AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0863800


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863800 MtrunA17_Chr5g0445591 97.917 672 14 0 1 672 1 672 0.0 1350
Msa0863800 MtrunA17_Chr2g0280251 25.954 262 163 10 220 471 72 312 1.56e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863800 AT1G55930.1 68.341 657 182 11 1 649 1 639 0.0 874
Msa0863800 AT3G13070.1 76.316 570 123 4 85 643 76 644 0.0 848
Msa0863800 AT1G55930.2 69.667 600 157 10 1 592 1 583 0.0 815

Find 173 sgRNAs with CRISPR-Local

Find 524 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAATTCTTCGTTTGTTTA+AGG 0.144682 5_4:-63838234 Msa0863800:CDS
CTTAAATTGCTTGGCTTAAA+AGG 0.171364 5_4:-63835647 Msa0863800:CDS
ACAAATAGTATTTCACTTCT+AGG 0.173486 5_4:+63830718 None:intergenic
AAAATTGGAATTGGGAAATT+AGG 0.179897 5_4:+63838944 None:intergenic
GTTTCTTCTCTTTCGGTTCC+TGG 0.217823 5_4:+63831436 None:intergenic
TTATGCAAAAGAAGAAAATT+TGG 0.227693 5_4:+63838781 None:intergenic
GGTTAACTGAAAGGGAAAAT+TGG 0.238343 5_4:+63838929 None:intergenic
TTCCTCACAACCATACTTAT+TGG 0.242888 5_4:-63836967 Msa0863800:CDS
ATTGTTATTGGCTTTGCTTT+TGG 0.245514 5_4:-63838204 Msa0863800:CDS
CCTTCAGTAGCCAAAACTTT+AGG 0.245516 5_4:+63838329 None:intergenic
GAGAATGCCAATGAAGGTTT+TGG 0.249627 5_4:-63838624 Msa0863800:CDS
GTAAATATGACATCTTTATT+AGG 0.251337 5_4:+63830809 None:intergenic
GGTGAAGAGAGGAATTATTT+TGG 0.252414 5_4:-63838387 Msa0863800:CDS
ATGTCTTCATGTGGTCTCTT+TGG 0.269483 5_4:+63831082 None:intergenic
AAAATATGTTTCTTCTCTTT+CGG 0.292690 5_4:+63831429 None:intergenic
GACACTCGAATCAGGGGTTC+TGG 0.292964 5_4:-63838708 Msa0863800:CDS
TAAGGAACAAGGATTGTTAT+TGG 0.294468 5_4:-63838216 Msa0863800:CDS
CTTCAGTAGCCAAAACTTTA+GGG 0.296810 5_4:+63838330 None:intergenic
CTGAAAGGGAAAATTGGAAT+TGG 0.300672 5_4:+63838935 None:intergenic
GTTTGTGGGGTGTTGGTGTT+TGG 0.313415 5_4:-63838356 Msa0863800:CDS
CCTTTCAAGAACTAACTTGA+TGG 0.314069 5_4:+63831497 None:intergenic
AATGCTGGATATGGTGTTAT+TGG 0.317649 5_4:-63838299 Msa0863800:CDS
TGGTTGTCAGATGCTCTGTT+TGG 0.320871 5_4:+63839042 None:intergenic
AGCTTTCATCTTTCAAGTTA+TGG 0.321638 5_4:-63838539 Msa0863800:CDS
GCAACGTGTTGATAATATAA+TGG 0.324648 5_4:-63833464 Msa0863800:CDS
AATTGTTACCTTTCTTTCAA+TGG 0.330333 5_4:-63835675 Msa0863800:CDS
GTTTGGATGCCCTAAAGTTT+TGG 0.332563 5_4:-63838339 Msa0863800:CDS
CACCAATATGAGACGGTATC+AGG 0.333419 5_4:-63831564 Msa0863800:CDS
TATTGGAAAGTGTATACTTT+TGG 0.349846 5_4:-63838282 Msa0863800:CDS
GAAGTTTACAAATGAAGTTT+TGG 0.355145 5_4:-63838408 Msa0863800:CDS
AAGTATCACAGTTGGAGATT+TGG 0.355313 5_4:-63833292 Msa0863800:CDS
AAATTGGAATTGGGAAATTA+GGG 0.359199 5_4:+63838945 None:intergenic
ATTGTTACCTTTCTTTCAAT+GGG 0.363607 5_4:-63835674 Msa0863800:CDS
ATACGTTGTGCCAATAAGTA+TGG 0.364028 5_4:+63836957 None:intergenic
AGCTCCTCTTCAGTTACATA+TGG 0.364332 5_4:+63834094 None:intergenic
CGGTTCCTGGTGGTCACCAT+TGG 0.365554 5_4:+63831449 None:intergenic
ATAGAACCCTCTATTTATCT+TGG 0.367209 5_4:+63830844 None:intergenic
TTCTGCATGTTATAACTCAT+TGG 0.376582 5_4:+63830872 None:intergenic
TTTGTACCCAAAACCTTCAT+TGG 0.380761 5_4:+63838617 None:intergenic
TTAGCAATGACACTCGAATC+AGG 0.381702 5_4:-63838716 Msa0863800:exon
TTGATGGTTTCTCCTGTCCT+TGG 0.385943 5_4:+63831513 None:intergenic
TTGCAGATTCAATGTCTGTT+TGG 0.392142 5_4:-63833160 Msa0863800:intron
TGGAGGAGAGTTGGTGGACT+TGG 0.394171 5_4:+63839002 None:intergenic
AACCTTTCCAAGATAAATAG+AGG 0.395660 5_4:-63830851 Msa0863800:three_prime_UTR
GCCAGTGGCATGGCTTTCTC+TGG 0.399023 5_4:-63835717 Msa0863800:CDS
TTCTTAGAGAATTTCGAATC+AGG 0.399483 5_4:-63833133 Msa0863800:CDS
TGGACTGACCCCACTTGCTC+TGG 0.404495 5_4:+63839022 None:intergenic
TGCTACTGTTTGTGGGGTGT+TGG 0.407645 5_4:-63838363 Msa0863800:CDS
ACTGCAGCATTCGGCGAAGC+TGG 0.410977 5_4:-63836806 Msa0863800:CDS
TCAGCAAAATATTCCAAGTT+CGG 0.414859 5_4:-63838809 Msa0863800:five_prime_UTR
