | |
| ! | ATCTAATTTTTGACCCTTTG+TGG | + | chr8_2:2704939-2704958 | Msa1227510:CDS | 30.0% |
| ! | TTGATATTCTCAGCAGATTT+TGG | + | chr8_2:2704989-2705008 | Msa1227510:CDS | 30.0% |
| ! | AAAAAGTGTAAATGCTGCAA+AGG | - | chr8_2:2705045-2705064 | None:intergenic | 30.0% |
| TGTAGGTACTTTGACAATTA+TGG | + | chr8_2:2705111-2705130 | Msa1227510:intron | 30.0% | |
| AGAGGACATTAGAAATGAAA+AGG | + | chr8_2:2705215-2705234 | Msa1227510:CDS | 30.0% | |
| ! | TACTTATATTTAAGGTCGGA+GGG | - | chr8_2:2705297-2705316 | None:intergenic | 30.0% |
| GCCTTATATTTGACCAAAAA+AGG | - | chr8_2:2705353-2705372 | None:intergenic | 30.0% | |
| !! | TTTTTGGTCAAATATAAGGC+CGG | + | chr8_2:2705353-2705372 | Msa1227510:intron | 30.0% |
| CATGACTTTCAATTGCTTAA+TGG | + | chr8_2:2705520-2705539 | Msa1227510:intron | 30.0% | |
| !! | TACAGTTTTGTCATCAATGT+AGG | - | chr8_2:2705647-2705666 | None:intergenic | 30.0% |
| TCTTGCATTATCTATGAAGT+GGG | - | chr8_2:2705707-2705726 | None:intergenic | 30.0% | |
| ATCTTGCATTATCTATGAAG+TGG | - | chr8_2:2705708-2705727 | None:intergenic | 30.0% | |
| ACTTCATAGATAATGCAAGA+TGG | + | chr8_2:2705707-2705726 | Msa1227510:CDS | 30.0% | |
| CTTCATAGATAATGCAAGAT+GGG | + | chr8_2:2705708-2705727 | Msa1227510:CDS | 30.0% | |
| TGTATTCTGTATTGTGACAT+TGG | - | chr8_2:2705979-2705998 | None:intergenic | 30.0% | |
| TAACCAAGAAACACTTATTC+TGG | - | chr8_2:2706305-2706324 | None:intergenic | 30.0% | |
| !! | GGTAGATTTTAGTGATAAGT+TGG | + | chr8_2:2706450-2706469 | Msa1227510:intron | 30.0% |
| ! | TTTAGTGATAAGTTGGATGA+TGG | + | chr8_2:2706457-2706476 | Msa1227510:intron | 30.0% |
| !!! | TGGATTTTAGTTCATAAACC+TGG | + | chr8_2:2706551-2706570 | Msa1227510:intron | 30.0% |
| ATATGTTAATTGCAGTTTCC+AGG | - | chr8_2:2706572-2706591 | None:intergenic | 30.0% | |
| TAAACAAATTATGAGGCTTC+AGG | + | chr8_2:2706616-2706635 | Msa1227510:intron | 30.0% | |
| ! | ATCTATTTATCAGAGTGTCA+TGG | - | chr8_2:2706754-2706773 | None:intergenic | 30.0% |
| ATGTACAACAAAACACTCAT+GGG | - | chr8_2:2706799-2706818 | None:intergenic | 30.0% | |
| AGACAAGATGAAAAATGCAA+AGG | - | chr8_2:2706939-2706958 | None:intergenic | 30.0% | |
| ! | TGAATCATGCCAACTTTTAA+GGG | - | chr8_2:2706989-2707008 | None:intergenic | 30.0% |
| ! | ATGAATCATGCCAACTTTTA+AGG | - | chr8_2:2706990-2707009 | None:intergenic | 30.0% |
| ! | AAAATGTGTTGCTATCATGA+AGG | + | chr8_2:2707027-2707046 | Msa1227510:intron | 30.0% |
| AACAATTGACAACAAATGCA+GGG | - | chr8_2:2707221-2707240 | None:intergenic | 30.0% | |
| AAACAATTGACAACAAATGC+AGG | - | chr8_2:2707222-2707241 | None:intergenic | 30.0% | |
| !! | TTTTCAGGAAATATACAGTC+TGG | + | chr8_2:2707276-2707295 | Msa1227510:intron | 30.0% |
| ATCGAAAATTTAAACAGCGT+TGG | + | chr8_2:2707323-2707342 | Msa1227510:CDS | 30.0% | |
| GTTGGTTATCTACTCAAAAA+AGG | + | chr8_2:2707341-2707360 | Msa1227510:CDS | 30.0% | |
| AGAGTTGCACATTAATAAGA+TGG | - | chr8_2:2707433-2707452 | None:intergenic | 30.0% | |
| TATTATCCTCTTTGTACTCA+CGG | + | chr8_2:2707565-2707584 | Msa1227510:intron | 30.0% | |
| GTGTTTAAGAATCCGAAAAA+AGG | + | chr8_2:2707675-2707694 | Msa1227510:intron | 30.0% | |
| ! | AGCACATTCTTAAAGTATTC+CGG | - | chr8_2:2707733-2707752 | None:intergenic | 30.0% |
| TCATCGAATATGCAATTTCA+AGG | + | chr8_2:2707770-2707789 | Msa1227510:intron | 30.0% | |
| CATCGAATATGCAATTTCAA+GGG | + | chr8_2:2707771-2707790 | Msa1227510:intron | 30.0% | |
| ATCGAATATGCAATTTCAAG+GGG | + | chr8_2:2707772-2707791 | Msa1227510:intron | 30.0% | |
| AGCAAATAGATAAGTGGTTA+AGG | - | chr8_2:2707925-2707944 | None:intergenic | 30.0% | |
