Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0230060 | XP_039689914.1 | 92.996 | 514 | 13 | 3 | 9 | 499 | 471 | 984 | 0.0 | 961 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0230060 | sp|Q7ZZ25|ATD1A_DANRE | 47.162 | 229 | 120 | 1 | 243 | 471 | 97 | 324 | 4.21e-70 | 231 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0230060 | A0A396I9Z4 | 92.996 | 514 | 13 | 3 | 9 | 499 | 471 | 984 | 0.0 | 961 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0230060 | Msa0395870 | 0.819181 | 1.329005e-52 | -8.615850e-47 |
Msa0230060 | Msa0863800 | 0.800272 | 1.558188e-48 | -8.615850e-47 |
Msa0230060 | Msa1037700 | -0.816617 | 5.042962e-52 | -8.615850e-47 |
Msa0230060 | Msa1151000 | 0.801299 | 9.613845e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0230060 | MtrunA17_Chr4g0038101 | 92.996 | 514 | 13 | 3 | 9 | 499 | 471 | 984 | 0.0 | 961 |
Msa0230060 | MtrunA17_Chr1g0195741 | 43.154 | 482 | 233 | 6 | 50 | 491 | 723 | 1203 | 1.08e-119 | 380 |
Msa0230060 | MtrunA17_Chr1g0195731 | 45.783 | 415 | 191 | 3 | 111 | 491 | 785 | 1199 | 8.95e-119 | 377 |
Msa0230060 | MtrunA17_Chr3g0116131 | 41.803 | 488 | 235 | 13 | 9 | 460 | 651 | 1125 | 2.20e-113 | 362 |
Msa0230060 | MtrunA17_Chr8g0387641 | 55.124 | 283 | 93 | 2 | 244 | 493 | 528 | 809 | 1.21e-101 | 323 |
Msa0230060 | MtrunA17_Chr5g0397121 | 58.456 | 272 | 90 | 3 | 244 | 493 | 520 | 790 | 1.75e-101 | 323 |
Msa0230060 | MtrunA17_Chr1g0202381 | 38.829 | 461 | 209 | 5 | 105 | 493 | 287 | 746 | 4.01e-98 | 313 |
Msa0230060 | MtrunA17_Chr6g0462581 | 55.720 | 271 | 97 | 3 | 244 | 493 | 507 | 775 | 7.00e-98 | 313 |
Msa0230060 | MtrunA17_Chr1g0202371 | 39.041 | 438 | 205 | 7 | 108 | 492 | 245 | 673 | 1.64e-95 | 304 |
Msa0230060 | MtrunA17_Chr1g0204031 | 53.114 | 273 | 104 | 3 | 244 | 493 | 564 | 835 | 2.70e-88 | 289 |
Msa0230060 | MtrunA17_Chr3g0127401 | 51.600 | 250 | 117 | 2 | 244 | 493 | 88 | 333 | 1.73e-82 | 261 |
Msa0230060 | MtrunA17_Chr3g0127431 | 51.200 | 250 | 118 | 2 | 244 | 493 | 91 | 336 | 2.79e-81 | 258 |
Msa0230060 | MtrunA17_Chr6g0459561 | 45.161 | 248 | 130 | 4 | 243 | 488 | 388 | 631 | 9.92e-62 | 213 |
Msa0230060 | MtrunA17_Chr4g0052271 | 43.725 | 247 | 130 | 5 | 225 | 467 | 106 | 347 | 5.03e-61 | 205 |
Msa0230060 | MtrunA17_Chr7g0246111 | 48.198 | 222 | 111 | 3 | 244 | 464 | 219 | 437 | 1.34e-60 | 207 |
Msa0230060 | MtrunA17_Chr4g0004121 | 44.796 | 221 | 114 | 2 | 243 | 457 | 248 | 466 | 3.05e-60 | 206 |
Msa0230060 | MtrunA17_Chr6g0459541 | 41.577 | 279 | 120 | 7 | 243 | 488 | 48 | 316 | 9.39e-60 | 200 |
Msa0230060 | MtrunA17_Chr2g0321241 | 47.442 | 215 | 104 | 5 | 243 | 454 | 138 | 346 | 6.93e-59 | 201 |
Msa0230060 | MtrunA17_Chr4g0026631 | 45.089 | 224 | 115 | 4 | 243 | 463 | 133 | 351 | 2.15e-57 | 196 |
Msa0230060 | MtrunA17_Chr6g0459551 | 37.544 | 285 | 127 | 7 | 244 | 491 | 109 | 379 | 1.83e-49 | 175 |
Msa0230060 | MtrunA17_Chr1g0180791 | 38.492 | 252 | 146 | 5 | 244 | 489 | 485 | 733 | 1.08e-45 | 171 |
Msa0230060 | MtrunA17_Chr1g0180791 | 38.462 | 247 | 141 | 6 | 225 | 466 | 192 | 432 | 1.77e-42 | 161 |
Msa0230060 | MtrunA17_Chr7g0264521 | 40.171 | 234 | 131 | 5 | 244 | 471 | 486 | 716 | 3.60e-45 | 169 |
Msa0230060 | MtrunA17_Chr7g0264521 | 35.971 | 278 | 167 | 6 | 225 | 497 | 193 | 464 | 1.68e-43 | 164 |
Msa0230060 | MtrunA17_Chr2g0327121 | 39.407 | 236 | 132 | 5 | 244 | 471 | 487 | 719 | 3.56e-44 | 166 |
Msa0230060 | MtrunA17_Chr2g0327121 | 38.057 | 247 | 142 | 6 | 225 | 466 | 194 | 434 | 1.86e-41 | 158 |
Msa0230060 | MtrunA17_Chr6g0459531 | 38.113 | 265 | 118 | 8 | 243 | 498 | 73 | 300 | 8.89e-43 | 154 |
Msa0230060 | MtrunA17_Chr3g0145011 | 37.946 | 224 | 130 | 5 | 244 | 462 | 146 | 365 | 2.06e-42 | 155 |
Msa0230060 | MtrunA17_Chr3g0141901 | 37.500 | 224 | 131 | 5 | 244 | 462 | 143 | 362 | 9.96e-42 | 154 |
Msa0230060 | MtrunA17_Chr1g0192151 | 35.915 | 284 | 154 | 8 | 179 | 457 | 128 | 388 | 1.64e-39 | 148 |
Msa0230060 | MtrunA17_Chr7g0255641 | 38.356 | 219 | 129 | 4 | 248 | 463 | 669 | 884 | 1.71e-39 | 153 |
Msa0230060 | MtrunA17_Chr7g0255641 | 32.787 | 244 | 140 | 12 | 265 | 497 | 416 | 646 | 3.60e-24 | 106 |
Msa0230060 | MtrunA17_Chr4g0014731 | 35.915 | 284 | 154 | 8 | 179 | 457 | 129 | 389 | 2.38e-39 | 147 |
Msa0230060 | MtrunA17_Chr8g0345461 | 31.940 | 335 | 188 | 12 | 146 | 457 | 69 | 386 | 4.55e-39 | 147 |
Msa0230060 | MtrunA17_Chr1g0182711 | 37.443 | 219 | 128 | 5 | 250 | 463 | 201 | 415 | 8.95e-39 | 146 |
Msa0230060 | MtrunA17_Chr7g0255901 | 38.672 | 256 | 142 | 8 | 244 | 490 | 646 | 895 | 1.28e-38 | 150 |
Msa0230060 | MtrunA17_Chr7g0255651 | 38.095 | 231 | 136 | 4 | 244 | 470 | 289 | 516 | 1.87e-38 | 148 |
Msa0230060 | MtrunA17_Chr7g0255651 | 28.063 | 253 | 158 | 9 | 250 | 494 | 30 | 266 | 1.17e-15 | 79.7 |
Msa0230060 | MtrunA17_Chr4g0050561 | 38.356 | 219 | 127 | 4 | 250 | 463 | 169 | 384 | 2.01e-38 | 145 |
Msa0230060 | MtrunA17_Chr7g0255721 | 37.557 | 221 | 132 | 4 | 246 | 463 | 694 | 911 | 2.43e-38 | 149 |
Msa0230060 | MtrunA17_Chr7g0255721 | 33.168 | 202 | 125 | 5 | 275 | 471 | 421 | 617 | 6.75e-26 | 112 |
Msa0230060 | MtrunA17_Chr7g0262801 | 37.443 | 219 | 128 | 5 | 250 | 463 | 200 | 414 | 3.07e-38 | 145 |
Msa0230060 | MtrunA17_Chr1g0200081 | 39.336 | 211 | 118 | 6 | 252 | 457 | 190 | 395 | 2.26e-36 | 139 |
Msa0230060 | MtrunA17_Chr7g0260601 | 41.270 | 189 | 102 | 4 | 276 | 457 | 277 | 463 | 3.95e-36 | 142 |
Msa0230060 | MtrunA17_Chr3g0094871 | 40.957 | 188 | 103 | 4 | 276 | 457 | 48 | 233 | 4.00e-36 | 139 |
Msa0230060 | MtrunA17_Chr8g0362771 | 36.170 | 235 | 144 | 4 | 244 | 476 | 244 | 474 | 5.75e-36 | 142 |
Msa0230060 | MtrunA17_Chr7g0248361 | 38.813 | 219 | 123 | 6 | 246 | 457 | 201 | 415 | 6.39e-36 | 141 |
Msa0230060 | MtrunA17_Chr7g0217421 | 33.212 | 274 | 160 | 8 | 243 | 500 | 45 | 311 | 1.96e-35 | 136 |
Msa0230060 | MtrunA17_Chr3g0143721 | 36.078 | 255 | 142 | 8 | 228 | 468 | 237 | 484 | 3.48e-35 | 139 |
Msa0230060 | MtrunA17_Chr4g0052411 | 37.555 | 229 | 128 | 6 | 238 | 457 | 227 | 449 | 4.38e-35 | 139 |
Msa0230060 | MtrunA17_Chr2g0297281 | 37.555 | 229 | 128 | 6 | 238 | 457 | 284 | 506 | 1.46e-34 | 137 |
Msa0230060 | MtrunA17_Chr4g0043381 | 34.000 | 250 | 152 | 6 | 244 | 490 | 844 | 1083 | 4.09e-34 | 137 |
Msa0230060 | MtrunA17_Chr3g0135721 | 38.356 | 219 | 129 | 4 | 247 | 463 | 233 | 447 | 4.79e-34 | 136 |
Msa0230060 | MtrunA17_Chr3g0135761 | 38.356 | 219 | 129 | 4 | 247 | 463 | 231 | 445 | 1.00e-33 | 135 |
Msa0230060 | MtrunA17_Chr4g0031821 | 36.444 | 225 | 126 | 7 | 243 | 457 | 326 | 543 | 1.14e-33 | 135 |
Msa0230060 | MtrunA17_Chr6g0476861 | 40.212 | 189 | 104 | 4 | 276 | 457 | 234 | 420 | 2.07e-33 | 134 |
Msa0230060 | MtrunA17_Chr2g0331161 | 32.197 | 264 | 140 | 8 | 243 | 494 | 421 | 657 | 4.15e-32 | 130 |
Msa0230060 | MtrunA17_Chr6g0456351 | 40.323 | 186 | 104 | 4 | 276 | 457 | 354 | 536 | 6.06e-32 | 129 |
Msa0230060 | MtrunA17_Chr5g0432631 | 38.421 | 190 | 112 | 3 | 276 | 463 | 266 | 452 | 6.38e-32 | 130 |
Msa0230060 | MtrunA17_Chr7g0255691 | 38.785 | 214 | 124 | 4 | 244 | 453 | 293 | 503 | 6.79e-32 | 129 |
Msa0230060 | MtrunA17_Chr7g0255691 | 31.140 | 228 | 136 | 9 | 276 | 494 | 55 | 270 | 1.27e-22 | 101 |
Msa0230060 | MtrunA17_Chr3g0086411 | 33.725 | 255 | 142 | 7 | 244 | 477 | 222 | 470 | 1.15e-31 | 127 |
Msa0230060 | MtrunA17_Chr3g0086411 | 31.410 | 156 | 99 | 4 | 326 | 473 | 7 | 162 | 6.89e-12 | 67.8 |
Msa0230060 | MtrunA17_Chr5g0429571 | 34.959 | 246 | 149 | 6 | 219 | 457 | 295 | 536 | 1.78e-31 | 129 |
Msa0230060 | MtrunA17_Chr2g0327231 | 42.675 | 157 | 85 | 3 | 244 | 398 | 353 | 506 | 2.30e-31 | 126 |
Msa0230060 | MtrunA17_Chr1g0158881 | 35.833 | 240 | 139 | 6 | 230 | 467 | 329 | 555 | 5.22e-31 | 127 |
Msa0230060 | MtrunA17_Chr2g0316851 | 31.186 | 295 | 164 | 10 | 211 | 482 | 571 | 849 | 1.34e-30 | 126 |
Msa0230060 | MtrunA17_Chr8g0357301 | 36.123 | 227 | 127 | 7 | 247 | 462 | 480 | 699 | 1.35e-30 | 126 |
Msa0230060 | MtrunA17_Chr2g0277831 | 33.755 | 237 | 149 | 5 | 239 | 469 | 242 | 476 | 1.95e-30 | 125 |
Msa0230060 | MtrunA17_Chr2g0277831 | 32.743 | 226 | 144 | 5 | 244 | 465 | 540 | 761 | 2.92e-30 | 125 |
Msa0230060 | MtrunA17_Chr3g0104211 | 36.486 | 222 | 130 | 6 | 243 | 457 | 310 | 527 | 2.50e-30 | 125 |
Msa0230060 | MtrunA17_Chr2g0289231 | 31.687 | 243 | 146 | 6 | 243 | 474 | 303 | 536 | 3.91e-30 | 124 |
Msa0230060 | MtrunA17_Chr4g0033451 | 37.281 | 228 | 131 | 6 | 244 | 463 | 387 | 610 | 4.16e-29 | 122 |
Msa0230060 | MtrunA17_Chr3g0108321 | 39.521 | 167 | 94 | 4 | 249 | 411 | 171 | 334 | 1.66e-28 | 116 |
Msa0230060 | MtrunA17_Chr3g0129971 | 36.364 | 220 | 128 | 6 | 242 | 452 | 301 | 517 | 8.91e-28 | 117 |
Msa0230060 | MtrunA17_Chr5g0432641 | 34.685 | 222 | 138 | 5 | 247 | 466 | 201 | 417 | 1.39e-27 | 116 |
Msa0230060 | MtrunA17_Chr3g0086401 | 35.912 | 181 | 110 | 4 | 244 | 422 | 392 | 568 | 3.03e-25 | 109 |
Msa0230060 | MtrunA17_Chr3g0086401 | 31.950 | 241 | 143 | 9 | 247 | 472 | 101 | 335 | 9.93e-21 | 95.9 |