CAACGTGTTGATAATATAAT+GGG 0.420023 5_4:-63833463 Msa0863800:CDS
GGCTTTGTATGTGAAGCCTT+TGG 0.420653 5_4:-63831543 Msa0863800:CDS
GATTTCAGTGAGAAGCAAAA+TGG 0.423188 5_4:+63835946 None:intergenic
AGCAATAGAAGAGGAAGAAC+AGG 0.424068 5_4:-63834038 Msa0863800:intron
TAATGAATATGTAGTTGATC+AGG 0.426174 5_4:-63831056 Msa0863800:CDS
CACAGAGGTGGCTCGGTTTG+TGG 0.428116 5_4:-63835894 Msa0863800:intron
TGAAAGGGAAAATTGGAATT+GGG 0.428826 5_4:+63838936 None:intergenic
AAGCATCCCCATTGAAAGAA+AGG 0.428833 5_4:+63835667 None:intergenic
GCTGGTGTCAGCGCAGCAAC+AGG 0.434643 5_4:-63836788 Msa0863800:CDS
AGCCTGATACCGTCTCATAT+TGG 0.438335 5_4:+63831562 None:intergenic
AGCATATGCGATGGATCTGC+TGG 0.441250 5_4:-63833437 Msa0863800:CDS
GGTTCGTGAGTTGGCTGAAA+AGG 0.443988 5_4:-63837037 Msa0863800:CDS
GGTGTGGTGAATGCTGGATA+TGG 0.447491 5_4:-63838308 Msa0863800:CDS
GCTGAAAAGGAGTCTGAAAA+TGG 0.450196 5_4:-63837024 Msa0863800:CDS
ATGGGGATGCTTAAATTGCT+TGG 0.451732 5_4:-63835656 Msa0863800:CDS
ACTGAAGGTGTGGTGAATGC+TGG 0.457072 5_4:-63838314 Msa0863800:CDS
GGGTTTGAGAAGGAAGAGAA+TGG 0.458438 5_4:+63838965 None:intergenic
GAAGCTGCAACTGCAGCATT+CGG 0.461207 5_4:-63836815 Msa0863800:CDS
CAGTTGGACACAATAGGAAA+AGG 0.462993 5_4:+63838584 None:intergenic
ATGAGTATGGTGGAACTGTT+GGG 0.464601 5_4:-63833085 Msa0863800:CDS
AACTATTAAGAAAGCTAGAA+AGG 0.467493 5_4:-63830741 Msa0863800:three_prime_UTR
ACACTCGAATCAGGGGTTCT+GGG 0.470559 5_4:-63838707 Msa0863800:CDS
CTTCGTTTGTTTAAGGAACA+AGG 0.470581 5_4:-63838227 Msa0863800:CDS
GGTTTGAGAAGGAAGAGAAT+GGG 0.476915 5_4:+63838966 None:intergenic
AGCTTGAAGGTGAAGTGTAT+TGG 0.479042 5_4:-63838488 Msa0863800:CDS
TTTGTACGATTCTCATGCAC+AGG 0.480881 5_4:+63838647 None:intergenic
CCATCAAGTTAGTTCTTGAA+AGG 0.481575 5_4:-63831497 Msa0863800:CDS
CCAACACAGTTGGACACAAT+AGG 0.482123 5_4:+63838578 None:intergenic
CATCAAGTTAGTTCTTGAAA+GGG 0.483658 5_4:-63831496 Msa0863800:CDS
GCTGTCGTTCTTAATGAGTA+TGG 0.485683 5_4:-63833098 Msa0863800:CDS
GAGAAGGCGTGGAGGAGAGT+TGG 0.486767 5_4:+63838993 None:intergenic
AAGCCTTTGGTTACATTCCA+AGG 0.487368 5_4:-63831530 Msa0863800:CDS
AAATATTGCAGCAACTGCTC+TGG 0.490255 5_4:-63836843 Msa0863800:CDS
CGAGAAAGGTGAGTGCTGTT+CGG 0.496101 5_4:-63831240 Msa0863800:CDS
CGATTACTACACTTTGGCCT+TGG 0.498418 5_4:-63838148 Msa0863800:CDS
CCTATTGTGTCCAACTGTGT+TGG 0.498989 5_4:-63838578 Msa0863800:CDS
TCTAGGTCAGGCCAGTGGCA+TGG 0.499682 5_4:-63835727 Msa0863800:intron
AGCTCGCATTACTATGTAGC+CGG 0.504772 5_4:+63831985 None:intergenic
AGACTTCGATTACTACACTT+TGG 0.504973 5_4:-63838154 Msa0863800:CDS
TTTGGTTACATTCCAAGGAC+AGG 0.505663 5_4:-63831525 Msa0863800:CDS
GATGTTGTTGAGGAAATTGT+TGG 0.507415 5_4:-63832296 Msa0863800:CDS
GTCTTCTGAGAGTTGATCAA+TGG 0.508494 5_4:+63831931 None:intergenic
TACTACACTTTGGCCTTGGA+AGG 0.509755 5_4:-63838144 Msa0863800:intron
GAGGAAATACAAAAGAAAAC+CGG 0.512173 5_4:-63832004 Msa0863800:CDS
ACCCTCTATTTATCTTGGAA+AGG 0.513182 5_4:+63830849 None:intergenic
GAATGGGAATTGAGAAGGCG+TGG 0.515671 5_4:+63838982 None:intergenic
AAGGTAACAATTCTTCCTGC+AGG 0.515803 5_4:+63835686 None:intergenic
AGGAGCTAAAACTGATGCTA+AGG 0.517603 5_4:-63834078 Msa0863800:CDS
TGTAAACTTCAAATTAGCAT+CGG 0.521085 5_4:+63838421 None:intergenic
TACAAAGAGAATGCCAATGA+AGG 0.521281 5_4:-63838630 Msa0863800:CDS
AATGAGTATGGTGGAACTGT+TGG 0.522457 5_4:-63833086 Msa0863800:CDS
AGTTGGTGGAGCTAGCTTGA+AGG 0.527234 5_4:-63838501 Msa0863800:CDS
ACTCTAGAAAGTATCACAGT+TGG 0.529514 5_4:-63833300 Msa0863800:CDS
GAAGATGAGGCAGAGTATGA+TGG 0.530442 5_4:-63831115 Msa0863800:CDS
AAGGCGTGGAGGAGAGTTGG+TGG 0.534350 5_4:+63838996 None:intergenic
AGTTGGACACAATAGGAAAA+GGG 0.534542 5_4:+63838585 None:intergenic
ACTAGCAGGAAATGCGAGAA+AGG 0.534984 5_4:-63831254 Msa0863800:CDS
TAGCAATGACACTCGAATCA+GGG 0.545433 5_4:-63838715 Msa0863800:exon