| GTCATGATCTTAAGAAAAGA+AGG | - | chr8_2:2708219-2708238 | None:intergenic | 30.0% | |
| !! | CTAATCTGAGTCTTTGAAAT+TGG | + | chr8_2:2708358-2708377 | Msa1227510:intron | 30.0% |
| ! | CAATTTTTCTTAACTGGGTT+CGG | - | chr8_2:2708826-2708845 | None:intergenic | 30.0% |
| TGGGAAATCTCTATTCATGA+AGG | + | chr8_2:2702138-2702157 | Msa1227510:intron | 35.0% | |
| GAAAAAAAAAGGGGAGAAAC+GGG | + | chr8_2:2702304-2702323 | Msa1227510:CDS | 35.0% | |
| ATGCATGCATGACTTTAGAT+TGG | - | chr8_2:2702427-2702446 | None:intergenic | 35.0% | |
| GAATGTTAAGTTTGGGTAAG+AGG | + | chr8_2:2702529-2702548 | Msa1227510:intron | 35.0% | |
| !! | GGTTTTCAAGACTGAGTAAT+TGG | + | chr8_2:2702643-2702662 | Msa1227510:intron | 35.0% |
| !! | AGGTTTATTGATTTAGCCAC+TGG | + | chr8_2:2702927-2702946 | Msa1227510:intron | 35.0% |
| ATAACTGCAACTTATGCAAC+TGG | - | chr8_2:2703110-2703129 | None:intergenic | 35.0% | |
| CATAAGTTGCAGTTATAAGC+TGG | + | chr8_2:2703114-2703133 | Msa1227510:intron | 35.0% | |
| ATAAAAGAAGCTTGCAGTTC+TGG | - | chr8_2:2703463-2703482 | None:intergenic | 35.0% | |
| ! | TTGAGTTGTAAACTGTCAAC+GGG | - | chr8_2:2703693-2703712 | None:intergenic | 35.0% |
| ! | GTTGAGTTGTAAACTGTCAA+CGG | - | chr8_2:2703694-2703713 | None:intergenic | 35.0% |
| TTGACAGTTTACAACTCAAC+AGG | + | chr8_2:2703694-2703713 | Msa1227510:intron | 35.0% | |
| TGACAGTTTACAACTCAACA+GGG | + | chr8_2:2703695-2703714 | Msa1227510:intron | 35.0% | |
| !! | ATTCTGAAGCGTGTAGAAAA+AGG | + | chr8_2:2704090-2704109 | Msa1227510:intron | 35.0% |
| ACTAAGGTAGCAGTTTATGT+TGG | + | chr8_2:2704169-2704188 | Msa1227510:intron | 35.0% | |
| !! | TAGCAGTTTATGTTGGTTTG+AGG | + | chr8_2:2704176-2704195 | Msa1227510:intron | 35.0% |
| TGAGGTTATGAGATGGTTAT+TGG | + | chr8_2:2704194-2704213 | Msa1227510:intron | 35.0% | |
| !! | ATAAGGTTGGTGAAGCAATA+TGG | + | chr8_2:2704361-2704380 | Msa1227510:CDS | 35.0% |
| CAAATAGCTGAGAAGTTAGA+AGG | + | chr8_2:2704400-2704419 | Msa1227510:CDS | 35.0% | |
| ! | TGACTGAGGATCAAATTTTC+AGG | + | chr8_2:2704505-2704524 | Msa1227510:intron | 35.0% |
| AACTACACTTTGACTGTGTT+TGG | + | chr8_2:2704534-2704553 | Msa1227510:intron | 35.0% | |
| !! | ACACTTCTAGGATTGTTTGA+AGG | - | chr8_2:2704754-2704773 | None:intergenic | 35.0% |
| CAAACAATCCAATCCAAACA+TGG | + | chr8_2:2704793-2704812 | Msa1227510:intron | 35.0% | |
| TTCATATCTGTTCCATGTGT+AGG | + | chr8_2:2705094-2705113 | Msa1227510:intron | 35.0% | |
| ! | ATTGTCAAAGTACCTACACA+TGG | - | chr8_2:2705109-2705128 | None:intergenic | 35.0% |
| AATACTAGTCCTCTTTGCAA+TGG | + | chr8_2:2705170-2705189 | Msa1227510:CDS | 35.0% | |
| AATGGAAACTCCTGTTAGTT+TGG | + | chr8_2:2705188-2705207 | Msa1227510:CDS | 35.0% | |
| AGAAATGAAAAGGTCTCATG+TGG | + | chr8_2:2705225-2705244 | Msa1227510:intron | 35.0% | |
| ! | CTACTTATATTTAAGGTCGG+AGG | - | chr8_2:2705298-2705317 | None:intergenic | 35.0% |
| !!! | AAAGTCCAGGTTTTAAACTC+TGG | - | chr8_2:2705398-2705417 | None:intergenic | 35.0% |
| !! | TGATTTTGAGAAGAAAGTCC+AGG | - | chr8_2:2705411-2705430 | None:intergenic | 35.0% |
| TCTTCTCAAAATCATTTGGG+TGG | + | chr8_2:2705417-2705436 | Msa1227510:intron | 35.0% | |
| ! | TCAATTGCTTAATGGATGTC+AGG | + | chr8_2:2705528-2705547 | Msa1227510:intron | 35.0% |
| ACTACATCCTCGAGTTTAAT+CGG | - | chr8_2:2705577-2705596 | None:intergenic | 35.0% | |
| ! | AAACTCGAGGATGTAGTTTT+AGG | + | chr8_2:2705580-2705599 | Msa1227510:CDS | 35.0% |
| TGATGACAAAACTGTACCAA+AGG | + | chr8_2:2705651-2705670 | Msa1227510:CDS | 35.0% | |
| ATAGATAATGCAAGATGGGA+TGG | + | chr8_2:2705712-2705731 | Msa1227510:CDS | 35.0% | |