Msa0230060 | MtrunA17_Chr8g0388371 | 33.476 | 233 | 139 | 6 | 243 | 463 | 410 | 638 | 1.01e-24 | 108 |
Msa0230060 | MtrunA17_Chr3g0135781 | 37.179 | 156 | 93 | 4 | 244 | 399 | 62 | 212 | 2.36e-23 | 98.2 |
Msa0230060 | MtrunA17_Chr4g0047411 | 32.917 | 240 | 133 | 10 | 272 | 491 | 210 | 441 | 3.48e-21 | 97.4 |
Msa0230060 | MtrunA17_Chr1g0168321 | 35.032 | 157 | 93 | 4 | 308 | 457 | 196 | 350 | 4.16e-20 | 93.2 |
Msa0230060 | MtrunA17_Chr1g0204051 | 52.632 | 76 | 35 | 1 | 367 | 442 | 1 | 75 | 1.41e-19 | 83.2 |
Msa0230060 | MtrunA17_Chr6g0450161 | 34.615 | 156 | 90 | 6 | 274 | 425 | 362 | 509 | 3.59e-17 | 84.3 |
Msa0230060 | MtrunA17_Chr3g0116941 | 35.000 | 160 | 85 | 4 | 278 | 420 | 199 | 356 | 3.09e-16 | 81.3 |
Msa0230060 | MtrunA17_Chr4g0039781 | 33.117 | 154 | 95 | 4 | 274 | 425 | 368 | 515 | 4.30e-16 | 81.3 |
Msa0230060 | MtrunA17_Chr5g0404291 | 30.415 | 217 | 114 | 9 | 274 | 460 | 387 | 596 | 8.85e-16 | 80.1 |
Msa0230060 | MtrunA17_Chr1g0190401 | 30.964 | 197 | 118 | 9 | 242 | 429 | 682 | 869 | 2.11e-14 | 76.3 |
Msa0230060 | MtrunA17_Chr4g0062081 | 42.254 | 71 | 39 | 2 | 249 | 318 | 19 | 88 | 2.29e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0230060 | AT1G50140.2 | 71.598 | 507 | 122 | 2 | 9 | 493 | 439 | 945 | 0.0 | 746 |
Msa0230060 | AT1G50140.5 | 71.598 | 507 | 122 | 2 | 9 | 493 | 439 | 945 | 0.0 | 746 |
Msa0230060 | AT1G50140.3 | 71.598 | 507 | 122 | 2 | 9 | 493 | 461 | 967 | 0.0 | 746 |
Msa0230060 | AT1G50140.1 | 71.598 | 507 | 122 | 2 | 9 | 493 | 461 | 967 | 0.0 | 746 |
Msa0230060 | AT1G50140.4 | 71.598 | 507 | 122 | 2 | 9 | 493 | 461 | 967 | 0.0 | 746 |
Msa0230060 | AT3G19740.1 | 71.992 | 507 | 120 | 2 | 9 | 493 | 451 | 957 | 0.0 | 743 |
Msa0230060 | AT1G02890.1 | 41.165 | 515 | 253 | 8 | 19 | 491 | 700 | 1206 | 5.50e-122 | 386 |
Msa0230060 | AT4G02480.1 | 48.148 | 378 | 173 | 2 | 111 | 465 | 811 | 1188 | 1.21e-115 | 369 |
Msa0230060 | AT4G24860.4 | 40.613 | 522 | 242 | 11 | 9 | 491 | 563 | 1055 | 6.28e-115 | 364 |
Msa0230060 | AT4G24860.3 | 40.805 | 522 | 239 | 11 | 9 | 491 | 590 | 1080 | 7.88e-115 | 365 |
Msa0230060 | AT4G24860.2 | 40.613 | 522 | 242 | 11 | 9 | 491 | 586 | 1078 | 1.31e-114 | 364 |
Msa0230060 | AT4G24860.1 | 40.613 | 522 | 242 | 11 | 9 | 491 | 590 | 1082 | 1.39e-114 | 364 |
Msa0230060 | AT1G64110.1 | 58.582 | 268 | 92 | 2 | 244 | 493 | 520 | 786 | 8.93e-104 | 329 |
Msa0230060 | AT1G64110.5 | 58.582 | 268 | 92 | 2 | 244 | 493 | 523 | 789 | 9.73e-104 | 329 |
Msa0230060 | AT1G64110.3 | 58.582 | 268 | 92 | 2 | 244 | 493 | 523 | 789 | 9.73e-104 | 329 |
Msa0230060 | AT1G64110.2 | 58.582 | 268 | 92 | 2 | 244 | 493 | 525 | 791 | 1.00e-103 | 329 |
Msa0230060 | AT1G64110.4 | 58.582 | 268 | 92 | 2 | 244 | 493 | 525 | 791 | 1.00e-103 | 329 |
Msa0230060 | AT1G02890.2 | 37.476 | 515 | 244 | 9 | 19 | 491 | 700 | 1178 | 2.44e-100 | 327 |
Msa0230060 | AT4G28000.1 | 47.044 | 389 | 160 | 11 | 142 | 493 | 413 | 792 | 3.68e-98 | 314 |
Msa0230060 | AT4G28000.3 | 46.392 | 388 | 166 | 9 | 142 | 493 | 413 | 794 | 5.37e-98 | 313 |
Msa0230060 | AT4G28000.2 | 46.392 | 388 | 166 | 9 | 142 | 493 | 413 | 794 | 1.31e-97 | 313 |
Msa0230060 | AT5G52882.1 | 54.945 | 273 | 98 | 3 | 244 | 493 | 521 | 791 | 1.26e-96 | 310 |
Msa0230060 | AT1G62130.2 | 42.439 | 410 | 190 | 8 | 111 | 491 | 604 | 996 | 9.12e-93 | 304 |
Msa0230060 | AT1G62130.1 | 42.439 | 410 | 190 | 8 | 111 | 491 | 611 | 1003 | 1.45e-92 | 304 |
Msa0230060 | AT5G53540.1 | 52.653 | 245 | 112 | 2 | 244 | 488 | 91 | 331 | 5.15e-85 | 268 |
Msa0230060 | AT4G27680.1 | 54.185 | 227 | 103 | 1 | 244 | 470 | 88 | 313 | 2.10e-82 | 261 |
Msa0230060 | AT2G45500.4 | 49.327 | 223 | 109 | 3 | 243 | 464 | 86 | 305 | 3.73e-65 | 215 |
Msa0230060 | AT2G45500.3 | 49.327 | 223 | 109 | 3 | 243 | 464 | 86 | 305 | 3.73e-65 | 215 |
Msa0230060 | AT2G45500.2 | 49.327 | 223 | 109 | 3 | 243 | 464 | 219 | 438 | 9.55e-64 | 215 |
Msa0230060 | AT2G45500.1 | 49.327 | 223 | 109 | 3 | 243 | 464 | 223 | 442 | 1.08e-63 | 215 |
Msa0230060 | AT2G45500.5 | 49.327 | 223 | 109 | 3 | 243 | 464 | 229 | 448 | 1.56e-63 | 215 |
Msa0230060 | AT2G34560.1 | 45.982 | 224 | 116 | 3 | 244 | 465 | 107 | 327 | 2.65e-61 | 206 |
Msa0230060 | AT2G34560.2 | 45.982 | 224 | 116 | 3 | 244 | 465 | 116 | 336 | 4.14e-61 | 206 |
Msa0230060 | AT1G80350.1 | 44.796 | 221 | 114 | 2 | 243 | 457 | 242 | 460 | 5.99e-60 | 206 |
Msa0230060 | AT3G27120.1 | 46.063 | 254 | 125 | 5 | 243 | 491 | 406 | 652 | 1.41e-59 | 208 |
Msa0230060 | AT2G27600.1 | 46.512 | 215 | 106 | 5 | 243 | 454 | 135 | 343 | 1.30e-56 | 195 |
Msa0230060 | AT5G03340.1 | 40.175 | 229 | 130 | 4 | 244 | 468 | 484 | 709 | 9.96e-46 | 171 |
Msa0230060 | AT5G03340.1 | 35.985 | 264 | 158 | 6 | 225 | 483 | 191 | 448 | 8.94e-42 | 159 |
Msa0230060 | AT3G53230.1 | 40.171 | 234 | 131 | 5 | 244 | 471 | 485 | 715 | 6.31e-45 | 169 |
Msa0230060 | AT3G53230.1 | 38.057 | 247 | 142 | 6 | 225 | 466 | 192 | 432 | 1.89e-42 | 162 |
Msa0230060 | AT3G09840.1 | 39.316 | 234 | 134 | 4 | 244 | 472 | 484 | 714 | 7.81e-44 | 166 |
Msa0230060 | AT3G09840.1 | 35.985 | 264 | 158 | 6 | 225 | 483 | 191 | 448 | 1.03e-41 | 159 |
Msa0230060 | AT5G43010.1 | 38.249 | 217 | 129 | 4 | 244 | 457 | 143 | 357 | 1.74e-41 | 153 |
Msa0230060 | AT1G45000.1 | 37.900 | 219 | 127 | 5 | 244 | 457 | 143 | 357 | 6.84e-41 | 152 |
Msa0230060 | AT3G56690.1 | 39.823 | 226 | 130 | 4 | 247 | 469 | 731 | 953 | 1.27e-40 | 157 |
Msa0230060 | AT3G56690.1 | 35.749 | 207 | 123 | 5 | 272 | 473 | 415 | 616 | 1.61e-32 | 132 |
Msa0230060 | AT3G05530.1 | 36.691 | 278 | 148 | 8 | 185 | 457 | 135 | 389 | 8.51e-40 | 149 |
Msa0230060 | AT4G29040.1 | 37.778 | 225 | 131 | 5 | 244 | 463 | 192 | 412 | 1.73e-39 | 149 |
Msa0230060 | AT1G53750.1 | 32.424 | 330 | 193 | 12 | 146 | 457 | 69 | 386 | 2.95e-39 | 148 |
Msa0230060 | AT1G09100.1 | 36.331 | 278 | 149 | 8 | 185 | 457 | 134 | 388 | 3.90e-39 | 147 |
Msa0230060 | AT5G19990.2 | 38.813 | 219 | 126 | 4 | 250 | 463 | 113 | 328 | 3.92e-39 | 146 |
Msa0230060 | AT5G19990.1 | 38.813 | 219 | 126 | 4 | 250 | 463 | 171 | 386 | 1.03e-38 | 146 |
Msa0230060 | AT5G19990.3 | 38.813 | 219 | 126 | 4 | 250 | 463 | 171 | 386 | 1.03e-38 | 146 |
Msa0230060 | AT5G20000.1 | 38.813 | 219 | 126 | 4 | 250 | 463 | 171 | 386 | 1.11e-38 | 146 |
Msa0230060 | AT2G20140.1 | 37.333 | 225 | 132 | 5 | 244 | 463 | 192 | 412 | 3.13e-38 | 145 |
Msa0230060 | AT1G53780.1 | 30.462 | 325 | 190 | 11 | 154 | 457 | 249 | 558 | 1.57e-36 | 143 |
Msa0230060 | AT1G53780.4 | 30.462 | 325 | 190 | 11 | 154 | 457 | 249 | 558 | 1.57e-36 | 143 |
Msa0230060 | AT1G53780.3 | 30.462 | 325 | 190 | 11 | 154 | 457 | 248 | 557 | 1.65e-36 | 143 |
Msa0230060 | AT1G53780.2 | 30.462 | 325 | 190 | 11 | 154 | 457 | 270 | 579 | 1.66e-36 | 143 |
Msa0230060 | AT1G03000.1 | 37.131 | 237 | 141 | 6 | 244 | 475 | 662 | 895 | 7.74e-36 | 142 |
Msa0230060 | AT5G08470.3 | 33.712 | 264 | 167 | 5 | 223 | 483 | 818 | 1076 | 1.33e-35 | 142 |
Msa0230060 | AT1G50250.1 | 36.078 | 255 | 142 | 8 | 228 | 468 | 247 | 494 | 1.63e-35 | 141 |
Msa0230060 | AT5G08470.1 | 33.712 | 264 | 167 | 5 | 223 | 483 | 827 | 1085 | 1.77e-35 | 141 |
Msa0230060 | AT2G30950.1 | 37.555 | 229 | 128 | 6 | 238 | 457 | 222 | 444 | 2.02e-35 | 140 |
Msa0230060 | AT2G30950.2 | 37.555 | 229 | 128 | 6 | 238 | 457 | 222 | 444 | 2.02e-35 | 140 |
Msa0230060 | AT2G30950.3 | 37.555 | 229 | 128 | 6 | 238 | 457 | 222 | 444 | 2.02e-35 | 140 |
Msa0230060 | AT2G30950.4 | 37.555 | 229 | 128 | 6 | 238 | 457 | 226 | 448 | 2.16e-35 | 140 |
Msa0230060 | AT1G07510.1 | 37.778 | 225 | 123 | 7 | 243 | 457 | 330 | 547 | 1.32e-34 | 138 |
Msa0230060 | AT5G42270.1 | 35.294 | 255 | 144 | 8 | 228 | 468 | 235 | 482 | 1.48e-34 | 138 |
Msa0230060 | AT2G26140.1 | 38.356 | 219 | 129 | 4 | 247 | 463 | 233 | 447 | 2.50e-34 | 137 |
Msa0230060 | AT1G06430.1 | 37.118 | 229 | 129 | 6 | 238 | 457 | 215 | 437 | 6.02e-34 | 136 |
Msa0230060 | AT1G06430.3 | 37.118 | 229 | 129 | 6 | 238 | 457 | 215 | 437 | 6.02e-34 | 136 |
Msa0230060 | AT1G06430.2 | 37.118 | 229 | 129 | 6 | 238 | 457 | 215 | 437 | 6.02e-34 | 136 |
Msa0230060 | AT5G15250.1 | 36.066 | 244 | 136 | 7 | 243 | 479 | 227 | 457 | 6.51e-34 | 136 |
Msa0230060 | AT3G16290.1 | 31.561 | 301 | 159 | 10 | 214 | 494 | 376 | 649 | 9.51e-33 | 133 |
Msa0230060 | AT5G53170.1 | 36.250 | 240 | 138 | 6 | 230 | 467 | 359 | 585 | 9.66e-33 | 133 |
Msa0230060 | AT2G29080.1 | 40.957 | 188 | 103 | 4 | 276 | 457 | 356 | 541 | 2.04e-32 | 132 |
Msa0230060 | AT5G58290.1 | 33.790 | 219 | 138 | 4 | 249 | 463 | 164 | 379 | 3.28e-32 | 128 |
Msa0230060 | AT3G47060.1 | 36.122 | 263 | 140 | 9 | 243 | 496 | 328 | 571 | 4.07e-32 | 131 |
Msa0230060 | AT3G02450.1 | 41.935 | 186 | 101 | 4 | 276 | 457 | 368 | 550 | 5.03e-32 | 130 |
Msa0230060 | AT3G01610.2 | 33.600 | 250 | 148 | 6 | 248 | 481 | 238 | 485 | 7.40e-32 | 130 |
Msa0230060 | AT3G01610.2 | 32.237 | 304 | 183 | 8 | 206 | 494 | 485 | 780 | 2.62e-31 | 129 |