GGATATGATCGAAAATGTGT+TGG 0.552369 5_4:-63833698 Msa0863800:CDS
GAAGAGAATGGGAATTGAGA+AGG 0.558087 5_4:+63838977 None:intergenic
ACCAGAGAAAGCCATGCCAC+TGG 0.561580 5_4:+63835716 None:intergenic
TTACCAGGTACAAAATATGC+AGG 0.563099 5_4:+63833261 None:intergenic
TGCTTGGCTTAAAAGGAAGT+AGG 0.566558 5_4:-63835640 Msa0863800:intron
ATTGAAAGGGCCAACACAGT+TGG 0.567652 5_4:+63838568 None:intergenic
CTAAGGGGTGCAGAATTAAG+TGG 0.568729 5_4:-63834061 Msa0863800:CDS
CATCTGACAACCAGAGCAAG+TGG 0.569445 5_4:-63839032 Msa0863800:five_prime_UTR
TTTGGCTGCTACTGTTTGTG+GGG 0.569636 5_4:-63838369 Msa0863800:CDS
CGCAGCAACAGGAGTGATGA+CGG 0.569783 5_4:-63836777 Msa0863800:intron
TCTTTGACGCAGATACTAGC+AGG 0.570828 5_4:-63831268 Msa0863800:intron
TCTCTGGTACTGTATCCTGC+AGG 0.575131 5_4:-63835701 Msa0863800:CDS
ATAATGCCACAGAGGTGGCT+CGG 0.576593 5_4:-63835901 Msa0863800:CDS
CGGTTTGAAAGATTACATAG+TGG 0.579872 5_4:-63831220 Msa0863800:CDS
TGACACCAATGGTGACCACC+AGG 0.580712 5_4:-63831454 Msa0863800:CDS
GGAGCTAAAACTGATGCTAA+GGG 0.580822 5_4:-63834077 Msa0863800:CDS
ATGCAACCGAGGACCGAGGA+AGG 0.582282 5_4:+63838855 None:intergenic
ATATTTACTATATTCATCCA+AGG 0.584441 5_4:-63830794 Msa0863800:three_prime_UTR
ACATAGTGGTGACGAAATGT+TGG 0.586851 5_4:-63831206 Msa0863800:CDS
AAGGTGAAGTGTATTGGTAG+TGG 0.586954 5_4:-63838482 Msa0863800:CDS
TGGGAATTGAGAAGGCGTGG+AGG 0.594273 5_4:+63838985 None:intergenic
CTACATAGTAATGCGAGCTG+AGG 0.595387 5_4:-63831981 Msa0863800:CDS
TGGGAAATTAGGGTTTGAGA+AGG 0.597485 5_4:+63838955 None:intergenic
TAGAGAATTTCGAATCAGGA+AGG 0.597594 5_4:-63833129 Msa0863800:CDS
TCTGCTGGATTATGTCCAAA+AGG 0.598511 5_4:-63833422 Msa0863800:intron
ATCTGACAACCAGAGCAAGT+GGG 0.600725 5_4:-63839031 Msa0863800:five_prime_UTR
ATTAAGTGGAGCAATAGAAG+AGG 0.604158 5_4:-63834047 Msa0863800:CDS
TGGTGAGGAATCTGAAGATG+AGG 0.605665 5_4:-63831128 Msa0863800:CDS
ATTCGATGAAAATGACTCGA+AGG 0.605810 5_4:-63832267 Msa0863800:intron
TGAGCCATATGTAACTGAAG+AGG 0.606858 5_4:-63834098 Msa0863800:CDS
AATAAGCACGATACCTTCCA+AGG 0.610333 5_4:+63838131 None:intergenic
AATGGGTATAGCATATGCGA+TGG 0.610921 5_4:-63833446 Msa0863800:CDS
AAGAAAATGGAACAGTGGTG+AGG 0.611792 5_4:-63831143 Msa0863800:CDS
AGCAATGACACTCGAATCAG+GGG 0.613707 5_4:-63838714 Msa0863800:exon
TCATTAGAAATGTCTTCATG+TGG 0.617541 5_4:+63831073 None:intergenic
ACCTTTCCAAGATAAATAGA+GGG 0.619558 5_4:-63830850 Msa0863800:three_prime_UTR
GGTTAAGAGTACTTGGCCGA+CGG 0.620282 5_4:-63838261 Msa0863800:CDS
TCTGACAACCAGAGCAAGTG+GGG 0.628682 5_4:-63839030 Msa0863800:five_prime_UTR
GTCGTTCTTAATGAGTATGG+TGG 0.629139 5_4:-63833095 Msa0863800:CDS
AACTCTTGAAGATGTTGTTG+AGG 0.632860 5_4:-63832306 Msa0863800:CDS
TCTTCTCTTTCGGTTCCTGG+TGG 0.632904 5_4:+63831439 None:intergenic
ATTGCAACAACATCAACAAG+AGG 0.634332 5_4:+63833640 None:intergenic
TACTCCGAAGTGATGTTACT+CGG 0.634521 5_4:-63836990 Msa0863800:CDS
TACATAGTAATGCGAGCTGA+GGG 0.634796 5_4:-63831980 Msa0863800:CDS
TCGAATCAGGAAGGTTCACA+TGG 0.635122 5_4:-63833120 Msa0863800:CDS
GGGTTACACATCAATACTCA+AGG 0.641002 5_4:-63833579 Msa0863800:intron
TGTCCTTGGAATGTAACCAA+AGG 0.645922 5_4:+63831527 None:intergenic
TGCCAATAAGTATGGTTGTG+AGG 0.646643 5_4:+63836965 None:intergenic
GGTTCATAATGCCACAGAGG+TGG 0.647644 5_4:-63835906 Msa0863800:CDS
GTGAAAAGAAAATGGAACAG+TGG 0.650525 5_4:-63831148 Msa0863800:CDS
ACAAGTGATGAAAATCTACA+AGG 0.660380 5_4:+63833602 None:intergenic
TTGTTACCTTTCTTTCAATG+GGG 0.663367 5_4:-63835673 Msa0863800:CDS
TCAGGGTCACCAATATGAGA+CGG 0.666733 5_4:-63831571 Msa0863800:intron
CGAAGAATTTGCAACACCGT+CGG 0.668231 5_4:+63838245 None:intergenic
GAGCTAAAACTGATGCTAAG+GGG 0.682892 5_4:-63834076 Msa0863800:CDS
ATGCCTCTAGGTCAGGCCAG+TGG 0.689653 5_4:-63835732 Msa0863800:intron
CGCGGTTCATAATGCCACAG+AGG 0.691367 5_4:-63835909 Msa0863800:CDS
TTGTACGATTCTCATGCACA+GGG 0.692351 5_4:+63838648 None:intergenic