| TAGATAATGCAAGATGGGAT+GGG | + | chr8_2:2705713-2705732 | Msa1227510:CDS | 35.0% | |
| !!! | TACCTTTTTTGATGAAGGCT+GGG | + | chr8_2:2705737-2705756 | Msa1227510:intron | 35.0% |
| TATTCCTTTCACTTACCTCT+TGG | - | chr8_2:2705776-2705795 | None:intergenic | 35.0% | |
| TAGCAGATCGTGAAAATTTG+CGG | + | chr8_2:2705817-2705836 | Msa1227510:intron | 35.0% | |
| !! | TTGTGACATTGGTTTGATGT+TGG | - | chr8_2:2705968-2705987 | None:intergenic | 35.0% |
| GATCTCAGCTTAAAAGAGAT+GGG | - | chr8_2:2706255-2706274 | None:intergenic | 35.0% | |
| TGATCTCAGCTTAAAAGAGA+TGG | - | chr8_2:2706256-2706275 | None:intergenic | 35.0% | |
| ! | TCTCTTTTAAGCTGAGATCA+AGG | + | chr8_2:2706256-2706275 | Msa1227510:intron | 35.0% |
| ! | CTCTTTTAAGCTGAGATCAA+GGG | + | chr8_2:2706257-2706276 | Msa1227510:intron | 35.0% |
| ATGCCAGAATAAGTGTTTCT+TGG | + | chr8_2:2706299-2706318 | Msa1227510:intron | 35.0% | |
| !! | GTTTTGGTCATGTGACTATT+TGG | + | chr8_2:2706512-2706531 | Msa1227510:intron | 35.0% |
| !! | TCATGTGACTATTTGGTGTA+AGG | + | chr8_2:2706519-2706538 | Msa1227510:intron | 35.0% |
| ! | TTGGTGTAAGGTTTTTCACT+TGG | + | chr8_2:2706531-2706550 | Msa1227510:intron | 35.0% |
| AATAGTAAGCTAACAGTGTG+AGG | - | chr8_2:2706674-2706693 | None:intergenic | 35.0% | |
| CTTACTATTGCATGACAAAC+TGG | + | chr8_2:2706685-2706704 | Msa1227510:CDS | 35.0% | |
| GATGTACAACAAAACACTCA+TGG | - | chr8_2:2706800-2706819 | None:intergenic | 35.0% | |
| !! | TGAGTGTTTTGTTGTACATC+AGG | + | chr8_2:2706800-2706819 | Msa1227510:intron | 35.0% |
| GACTTAACAGTTCTCTTAGT+TGG | - | chr8_2:2706864-2706883 | None:intergenic | 35.0% | |
| !!! | GACATTTGTTTTGTTCCGTT+TGG | + | chr8_2:2706963-2706982 | Msa1227510:intron | 35.0% |
| !!! | TTGTTGATTTTGGTTGAAGC+AGG | + | chr8_2:2707086-2707105 | Msa1227510:intron | 35.0% |
| !!! | TGTTGATTTTGGTTGAAGCA+GGG | + | chr8_2:2707087-2707106 | Msa1227510:intron | 35.0% |
| TCTTAATAAGCAATCAGAGC+TGG | + | chr8_2:2707150-2707169 | Msa1227510:intron | 35.0% | |
| !! | TCGATGAAAGTATCCATATC+AGG | - | chr8_2:2707308-2707327 | None:intergenic | 35.0% |
| AAAAGGACCAAAGACATATC+AGG | + | chr8_2:2707358-2707377 | Msa1227510:CDS | 35.0% | |
| TCAAACAAACCTCTATAGAG+TGG | - | chr8_2:2707404-2707423 | None:intergenic | 35.0% | |
| ! | GGTAAGGCATTATAGATTCT+TGG | - | chr8_2:2707464-2707483 | None:intergenic | 35.0% |
| TAATACCTGCATGTGTCAAA+AGG | - | chr8_2:2707550-2707569 | None:intergenic | 35.0% | |
| !!! | GATAAGGTACACCCTTTTTT+CGG | - | chr8_2:2707690-2707709 | None:intergenic | 35.0% |
| GGGAACTTTGGTATAAGATA+AGG | - | chr8_2:2707706-2707725 | None:intergenic | 35.0% | |
| ! | TCTTAAAGTATTCCGGGAAA+GGG | - | chr8_2:2707726-2707745 | None:intergenic | 35.0% |
| ! | TTCTTAAAGTATTCCGGGAA+AGG | - | chr8_2:2707727-2707746 | None:intergenic | 35.0% |
| ! | GCACATTCTTAAAGTATTCC+GGG | - | chr8_2:2707732-2707751 | None:intergenic | 35.0% |
| AAATTAATGTTGTGCCTGTC+AGG | + | chr8_2:2708521-2708540 | Msa1227510:intron | 35.0% | |
| AATTAATGTTGTGCCTGTCA+GGG | + | chr8_2:2708522-2708541 | Msa1227510:intron | 35.0% | |
| TTGAAGATCAATGCACTTGA+AGG | + | chr8_2:2708608-2708627 | Msa1227510:three_prime_UTR | 35.0% | |
| TCTATAGCTGCAAATTGAAG+TGG | - | chr8_2:2708701-2708720 | None:intergenic | 35.0% | |
| AGGCAACTTATAATTGCCTA+AGG | - | chr8_2:2708750-2708769 | None:intergenic | 35.0% | |
| AAAGTGATAGGAGAAGTTGC+TGG | + | chr8_2:2702115-2702134 | Msa1227510:intron | 40.0% | |
| !!! | GTTTTGTTTTGGATTGTGGC+TGG | + | chr8_2:2702229-2702248 | Msa1227510:intron | 40.0% |