Msa0230060 | AT3G01610.1 | 33.600 | 250 | 148 | 6 | 248 | 481 | 238 | 485 | 8.62e-32 | 130 |
Msa0230060 | AT3G01610.1 | 32.237 | 304 | 183 | 8 | 206 | 494 | 485 | 780 | 2.89e-31 | 128 |
Msa0230060 | AT1G79560.2 | 36.681 | 229 | 125 | 8 | 247 | 463 | 500 | 720 | 1.30e-30 | 127 |
Msa0230060 | AT1G79560.1 | 36.681 | 229 | 125 | 8 | 247 | 463 | 500 | 720 | 1.47e-30 | 126 |
Msa0230060 | AT1G79560.3 | 36.681 | 229 | 125 | 8 | 247 | 463 | 500 | 720 | 1.77e-30 | 126 |
Msa0230060 | AT5G15250.2 | 32.959 | 267 | 136 | 8 | 243 | 479 | 227 | 480 | 4.50e-30 | 123 |
Msa0230060 | AT1G05910.1 | 38.182 | 220 | 124 | 6 | 252 | 463 | 393 | 608 | 8.73e-30 | 124 |
Msa0230060 | AT5G58870.1 | 35.586 | 222 | 132 | 6 | 243 | 457 | 332 | 549 | 2.88e-29 | 122 |
Msa0230060 | AT3G15120.2 | 32.941 | 255 | 155 | 8 | 211 | 457 | 704 | 950 | 5.29e-29 | 122 |
Msa0230060 | AT3G15120.1 | 32.941 | 255 | 155 | 8 | 211 | 457 | 694 | 940 | 5.48e-29 | 122 |
Msa0230060 | AT4G04180.2 | 33.636 | 220 | 124 | 7 | 249 | 456 | 323 | 532 | 1.58e-28 | 119 |
Msa0230060 | AT4G04180.1 | 33.636 | 220 | 124 | 7 | 249 | 456 | 328 | 537 | 1.73e-28 | 119 |
Msa0230060 | AT2G03670.1 | 36.744 | 215 | 128 | 4 | 244 | 453 | 290 | 501 | 1.01e-27 | 117 |
Msa0230060 | AT2G03670.1 | 32.283 | 254 | 149 | 7 | 250 | 496 | 32 | 269 | 1.48e-26 | 114 |
Msa0230060 | AT2G03670.2 | 32.283 | 254 | 149 | 7 | 250 | 496 | 32 | 269 | 3.52e-27 | 114 |
Msa0230060 | AT2G03670.2 | 36.842 | 133 | 80 | 2 | 244 | 373 | 290 | 421 | 4.15e-12 | 68.6 |
Msa0230060 | AT5G64580.1 | 33.735 | 249 | 142 | 8 | 242 | 471 | 318 | 562 | 4.81e-26 | 112 |
Msa0230060 | AT4G23940.1 | 32.075 | 265 | 152 | 8 | 243 | 495 | 433 | 681 | 1.84e-25 | 111 |
Msa0230060 | AT1G45000.2 | 39.850 | 133 | 75 | 3 | 244 | 373 | 143 | 273 | 1.08e-23 | 102 |
Msa0230060 | AT4G04910.1 | 34.653 | 202 | 112 | 8 | 272 | 456 | 247 | 445 | 5.85e-21 | 97.1 |
Msa0230060 | AT5G08470.2 | 38.168 | 131 | 77 | 3 | 244 | 373 | 848 | 975 | 3.82e-19 | 91.7 |
Msa0230060 | AT5G16930.1 | 35.256 | 156 | 89 | 6 | 274 | 425 | 397 | 544 | 7.13e-17 | 84.0 |
Msa0230060 | AT3G03060.1 | 35.897 | 156 | 88 | 6 | 274 | 425 | 385 | 532 | 1.44e-16 | 83.2 |
Msa0230060 | AT4G24710.1 | 34.524 | 168 | 91 | 4 | 270 | 420 | 197 | 362 | 1.26e-15 | 79.7 |
Msa0230060 | AT4G24710.3 | 34.524 | 168 | 91 | 4 | 270 | 420 | 209 | 374 | 1.37e-15 | 79.7 |
Msa0230060 | AT2G18330.1 | 34.247 | 146 | 84 | 6 | 274 | 415 | 384 | 521 | 8.04e-15 | 77.8 |
Msa0230060 | AT3G04340.1 | 31.016 | 187 | 112 | 7 | 242 | 419 | 786 | 964 | 2.62e-14 | 76.6 |
Msa0230060 | AT4G36580.1 | 32.877 | 146 | 86 | 6 | 274 | 415 | 381 | 518 | 2.52e-13 | 72.8 |
Find 127 sgRNAs with CRISPR-Local
Find 431 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTATTAAGGCCCCTTAATT+TGG | 0.160451 | 2_2:-1867111 | Msa0230060:CDS |
TTGAACCATATGAATAAATT+AGG | 0.163584 | 2_2:+1866659 | None:intergenic |
GCTTCTGCCAAATTATTATT+TGG | 0.178959 | 2_2:-1866723 | Msa0230060:three_prime_UTR |
GCACGAAATCATCCAAATTA+AGG | 0.195961 | 2_2:+1867099 | None:intergenic |
ATACACTATAAGAGGTCTTT+TGG | 0.252330 | 2_2:+1873931 | None:intergenic |
ACAAAATCACCATTCGGATT+TGG | 0.256340 | 2_2:-1866887 | Msa0230060:three_prime_UTR |
AATCAAAGAATTCTCATTCT+TGG | 0.265372 | 2_2:-1868627 | Msa0230060:CDS |
CAAAATCACCATTCGGATTT+GGG | 0.271853 | 2_2:-1866886 | Msa0230060:three_prime_UTR |
ATTCATGCTTGTTGCATCAT+AGG | 0.291492 | 2_2:+1866955 | None:intergenic |
GAGGATACCAAATAATAATT+TGG | 0.293539 | 2_2:+1866716 | None:intergenic |
ATACTACAACTTCGGTATTA+AGG | 0.303318 | 2_2:-1867124 | Msa0230060:CDS |
GAGATGTTTGACCGATTATA+TGG | 0.306360 | 2_2:-1873833 | Msa0230060:CDS |
TAGGAATATATGTTAACAAT+AGG | 0.333918 | 2_2:-1866544 | Msa0230060:three_prime_UTR |
TGAACCATATGAATAAATTA+GGG | 0.337074 | 2_2:+1866660 | None:intergenic |
TCGAAATTACCTTTGAAGTA+AGG | 0.339195 | 2_2:+1870601 | None:intergenic |
AATCTTTCTCCTTTGATAGA+AGG | 0.340200 | 2_2:+1871280 | None:intergenic |
AGATGTTAAGAAGGCACTTC+AGG | 0.355667 | 2_2:-1870886 | Msa0230060:CDS |
AATGACAGGTGCAAGCTTGC+TGG | 0.358737 | 2_2:+1869360 | None:intergenic |
ATTCCCCTAATTTATTCATA+TGG | 0.359832 | 2_2:-1866664 | Msa0230060:three_prime_UTR |
AATCTTACAGTTTACCTTCT+GGG | 0.372171 | 2_2:+1868555 | None:intergenic |
GGGCAAAACAAAGTTCATTC+AGG | 0.374612 | 2_2:-1873791 | Msa0230060:CDS |
TTAGCAACACGTCCAAAGTT+TGG | 0.383523 | 2_2:+1873611 | None:intergenic |
CGAAATTACCTTTGAAGTAA+GGG | 0.392855 | 2_2:+1870602 | None:intergenic |
CACGAAATCATCCAAATTAA+GGG | 0.392966 | 2_2:+1867100 | None:intergenic |
CTCTCATGGAAACTTGTTGC+GGG | 0.396713 | 2_2:-1870826 | Msa0230060:intron |
TTCATTCGATTCTCCACGTC+TGG | 0.403739 | 2_2:+1867695 | None:intergenic |
TGGAACTGGGAAAACCCTTC+TGG | 0.408116 | 2_2:-1870679 | Msa0230060:CDS |
CTTTGGACGTGTTGCTAAGC+TGG | 0.411161 | 2_2:-1873606 | Msa0230060:intron |
TACAAAACAATTACCTTTGG+TGG | 0.411879 | 2_2:+1872713 | None:intergenic |
TAATTTATTCATATGGTTCA+AGG | 0.423567 | 2_2:-1866657 | Msa0230060:three_prime_UTR |
AACTCATTTCGGTTTGACTT+AGG | 0.429303 | 2_2:+1873872 | None:intergenic |
ATATTCCTACACAAAATTAG+AGG | 0.435818 | 2_2:+1866558 | None:intergenic |
AAGGCACTTGCAACAGAAGC+TGG | 0.437873 | 2_2:-1870654 | Msa0230060:CDS |
AGGAATATATGTTAACAATA+GGG | 0.439447 | 2_2:-1866543 | Msa0230060:three_prime_UTR |
CGTAGGTAGACAGTTTGCTT+GGG | 0.440978 | 2_2:-1868737 | Msa0230060:intron |
CTCCTTTGATAGAAGGAAGC+AGG | 0.442564 | 2_2:+1871287 | None:intergenic |
CAACAAGCATGAATGAGTTA+AGG | 0.442881 | 2_2:-1866946 | Msa0230060:three_prime_UTR |
ATACTCTGGCAGTGATTTGA+AGG | 0.450252 | 2_2:-1867594 | Msa0230060:intron |
ATACTACAGGGCCATATAAT+CGG | 0.451404 | 2_2:+1873822 | None:intergenic |
AAAAGCTCAGGTCTTCTCAT+TGG | 0.451954 | 2_2:+1870849 | None:intergenic |
ACAATGATACTTCCAAACTT+TGG | 0.452480 | 2_2:-1873623 | Msa0230060:CDS |
AAGAATGAGGAATGAGTTCA+TGG | 0.458478 | 2_2:-1868679 | Msa0230060:CDS |
AAGCTGAGAAACTGGTAGGC+TGG | 0.459716 | 2_2:-1871336 | Msa0230060:CDS |
TGCCCACAAATCAATACTAC+AGG | 0.460822 | 2_2:+1873809 | None:intergenic |
TCTTCTAAGAGCTCTTGAAC+AGG | 0.465863 | 2_2:+1867345 | None:intergenic |
AGCTGAGAAACTGGTAGGCT+GGG | 0.467317 | 2_2:-1871335 | Msa0230060:CDS |
TCTTTGCTGATACAGTGGTT+TGG | 0.470083 | 2_2:-1869421 | Msa0230060:intron |
CTCATTCCTCATTCTTCTAG+TGG | 0.473932 | 2_2:+1868686 | None:intergenic |
CATCTGACTGATGGATTCAA+AGG | 0.474208 | 2_2:-1872797 | Msa0230060:CDS |
ACAGCATCATCAAGGTCAAA+TGG | 0.475341 | 2_2:+1868591 | None:intergenic |
TCTTTGAAGCATCTGACTGA+TGG | 0.480093 | 2_2:-1872806 | Msa0230060:CDS |
TTGCAAGTGCCTTCGCCAGA+AGG | 0.481832 | 2_2:+1870664 | None:intergenic |
ATCTGACTGATGGATTCAAA+GGG | 0.485416 | 2_2:-1872796 | Msa0230060:CDS |
GCTCTTAGAAGAAGAAAAGA+AGG | 0.485463 | 2_2:-1867334 | Msa0230060:intron |
GCCCTGTAGTATTGATTTGT+GGG | 0.486437 | 2_2:-1873811 | Msa0230060:CDS |
TCCGGAAAATACACTATAAG+AGG | 0.492473 | 2_2:+1873923 | None:intergenic |
GGCCCTGTAGTATTGATTTG+TGG | 0.494952 | 2_2:-1873812 | Msa0230060:CDS |
CAAAGTTCATTCAGGATCAA+AGG | 0.500044 | 2_2:-1873783 | Msa0230060:CDS |
TGCAACCACTGTGAACTATC+CGG | 0.501647 | 2_2:+1873905 | None:intergenic |
TTGCTATGTATAAGAAGCAT+TGG | 0.503394 | 2_2:+1866825 | None:intergenic |
ATATATTTGTAATGAAATGT+AGG | 0.506901 | 2_2:-1866584 | Msa0230060:three_prime_UTR |
TCGTAGGTAGACAGTTTGCT+TGG | 0.508125 | 2_2:-1868738 | Msa0230060:intron |
TTATTATTTGGTATCCTCGT+TGG | 0.509182 | 2_2:-1866711 | Msa0230060:three_prime_UTR |
GTCAGATGCTTCAAAGAAAG+AGG | 0.514602 | 2_2:+1872812 | None:intergenic |
TCTCTCATGGAAACTTGTTG+CGG | 0.520568 | 2_2:-1870827 | Msa0230060:CDS |
GACAGTTTGCTTGGGGCTCG+AGG | 0.521630 | 2_2:-1868729 | Msa0230060:CDS |
TGGTTCAACCCTTACTTCAA+AGG | 0.523782 | 2_2:-1870610 | Msa0230060:intron |
GGAATATATGTTAACAATAG+GGG | 0.530112 | 2_2:-1866542 | Msa0230060:three_prime_UTR |
AGCTTGACTGAAGGATACTC+TGG | 0.530574 | 2_2:-1867608 | Msa0230060:CDS |
CGCTCTTGAAGATGTTAAGA+AGG | 0.534054 | 2_2:-1870895 | Msa0230060:CDS |
CTTAGTTATAACGATGCCAT+CGG | 0.535949 | 2_2:+1871799 | None:intergenic |
AGTAGAACAAAATCACCATT+CGG | 0.536721 | 2_2:-1866893 | Msa0230060:three_prime_UTR |
GAGTTCATGGCAGCGTGGGA+TGG | 0.540623 | 2_2:-1868666 | Msa0230060:CDS |
TTATTCGTCGTTTACCCAGA+AGG | 0.546828 | 2_2:-1868569 | Msa0230060:intron |
TGGGAAAACCCTTCTGGCGA+AGG | 0.550701 | 2_2:-1870673 | Msa0230060:CDS |
TGGCAGCGTGGGATGGATTG+AGG | 0.551561 | 2_2:-1868659 | Msa0230060:CDS |
GGGGACCGATCTTGAAGGAA+GGG | 0.552719 | 2_2:-1866866 | Msa0230060:three_prime_UTR |
ATTGCAATCTCAAGGATGAA+AGG | 0.555067 | 2_2:-1871145 | Msa0230060:CDS |
TGGGGACCGATCTTGAAGGA+AGG | 0.558408 | 2_2:-1866867 | Msa0230060:three_prime_UTR |
TTTCCATGAGAGAAAAGCTC+AGG | 0.563877 | 2_2:+1870837 | None:intergenic |
TCATCAACAAATATAATGAC+AGG | 0.564710 | 2_2:+1869346 | None:intergenic |
GTCTTGAAATTGCAATCTCA+AGG | 0.568871 | 2_2:-1871153 | Msa0230060:CDS |
GCATGAATGAGTTAAGGAAG+TGG | 0.572557 | 2_2:-1866940 | Msa0230060:three_prime_UTR |