TGAGATGCAACCGAGGACCG+AGG 0.692576 5_4:+63838851 None:intergenic
TTGGTTATGAGATGCAACCG+AGG 0.697083 5_4:+63838844 None:intergenic
GATGACAACGATGACACCAA+TGG 0.698123 5_4:-63831465 Msa0863800:CDS
CACAAACCGAGCCACCTCTG+TGG 0.705597 5_4:+63835895 None:intergenic
TGAGTATGGTGGAACTGTTG+GGG 0.713650 5_4:-63833084 Msa0863800:intron
CTTGAACATCAAGATGCCAG+AGG 0.714743 5_4:-63831909 Msa0863800:intron
GGAACCGAGTAACATCACTT+CGG 0.717695 5_4:+63836986 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGAATAAATCAATATTT+TGG - chr5_4:63835094-63835113 Msa0863800:intron 10.0%
!!! TATATTATGTTTAATTTTGA+AGG - chr5_4:63836425-63836444 Msa0863800:intron 10.0%
!!! ATATTATGTTTAATTTTGAA+GGG - chr5_4:63836426-63836445 Msa0863800:intron 10.0%
!! TTAAAATTAACATAAAAAAG+AGG + chr5_4:63836880-63836899 None:intergenic 10.0%
!! GATAAAAAAAAAAAAAATTG+AGG + chr5_4:63838754-63838773 None:intergenic 10.0%
!!! GAAAAAAATAGTGAAAATTT+TGG + chr5_4:63830848-63830867 None:intergenic 15.0%
!! TTGAATATTGTAATAATAAC+TGG - chr5_4:63831997-63832016 Msa0863800:CDS 15.0%
!!! GACTAAATGAAATTTAAAAT+AGG + chr5_4:63833352-63833371 None:intergenic 15.0%
!! TACTTAAACAAAAGTAAAAT+AGG - chr5_4:63834796-63834815 Msa0863800:intron 15.0%
!! ACTTAAACAAAAGTAAAATA+GGG - chr5_4:63834797-63834816 Msa0863800:intron 15.0%
!! AAATCATTAGAGATAAAATT+GGG - chr5_4:63835266-63835285 Msa0863800:intron 15.0%
!! TTTATTGAATTTAACACTAA+AGG - chr5_4:63835614-63835633 Msa0863800:intron 15.0%
!!! TAAAATTTTATTTTCTCTAG+AGG + chr5_4:63835811-63835830 None:intergenic 15.0%
!! AAACACTATAAATAATCAAA+TGG + chr5_4:63835974-63835993 None:intergenic 15.0%
!! TTGACATAAATACAAATATA+TGG - chr5_4:63836738-63836757 Msa0863800:intron 15.0%
!!! TAACAATTTTGATAAGATAA+TGG - chr5_4:63837370-63837389 Msa0863800:intron 15.0%
!! ACTTATAAATAATACCATAA+GGG + chr5_4:63838391-63838410 None:intergenic 15.0%
!! AACTTATAAATAATACCATA+AGG + chr5_4:63838392-63838411 None:intergenic 15.0%
!!! ATTTTCTTTTCACAATTTTT+GGG + chr5_4:63838598-63838617 None:intergenic 15.0%
!!! TTTTATCATTTCTTTCTAAT+TGG - chr5_4:63838767-63838786 Msa0863800:five_prime_UTR 15.0%
!!! AAAATTTTGGTTAACTGAAA+GGG + chr5_4:63830835-63830854 None:intergenic 20.0%
!! TTATGCAAAAGAAGAAAATT+TGG + chr5_4:63830975-63830994 None:intergenic 20.0%
!! GGAAAAAATTTGAATTTAGT+TGG - chr5_4:63831235-63831254 Msa0863800:CDS 20.0%
!! AAAAATTTGAATTTAGTTGG+TGG - chr5_4:63831238-63831257 Msa0863800:CDS 20.0%
!!! AGTGACTATTTTTATATGTA+TGG - chr5_4:63831659-63831678 Msa0863800:intron 20.0%
!! TTCAACAAAACCAAAAAAAT+TGG + chr5_4:63831935-63831954 None:intergenic 20.0%
!! AAAAATCAATTCCTGTATAT+TGG - chr5_4:63832066-63832085 Msa0863800:intron 20.0%
!! AAAATCAATTCCTGTATATT+GGG - chr5_4:63832067-63832086 Msa0863800:intron 20.0%
!! AAAAATTATGACCTGTATAT+TGG - chr5_4:63832132-63832151 Msa0863800:intron 20.0%
!! AAAATTATGACCTGTATATT+GGG - chr5_4:63832133-63832152 Msa0863800:intron 20.0%
!! TTGATATACTGAAATATTCA+AGG + chr5_4:63833094-63833113 None:intergenic 20.0%
!! AGATAATTTATATCAAGTAC+AGG + chr5_4:63833388-63833407 None:intergenic 20.0%
!!! AATTATCTTTTCAAACAGAA+TGG - chr5_4:63833400-63833419 Msa0863800:intron 20.0%
!! AAAGATATTACAAGAGATTT+CGG + chr5_4:63833489-63833508 None:intergenic 20.0%
!! CCAAATATAAAAAAAGTAGA+AGG + chr5_4:63833903-63833922 None:intergenic 20.0%
!!! CCTTCTACTTTTTTTATATT+TGG - chr5_4:63833900-63833919 Msa0863800:intron 20.0%
!!! TTTTAAATTTTAATGCCTCT+AGG - chr5_4:63834009-63834028 Msa0863800:intron 20.0%
!! AATGTACAAGAGAATATTAA+TGG + chr5_4:63834159-63834178 None:intergenic 20.0%
!! TAAATGTATGAGAGATTAAA+TGG - chr5_4:63834334-63834353 Msa0863800:intron 20.0%
!! AAATGTATGAGAGATTAAAT+GGG - chr5_4:63834335-63834354 Msa0863800:intron 20.0%
!! GAAATCATTAGAGATAAAAT+TGG - chr5_4:63835265-63835284 Msa0863800:intron 20.0%
!! AATCATTAGAGATAAAATTG+GGG - chr5_4:63835267-63835286 Msa0863800:intron 20.0%