| CATGCATGCATAATTCTCTC+TGG | + | chr8_2:2702436-2702455 | Msa1227510:intron | 40.0% | |
| AGGGAGAAGAGTAGAAGAAA+TGG | + | chr8_2:2702576-2702595 | Msa1227510:intron | 40.0% | |
| CAAGACTGAGTAATTGGAGA+TGG | + | chr8_2:2702649-2702668 | Msa1227510:intron | 40.0% | |
| AGTAATTGGAGATGGAAGCT+AGG | + | chr8_2:2702657-2702676 | Msa1227510:intron | 40.0% | |
| AGATGGAAGCTAGGAACTTA+AGG | + | chr8_2:2702666-2702685 | Msa1227510:intron | 40.0% | |
| AGATTATGCATGAGGGATGA+GGG | - | chr8_2:2702752-2702771 | None:intergenic | 40.0% | |
| TAGATTATGCATGAGGGATG+AGG | - | chr8_2:2702753-2702772 | None:intergenic | 40.0% | |
| TCACACGAAGACAATGCATT+TGG | - | chr8_2:2703290-2703309 | None:intergenic | 40.0% | |
| CATTGTCTTCGTGTGAGTAT+TGG | + | chr8_2:2703294-2703313 | Msa1227510:intron | 40.0% | |
| TGAGTTGTAAACTGTCAACG+GGG | - | chr8_2:2703692-2703711 | None:intergenic | 40.0% | |
| CATGGATCCGGATATTATCT+TGG | + | chr8_2:2703890-2703909 | Msa1227510:intron | 40.0% | |
| TTGAAGAATGAGCAGCATGA+AGG | - | chr8_2:2703974-2703993 | None:intergenic | 40.0% | |
| GTGACAGGGAACATATCATT+AGG | - | chr8_2:2704002-2704021 | None:intergenic | 40.0% | |
| TGAAGCGTGTAGAAAAAGGT+TGG | + | chr8_2:2704094-2704113 | Msa1227510:intron | 40.0% | |
| GAAGCGTGTAGAAAAAGGTT+GGG | + | chr8_2:2704095-2704114 | Msa1227510:intron | 40.0% | |
| AAGCGTGTAGAAAAAGGTTG+GGG | + | chr8_2:2704096-2704115 | Msa1227510:intron | 40.0% | |
| !! | GTTGGTTTGAGGTTATGAGA+TGG | + | chr8_2:2704187-2704206 | Msa1227510:intron | 40.0% |
| TAGCTGAGAAGTTAGAAGGA+AGG | + | chr8_2:2704404-2704423 | Msa1227510:CDS | 40.0% | |
| AGCTGAGAAGTTAGAAGGAA+GGG | + | chr8_2:2704405-2704424 | Msa1227510:CDS | 40.0% | |
| TGATCTTGTTAAAGCAGCTG+AGG | - | chr8_2:2704472-2704491 | None:intergenic | 40.0% | |
| CTATCTTGGAAAAGAGCTTG+TGG | + | chr8_2:2704889-2704908 | Msa1227510:CDS | 40.0% | |
| !! | TCAGCAGATTTTGGTACTGA+AGG | + | chr8_2:2704998-2705017 | Msa1227510:CDS | 40.0% |
| ! | TCCTGTTAGTTTGGATGTAG+AGG | + | chr8_2:2705197-2705216 | Msa1227510:CDS | 40.0% |
| TCCTCTACATCCAAACTAAC+AGG | - | chr8_2:2705201-2705220 | None:intergenic | 40.0% | |
| CTTCTAGCATATACATCCTC+CGG | - | chr8_2:2705375-2705394 | None:intergenic | 40.0% | |
| ! | AGAAGCCAGAGTTTAAAACC+TGG | + | chr8_2:2705390-2705409 | Msa1227510:intron | 40.0% |
| TATGAGACCGATTAAACTCG+AGG | + | chr8_2:2705567-2705586 | Msa1227510:CDS | 40.0% | |
| CTCTGGTGTGGTTCTTATAT+TGG | - | chr8_2:2705606-2705625 | None:intergenic | 40.0% | |
| CAATATAAGAACCACACCAG+AGG | + | chr8_2:2705604-2705623 | Msa1227510:CDS | 40.0% | |
| ! | GTTTTGTCATCAATGTAGGC+TGG | - | chr8_2:2705643-2705662 | None:intergenic | 40.0% |
| AGATAATGCAAGATGGGATG+GGG | + | chr8_2:2705714-2705733 | Msa1227510:CDS | 40.0% | |
| !!! | TGGGGTACCTTTTTTGATGA+AGG | + | chr8_2:2705732-2705751 | Msa1227510:intron | 40.0% |
| !!! | GTACCTTTTTTGATGAAGGC+TGG | + | chr8_2:2705736-2705755 | Msa1227510:intron | 40.0% |
| TTCCCAGCCTTCATCAAAAA+AGG | - | chr8_2:2705742-2705761 | None:intergenic | 40.0% | |
| AAAATAGGGGCTAATGACCA+TGG | - | chr8_2:2706483-2706502 | None:intergenic | 40.0% | |
| ACTATTGCATGACAAACTGG+TGG | + | chr8_2:2706688-2706707 | Msa1227510:CDS | 40.0% | |
| ! | TTTGTTGTACATCAGGTGAC+TGG | + | chr8_2:2706807-2706826 | Msa1227510:intron | 40.0% |
| ATCAGGTGACTGGTATATAC+AGG | + | chr8_2:2706817-2706836 | Msa1227510:intron | 40.0% | |
| TCAGGTGACTGGTATATACA+GGG | + | chr8_2:2706818-2706837 | Msa1227510:intron | 40.0% | |
| ATACAGGGCTATGAATGTCA+AGG | + | chr8_2:2706833-2706852 | Msa1227510:intron | 40.0% | |