TGCAAGTGCCTTCGCCAGAA+GGG | 0.573201 | 2_2:+1870665 | None:intergenic |
CTCTTGCATGTGAATACCGA+TGG | 0.573397 | 2_2:-1871815 | Msa0230060:CDS |
AGACAATGATACTACAACTT+CGG | 0.575883 | 2_2:-1867132 | Msa0230060:CDS |
TGCCTGCTTCCTTCTATCAA+AGG | 0.576003 | 2_2:-1871289 | Msa0230060:CDS |
TACACAAGTTAACATGGCAA+AGG | 0.581811 | 2_2:-1866798 | Msa0230060:three_prime_UTR |
TCAGAAGCTGAGAAACTGGT+AGG | 0.584938 | 2_2:-1871340 | Msa0230060:intron |
ATGAACCCTTCCTTCAAGAT+CGG | 0.586388 | 2_2:+1866861 | None:intergenic |
GACGAATAACAGCATCATCA+AGG | 0.587329 | 2_2:+1868583 | None:intergenic |
TCATTCAGGATCAAAGGAGA+AGG | 0.588081 | 2_2:-1873777 | Msa0230060:CDS |
AAAAGTAAGATTCCTTTGCA+GGG | 0.589282 | 2_2:+1870711 | None:intergenic |
AGGAAGTGGAATGAAATGTA+TGG | 0.592045 | 2_2:-1866926 | Msa0230060:three_prime_UTR |
GTTGCATCATAGGCAACAGA+TGG | 0.597462 | 2_2:+1866965 | None:intergenic |
AAAATCACCATTCGGATTTG+GGG | 0.601446 | 2_2:-1866885 | Msa0230060:three_prime_UTR |
GATTTGGGGACCGATCTTGA+AGG | 0.602828 | 2_2:-1866871 | Msa0230060:three_prime_UTR |
GTAGGTAGACAGTTTGCTTG+GGG | 0.604063 | 2_2:-1868736 | Msa0230060:intron |
ATATGTTGATTTACCAGACG+TGG | 0.604312 | 2_2:-1867708 | Msa0230060:CDS |
TCTCAGAACCTCAAGGCATG+TGG | 0.604978 | 2_2:-1871097 | Msa0230060:CDS |
AAAATTTACACAAGTTAACA+TGG | 0.611501 | 2_2:-1866804 | Msa0230060:three_prime_UTR |
AGTTTGCTTGGGGCTCGAGG+TGG | 0.617857 | 2_2:-1868726 | Msa0230060:CDS |
ATGAGGCCACTAGAAGAATG+AGG | 0.620118 | 2_2:-1868692 | Msa0230060:CDS |
TAATTTGAATGAACTACGAA+AGG | 0.622627 | 2_2:-1872071 | Msa0230060:intron |
AAAATCTTCTCAGAACCTCA+AGG | 0.626454 | 2_2:-1871104 | Msa0230060:CDS |
GCAGAAGCTGTGAAATGCAG+AGG | 0.627796 | 2_2:+1866738 | None:intergenic |
AAAATAAACCACATGCCTTG+AGG | 0.629539 | 2_2:+1871089 | None:intergenic |
ACGAAATCATCCAAATTAAG+GGG | 0.636641 | 2_2:+1867101 | None:intergenic |
GATTGTGCATACCTCGCGAA+AGG | 0.637078 | 2_2:-1871261 | Msa0230060:intron |
AGGTGGTGCTCATGAGCATG+AGG | 0.641435 | 2_2:-1868709 | Msa0230060:CDS |
TTTGAGTGTACATCCACCAA+AGG | 0.645037 | 2_2:-1872726 | Msa0230060:intron |
TTCGTGCAAGCAAAATCCAT+AGG | 0.648270 | 2_2:-1867083 | Msa0230060:intron |
GAACCATATGAATAAATTAG+GGG | 0.652411 | 2_2:+1866661 | None:intergenic |
CATCATCAAGGTCAAATGGA+CGG | 0.653189 | 2_2:+1868595 | None:intergenic |
AATCTCAAGGATGAAAGGCA+TGG | 0.653221 | 2_2:-1871140 | Msa0230060:CDS |
TGGAATGAAATGTATGGTGA+AGG | 0.657187 | 2_2:-1866920 | Msa0230060:three_prime_UTR |
GAATGAGTTCATGGCAGCGT+GGG | 0.664473 | 2_2:-1868670 | Msa0230060:CDS |
CATCGGTATTCACATGCAAG+AGG | 0.665973 | 2_2:+1871816 | None:intergenic |
GCCCACAAATCAATACTACA+GGG | 0.666475 | 2_2:+1873810 | None:intergenic |
AAACTTGCTAGCTTGACTGA+AGG | 0.670269 | 2_2:-1867617 | Msa0230060:CDS |
GATCGGTCCCCAAATCCGAA+TGG | 0.673216 | 2_2:+1866878 | None:intergenic |
GGAATGAGTTCATGGCAGCG+TGG | 0.676867 | 2_2:-1868671 | Msa0230060:CDS |
CTGACTGATGGATTCAAAGG+GGG | 0.683014 | 2_2:-1872794 | Msa0230060:CDS |
AATGAAATGTATGGTGAAGG+CGG | 0.700198 | 2_2:-1866917 | Msa0230060:three_prime_UTR |
TATATGCTGCAGCGACACAG+AGG | 0.709575 | 2_2:+1867370 | None:intergenic |
TCTGACTGATGGATTCAAAG+GGG | 0.733578 | 2_2:-1872795 | Msa0230060:CDS |
TTACACGTATACCTTTCGCG+AGG | 0.760737 | 2_2:+1871250 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTCTTTATGTAATTAAAA+CGG | - | chr2_2:1868169-1868188 | Msa0230060:intron | 10.0% |
!! | AAAATATATATATTTACCTA+TGG | + | chr2_2:1873421-1873440 | None:intergenic | 10.0% |
!! | ATTTAACCATACAATATTTA+AGG | + | chr2_2:1866940-1866959 | None:intergenic | 15.0% |
!! | ATAAAATTGACAGTAAAAAA+TGG | + | chr2_2:1867337-1867356 | None:intergenic | 15.0% |
!! | AAACTTTAAATGTTTGATAT+TGG | + | chr2_2:1867883-1867902 | None:intergenic | 15.0% |
!!! | TATCAAACATTTAAAGTTTA+AGG | - | chr2_2:1867884-1867903 | Msa0230060:intron | 15.0% |
!! | ATATATTTATGATACATTAC+AGG | - | chr2_2:1868324-1868343 | Msa0230060:intron | 15.0% |
!! | AATATATACAATAGAATGAT+AGG | + | chr2_2:1869263-1869282 | None:intergenic | 15.0% |
!! | TCTATTGTATATATTTATTC+AGG | - | chr2_2:1869268-1869287 | Msa0230060:intron | 15.0% |
!!! | CTTTTATTGCAATTAAAATT+AGG | - | chr2_2:1869937-1869956 | Msa0230060:intron | 15.0% |
!!! | GAAATTGACAATTTTTTTTT+TGG | - | chr2_2:1870114-1870133 | Msa0230060:intron | 15.0% |
!! | ACTTAATCATGTAAATATTA+AGG | + | chr2_2:1870557-1870576 | None:intergenic | 15.0% |
!! | TTAATTCTACTTAAGAAATT+GGG | - | chr2_2:1872080-1872099 | Msa0230060:CDS | 15.0% |
!! | AACATAAATTATCCATATAA+TGG | + | chr2_2:1872276-1872295 | None:intergenic | 15.0% |
!!! | ACATATCATTATAGTAATTT+TGG | + | chr2_2:1872301-1872320 | None:intergenic | 15.0% |
!! | ATATATTTGTAATGAAATGT+AGG | - | chr2_2:1873901-1873920 | Msa0230060:CDS | 15.0% |
!!! | TTGTATGGTTAAATGTTTTT+AGG | - | chr2_2:1866946-1866965 | Msa0230060:three_prime_UTR | 20.0% |
!! | TCACTATTATTCTTAACTAT+AGG | - | chr2_2:1866991-1867010 | Msa0230060:intron | 20.0% |
!! | ACGTAGAATTTATTCATTAT+TGG | - | chr2_2:1867039-1867058 | Msa0230060:intron | 20.0% |
!!! | AGAATTATTGCTATTAGAAA+GGG | + | chr2_2:1867106-1867125 | None:intergenic | 20.0% |
!!! | AAGAATTATTGCTATTAGAA+AGG | + | chr2_2:1867107-1867126 | None:intergenic | 20.0% |
!! | TTTGAAAACAAATTAAGCAA+AGG | + | chr2_2:1867275-1867294 | None:intergenic | 20.0% |
!! | CAATTATAAGAGAAACTATT+AGG | - | chr2_2:1867369-1867388 | Msa0230060:CDS | 20.0% |
!!! | TTTTTATCAAAACCCATATT+TGG | + | chr2_2:1867422-1867441 | None:intergenic | 20.0% |
!! | AAATACAAAACAATTACCTT+TGG | + | chr2_2:1867778-1867797 | None:intergenic | 20.0% |
!!! | ATTTAAAGTTTAAGGATTTC+AGG | - | chr2_2:1867892-1867911 | Msa0230060:intron | 20.0% |
!!! | TTTAAAGTTTAAGGATTTCA+GGG | - | chr2_2:1867893-1867912 | Msa0230060:intron | 20.0% |
!! | GTACAAACAATAACATTAAA+TGG | - | chr2_2:1867935-1867954 | Msa0230060:intron | 20.0% |
!! | TTAAAACGGAAATCATATAT+TGG | - | chr2_2:1868183-1868202 | Msa0230060:intron | 20.0% |
!! | TACATATCAAATTGTACATA+AGG | + | chr2_2:1868268-1868287 | None:intergenic | 20.0% |
!! | CATACTTGACATATATATTT+GGG | + | chr2_2:1868537-1868556 | None:intergenic | 20.0% |
!! | ACATACTTGACATATATATT+TGG | + | chr2_2:1868538-1868557 | None:intergenic | 20.0% |
!! | CTATATATGCTTAATATTGA+TGG | + | chr2_2:1868598-1868617 | None:intergenic | 20.0% |
!! | TACAACATTATTTAGTACAT+TGG | - | chr2_2:1868981-1869000 | Msa0230060:intron | 20.0% |
!! | ACAACATTATTTAGTACATT+GGG | - | chr2_2:1868982-1869001 | Msa0230060:intron | 20.0% |
!! | AAAACAACGTAAGATAAAAA+AGG | + | chr2_2:1869459-1869478 | None:intergenic | 20.0% |
!!! | GTTTTTGATCATACAAAATA+TGG | - | chr2_2:1869474-1869493 | Msa0230060:intron | 20.0% |
!! | TTTGTGTGTATAATAATTTG+AGG | - | chr2_2:1869740-1869759 | Msa0230060:intron | 20.0% |
!!! | ATAAAAGTATCAACTGAAAA+AGG | + | chr2_2:1869924-1869943 | None:intergenic | 20.0% |
!! | AAATAAAGAAGAATATTACG+AGG | + | chr2_2:1870018-1870037 | None:intergenic | 20.0% |
!! | AAGGAAAAATAAAACATAAG+TGG | - | chr2_2:1870202-1870221 | Msa0230060:intron | 20.0% |
!! | AATAACAAATGTAAGAAATG+AGG | - | chr2_2:1870330-1870349 | Msa0230060:intron | 20.0% |
!!! | TTTTCTTGCCAAATATTTTT+AGG | - | chr2_2:1870436-1870455 | Msa0230060:intron | 20.0% |
!! | AATTCATGAAAAAAAAGCAA+AGG | + | chr2_2:1870782-1870801 | None:intergenic | 20.0% |
!! | TATCTGTTAAGAAATGTATT+AGG | - | chr2_2:1870860-1870879 | Msa0230060:CDS | 20.0% |
!! | AGTTCAATAATAATTTAACG+TGG | - | chr2_2:1871351-1871370 | Msa0230060:intron | 20.0% |
!!! | AAAAAAAATCTGAAGTTTAC+TGG | - | chr2_2:1871636-1871655 | Msa0230060:intron | 20.0% |
!! | CAATTTCTTAAGTAGAATTA+AGG | + | chr2_2:1872081-1872100 | None:intergenic | 20.0% |
!! | CTTAATTCTACTTAAGAAAT+TGG | - | chr2_2:1872079-1872098 | Msa0230060:CDS | 20.0% |
!! | TAATTCTACTTAAGAAATTG+GGG | - | chr2_2:1872081-1872100 | Msa0230060:CDS | 20.0% |
!! | AATCAAATTGTTGAATTTGA+AGG | - | chr2_2:1872112-1872131 | Msa0230060:CDS | 20.0% |
!! | AAATAAAATATTTCTTCACC+TGG | - | chr2_2:1872454-1872473 | Msa0230060:intron | 20.0% |
!! | AATAAAATATTTCTTCACCT+GGG | - | chr2_2:1872455-1872474 | Msa0230060:intron | 20.0% |
!! | ATATGTATAAATCTATCCAT+GGG | + | chr2_2:1872577-1872596 | None:intergenic | 20.0% |
!!! | ATTTATTGAATTTTTTCCCT+TGG | + | chr2_2:1872634-1872653 | None:intergenic | 20.0% |
!!! | TTCAAGTTTACATTTACATT+TGG | - | chr2_2:1872696-1872715 | Msa0230060:intron | 20.0% |
!! | TCAAGTTTACATTTACATTT+GGG | - | chr2_2:1872697-1872716 | Msa0230060:intron | 20.0% |
!!! | CAAACATGATACTATTTTTT+TGG | - | chr2_2:1873319-1873338 | Msa0230060:intron | 20.0% |
!! | AAAATTTACACAAGTTAACA+TGG | - | chr2_2:1873681-1873700 | Msa0230060:intron | 20.0% |
!!! | TTTCACTTTACACTTTTAAA+TGG | - | chr2_2:1873724-1873743 | Msa0230060:intron | 20.0% |
!! | TGAACCATATGAATAAATTA+GGG | + | chr2_2:1873828-1873847 | None:intergenic | 20.0% |
!! | TTGAACCATATGAATAAATT+AGG | + | chr2_2:1873829-1873848 | None:intergenic | 20.0% |
!! | TAATTTATTCATATGGTTCA+AGG | - | chr2_2:1873828-1873847 | Msa0230060:CDS | 20.0% |