!! TGATTCATTACATATTGTTA+TGG - chr5_4:63835453-63835472 Msa0863800:intron 20.0%
!!! ATATGTTGATAATACTTATC+TGG - chr5_4:63835536-63835555 Msa0863800:intron 20.0%
!!! TATGTTGATAATACTTATCT+GGG - chr5_4:63835537-63835556 Msa0863800:intron 20.0%
!!! ACATTTTCACATTAAATTTC+AGG + chr5_4:63835893-63835912 None:intergenic 20.0%
!!! GTGTCTTGAATATATTTTAT+AGG - chr5_4:63836034-63836053 Msa0863800:intron 20.0%
!! AATATAACTGAATTCAAACT+GGG + chr5_4:63836213-63836232 None:intergenic 20.0%
!! AAATATAACTGAATTCAAAC+TGG + chr5_4:63836214-63836233 None:intergenic 20.0%
!! TGCATATTAAAGATATCAAT+TGG - chr5_4:63836819-63836838 Msa0863800:CDS 20.0%
!! ATTTAAGCAAATATTTGTAC+AGG + chr5_4:63836971-63836990 None:intergenic 20.0%
!! ATTATTGTAGATACATGTTT+AGG - chr5_4:63836989-63837008 Msa0863800:CDS 20.0%
!!! TCCTTTTTTTAATTGCTAAA+TGG - chr5_4:63837255-63837274 Msa0863800:intron 20.0%
!!! CCTTTTTTTAATTGCTAAAT+GGG - chr5_4:63837256-63837275 Msa0863800:intron 20.0%
!!! CTTTTTTTAATTGCTAAATG+GGG - chr5_4:63837257-63837276 Msa0863800:intron 20.0%
!! TCAAAATTGTTAGACATTAT+TGG + chr5_4:63837362-63837381 None:intergenic 20.0%
!! AATGTTCTTTAATGAAAACT+TGG + chr5_4:63837711-63837730 None:intergenic 20.0%
!! TGGAAAATGAAATAAAAAAG+TGG + chr5_4:63837874-63837893 None:intergenic 20.0%
!! ATAACAATAAATTGTGATAC+TGG + chr5_4:63838004-63838023 None:intergenic 20.0%
!! TTCAAAATCAACTTAATCAT+TGG + chr5_4:63838035-63838054 None:intergenic 20.0%
!! AAAATATGTTTCTTCTCTTT+CGG + chr5_4:63838327-63838346 None:intergenic 20.0%
!!! CATTTTCTTTTCACAATTTT+TGG + chr5_4:63838599-63838618 None:intergenic 20.0%
!! CAAAAATTGTGAAAAGAAAA+TGG - chr5_4:63838597-63838616 Msa0863800:CDS 20.0%
!!! TTTTCCAACTAATACAAAAA+TGG + chr5_4:63838805-63838824 None:intergenic 20.0%
!! GTAAATATGACATCTTTATT+AGG + chr5_4:63838947-63838966 None:intergenic 20.0%
!! ATATTTACTATATTCATCCA+AGG - chr5_4:63838959-63838978 Msa0863800:five_prime_UTR 20.0%
!! AAAGAAAAAACATGAACATT+TGG - chr5_4:63838982-63839001 Msa0863800:five_prime_UTR 20.0%
! AAATTGGAATTGGGAAATTA+GGG + chr5_4:63830811-63830830 None:intergenic 25.0%
! AAAATTGGAATTGGGAAATT+AGG + chr5_4:63830812-63830831 None:intergenic 25.0%
!!! GAAAATTTTGGTTAACTGAA+AGG + chr5_4:63830836-63830855 None:intergenic 25.0%
!!! TTGCTGAATTTTGATGAAAT+TGG + chr5_4:63830931-63830950 None:intergenic 25.0%
!!! AAAATACGATTTTTAGCTTG+TGG - chr5_4:63830994-63831013 Msa0863800:three_prime_UTR 25.0%
!!! AAATACGATTTTTAGCTTGT+GGG - chr5_4:63830995-63831014 Msa0863800:three_prime_UTR 25.0%
!! GAAAGCTTTTACAATTGAAA+GGG + chr5_4:63831201-63831220 None:intergenic 25.0%
!! TGAAAGCTTTTACAATTGAA+AGG + chr5_4:63831202-63831221 None:intergenic 25.0%
! TGTAAACTTCAAATTAGCAT+CGG + chr5_4:63831335-63831354 None:intergenic 25.0%
!! GAAGTTTACAAATGAAGTTT+TGG - chr5_4:63831345-63831364 Msa0863800:intron 25.0%
!!! TATTGGAAAGTGTATACTTT+TGG - chr5_4:63831471-63831490 Msa0863800:CDS 25.0%
! AATATAGTGTAGTTCGTAAA+AGG - chr5_4:63831705-63831724 Msa0863800:intron 25.0%
! AACATTATTCGTGATGATAT+GGG - chr5_4:63831779-63831798 Msa0863800:intron 25.0%
! ACTCATAATCCTAAACAAAT+GGG - chr5_4:63832097-63832116 Msa0863800:intron 25.0%
! ACTCATAATCCTAAACAAAT+GGG - chr5_4:63832097-63832116 Msa0863800:intron 25.0%
! GGCACAAATATATGTATATA+AGG + chr5_4:63832327-63832346 None:intergenic 25.0%
! GCATGATTTGATTGTAATAT+TGG - chr5_4:63832423-63832442 Msa0863800:intron 25.0%
! AAAACAAACAAAATTCTCAG+AGG + chr5_4:63832585-63832604 None:intergenic 25.0%
! GAAGTAACATATCTAATGTA+CGG + chr5_4:63832627-63832646 None:intergenic 25.0%
! GTTACTTCCTATGATTAATA+TGG - chr5_4:63832639-63832658 Msa0863800:intron 25.0%
! TAGTCAACCATATTAATCAT+AGG + chr5_4:63832649-63832668 None:intergenic 25.0%
!! AAGCTTTATATGTCAAATTC+TGG + chr5_4:63833159-63833178 None:intergenic 25.0%
! TATCACCAATTTGTGAAAAA+AGG - chr5_4:63833187-63833206 Msa0863800:intron 25.0%