| !!! | GTTGATTTTGGTTGAAGCAG+GGG | + | chr8_2:2707088-2707107 | Msa1227510:intron | 40.0% |
| !!! | TTGATTTTGGTTGAAGCAGG+GGG | + | chr8_2:2707089-2707108 | Msa1227510:intron | 40.0% |
| ! | TTTTACGCTCCACTCTATAG+AGG | + | chr8_2:2707392-2707411 | Msa1227510:intron | 40.0% |
| AACCTTTCTTCCCCTTATAG+AGG | - | chr8_2:2707503-2707522 | None:intergenic | 40.0% | |
| ! | ACAATCCTTTTGACACATGC+AGG | + | chr8_2:2707542-2707561 | Msa1227510:intron | 40.0% |
| TATACCAAAGTTCCCTTTCC+CGG | + | chr8_2:2707711-2707730 | Msa1227510:intron | 40.0% | |
| ATTGGTTGAGATCTGACAGA+AGG | + | chr8_2:2707967-2707986 | Msa1227510:CDS | 40.0% | |
| TTGGTTGAGATCTGACAGAA+GGG | + | chr8_2:2707968-2707987 | Msa1227510:CDS | 40.0% | |
| ! | AGCATTATGCAGGTTGACTT+TGG | + | chr8_2:2708017-2708036 | Msa1227510:intron | 40.0% |
| TTGCAGAAATATGCAGCACA+GGG | + | chr8_2:2708141-2708160 | Msa1227510:intron | 40.0% | |
| ! | GACTCTGCCATATCTAAAGT+AGG | + | chr8_2:2708236-2708255 | Msa1227510:intron | 40.0% |
| TCAAAGTTCTCAAGTGGCAA+CGG | + | chr8_2:2708404-2708423 | Msa1227510:intron | 40.0% | |
| TCGGTGTGCAAAACAAAGTT+GGG | - | chr8_2:2708565-2708584 | None:intergenic | 40.0% | |
| TTGTTGCTAATCTTCCACCT+CGG | - | chr8_2:2708584-2708603 | None:intergenic | 40.0% | |
| TGATAGGAGAAGTTGCTGGT+GGG | + | chr8_2:2702119-2702138 | Msa1227510:intron | 45.0% | |
| AAAAAGGGGAGAAACGGGAA+CGG | + | chr8_2:2702309-2702328 | Msa1227510:CDS | 45.0% | |
| TCTCTCTTACTCTTCCTCAC+CGG | - | chr8_2:2702393-2702412 | None:intergenic | 45.0% | |
| GAGGAAGAGTAAGAGAGAGA+CGG | + | chr8_2:2702395-2702414 | Msa1227510:intron | 45.0% | |
| GCAGAAAATAGCTTCAGTGC+AGG | + | chr8_2:2703045-2703064 | Msa1227510:intron | 45.0% | |
| ! | AAAGAAGCTTGCAGTTCTGG+AGG | - | chr8_2:2703460-2703479 | None:intergenic | 45.0% |
| !!! | CGGGGTGGATTGCTTTTTTT+CGG | - | chr8_2:2703674-2703693 | None:intergenic | 45.0% |
| TGCAATGAGTTCTGCGTCTA+TGG | + | chr8_2:2703923-2703942 | Msa1227510:intron | 45.0% | |
| GAATGAGCAGCATGAAGGAA+TGG | - | chr8_2:2703969-2703988 | None:intergenic | 45.0% | |
| ! | CTGTTACTTGACAGGGATGT+TGG | + | chr8_2:2704048-2704067 | Msa1227510:intron | 45.0% |
| GTAGAAAAAGGTTGGGGTCA+AGG | + | chr8_2:2704102-2704121 | Msa1227510:intron | 45.0% | |
| GAGAAGTTAGAAGGAAGGGT+TGG | + | chr8_2:2704409-2704428 | Msa1227510:CDS | 45.0% | |
| ATTCAAGCGGTATCTGACTG+AGG | + | chr8_2:2704491-2704510 | Msa1227510:intron | 45.0% | |
| GGATTGTTTGAAGGAGCTCA+AGG | - | chr8_2:2704745-2704764 | None:intergenic | 45.0% | |
| CCACTGCCATAAACACTTCT+AGG | - | chr8_2:2704766-2704785 | None:intergenic | 45.0% | |
| !! | CCTAGAAGTGTTTATGGCAG+TGG | + | chr8_2:2704763-2704782 | Msa1227510:intron | 45.0% |
| ! | TTTTTGACCCTTTGTGGTCG+AGG | + | chr8_2:2704945-2704964 | Msa1227510:CDS | 45.0% |
| TGTATTGCCTCGACCACAAA+GGG | - | chr8_2:2704955-2704974 | None:intergenic | 45.0% | |
| ATGTATTGCCTCGACCACAA+AGG | - | chr8_2:2704956-2704975 | None:intergenic | 45.0% | |
| !! | GATTTTGGTACTGAAGGACG+TGG | + | chr8_2:2705004-2705023 | Msa1227510:CDS | 45.0% |
| CAGGAGTTTCCATTGCAAAG+AGG | - | chr8_2:2705182-2705201 | None:intergenic | 45.0% | |
| TTGGTCAAATATAAGGCCGG+AGG | + | chr8_2:2705356-2705375 | Msa1227510:intron | 45.0% | |
| ! | GCTTAATGGATGTCAGGTCA+AGG | + | chr8_2:2705534-2705553 | Msa1227510:intron | 45.0% |
| TATAAGAACCACACCAGAGG+AGG | + | chr8_2:2705607-2705626 | Msa1227510:CDS | 45.0% | |
| !! | GGAAAGCATTACACACCAAG+AGG | + | chr8_2:2705758-2705777 | Msa1227510:intron | 45.0% |
| CACACCAAGAGGTAAGTGAA+AGG | + | chr8_2:2705769-2705788 | Msa1227510:intron | 45.0% | |