!! | TAGGAATATATGTTAACAAT+AGG | - | chr2_2:1873941-1873960 | Msa0230060:CDS | 20.0% |
!! | AGGAATATATGTTAACAATA+GGG | - | chr2_2:1873942-1873961 | Msa0230060:CDS | 20.0% |
! | GCATTTCCTTAAATATTGTA+TGG | - | chr2_2:1866931-1866950 | Msa0230060:three_prime_UTR | 25.0% |
!!! | GCTTAATTTGTTTTCAAATC+TGG | - | chr2_2:1867277-1867296 | Msa0230060:intron | 25.0% |
! | TTTCTCTTATAATTGCACTT+GGG | + | chr2_2:1867364-1867383 | None:intergenic | 25.0% |
! | AACTATTAGGAAAGATTTAG+AGG | - | chr2_2:1867382-1867401 | Msa0230060:intron | 25.0% |
! | TAATGAGTTTGATCCAAATA+TGG | - | chr2_2:1867406-1867425 | Msa0230060:intron | 25.0% |
! | AATGAGTTTGATCCAAATAT+GGG | - | chr2_2:1867407-1867426 | Msa0230060:intron | 25.0% |
!!! | TGGGTTTTGATAAAAAACTA+TGG | - | chr2_2:1867426-1867445 | Msa0230060:intron | 25.0% |
!!! | AAAATCGCCATTTTTTTTCT+TGG | - | chr2_2:1867612-1867631 | Msa0230060:CDS | 25.0% |
!!! | AAATCGCCATTTTTTTTCTT+GGG | - | chr2_2:1867613-1867632 | Msa0230060:CDS | 25.0% |
! | TAAGAACCCAAGAAAAAAAA+TGG | + | chr2_2:1867622-1867641 | None:intergenic | 25.0% |
!! | TTGTATTTTGCATCTTCATA+AGG | - | chr2_2:1867790-1867809 | Msa0230060:intron | 25.0% |
! | AACTAACATACTAGAAGATT+TGG | - | chr2_2:1868026-1868045 | Msa0230060:intron | 25.0% |
! | ATATACATACAGATGTACAT+AGG | + | chr2_2:1868052-1868071 | None:intergenic | 25.0% |
!! | AGCATTTTCACAAATTAAAC+TGG | - | chr2_2:1868139-1868158 | Msa0230060:intron | 25.0% |
! | TCTAATAGTTGTTTATGTCA+TGG | - | chr2_2:1868292-1868311 | Msa0230060:intron | 25.0% |
! | TATTTATGATACATTACAGG+AGG | - | chr2_2:1868327-1868346 | Msa0230060:intron | 25.0% |
! | TAATTTGAATGAACTACGAA+AGG | - | chr2_2:1868414-1868433 | Msa0230060:intron | 25.0% |
! | CAATATTAAGCATATATAGC+TGG | - | chr2_2:1868599-1868618 | Msa0230060:CDS | 25.0% |
! | TGTTGAGGAATTACAAAAAT+CGG | - | chr2_2:1868942-1868961 | Msa0230060:intron | 25.0% |
! | TTATTAATGATGCCTATACA+GGG | + | chr2_2:1869066-1869085 | None:intergenic | 25.0% |
! | ATTATTAATGATGCCTATAC+AGG | + | chr2_2:1869067-1869086 | None:intergenic | 25.0% |
!!! | TTCTTTATTTTACCTAGTAC+TGG | - | chr2_2:1870028-1870047 | Msa0230060:intron | 25.0% |
!! | ACCTAGTAAGATGATTTTTA+AGG | - | chr2_2:1870183-1870202 | Msa0230060:intron | 25.0% |
! | TCCTTAAAAATCATCTTACT+AGG | + | chr2_2:1870187-1870206 | None:intergenic | 25.0% |
! | CATCGTATCCTAAAAATATT+TGG | + | chr2_2:1870447-1870466 | None:intergenic | 25.0% |
!!! | AACATGTTTTTTGCATAGTT+AGG | + | chr2_2:1870514-1870533 | None:intergenic | 25.0% |
! | TAACTATGCAAAAAACATGT+TGG | - | chr2_2:1870513-1870532 | Msa0230060:intron | 25.0% |
! | TAATGTATATGAGAATCAGT+TGG | - | chr2_2:1870651-1870670 | Msa0230060:CDS | 25.0% |
! | TCACTTGGTTATAAATAACA+AGG | - | chr2_2:1870978-1870997 | Msa0230060:intron | 25.0% |
! | TCATCAACAAATATAATGAC+AGG | + | chr2_2:1871142-1871161 | None:intergenic | 25.0% |
!! | TTTAAAAGCGACTTTTAGAT+TGG | + | chr2_2:1871553-1871572 | None:intergenic | 25.0% |
!!! | GGAAAGTAGAAACTATTTTT+TGG | + | chr2_2:1871594-1871613 | None:intergenic | 25.0% |
!!! | GATTTTTTTTCCACATTTGA+GGG | + | chr2_2:1871626-1871645 | None:intergenic | 25.0% |
!!! | AGATTTTTTTTCCACATTTG+AGG | + | chr2_2:1871627-1871646 | None:intergenic | 25.0% |
! | AATCAAAGAATTCTCATTCT+TGG | - | chr2_2:1871858-1871877 | Msa0230060:intron | 25.0% |
!! | AAGATTCCTTCTAGAAATAT+TGG | - | chr2_2:1871947-1871966 | Msa0230060:intron | 25.0% |
! | TGAGTTATGATCATTATCTT+TGG | - | chr2_2:1871988-1872007 | Msa0230060:intron | 25.0% |
! | AATTCTACTTAAGAAATTGG+GGG | - | chr2_2:1872082-1872101 | Msa0230060:CDS | 25.0% |
!! | TTCGCTTTCTTATTTACTTA+TGG | + | chr2_2:1872229-1872248 | None:intergenic | 25.0% |
! | ATAAAATATTTCTTCACCTG+GGG | - | chr2_2:1872456-1872475 | Msa0230060:intron | 25.0% |
! | AGCTTAATTTATTCTGATAG+AGG | - | chr2_2:1872551-1872570 | Msa0230060:intron | 25.0% |
! | CATATGTATAAATCTATCCA+TGG | + | chr2_2:1872578-1872597 | None:intergenic | 25.0% |
!! | GATAGAAACCCTTATATTTT+AGG | - | chr2_2:1872935-1872954 | Msa0230060:intron | 25.0% |
! | GAGGATACCAAATAATAATT+TGG | + | chr2_2:1873772-1873791 | None:intergenic | 25.0% |
! | ATTCCCCTAATTTATTCATA+TGG | - | chr2_2:1873821-1873840 | Msa0230060:CDS | 25.0% |
! | GAACCATATGAATAAATTAG+GGG | + | chr2_2:1873827-1873846 | None:intergenic | 25.0% |
! | ATATTCCTACACAAAATTAG+AGG | + | chr2_2:1873930-1873949 | None:intergenic | 25.0% |
! | GGAATATATGTTAACAATAG+GGG | - | chr2_2:1873943-1873962 | Msa0230060:CDS | 25.0% |
! | CAACATAGAAAAAATAGTTG+GGG | + | chr2_2:1873975-1873994 | None:intergenic | 25.0% |
! | CCAACATAGAAAAAATAGTT+GGG | + | chr2_2:1873976-1873995 | None:intergenic | 25.0% |
! | ATACACTATAAGAGGTCTTT+TGG | + | chr2_2:1866557-1866576 | None:intergenic | 30.0% |
! | ACCTCTTATAGTGTATTTTC+CGG | - | chr2_2:1866561-1866580 | Msa0230060:three_prime_UTR | 30.0% |
CCTTGTGAAAAAACTCATTT+CGG | + | chr2_2:1866627-1866646 | None:intergenic | 30.0% | |
ACAATGATACTTCCAAACTT+TGG | - | chr2_2:1866862-1866881 | Msa0230060:three_prime_UTR | 30.0% | |
! | TTGCTATTAGAAAGGGAAAA+AGG | + | chr2_2:1867099-1867118 | None:intergenic | 30.0% |
GTTTCTCTTATAATTGCACT+TGG | + | chr2_2:1867365-1867384 | None:intergenic | 30.0% | |
GAATATGACTAAGAAATCAG+TGG | - | chr2_2:1867561-1867580 | Msa0230060:intron | 30.0% | |
TACAAAACAATTACCTTTGG+TGG | + | chr2_2:1867775-1867794 | None:intergenic | 30.0% | |
!!! | TATTGGTTTTTGAGATGTGT+TGG | + | chr2_2:1867866-1867885 | None:intergenic | 30.0% |
ATTGTTTGTACAGTAGTGAT+GGG | + | chr2_2:1867926-1867945 | None:intergenic | 30.0% | |
TATTGTTTGTACAGTAGTGA+TGG | + | chr2_2:1867927-1867946 | None:intergenic | 30.0% | |
GTTGATTGTCTTTGTATCTA+AGG | - | chr2_2:1868213-1868232 | Msa0230060:intron | 30.0% | |
AGTATTCAAAAAACAACTCG+AGG | - | chr2_2:1868363-1868382 | Msa0230060:intron | 30.0% | |
TTGACATATATATTTGGGAG+GGG | + | chr2_2:1868532-1868551 | None:intergenic | 30.0% | |
CTTGACATATATATTTGGGA+GGG | + | chr2_2:1868533-1868552 | None:intergenic | 30.0% | |
ACTTGACATATATATTTGGG+AGG | + | chr2_2:1868534-1868553 | None:intergenic | 30.0% | |
TAAAAAAAGTTCCCTAAGGA+GGG | - | chr2_2:1868916-1868935 | Msa0230060:intron | 30.0% | |
AATCTTTCTCCTTTGATAGA+AGG | + | chr2_2:1869208-1869227 | None:intergenic | 30.0% | |
AATTTCAAGACTTCACACAA+GGG | + | chr2_2:1869323-1869342 | None:intergenic | 30.0% | |
AAAAGTAAGATTCCTTTGCA+GGG | + | chr2_2:1869777-1869796 | None:intergenic | 30.0% | |
AAAAAGTAAGATTCCTTTGC+AGG | + | chr2_2:1869778-1869797 | None:intergenic | 30.0% | |
!! | TGCAAAGGAATCTTACTTTT+TGG | - | chr2_2:1869777-1869796 | Msa0230060:intron | 30.0% |
! | GCAAATTTTATCAGTGTAAC+TGG | - | chr2_2:1869855-1869874 | Msa0230060:intron | 30.0% |
!! | CGAAATTACCTTTGAAGTAA+GGG | + | chr2_2:1869886-1869905 | None:intergenic | 30.0% |
!! | TCGAAATTACCTTTGAAGTA+AGG | + | chr2_2:1869887-1869906 | None:intergenic | 30.0% |
CTATGAAAGATTTGACCATA+GGG | - | chr2_2:1870586-1870605 | Msa0230060:intron | 30.0% | |
! | GAAATTTTAGACTTCCAAGT+GGG | - | chr2_2:1870608-1870627 | Msa0230060:intron | 30.0% |
! | ACTCTAAGAGAATGTAAAGA+TGG | - | chr2_2:1870695-1870714 | Msa0230060:CDS | 30.0% |
! | CTCTAAGAGAATGTAAAGAT+GGG | - | chr2_2:1870696-1870715 | Msa0230060:CDS | 30.0% |
TCTAAGAGAATGTAAAGATG+GGG | - | chr2_2:1870697-1870716 | Msa0230060:CDS | 30.0% | |
AAACTTGAGTGAAAAGCAAA+TGG | - | chr2_2:1870721-1870740 | Msa0230060:intron | 30.0% | |
AACTTGAGTGAAAAGCAAAT+GGG | - | chr2_2:1870722-1870741 | Msa0230060:intron | 30.0% | |
GAATTGTTCCAGTAGTTTAA+AGG | - | chr2_2:1870810-1870829 | Msa0230060:intron | 30.0% | |
! | GAGTAAATAGCTCTATCATT+AGG | - | chr2_2:1870901-1870920 | Msa0230060:intron | 30.0% |
AGCTAAATTCCTTGATTGTA+GGG | + | chr2_2:1870942-1870961 | None:intergenic | 30.0% | |
TAGATTTGATTGCAATCACT+TGG | - | chr2_2:1870963-1870982 | Msa0230060:intron | 30.0% | |
!! | TTGCTTTTATAAGCATGCAA+TGG | - | chr2_2:1871201-1871220 | Msa0230060:intron | 30.0% |
!!! | GAAATAGACTGTACTTTTTC+TGG | - | chr2_2:1871231-1871250 | Msa0230060:intron | 30.0% |
TAATTTAGAAACAAGCCGAT+TGG | + | chr2_2:1871517-1871536 | None:intergenic | 30.0% | |
TAGTTTCTACTTTCCAGAAA+TGG | - | chr2_2:1871599-1871618 | Msa0230060:intron | 30.0% | |
AAGCGTAGATAAACAAAAGA+AGG | + | chr2_2:1871669-1871688 | None:intergenic | 30.0% | |
AATCTTACAGTTTACCTTCT+GGG | + | chr2_2:1871933-1871952 | None:intergenic | 30.0% | |
! | TTCTAGAAATATTGGCTGAA+GGG | - | chr2_2:1871955-1871974 | Msa0230060:intron | 30.0% |
AGATTACAGTGACCATTATA+TGG | - | chr2_2:1872261-1872280 | Msa0230060:intron | 30.0% | |
TATGCTTCACAAAGAGTAAT+AGG | + | chr2_2:1872333-1872352 | None:intergenic | 30.0% | |
! | TTAATAGCTTTTACAGCCAA+GGG | - | chr2_2:1872615-1872634 | Msa0230060:intron | 30.0% |
AGTTTACATTTACATTTGGG+AGG | - | chr2_2:1872700-1872719 | Msa0230060:intron | 30.0% | |
! | ATGGAGTGCCTAAAATATAA+GGG | + | chr2_2:1872946-1872965 | None:intergenic | 30.0% |
! | AATGGAGTGCCTAAAATATA+AGG | + | chr2_2:1872947-1872966 | None:intergenic | 30.0% |