!! ATCTTTTAGTGAATAGACAA+AGG - chr5_4:63833221-63833240 Msa0863800:intron 25.0%
!! TCTTTTAGTGAATAGACAAA+GGG - chr5_4:63833222-63833241 Msa0863800:intron 25.0%
! ATTTCGGACAAAAAGTTTAT+GGG + chr5_4:63833473-63833492 None:intergenic 25.0%
! GTTTATCTTCTTAATTCTCA+TGG - chr5_4:63833603-63833622 Msa0863800:CDS 25.0%
! AAATACACGTAGTTCATTAT+CGG + chr5_4:63833658-63833677 None:intergenic 25.0%
! ACGTATATTATACTTACAAG+AGG + chr5_4:63833709-63833728 None:intergenic 25.0%
! AATTGTTACCTTTCTTTCAA+TGG - chr5_4:63834078-63834097 Msa0863800:CDS 25.0%
! ATTGTTACCTTTCTTTCAAT+GGG - chr5_4:63834079-63834098 Msa0863800:CDS 25.0%
! AATGTATGAGAGATTAAATG+GGG - chr5_4:63834336-63834355 Msa0863800:intron 25.0%
! CATTCAATAAATGATGTATG+TGG - chr5_4:63834532-63834551 Msa0863800:intron 25.0%
! CATTCAATAAATGATGTATG+TGG + chr5_4:63834532-63834551 None:intergenic 25.0%
!!! ATGTTTACTTTTCATAACCA+AGG + chr5_4:63834646-63834665 None:intergenic 25.0%
! TTGGTTATGAAAAGTAAACA+TGG - chr5_4:63834645-63834664 Msa0863800:intron 25.0%
!! CAACCTTTTACTATTATAGA+TGG - chr5_4:63834710-63834729 Msa0863800:intron 25.0%
! AGACCATCTATAATAGTAAA+AGG + chr5_4:63834716-63834735 None:intergenic 25.0%
!! CAAAAGTAAAATAGGGTATT+TGG - chr5_4:63834804-63834823 Msa0863800:intron 25.0%
!! AATATTGTAGGTCTTATAGA+TGG + chr5_4:63834942-63834961 None:intergenic 25.0%
! ATAAGACCTACAATATTGTA+TGG - chr5_4:63834945-63834964 Msa0863800:intron 25.0%
! TAAGACCTACAATATTGTAT+GGG - chr5_4:63834946-63834965 Msa0863800:intron 25.0%
!!! ACTGAACTTACTTTTTCTAT+AGG + chr5_4:63834995-63835014 None:intergenic 25.0%
! TACAAAATGTTGTCAAATAG+CGG - chr5_4:63835134-63835153 Msa0863800:intron 25.0%
! GATTTCATTTCTAATACTAC+TGG + chr5_4:63835251-63835270 None:intergenic 25.0%
!!! TTTTCTTTAGTTTAGCTCTA+CGG + chr5_4:63835397-63835416 None:intergenic 25.0%
!! AAGAACAGGTGATTAATTTT+GGG - chr5_4:63835729-63835748 Msa0863800:intron 25.0%
!!! GTAGAGACAATTTTTTACAA+CGG + chr5_4:63835844-63835863 None:intergenic 25.0%
!!! CAACGTGTTGATAATATAAT+GGG - chr5_4:63836290-63836309 Msa0863800:intron 25.0%
!! GTAGATTTTACTACTGTTAT+TGG - chr5_4:63836357-63836376 Msa0863800:intron 25.0%
! AACTATGAGATTGGATTAAT+CGG + chr5_4:63836397-63836416 None:intergenic 25.0%
! ACATCGAAATTGAATTAACA+TGG - chr5_4:63836532-63836551 Msa0863800:intron 25.0%
! ATTAACATGGTGCATAATAT+TGG - chr5_4:63836545-63836564 Msa0863800:intron 25.0%
! AATTTATTGCAACCAAAATC+AGG + chr5_4:63837157-63837176 None:intergenic 25.0%
!! ATTTTGCCAATGATTTTATG+TGG - chr5_4:63837200-63837219 Msa0863800:intron 25.0%
! CCCATTTAGCAATTAAAAAA+AGG + chr5_4:63837259-63837278 None:intergenic 25.0%
! AAATATACAGAACTATTGCT+GGG + chr5_4:63837585-63837604 None:intergenic 25.0%
!! GTATATTTGCATCTGATTTT+TGG - chr5_4:63837656-63837675 Msa0863800:intron 25.0%
! CTAATATGTAAATGCATGTA+TGG + chr5_4:63837894-63837913 None:intergenic 25.0%
!! TATATCAGTGCTTGAAATTT+TGG - chr5_4:63837920-63837939 Msa0863800:intron 25.0%
! TTTAAAAGGAAAACCTGATT+GGG + chr5_4:63837970-63837989 None:intergenic 25.0%
! GGTAATCTTGTCAAAATATA+GGG + chr5_4:63838114-63838133 None:intergenic 25.0%
! TGGTAATCTTGTCAAAATAT+AGG + chr5_4:63838115-63838134 None:intergenic 25.0%
!! TTACCAATGTTTAAGATTTG+CGG - chr5_4:63838129-63838148 Msa0863800:intron 25.0%
!! GTGGTTACTTTATTATTTCA+GGG - chr5_4:63838165-63838184 Msa0863800:CDS 25.0%
!! GAAACATATTTTCAAACTTG+AGG - chr5_4:63838335-63838354 Msa0863800:CDS 25.0%
! TAATGAATATGTAGTTGATC+AGG - chr5_4:63838697-63838716 Msa0863800:CDS 25.0%
!! TTCTTTTTATGGAAGAACAT+TGG + chr5_4:63838854-63838873 None:intergenic 25.0%
! AACTATTAAGAAAGCTAGAA+AGG - chr5_4:63839012-63839031 Msa0863800:five_prime_UTR 25.0%
! ACAAATAGTATTTCACTTCT+AGG + chr5_4:63839038-63839057 None:intergenic 25.0%
TGAAAGGGAAAATTGGAATT+GGG + chr5_4:63830820-63830839 None:intergenic 30.0%