| ! | GATAAGTTGGATGATGGCCA+TGG | + | chr8_2:2706463-2706482 | Msa1227510:intron | 45.0% |
| ! | CATGACAAACTGGTGGATAC+TGG | + | chr8_2:2706695-2706714 | Msa1227510:CDS | 45.0% |
| AGGGCTATGAATGTCAAGGT+GGG | + | chr8_2:2706837-2706856 | Msa1227510:intron | 45.0% | |
| TCCGTTTGGCCCTTAAAAGT+TGG | + | chr8_2:2706977-2706996 | Msa1227510:intron | 45.0% | |
| !! | GCCAACTTTTAAGGGCCAAA+CGG | - | chr8_2:2706981-2707000 | None:intergenic | 45.0% |
| !!! | GAGCATGGGGTTGTTGATTT+TGG | + | chr8_2:2707076-2707095 | Msa1227510:intron | 45.0% |
| AGTCTGGCTGATACCTGATA+TGG | + | chr8_2:2707292-2707311 | Msa1227510:intron | 45.0% | |
| CATCGCACCTGATATGTCTT+TGG | - | chr8_2:2707368-2707387 | None:intergenic | 45.0% | |
| CTTATAGAGGTGGCTAGGAA+GGG | - | chr8_2:2707490-2707509 | None:intergenic | 45.0% | |
| CTTCCTAGCCACCTCTATAA+GGG | + | chr8_2:2707489-2707508 | Msa1227510:intron | 45.0% | |
| TTCCTAGCCACCTCTATAAG+GGG | + | chr8_2:2707490-2707509 | Msa1227510:intron | 45.0% | |
| CTTTCTTCCCCTTATAGAGG+TGG | - | chr8_2:2707500-2707519 | None:intergenic | 45.0% | |
| CACCTCTATAAGGGGAAGAA+AGG | + | chr8_2:2707498-2707517 | Msa1227510:intron | 45.0% | |
| TATTCCGGGAAAGGGAACTT+TGG | - | chr8_2:2707718-2707737 | None:intergenic | 45.0% | |
| TGCAAATGGTTGCTGCAGAT+TGG | + | chr8_2:2707949-2707968 | Msa1227510:CDS | 45.0% | |
| GACAGAAGGGAAGATGATCT+TGG | + | chr8_2:2707981-2708000 | Msa1227510:CDS | 45.0% | |
| AGAAGGGAAGATGATCTTGG+TGG | + | chr8_2:2707984-2708003 | Msa1227510:CDS | 45.0% | |
| !!! | GCAGGTTGACTTTGGTGTTT+TGG | + | chr8_2:2708025-2708044 | Msa1227510:intron | 45.0% |
| CTTGCAGAAATATGCAGCAC+AGG | + | chr8_2:2708140-2708159 | Msa1227510:intron | 45.0% | |
| AGAAATATGCAGCACAGGGT+GGG | + | chr8_2:2708145-2708164 | Msa1227510:intron | 45.0% | |
| GCCTGTCAGGGATATAACTA+TGG | + | chr8_2:2708534-2708553 | Msa1227510:intron | 45.0% | |
| GCCATAGTTATATCCCTGAC+AGG | - | chr8_2:2708538-2708557 | None:intergenic | 45.0% | |
| ! | CTCGGTGTGCAAAACAAAGT+TGG | - | chr8_2:2708566-2708585 | None:intergenic | 45.0% |
| !!! | CAACTTTGTTTTGCACACCG+AGG | + | chr8_2:2708564-2708583 | Msa1227510:CDS | 45.0% |
| GTGATAGGAGAAGTTGCTGG+TGG | + | chr8_2:2702118-2702137 | Msa1227510:intron | 50.0% | |
| AAAAGGGGAGAAACGGGAAC+GGG | + | chr8_2:2702310-2702329 | Msa1227510:CDS | 50.0% | |
| AAGAAGAACGGGAACGGGAA+AGG | + | chr8_2:2702336-2702355 | Msa1227510:CDS | 50.0% | |
| AGAAGAACGGGAACGGGAAA+GGG | + | chr8_2:2702337-2702356 | Msa1227510:CDS | 50.0% | |
| ! | GTTTTTCGCCGCAGTTGTGA+CGG | - | chr8_2:2702363-2702382 | None:intergenic | 50.0% |
| ACAACTGCGGCGAAAAACAG+CGG | + | chr8_2:2702365-2702384 | Msa1227510:CDS | 50.0% | |
| GTTTGGGTAAGAGGGATCTG+AGG | + | chr8_2:2702538-2702557 | Msa1227510:intron | 50.0% | |
| TGCATGAGGGATGAGGGAAA+GGG | - | chr8_2:2702746-2702765 | None:intergenic | 50.0% | |
| ATGCATGAGGGATGAGGGAA+AGG | - | chr8_2:2702747-2702766 | None:intergenic | 50.0% | |
| !! | GGTTTTATGGACTGCTGTGC+TGG | + | chr8_2:2703193-2703212 | Msa1227510:intron | 50.0% |
| ! | ATGGACTGCTGTGCTGGAAT+TGG | + | chr8_2:2703199-2703218 | Msa1227510:intron | 50.0% |
| GTTGTAAACTGTCAACGGGG+TGG | - | chr8_2:2703689-2703708 | None:intergenic | 50.0% | |
| TACGCCTCAGCTCATGGTTA+TGG | + | chr8_2:2705460-2705479 | Msa1227510:intron | 50.0% | |
| AGGTCCATAACCATGAGCTG+AGG | - | chr8_2:2705467-2705486 | None:intergenic | 50.0% | |
| TGGATATGCAACACCTCCTC+TGG | - | chr8_2:2705623-2705642 | None:intergenic | 50.0% | |
| GTCTGGGTTAAGCTGTCCTT+TGG | - | chr8_2:2705670-2705689 | None:intergenic | 50.0% | |