CTGCAATACATAATATTCTC+TGG | - | chr2_2:1873038-1873057 | Msa0230060:intron | 30.0% | |
TAGAAGAAGAAAAGAAGGTA+CGG | - | chr2_2:1873156-1873175 | Msa0230060:intron | 30.0% | |
AACAAATTCAATTGAAGTGC+CGG | + | chr2_2:1873289-1873308 | None:intergenic | 30.0% | |
! | ATAGTATCATGTTTGTTAGC+AGG | + | chr2_2:1873314-1873333 | None:intergenic | 30.0% |
AGACAATGATACTACAACTT+CGG | - | chr2_2:1873353-1873372 | Msa0230060:intron | 30.0% | |
ATACTACAACTTCGGTATTA+AGG | - | chr2_2:1873361-1873380 | Msa0230060:intron | 30.0% | |
ACGAAATCATCCAAATTAAG+GGG | + | chr2_2:1873387-1873406 | None:intergenic | 30.0% | |
CACGAAATCATCCAAATTAA+GGG | + | chr2_2:1873388-1873407 | None:intergenic | 30.0% | |
ACATTTGGACTACTAAGAAT+AGG | + | chr2_2:1873467-1873486 | None:intergenic | 30.0% | |
TAGTCCAAATGTGAAATAAC+TGG | - | chr2_2:1873475-1873494 | Msa0230060:intron | 30.0% | |
AGTAGAACAAAATCACCATT+CGG | - | chr2_2:1873592-1873611 | Msa0230060:intron | 30.0% | |
! | TTGCTATGTATAAGAAGCAT+TGG | + | chr2_2:1873663-1873682 | None:intergenic | 30.0% |
GCTTCTGCCAAATTATTATT+TGG | - | chr2_2:1873762-1873781 | Msa0230060:intron | 30.0% | |
TTATTATTTGGTATCCTCGT+TGG | - | chr2_2:1873774-1873793 | Msa0230060:CDS | 30.0% | |
!!! | ACTTTCATTCTGTTTTTGCA+CGG | - | chr2_2:1873854-1873873 | Msa0230060:CDS | 30.0% |
!!! | CCCAACTATTTTTTCTATGT+TGG | - | chr2_2:1873973-1873992 | Msa0230060:CDS | 30.0% |
GCCAACATAGAAAAAATAGT+TGG | + | chr2_2:1873977-1873996 | None:intergenic | 30.0% | |
!!! | CACATGTCTATTGCTTTTTC+AGG | - | chr2_2:1866522-1866541 | Msa0230060:three_prime_UTR | 35.0% |
TCCGGAAAATACACTATAAG+AGG | + | chr2_2:1866565-1866584 | None:intergenic | 35.0% | |
! | AACTCATTTCGGTTTGACTT+AGG | + | chr2_2:1866616-1866635 | None:intergenic | 35.0% |
!!! | CCGAAATGAGTTTTTTCACA+AGG | - | chr2_2:1866624-1866643 | Msa0230060:three_prime_UTR | 35.0% |
!!! | TGAGTTTTTTCACAAGGTTG+AGG | - | chr2_2:1866630-1866649 | Msa0230060:three_prime_UTR | 35.0% |
GAGATGTTTGACCGATTATA+TGG | - | chr2_2:1866652-1866671 | Msa0230060:three_prime_UTR | 35.0% | |
ATACTACAGGGCCATATAAT+CGG | + | chr2_2:1866666-1866685 | None:intergenic | 35.0% | |
CAAAGTTCATTCAGGATCAA+AGG | - | chr2_2:1866702-1866721 | Msa0230060:three_prime_UTR | 35.0% | |
! | AAAAAGGTACATTTCCAGGA+CGG | + | chr2_2:1867083-1867102 | None:intergenic | 35.0% |
GATAAAGCAGAGACAACAAT+AGG | + | chr2_2:1867529-1867548 | None:intergenic | 35.0% | |
!! | ATCTGACTGATGGATTCAAA+GGG | - | chr2_2:1867689-1867708 | Msa0230060:CDS | 35.0% |
TTGTTTGTACAGTAGTGATG+GGG | + | chr2_2:1867925-1867944 | None:intergenic | 35.0% | |
TAGCCTATATACACGTATCA+TGG | - | chr2_2:1867961-1867980 | Msa0230060:intron | 35.0% | |
CTTCCATGATACGTGTATAT+AGG | + | chr2_2:1867967-1867986 | None:intergenic | 35.0% | |
TGACATATATATTTGGGAGG+GGG | + | chr2_2:1868531-1868550 | None:intergenic | 35.0% | |
TATGTCAAGTATGTTGACCT+CGG | - | chr2_2:1868544-1868563 | Msa0230060:intron | 35.0% | |
TTCATAGAAAACATACTCCG+AGG | + | chr2_2:1868564-1868583 | None:intergenic | 35.0% | |
CTTAGTTATAACGATGCCAT+CGG | + | chr2_2:1868689-1868708 | None:intergenic | 35.0% | |
CGTACATTGTACAATCAATG+AGG | + | chr2_2:1868786-1868805 | None:intergenic | 35.0% | |
GAGTACCTTCTAACATAAAG+TGG | - | chr2_2:1868805-1868824 | Msa0230060:intron | 35.0% | |
CTCAACCACTTTATGTTAGA+AGG | + | chr2_2:1868813-1868832 | None:intergenic | 35.0% | |
! | GTTGTTAGAGTGTTATGTTG+TGG | + | chr2_2:1868883-1868902 | None:intergenic | 35.0% |
!!! | CCTTAGGGAACTTTTTTTAG+AGG | + | chr2_2:1868915-1868934 | None:intergenic | 35.0% |
! | CCTCTAAAAAAAGTTCCCTA+AGG | - | chr2_2:1868912-1868931 | Msa0230060:intron | 35.0% |
CTAAAAAAAGTTCCCTAAGG+AGG | - | chr2_2:1868915-1868934 | Msa0230060:intron | 35.0% | |
AAACACATGAAGTTCGATCA+TGG | + | chr2_2:1869092-1869111 | None:intergenic | 35.0% | |
CAATTTCAAGACTTCACACA+AGG | + | chr2_2:1869324-1869343 | None:intergenic | 35.0% | |
GTCTTGAAATTGCAATCTCA+AGG | - | chr2_2:1869332-1869351 | Msa0230060:intron | 35.0% | |
ATTGCAATCTCAAGGATGAA+AGG | - | chr2_2:1869340-1869359 | Msa0230060:intron | 35.0% | |
AAAATCTTCTCAGAACCTCA+AGG | - | chr2_2:1869381-1869400 | Msa0230060:CDS | 35.0% | |
AAAATAAACCACATGCCTTG+AGG | + | chr2_2:1869399-1869418 | None:intergenic | 35.0% | |
CAGAATGCATACAAGAAACA+AGG | + | chr2_2:1869692-1869711 | None:intergenic | 35.0% | |
TTCCATATCCACATCATTCA+CGG | + | chr2_2:1870057-1870076 | None:intergenic | 35.0% | |
!!! | CAATTTTTTTTTTGGCTCGC+TGG | - | chr2_2:1870122-1870141 | Msa0230060:intron | 35.0% |
AAGGAATGTGAAGCTTTCAA+AGG | + | chr2_2:1870358-1870377 | None:intergenic | 35.0% | |
TCCTTTCTAACCAAATACAC+CGG | - | chr2_2:1870373-1870392 | Msa0230060:intron | 35.0% | |
!! | TACTGTTTTAAGCAGTTCTC+CGG | + | chr2_2:1870395-1870414 | None:intergenic | 35.0% |
AGGAAGCTAAGATCTTATGA+AGG | + | chr2_2:1870494-1870513 | None:intergenic | 35.0% | |
CCTATGGTCAAATCTTTCAT+AGG | + | chr2_2:1870588-1870607 | None:intergenic | 35.0% | |
CCTATGAAAGATTTGACCAT+AGG | - | chr2_2:1870585-1870604 | Msa0230060:intron | 35.0% | |
! | GGAAGTCTAAAATTTCCCTA+TGG | + | chr2_2:1870604-1870623 | None:intergenic | 35.0% |
! | GGAAATTTTAGACTTCCAAG+TGG | - | chr2_2:1870607-1870626 | Msa0230060:intron | 35.0% |
AGCTCTATCATTAGGTTTGT+TGG | - | chr2_2:1870909-1870928 | Msa0230060:intron | 35.0% | |
! | GCTCTATCATTAGGTTTGTT+GGG | - | chr2_2:1870910-1870929 | Msa0230060:intron | 35.0% |
CAGCTAAATTCCTTGATTGT+AGG | + | chr2_2:1870943-1870962 | None:intergenic | 35.0% | |
! | TTGTTTCTTTGCTGATACAG+TGG | - | chr2_2:1871059-1871078 | Msa0230060:intron | 35.0% |
ATTAATCGCTTGAACTGACA+TGG | + | chr2_2:1871393-1871412 | None:intergenic | 35.0% | |
CTGACTAGAATCTATATCGT+AGG | - | chr2_2:1871731-1871750 | Msa0230060:intron | 35.0% | |
AAGAATGAGGAATGAGTTCA+TGG | - | chr2_2:1871806-1871825 | Msa0230060:CDS | 35.0% | |
GAATCTTACAGTTTACCTTC+TGG | + | chr2_2:1871934-1871953 | None:intergenic | 35.0% | |
!! | CTTCAGCCAATATTTCTAGA+AGG | + | chr2_2:1871956-1871975 | None:intergenic | 35.0% |
! | CTTCTAGAAATATTGGCTGA+AGG | - | chr2_2:1871954-1871973 | Msa0230060:intron | 35.0% |
! | GTTAATAGCTTTTACAGCCA+AGG | - | chr2_2:1872614-1872633 | Msa0230060:intron | 35.0% |
!! | ATATGTTGATTTACCAGACG+TGG | - | chr2_2:1872777-1872796 | Msa0230060:CDS | 35.0% |
ATGAGATATATGACTGGAGA+CGG | + | chr2_2:1873068-1873087 | None:intergenic | 35.0% | |
!! | TGCTGCTTTGTGCTTATATT+TGG | - | chr2_2:1873087-1873106 | Msa0230060:intron | 35.0% |
GCTCTTAGAAGAAGAAAAGA+AGG | - | chr2_2:1873151-1873170 | Msa0230060:intron | 35.0% | |
! | AGAAGAAGAAAAGAAGGTAC+GGG | - | chr2_2:1873157-1873176 | Msa0230060:intron | 35.0% |
! | CCAATACACAAAACTTGCTT+CGG | - | chr2_2:1873219-1873238 | Msa0230060:intron | 35.0% |
! | ACAAATTCAATTGAAGTGCC+GGG | + | chr2_2:1873288-1873307 | None:intergenic | 35.0% |
GCACGAAATCATCCAAATTA+AGG | + | chr2_2:1873389-1873408 | None:intergenic | 35.0% | |
! | ATTCATGCTTGTTGCATCAT+AGG | + | chr2_2:1873533-1873552 | None:intergenic | 35.0% |
CAACAAGCATGAATGAGTTA+AGG | - | chr2_2:1873539-1873558 | Msa0230060:intron | 35.0% | |
AGGAAGTGGAATGAAATGTA+TGG | - | chr2_2:1873559-1873578 | Msa0230060:intron | 35.0% | |
TGGAATGAAATGTATGGTGA+AGG | - | chr2_2:1873565-1873584 | Msa0230060:intron | 35.0% | |
AATGAAATGTATGGTGAAGG+CGG | - | chr2_2:1873568-1873587 | Msa0230060:intron | 35.0% | |
ACAAAATCACCATTCGGATT+TGG | - | chr2_2:1873598-1873617 | Msa0230060:intron | 35.0% | |
CAAAATCACCATTCGGATTT+GGG | - | chr2_2:1873599-1873618 | Msa0230060:intron | 35.0% | |
AAAATCACCATTCGGATTTG+GGG | - | chr2_2:1873600-1873619 | Msa0230060:intron | 35.0% | |
TACACAAGTTAACATGGCAA+AGG | - | chr2_2:1873687-1873706 | Msa0230060:intron | 35.0% | |
! | ATTTTCCGGATAGTTCACAG+TGG | - | chr2_2:1866575-1866594 | Msa0230060:three_prime_UTR | 40.0% |
!! | GCCCTGTAGTATTGATTTGT+GGG | - | chr2_2:1866674-1866693 | Msa0230060:three_prime_UTR | 40.0% |
GCCCACAAATCAATACTACA+GGG | + | chr2_2:1866678-1866697 | None:intergenic | 40.0% | |
TGCCCACAAATCAATACTAC+AGG | + | chr2_2:1866679-1866698 | None:intergenic | 40.0% | |
GGGCAAAACAAAGTTCATTC+AGG | - | chr2_2:1866694-1866713 | Msa0230060:three_prime_UTR | 40.0% | |
TCATTCAGGATCAAAGGAGA+AGG | - | chr2_2:1866708-1866727 | Msa0230060:three_prime_UTR | 40.0% | |
! | GTCTGTCAAGCATTGCATAT+AGG | + | chr2_2:1866844-1866863 | None:intergenic | 40.0% |
TTAGCAACACGTCCAAAGTT+TGG | + | chr2_2:1866877-1866896 | None:intergenic | 40.0% | |
! | AGGGAAAAAGGTACATTTCC+AGG | + | chr2_2:1867087-1867106 | None:intergenic | 40.0% |
TCATGTTGCCATGCATTTGA+CGG | - | chr2_2:1867248-1867267 | Msa0230060:intron | 40.0% | |
AAACCTTATCCCACTAAGTG+GGG | + | chr2_2:1867475-1867494 | None:intergenic | 40.0% | |
CAAACCTTATCCCACTAAGT+GGG | + | chr2_2:1867476-1867495 | None:intergenic | 40.0% | |
GTCAGATGCTTCAAAGAAAG+AGG | + | chr2_2:1867676-1867695 | None:intergenic | 40.0% | |
!! | TCTTTGAAGCATCTGACTGA+TGG | - | chr2_2:1867679-1867698 | Msa0230060:CDS | 40.0% |