TCAGCAAAATATTCCAAGTT+CGG - chr5_4:63830944-63830963 Msa0863800:three_prime_UTR 30.0%
AAATTTGGAAAAACCGAACT+TGG + chr5_4:63830960-63830979 None:intergenic 30.0%
!!! AATACGATTTTTAGCTTGTG+GGG - chr5_4:63830996-63831015 Msa0863800:three_prime_UTR 30.0%
!! AGCTTTCATCTTTCAAGTTA+TGG - chr5_4:63831214-63831233 Msa0863800:CDS 30.0%
!!! TACTTTTGGTTAAGAGTACT+TGG - chr5_4:63831485-63831504 Msa0863800:CDS 30.0%
GCAAATTCTTCGTTTGTTTA+AGG - chr5_4:63831519-63831538 Msa0863800:CDS 30.0%
TAAGGAACAAGGATTGTTAT+TGG - chr5_4:63831537-63831556 Msa0863800:CDS 30.0%
!!! ATTGTTATTGGCTTTGCTTT+TGG - chr5_4:63831549-63831568 Msa0863800:CDS 30.0%
!!! TTGTTATTGGCTTTGCTTTT+GGG - chr5_4:63831550-63831569 Msa0863800:CDS 30.0%
TGTATGGCATTGTTCAATAT+AGG - chr5_4:63831675-63831694 Msa0863800:intron 30.0%
GAACATTATTCGTGATGATA+TGG - chr5_4:63831778-63831797 Msa0863800:intron 30.0%
!!! GTTTGAGACACCAATTTTTT+TGG - chr5_4:63831922-63831941 Msa0863800:CDS 30.0%
!!! TTTTGGTTTTGTTGAAGTGA+TGG - chr5_4:63831939-63831958 Msa0863800:CDS 30.0%
!!! TTTGGTTTTGTTGAAGTGAT+GGG - chr5_4:63831940-63831959 Msa0863800:CDS 30.0%
GACTCATAATCCTAAACAAA+TGG - chr5_4:63832096-63832115 Msa0863800:intron 30.0%
CTAAACAAATGGGTAAATCT+GGG - chr5_4:63832107-63832126 Msa0863800:intron 30.0%
GACTCATAATCCTAAACAAA+TGG - chr5_4:63832096-63832115 Msa0863800:intron 30.0%
CTAAACAAATGGGTAAATCT+GGG - chr5_4:63832107-63832126 Msa0863800:intron 30.0%
AAGTTACTAAAGCAAGACAA+TGG + chr5_4:63832348-63832367 None:intergenic 30.0%
ATTGTCTTGCTTTAGTAACT+TGG - chr5_4:63832347-63832366 Msa0863800:intron 30.0%
TAATTTCCTTGCCAACAAAT+AGG + chr5_4:63832517-63832536 None:intergenic 30.0%
AACAAAATTCTCAGAGGAAA+AGG + chr5_4:63832579-63832598 None:intergenic 30.0%
!!! ACTGTTGATGACAATGTTTT+AGG - chr5_4:63832695-63832714 Msa0863800:intron 30.0%
! TATGTTTTCTTGTTCTTGCT+TGG - chr5_4:63832999-63833018 Msa0863800:intron 30.0%
CTTGCTTGGATATTAATAAC+AGG - chr5_4:63833013-63833032 Msa0863800:intron 30.0%
AACATAAACTCAGATTCACT+AGG - chr5_4:63833043-63833062 Msa0863800:intron 30.0%
! TATTCACTAAAAGATTAGCC+CGG + chr5_4:63833216-63833235 None:intergenic 30.0%
! CTTTTAGTGAATAGACAAAG+GGG - chr5_4:63833223-63833242 Msa0863800:intron 30.0%
GAAAATCCTACATCCTATAA+TGG + chr5_4:63833315-63833334 None:intergenic 30.0%
GATTTCGGACAAAAAGTTTA+TGG + chr5_4:63833474-63833493 None:intergenic 30.0%
! GGTATGAGCAATGATATTTT+TGG + chr5_4:63833520-63833539 None:intergenic 30.0%
ATTGAAGCTACAAATTCGTT+GGG - chr5_4:63833565-63833584 Msa0863800:intron 30.0%
AAGTTGAAAAAGAAATGCCA+TGG + chr5_4:63833969-63833988 None:intergenic 30.0%
TTGTTACCTTTCTTTCAATG+GGG - chr5_4:63834080-63834099 Msa0863800:CDS 30.0%
CTTAAATTGCTTGGCTTAAA+AGG - chr5_4:63834106-63834125 Msa0863800:intron 30.0%
TACAAGAGAATATTAATGGC+TGG + chr5_4:63834155-63834174 None:intergenic 30.0%
TAGAAAATGCAGAGTTATCA+TGG + chr5_4:63834294-63834313 None:intergenic 30.0%
! AAGTTACTTTATTGATCGTG+AGG - chr5_4:63834364-63834383 Msa0863800:intron 30.0%
! AGTTACTTTATTGATCGTGA+GGG - chr5_4:63834365-63834384 Msa0863800:intron 30.0%
TGTAATCTGGTCAAATCATA+TGG - chr5_4:63834434-63834453 Msa0863800:intron 30.0%
! AAGTTTCTTACATTTGAGAC+CGG + chr5_4:63834604-63834623 None:intergenic 30.0%
! AAGTTTCTTACATTTGAGAC+CGG - chr5_4:63834604-63834623 Msa0863800:intron 30.0%
ATGCTTACTCTATGTTGATA+CGG - chr5_4:63834748-63834767 Msa0863800:intron 30.0%
! TATTTGGAATGTAAGCTCTT+CGG - chr5_4:63834820-63834839 Msa0863800:intron 30.0%
TTGAATCTGTGATAGGAAAA+AGG - chr5_4:63834885-63834904 Msa0863800:intron 30.0%
GGTAAATTCCTTTGTAGAAA+AGG - chr5_4:63835288-63835307 Msa0863800:intron 30.0%
!! TTTTAAAAGCAGCGATTAAG+AGG - chr5_4:63835339-63835358 Msa0863800:intron 30.0%
TTTAAAAGCAGCGATTAAGA+GGG - chr5_4:63835340-63835359 Msa0863800:intron 30.0%
! ATTTGTTGAAGCAATGATCT+TGG - chr5_4:63835571-63835590 Msa0863800:intron 30.0%