| CTTAACCCAGACATTTGCCG+CGG | + | chr8_2:2705678-2705697 | Msa1227510:CDS | 50.0% | |
| ACACCTGACGAGATACCTGA+GGG | + | chr8_2:2706641-2706660 | Msa1227510:CDS | 50.0% | |
| AAAGCCAGGTGACAGAGTTG+AGG | + | chr8_2:2706718-2706737 | Msa1227510:CDS | 50.0% | |
| CAGGGCTATGAATGTCAAGG+TGG | + | chr8_2:2706836-2706855 | Msa1227510:intron | 50.0% | |
| GGGGATCAGTCAACAGAAAG+AGG | + | chr8_2:2707108-2707127 | Msa1227510:intron | 50.0% | |
| TGGCTAGGAAGGGATAGGTA+AGG | - | chr8_2:2707480-2707499 | None:intergenic | 50.0% | |
| CCTTATAGAGGTGGCTAGGA+AGG | - | chr8_2:2707491-2707510 | None:intergenic | 50.0% | |
| CCTTCCTAGCCACCTCTATA+AGG | + | chr8_2:2707488-2707507 | Msa1227510:intron | 50.0% | |
| TTCCCCTTATAGAGGTGGCT+AGG | - | chr8_2:2707495-2707514 | None:intergenic | 50.0% | |
| TCAACCTGCATAATGCTCCC+AGG | - | chr8_2:2708014-2708033 | None:intergenic | 50.0% | |
| CAGAAATATGCAGCACAGGG+TGG | + | chr8_2:2708144-2708163 | Msa1227510:intron | 50.0% | |
| !!! | CTTTGTTTTGCACACCGAGG+TGG | + | chr8_2:2708567-2708586 | Msa1227510:CDS | 50.0% |
| GGGAACGGGAGGAAGAAGAA+CGG | + | chr8_2:2702324-2702343 | Msa1227510:CDS | 55.0% | |
| GGAACGGGAGGAAGAAGAAC+GGG | + | chr8_2:2702325-2702344 | Msa1227510:CDS | 55.0% | |
| GGGAGGAAGAAGAACGGGAA+CGG | + | chr8_2:2702330-2702349 | Msa1227510:CDS | 55.0% | |
| GGAGGAAGAAGAACGGGAAC+GGG | + | chr8_2:2702331-2702350 | Msa1227510:CDS | 55.0% | |
| !! | ATGGTGATGGCAGCAAGCTC+TGG | - | chr8_2:2702703-2702722 | None:intergenic | 55.0% |
| GCAAGCAGTGTAGAGAGCGA+TGG | + | chr8_2:2704431-2704450 | Msa1227510:intron | 55.0% | |
| ! | TTGGTACTGAAGGACGTGGC+AGG | + | chr8_2:2705008-2705027 | Msa1227510:CDS | 55.0% |
| TTGAGCTACGCCTCAGCTCA+TGG | + | chr8_2:2705454-2705473 | Msa1227510:intron | 55.0% | |
| ATGCAACACCTCCTCTGGTG+TGG | - | chr8_2:2705618-2705637 | None:intergenic | 55.0% | |
| ATCTATGAAGTGGGCAGCCG+CGG | - | chr8_2:2705698-2705717 | None:intergenic | 55.0% | |
| GACACCTGACGAGATACCTG+AGG | + | chr8_2:2706640-2706659 | Msa1227510:CDS | 55.0% | |
| ! | CTGGTGGATACTGGAAAGCC+AGG | + | chr8_2:2706704-2706723 | Msa1227510:CDS | 55.0% |
| CTCACCTCAACTCTGTCACC+TGG | - | chr8_2:2706725-2706744 | None:intergenic | 55.0% | |
| AGAGGTGGCTAGGAAGGGAT+AGG | - | chr8_2:2707485-2707504 | None:intergenic | 55.0% | |
| CTGGCTCCGTGAGTACAAAG+AGG | - | chr8_2:2707574-2707593 | None:intergenic | 55.0% | |
| GAGCCAGTCGTCTAGGTCAA+GGG | + | chr8_2:2707587-2707606 | Msa1227510:intron | 55.0% | |
| AGCCAGTCGTCTAGGTCAAG+GGG | + | chr8_2:2707588-2707607 | Msa1227510:intron | 55.0% | |
| ! | ATGATCTTGGTGGCCGTCCT+GGG | + | chr8_2:2707994-2708013 | Msa1227510:CDS | 55.0% |
| CCTGCATAATGCTCCCAGGA+CGG | - | chr8_2:2708010-2708029 | None:intergenic | 55.0% | |
| GGAAAGGGCCGTCACAACTG+CGG | + | chr8_2:2702352-2702371 | Msa1227510:CDS | 60.0% | |
| ! | GGGATCTGAGGTCGAGAGTG+AGG | + | chr8_2:2702550-2702569 | Msa1227510:intron | 60.0% |
| TGAGGTCGAGAGTGAGGCAG+AGG | + | chr8_2:2702556-2702575 | Msa1227510:intron | 60.0% | |
| GAGGTCGAGAGTGAGGCAGA+GGG | + | chr8_2:2702557-2702576 | Msa1227510:intron | 60.0% | |
| GAGCTGAGGCGTAGCTCAAG+TGG | - | chr8_2:2705453-2705472 | None:intergenic | 60.0% | |
| CCTCCCTCAGGTATCTCGTC+AGG | - | chr8_2:2706647-2706666 | None:intergenic | 60.0% | |
| CCTGACGAGATACCTGAGGG+AGG | + | chr8_2:2706644-2706663 | Msa1227510:CDS | 60.0% | |
| ACTCACGGAGCCAGTCGTCT+AGG | + | chr8_2:2707580-2707599 | Msa1227510:intron | 60.0% | |
| GGAGCCAGTCGTCTAGGTCA+AGG | + | chr8_2:2707586-2707605 | Msa1227510:intron | 60.0% | |
| AGCCCCTTGACCTAGACGAC+TGG | - | chr8_2:2707593-2707612 | None:intergenic | 60.0% | |