!! | CATCTGACTGATGGATTCAA+AGG | - | chr2_2:1867688-1867707 | Msa0230060:CDS | 40.0% |
!! | TCTGACTGATGGATTCAAAG+GGG | - | chr2_2:1867690-1867709 | Msa0230060:CDS | 40.0% |
TTTGAGTGTACATCCACCAA+AGG | - | chr2_2:1867759-1867778 | Msa0230060:intron | 40.0% | |
TGTTGGAACTCTCGAAGTAT+TGG | + | chr2_2:1867849-1867868 | None:intergenic | 40.0% | |
! | GTATCTAAGGTTGTAGACTG+AGG | - | chr2_2:1868226-1868245 | Msa0230060:intron | 40.0% |
GTTGTAGACTGAGGATTATC+AGG | - | chr2_2:1868235-1868254 | Msa0230060:intron | 40.0% | |
AAAAACAACTCGAGGAAGAC+AGG | - | chr2_2:1868371-1868390 | Msa0230060:intron | 40.0% | |
GACATATATATTTGGGAGGG+GGG | + | chr2_2:1868530-1868549 | None:intergenic | 40.0% | |
CTAACATAAAGTGGTTGAGC+TGG | - | chr2_2:1868814-1868833 | Msa0230060:intron | 40.0% | |
! | AAGGAGTATGAGGAGGTTTA+GGG | - | chr2_2:1868845-1868864 | Msa0230060:intron | 40.0% |
ACAGGGAACTAGTCAAAGAT+AGG | + | chr2_2:1869049-1869068 | None:intergenic | 40.0% | |
! | CTTTGACTAGTTCCCTGTAT+AGG | - | chr2_2:1869051-1869070 | Msa0230060:intron | 40.0% |
! | GTTTTCAGAAGCTGAGAAAC+TGG | - | chr2_2:1869141-1869160 | Msa0230060:intron | 40.0% |
AATCTCAAGGATGAAAGGCA+TGG | - | chr2_2:1869345-1869364 | Msa0230060:CDS | 40.0% | |
TCTCAAATTCATCCTTCGCA+AGG | + | chr2_2:1869508-1869527 | None:intergenic | 40.0% | |
AATTTCACCAGGAGCTACAA+CGG | + | chr2_2:1869546-1869565 | None:intergenic | 40.0% | |
TTGTAGCTCCTGGTGAAATT+GGG | - | chr2_2:1869546-1869565 | Msa0230060:intron | 40.0% | |
! | GGTGTGAAGTTTGATGACAT+AGG | - | chr2_2:1869567-1869586 | Msa0230060:intron | 40.0% |
CGCTCTTGAAGATGTTAAGA+AGG | - | chr2_2:1869590-1869609 | Msa0230060:intron | 40.0% | |
!! | AGATGTTAAGAAGGCACTTC+AGG | - | chr2_2:1869599-1869618 | Msa0230060:intron | 40.0% |
AAAAGCTCAGGTCTTCTCAT+TGG | + | chr2_2:1869639-1869658 | None:intergenic | 40.0% | |
TTTCCATGAGAGAAAAGCTC+AGG | + | chr2_2:1869651-1869670 | None:intergenic | 40.0% | |
!! | TCTCTCATGGAAACTTGTTG+CGG | - | chr2_2:1869658-1869677 | Msa0230060:intron | 40.0% |
!!! | ATCTTACTTTTTGGTCCTCC+TGG | - | chr2_2:1869786-1869805 | Msa0230060:intron | 40.0% |
TGGTTCAACCCTTACTTCAA+AGG | - | chr2_2:1869875-1869894 | Msa0230060:intron | 40.0% | |
CTAATCCTTGCTTGGACAAA+CGG | + | chr2_2:1869963-1869982 | None:intergenic | 40.0% | |
TCATCTTACTAGGTGCAGTT+GGG | + | chr2_2:1870177-1870196 | None:intergenic | 40.0% | |
ATCATCTTACTAGGTGCAGT+TGG | + | chr2_2:1870178-1870197 | None:intergenic | 40.0% | |
TCCGGTGTATTTGGTTAGAA+AGG | + | chr2_2:1870377-1870396 | None:intergenic | 40.0% | |
TGAGAAACAGCTTAGCTGTA+AGG | - | chr2_2:1870465-1870484 | Msa0230060:intron | 40.0% | |
GAGAAACAGCTTAGCTGTAA+GGG | - | chr2_2:1870466-1870485 | Msa0230060:intron | 40.0% | |
!! | GGGTTTTATCCCTACAATCA+AGG | - | chr2_2:1870930-1870949 | Msa0230060:intron | 40.0% |
TCTTTGCTGATACAGTGGTT+TGG | - | chr2_2:1871064-1871083 | Msa0230060:intron | 40.0% | |
GCAAAATCAGAGATGAGAGA+AGG | + | chr2_2:1871185-1871204 | None:intergenic | 40.0% | |
CTCATTCCTCATTCTTCTAG+TGG | + | chr2_2:1871802-1871821 | None:intergenic | 40.0% | |
CATCATCAAGGTCAAATGGA+CGG | + | chr2_2:1871893-1871912 | None:intergenic | 40.0% | |
ACAGCATCATCAAGGTCAAA+TGG | + | chr2_2:1871897-1871916 | None:intergenic | 40.0% | |
GACGAATAACAGCATCATCA+AGG | + | chr2_2:1871905-1871924 | None:intergenic | 40.0% | |
TTATTCGTCGTTTACCCAGA+AGG | - | chr2_2:1871916-1871935 | Msa0230060:intron | 40.0% | |
! | AGAGTTGTTGGTAGGAAATC+TGG | + | chr2_2:1872505-1872524 | None:intergenic | 40.0% |
GATTTCCTACCAACAACTCT+TGG | - | chr2_2:1872505-1872524 | Msa0230060:intron | 40.0% | |
!! | AAGCTTTAGAGAGTGTCACT+CGG | + | chr2_2:1872536-1872555 | None:intergenic | 40.0% |
TTTATTCTGATAGAGGCCCA+TGG | - | chr2_2:1872558-1872577 | Msa0230060:intron | 40.0% | |
AATACGAGCTCAGTTAGCAA+AGG | + | chr2_2:1872747-1872766 | None:intergenic | 40.0% | |
AACTGAGCTCGTATTTCTCT+AGG | - | chr2_2:1872752-1872771 | Msa0230060:CDS | 40.0% | |
!! | AAACTTGCTAGCTTGACTGA+AGG | - | chr2_2:1872868-1872887 | Msa0230060:intron | 40.0% |
ATACTCTGGCAGTGATTTGA+AGG | - | chr2_2:1872891-1872910 | Msa0230060:intron | 40.0% | |
AGGGTTGAGAGGCAAATTAA+TGG | + | chr2_2:1872965-1872984 | None:intergenic | 40.0% | |
CTCACATGACGAACATAATG+CGG | - | chr2_2:1872992-1873011 | Msa0230060:intron | 40.0% | |
AGCAGCATGAGATATATGAC+TGG | + | chr2_2:1873074-1873093 | None:intergenic | 40.0% | |
! | TCTTCTAAGAGCTCTTGAAC+AGG | + | chr2_2:1873143-1873162 | None:intergenic | 40.0% |
!! | CCGAAGCAAGTTTTGTGTAT+TGG | + | chr2_2:1873222-1873241 | None:intergenic | 40.0% |
GGTATTAAGGCCCCTTAATT+TGG | - | chr2_2:1873374-1873393 | Msa0230060:intron | 40.0% | |
TTCGTGCAAGCAAAATCCAT+AGG | - | chr2_2:1873402-1873421 | Msa0230060:intron | 40.0% | |
! | CGAGCCAGTTATTTCACATT+TGG | + | chr2_2:1873482-1873501 | None:intergenic | 40.0% |
!! | AACTGGCTCGTCATATATGT+AGG | - | chr2_2:1873492-1873511 | Msa0230060:intron | 40.0% |
GCATGAATGAGTTAAGGAAG+TGG | - | chr2_2:1873545-1873564 | Msa0230060:intron | 40.0% | |
ATGAACCCTTCCTTCAAGAT+CGG | + | chr2_2:1873627-1873646 | None:intergenic | 40.0% | |
! | ATCCTCGTTGGTGTAGTTTT+TGG | - | chr2_2:1873786-1873805 | Msa0230060:CDS | 40.0% |
TACCAAAAACTACACCAACG+AGG | + | chr2_2:1873791-1873810 | None:intergenic | 40.0% | |
! | GGTAGCCTCTAATTTTGTGT+AGG | - | chr2_2:1873922-1873941 | Msa0230060:CDS | 40.0% |
TGCAACCACTGTGAACTATC+CGG | + | chr2_2:1866583-1866602 | None:intergenic | 45.0% | |
!! | GGCCCTGTAGTATTGATTTG+TGG | - | chr2_2:1866673-1866692 | Msa0230060:three_prime_UTR | 45.0% |
CCAAACCTTATCCCACTAAG+TGG | + | chr2_2:1867477-1867496 | None:intergenic | 45.0% | |
CCACTTAGTGGGATAAGGTT+TGG | - | chr2_2:1867474-1867493 | Msa0230060:intron | 45.0% | |
!! | CTGACTGATGGATTCAAAGG+GGG | - | chr2_2:1867691-1867710 | Msa0230060:CDS | 45.0% |
! | TTGTACAGTAGTGATGGGGA+TGG | + | chr2_2:1867921-1867940 | None:intergenic | 45.0% |
TATATATTTGGGAGGGGGGA+TGG | + | chr2_2:1868526-1868545 | None:intergenic | 45.0% | |
! | TAGCTGGATTTTCATGTCGC+AGG | - | chr2_2:1868615-1868634 | Msa0230060:CDS | 45.0% |
CATCGGTATTCACATGCAAG+AGG | + | chr2_2:1868672-1868691 | None:intergenic | 45.0% | |
CTCTTGCATGTGAATACCGA+TGG | - | chr2_2:1868670-1868689 | Msa0230060:CDS | 45.0% | |
AAGTGGTTGAGCTGGAACAT+TGG | - | chr2_2:1868822-1868841 | Msa0230060:intron | 45.0% | |
! | GGAACATTGGAAGGAGTATG+AGG | - | chr2_2:1868835-1868854 | Msa0230060:intron | 45.0% |
! | ACATTGGAAGGAGTATGAGG+AGG | - | chr2_2:1868838-1868857 | Msa0230060:intron | 45.0% |
! | GAAGGAGTATGAGGAGGTTT+AGG | - | chr2_2:1868844-1868863 | Msa0230060:intron | 45.0% |
! | GAGGTTTAGGGTTCAAAACC+TGG | - | chr2_2:1868857-1868876 | Msa0230060:intron | 45.0% |
! | TAGAGTGTTATGTTGTGGCC+AGG | + | chr2_2:1868878-1868897 | None:intergenic | 45.0% |
TCAGAAGCTGAGAAACTGGT+AGG | - | chr2_2:1869145-1869164 | Msa0230060:intron | 45.0% | |
TGCCTGCTTCCTTCTATCAA+AGG | - | chr2_2:1869196-1869215 | Msa0230060:intron | 45.0% | |
CTCCTTTGATAGAAGGAAGC+AGG | + | chr2_2:1869201-1869220 | None:intergenic | 45.0% | |
TTACACGTATACCTTTCGCG+AGG | + | chr2_2:1869238-1869257 | None:intergenic | 45.0% | |
ATGGTTACAGAACCTTGCGA+AGG | - | chr2_2:1869493-1869512 | Msa0230060:intron | 45.0% | |
GTTGTAGCTCCTGGTGAAAT+TGG | - | chr2_2:1869545-1869564 | Msa0230060:intron | 45.0% | |
ACTTCACACCCAATTTCACC+AGG | + | chr2_2:1869557-1869576 | None:intergenic | 45.0% | |
! | AGACCTGAGCTTTTCTCTCA+TGG | - | chr2_2:1869645-1869664 | Msa0230060:intron | 45.0% |
!! | CTCTCATGGAAACTTGTTGC+GGG | - | chr2_2:1869659-1869678 | Msa0230060:intron | 45.0% |
!! | TGGAAACTTGTTGCGGGTAA+TGG | - | chr2_2:1869665-1869684 | Msa0230060:intron | 45.0% |
! | GAAACTTTTCAGCCCTGCAA+AGG | - | chr2_2:1869762-1869781 | Msa0230060:intron | 45.0% |
!! | TTTTTGGTCCTCCTGGAACT+GGG | - | chr2_2:1869793-1869812 | Msa0230060:intron | 45.0% |
CGTTTGTCCAAGCAAGGATT+AGG | - | chr2_2:1869961-1869980 | Msa0230060:intron | 45.0% | |
AAGCAAGGATTAGGCTGTAG+CGG | - | chr2_2:1869970-1869989 | Msa0230060:intron | 45.0% | |
AGCCGTGAATGATGTGGATA+TGG | - | chr2_2:1870052-1870071 | Msa0230060:intron | 45.0% | |
TTACTAGGTGCAGTTGGGTA+TGG | + | chr2_2:1870172-1870191 | None:intergenic | 45.0% | |
AAGCAGTTCTCCGGTGTATT+TGG | + | chr2_2:1870386-1870405 | None:intergenic | 45.0% | |
CACATTTGAGGGTCCATTTC+TGG | + | chr2_2:1871615-1871634 | None:intergenic | 45.0% | |
CAGAAATGGACCCTCAAATG+TGG | - | chr2_2:1871613-1871632 | Msa0230060:intron | 45.0% | |
! | TCGTAGGTAGACAGTTTGCT+TGG | - | chr2_2:1871747-1871766 | Msa0230060:intron | 45.0% |
! | CGTAGGTAGACAGTTTGCTT+GGG | - | chr2_2:1871748-1871767 | Msa0230060:intron | 45.0% |
! | GTAGGTAGACAGTTTGCTTG+GGG | - | chr2_2:1871749-1871768 | Msa0230060:intron | 45.0% |
ATGAGGCCACTAGAAGAATG+AGG | - | chr2_2:1871793-1871812 | Msa0230060:intron | 45.0% | |
! | TGTTGGTAGGAAATCTGGAG+TGG | + | chr2_2:1872500-1872519 | None:intergenic | 45.0% |
AGTTGCCAAGAGTTGTTGGT+AGG | + | chr2_2:1872513-1872532 | None:intergenic | 45.0% | |
TTCATTCGATTCTCCACGTC+TGG | + | chr2_2:1872793-1872812 | None:intergenic | 45.0% | |
AGCTTGACTGAAGGATACTC+TGG | - | chr2_2:1872877-1872896 | Msa0230060:intron | 45.0% | |
TCGTCATGTGAGGAATCTGA+GGG | + | chr2_2:1872984-1873003 | None:intergenic | 45.0% | |
TTCGTCATGTGAGGAATCTG+AGG | + | chr2_2:1872985-1873004 | None:intergenic | 45.0% | |
CGCATTATGTTCGTCATGTG+AGG | + | chr2_2:1872994-1873013 | None:intergenic | 45.0% | |
CACCTTATCTTCTTTCCACC+CGG | - | chr2_2:1873267-1873286 | Msa0230060:intron | 45.0% | |
!! | AATTCAATTGAAGTGCCGGG+TGG | + | chr2_2:1873285-1873304 | None:intergenic | 45.0% |
TGGCTCGTCATATATGTAGG+TGG | - | chr2_2:1873495-1873514 | Msa0230060:intron | 45.0% | |
GGCTCGTCATATATGTAGGT+GGG | - | chr2_2:1873496-1873515 | Msa0230060:intron | 45.0% | |
GTTGCATCATAGGCAACAGA+TGG | + | chr2_2:1873523-1873542 | None:intergenic | 45.0% | |
!! | ATTATTATTATTATTACAAA+AGG | - | chr2_2:1872194-1872213 | Msa0230060:intron | 5.0% |
! | CTTTGGACGTGTTGCTAAGC+TGG | - | chr2_2:1866879-1866898 | Msa0230060:three_prime_UTR | 50.0% |
!! | GATGTCAGCTTTTTCCGTCC+TGG | - | chr2_2:1867066-1867085 | Msa0230060:intron | 50.0% |
GCAAAGGACCGTCAAATGCA+TGG | + | chr2_2:1867259-1867278 | None:intergenic | 50.0% | |
ATGTAGCTGACCCCACTTAG+TGG | - | chr2_2:1867462-1867481 | Msa0230060:intron | 50.0% | |
TGTAGCTGACCCCACTTAGT+GGG | - | chr2_2:1867463-1867482 | Msa0230060:intron | 50.0% | |
TGACCCCACTTAGTGGGATA+AGG | - | chr2_2:1867469-1867488 | Msa0230060:intron | 50.0% | |
AGGGGGAAAGACATCAGAAG+AGG | - | chr2_2:1867708-1867727 | Msa0230060:CDS | 50.0% | |
GGTTGAGCTGGAACATTGGA+AGG | - | chr2_2:1868826-1868845 | Msa0230060:intron | 50.0% | |
CCTCAACAGTTCCCTCCTTA+GGG | + | chr2_2:1868930-1868949 | None:intergenic | 50.0% | |
TCCTCAACAGTTCCCTCCTT+AGG | + | chr2_2:1868931-1868950 | None:intergenic | 50.0% | |
AAGCTGAGAAACTGGTAGGC+TGG | - | chr2_2:1869149-1869168 | Msa0230060:intron | 50.0% | |
AGCTGAGAAACTGGTAGGCT+GGG | - | chr2_2:1869150-1869169 | Msa0230060:intron | 50.0% | |
GATTGTGCATACCTCGCGAA+AGG | - | chr2_2:1869224-1869243 | Msa0230060:intron | 50.0% | |
TCTCAGAACCTCAAGGCATG+TGG | - | chr2_2:1869388-1869407 | Msa0230060:CDS | 50.0% | |
!! | CTTTTTGGTCCTCCTGGAAC+TGG | - | chr2_2:1869792-1869811 | Msa0230060:intron | 50.0% |
! | AGAAGGGTTTTCCCAGTTCC+AGG | + | chr2_2:1869807-1869826 | None:intergenic | 50.0% |
TGGAACTGGGAAAACCCTTC+TGG | - | chr2_2:1869806-1869825 | Msa0230060:intron | 50.0% | |
! | AAGGCACTTGCAACAGAAGC+TGG | - | chr2_2:1869831-1869850 | Msa0230060:intron | 50.0% |
TTAGGCCGTTTGTCCAAGCA+AGG | - | chr2_2:1869955-1869974 | Msa0230060:intron | 50.0% | |
GCTACAGCCTAATCCTTGCT+TGG | + | chr2_2:1869971-1869990 | None:intergenic | 50.0% | |
CATTCACGGCTTCCAGTACT+AGG | + | chr2_2:1870043-1870062 | None:intergenic | 50.0% | |
ACTGGAAGCCGTGAATGATG+TGG | - | chr2_2:1870046-1870065 | Msa0230060:intron | 50.0% | |
! | CCTCGTTGACTAATCCCACT+TGG | + | chr2_2:1870625-1870644 | None:intergenic | 50.0% |
!! | CCAAGTGGGATTAGTCAACG+AGG | - | chr2_2:1870622-1870641 | Msa0230060:CDS | 50.0% |
CTCGTGCGCCTTTAAACTAC+TGG | + | chr2_2:1870821-1870840 | None:intergenic | 50.0% | |
AATGACAGGTGCAAGCTTGC+TGG | + | chr2_2:1871128-1871147 | None:intergenic | 50.0% | |
GAATGAGTTCATGGCAGCGT+GGG | - | chr2_2:1871815-1871834 | Msa0230060:CDS | 50.0% | |
TCGGAGTTGCCAAGAGTTGT+TGG | + | chr2_2:1872517-1872536 | None:intergenic | 50.0% | |
TGAGGAATCTGAGGGTTGAG+AGG | + | chr2_2:1872976-1872995 | None:intergenic | 50.0% | |
TATATGCTGCAGCGACACAG+AGG | + | chr2_2:1873118-1873137 | None:intergenic | 50.0% | |
TGCCGGGTGGAAAGAAGATA+AGG | + | chr2_2:1873272-1873291 | None:intergenic | 50.0% | |
GATTTGGGGACCGATCTTGA+AGG | - | chr2_2:1873614-1873633 | Msa0230060:CDS | 50.0% | |
GCAGAAGCTGTGAAATGCAG+AGG | + | chr2_2:1873750-1873769 | None:intergenic | 50.0% | |
CCCTAAGGAGGGAACTGTTG+AGG | - | chr2_2:1868927-1868946 | Msa0230060:intron | 55.0% | |
TTCACCAGGAGCTACAACGG+CGG | + | chr2_2:1869543-1869562 | None:intergenic | 55.0% | |
! | AGGGTTTTCCCAGTTCCAGG+AGG | + | chr2_2:1869804-1869823 | None:intergenic | 55.0% |
TGGGAAAACCCTTCTGGCGA+AGG | - | chr2_2:1869812-1869831 | Msa0230060:intron | 55.0% | |
TGCAAGTGCCTTCGCCAGAA+GGG | + | chr2_2:1869823-1869842 | None:intergenic | 55.0% | |
TTGCAAGTGCCTTCGCCAGA+AGG | + | chr2_2:1869824-1869843 | None:intergenic | 55.0% | |
GGCTCGCTGGTAGAGTCAAA+TGG | - | chr2_2:1870135-1870154 | Msa0230060:intron | 55.0% | |
AGGTGGTGCTCATGAGCATG+AGG | - | chr2_2:1871776-1871795 | Msa0230060:intron | 55.0% | |
GGAATGAGTTCATGGCAGCG+TGG | - | chr2_2:1871814-1871833 | Msa0230060:CDS | 55.0% | |
GATCGGTCCCCAAATCCGAA+TGG | + | chr2_2:1873610-1873629 | None:intergenic | 55.0% | |
TGGGGACCGATCTTGAAGGA+AGG | - | chr2_2:1873618-1873637 | Msa0230060:CDS | 55.0% | |
GGGGACCGATCTTGAAGGAA+GGG | - | chr2_2:1873619-1873638 | Msa0230060:CDS | 55.0% | |
GTTTCCGCCGTTGTAGCTCC+TGG | - | chr2_2:1869536-1869555 | Msa0230060:intron | 60.0% | |
! | GACAGTTTGCTTGGGGCTCG+AGG | - | chr2_2:1871756-1871775 | Msa0230060:intron | 60.0% |
! | AGTTTGCTTGGGGCTCGAGG+TGG | - | chr2_2:1871759-1871778 | Msa0230060:intron | 60.0% |
GAGTTCATGGCAGCGTGGGA+TGG | - | chr2_2:1871819-1871838 | Msa0230060:CDS | 60.0% | |
!! | TGGCAGCGTGGGATGGATTG+AGG | - | chr2_2:1871826-1871845 | Msa0230060:CDS | 60.0% |
TTCTTCACCTGGGGACTGCC+AGG | - | chr2_2:1872465-1872484 | Msa0230060:intron | 60.0% | |
CTGGAGTGGCATCAGATGCC+TGG | + | chr2_2:1872486-1872505 | None:intergenic | 60.0% | |
TCAGATGCCTGGCAGTCCCC+AGG | + | chr2_2:1872475-1872494 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 1866511 | 1873996 | 1866511 | ID=Msa0230060;Name=Msa0230060 |
chr2_2 | mRNA | 1866511 | 1873996 | 1866511 | ID=Msa0230060-mRNA-1;Parent=Msa0230060;Name=Msa0230060-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.85|0.73|1|0.85|0.93|15|460|501 |
chr2_2 | exon | 1866511 | 1866993 | 1866511 | ID=Msa0230060-mRNA-1:exon:758;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1867084 | 1867156 | 1867084 | ID=Msa0230060-mRNA-1:exon:757;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1867335 | 1867394 | 1867335 | ID=Msa0230060-mRNA-1:exon:756;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1867595 | 1867733 | 1867595 | ID=Msa0230060-mRNA-1:exon:755;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1868570 | 1868754 | 1868570 | ID=Msa0230060-mRNA-1:exon:754;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1869345 | 1869428 | 1869345 | ID=Msa0230060-mRNA-1:exon:753;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1870611 | 1870733 | 1870611 | ID=Msa0230060-mRNA-1:exon:752;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1870827 | 1870918 | 1870827 | ID=Msa0230060-mRNA-1:exon:751;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1871086 | 1871174 | 1871086 | ID=Msa0230060-mRNA-1:exon:750;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1871262 | 1871358 | 1871262 | ID=Msa0230060-mRNA-1:exon:749;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1871795 | 1871870 | 1871795 | ID=Msa0230060-mRNA-1:exon:748;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1872072 | 1872161 | 1872072 | ID=Msa0230060-mRNA-1:exon:747;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1872727 | 1872834 | 1872727 | ID=Msa0230060-mRNA-1:exon:746;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1873607 | 1873645 | 1873607 | ID=Msa0230060-mRNA-1:exon:745;Parent=Msa0230060-mRNA-1 |
chr2_2 | exon | 1873769 | 1873996 | 1873769 | ID=Msa0230060-mRNA-1:exon:744;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1873769 | 1873996 | 1873769 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1873607 | 1873645 | 1873607 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1872727 | 1872834 | 1872727 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1872072 | 1872161 | 1872072 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1871795 | 1871870 | 1871795 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1871262 | 1871358 | 1871262 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1871086 | 1871174 | 1871086 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1870827 | 1870918 | 1870827 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1870611 | 1870733 | 1870611 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1869345 | 1869428 | 1869345 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1868570 | 1868754 | 1868570 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1867595 | 1867733 | 1867595 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1867335 | 1867394 | 1867335 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1867084 | 1867156 | 1867084 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | CDS | 1866971 | 1866993 | 1866971 | ID=Msa0230060-mRNA-1:cds;Parent=Msa0230060-mRNA-1 |
chr2_2 | three_prime_UTR | 1866511 | 1866970 | 1866511 | ID=Msa0230060-mRNA-1:three_prime_utr;Parent=Msa0230060-mRNA-1 |
Gene Sequence |
Protein sequence |