| ! | GATGATCTTGGTGGCCGTCC+TGG | + | chr8_2:2707993-2708012 | Msa1227510:CDS | 60.0% |
| !! | CCGTCCTGGGAGCATTATGC+AGG | + | chr8_2:2708007-2708026 | Msa1227510:CDS | 60.0% |
| AGGGGAGAAACGGGAACGGG+AGG | + | chr8_2:2702313-2702332 | Msa1227510:CDS | 65.0% | |
| !! | GAAAAACAGCGGCGCCGGTG+AGG | + | chr8_2:2702376-2702395 | Msa1227510:CDS | 65.0% |
| GGCAGCCGCGGCAAATGTCT+GGG | - | chr8_2:2705686-2705705 | None:intergenic | 65.0% | |
| ! | GTGTGAGGCGTTCCTCCCTC+AGG | - | chr8_2:2706659-2706678 | None:intergenic | 65.0% |
| GCGGCGAAAAACAGCGGCGC+CGG | + | chr8_2:2702371-2702390 | Msa1227510:CDS | 70.0% | |
| GGGCAGCCGCGGCAAATGTC+TGG | - | chr8_2:2705687-2705706 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 2702113 | 2708864 | 2702113 | ID=Msa1227510;Name=Msa1227510 |
| chr8_2 | mRNA | 2702113 | 2708864 | 2702113 | ID=Msa1227510-mRNA-1;Parent=Msa1227510;Name=Msa1227510-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0.36|0.16|1|0.81|0.66|12|267|374 |
| chr8_2 | exon | 2702113 | 2702117 | 2702113 | ID=Msa1227510-mRNA-1:exon:743;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2702301 | 2702402 | 2702301 | ID=Msa1227510-mRNA-1:exon:744;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2704354 | 2704437 | 2704354 | ID=Msa1227510-mRNA-1:exon:745;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2704880 | 2705029 | 2704880 | ID=Msa1227510-mRNA-1:exon:746;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2705116 | 2705236 | 2705116 | ID=Msa1227510-mRNA-1:exon:747;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2705550 | 2705735 | 2705550 | ID=Msa1227510-mRNA-1:exon:748;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2706638 | 2706739 | 2706638 | ID=Msa1227510-mRNA-1:exon:749;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2706822 | 2706828 | 2706822 | ID=Msa1227510-mRNA-1:exon:750;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2707294 | 2707379 | 2707294 | ID=Msa1227510-mRNA-1:exon:751;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2707909 | 2708028 | 2707909 | ID=Msa1227510-mRNA-1:exon:752;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2708147 | 2708253 | 2708147 | ID=Msa1227510-mRNA-1:exon:753;Parent=Msa1227510-mRNA-1 |
| chr8_2 | exon | 2708543 | 2708864 | 2708543 | ID=Msa1227510-mRNA-1:exon:754;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2702113 | 2702117 | 2702113 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2702301 | 2702402 | 2702301 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2704354 | 2704437 | 2704354 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2704880 | 2705029 | 2704880 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2705116 | 2705236 | 2705116 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2705550 | 2705735 | 2705550 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2706638 | 2706739 | 2706638 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2706822 | 2706828 | 2706822 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2707294 | 2707379 | 2707294 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2707909 | 2708028 | 2707909 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2708147 | 2708253 | 2708147 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | CDS | 2708543 | 2708597 | 2708543 | ID=Msa1227510-mRNA-1:cds;Parent=Msa1227510-mRNA-1 |
| chr8_2 | three_prime_UTR | 2708598 | 2708864 | 2708598 | ID=Msa1227510-mRNA-1:three_prime_utr;Parent=Msa1227510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