TTTGTTGAAGCAATGATCTT+GGG - chr5_4:63835572-63835591 Msa0863800:intron 30.0%
! GAAGAACAGGTGATTAATTT+TGG - chr5_4:63835728-63835747 Msa0863800:intron 30.0%
!!! TGTGCTCTTTGTTTTAGTAA+TGG - chr5_4:63835910-63835929 Msa0863800:CDS 30.0%
! AATCAAATGGCTTTTGTAAG+TGG + chr5_4:63835961-63835980 None:intergenic 30.0%
ACAAGTGATGAAAATCTACA+AGG + chr5_4:63836154-63836173 None:intergenic 30.0%
! TTGTAGATTTTCATCACTTG+TGG - chr5_4:63836153-63836172 Msa0863800:intron 30.0%
! TGTAGATTTTCATCACTTGT+GGG - chr5_4:63836154-63836173 Msa0863800:intron 30.0%
!! GCAACGTGTTGATAATATAA+TGG - chr5_4:63836289-63836308 Msa0863800:intron 30.0%
! AGTAAAATCTACCAACCTTT+TGG + chr5_4:63836349-63836368 None:intergenic 30.0%
AATTCTGCAAACTATGAGAT+TGG + chr5_4:63836406-63836425 None:intergenic 30.0%
TAAGATTTAGTCAAGTTACC+AGG + chr5_4:63836510-63836529 None:intergenic 30.0%
TTCTTAGAGAATTTCGAATC+AGG - chr5_4:63836620-63836639 Msa0863800:intron 30.0%
AGTTTGGTTGAATTCTAGTA+TGG + chr5_4:63836705-63836724 None:intergenic 30.0%
TACTAGAATTCAACCAAACT+CGG - chr5_4:63836705-63836724 Msa0863800:intron 30.0%
TTAGTAAATCAGAATTGCCT+TGG + chr5_4:63837087-63837106 None:intergenic 30.0%
AAGAGTTACAAGCTGTTAAA+TGG + chr5_4:63837434-63837453 None:intergenic 30.0%
AATATACAGAACTATTGCTG+GGG + chr5_4:63837584-63837603 None:intergenic 30.0%
CAAATATACAGAACTATTGC+TGG + chr5_4:63837586-63837605 None:intergenic 30.0%
!! CATTCTTTTGTTGCTATTAC+AGG - chr5_4:63837727-63837746 Msa0863800:intron 30.0%
GAGGAAATACAAAAGAAAAC+CGG - chr5_4:63837749-63837768 Msa0863800:intron 30.0%
! CTTTAAAAGGAAAACCTGAT+TGG + chr5_4:63837971-63837990 None:intergenic 30.0%
! CAATCAGGTTTTCCTTTTAA+AGG - chr5_4:63837969-63837988 Msa0863800:intron 30.0%
!!! TGGCACTTTTTTCCTTTAAA+AGG + chr5_4:63837984-63838003 None:intergenic 30.0%
ATCTTGTCAAAATATAGGGT+AGG + chr5_4:63838110-63838129 None:intergenic 30.0%
! TACCAATGTTTAAGATTTGC+GGG - chr5_4:63838130-63838149 Msa0863800:intron 30.0%
AAAGTAACCACCGTATTAAT+AGG + chr5_4:63838156-63838175 None:intergenic 30.0%
! GGTGGTTACTTTATTATTTC+AGG - chr5_4:63838164-63838183 Msa0863800:CDS 30.0%
! CATCAAGTTAGTTCTTGAAA+GGG - chr5_4:63838257-63838276 Msa0863800:CDS 30.0%
TCATTAGAAATGTCTTCATG+TGG + chr5_4:63838683-63838702 None:intergenic 30.0%
!!! TGTGCCATTTTTGTATTAGT+TGG - chr5_4:63838798-63838817 Msa0863800:five_prime_UTR 30.0%
!! TTGGTTCTCTCTTCTTTTTA+TGG + chr5_4:63838865-63838884 None:intergenic 30.0%
TTCTGCATGTTATAACTCAT+TGG + chr5_4:63838884-63838903 None:intergenic 30.0%
AACCTTTCCAAGATAAATAG+AGG - chr5_4:63838902-63838921 Msa0863800:five_prime_UTR 30.0%
ACCTTTCCAAGATAAATAGA+GGG - chr5_4:63838903-63838922 Msa0863800:five_prime_UTR 30.0%
ATAGAACCCTCTATTTATCT+TGG + chr5_4:63838912-63838931 None:intergenic 30.0%
!!! GTTCATGTTTTTTCTTTCCT+TGG + chr5_4:63838979-63838998 None:intergenic 30.0%
CTGAAAGGGAAAATTGGAAT+TGG + chr5_4:63830821-63830840 None:intergenic 35.0%
GGTTAACTGAAAGGGAAAAT+TGG + chr5_4:63830827-63830846 None:intergenic 35.0%
!! TCATTGTTTTTCACCTTCCT+CGG - chr5_4:63830885-63830904 Msa0863800:three_prime_UTR 35.0%
TACAAAGAGAATGCCAATGA+AGG - chr5_4:63831123-63831142 Msa0863800:CDS 35.0%
! AGAATGCCAATGAAGGTTTT+GGG - chr5_4:63831130-63831149 Msa0863800:CDS 35.0%
TTTGTACCCAAAACCTTCAT+TGG + chr5_4:63831139-63831158 None:intergenic 35.0%
!!! ATGAAGGTTTTGGGTACAAA+TGG - chr5_4:63831139-63831158 Msa0863800:CDS 35.0%
!!! TGAAGGTTTTGGGTACAAAT+GGG - chr5_4:63831140-63831159 Msa0863800:CDS 35.0%
AGTTGGACACAATAGGAAAA+GGG + chr5_4:63831171-63831190 None:intergenic 35.0%
!! AATGAAGTTTTGGTGAAGAG+AGG - chr5_4:63831355-63831374 Msa0863800:intron 35.0%
! GGTGAAGAGAGGAATTATTT+TGG - chr5_4:63831366-63831385 Msa0863800:intron 35.0%
CTTCAGTAGCCAAAACTTTA+GGG + chr5_4:63831426-63831445 None:intergenic 35.0%
!! AATGCTGGATATGGTGTTAT+TGG - chr5_4:63831454-63831473 Msa0863800:CDS 35.0%
CTTCGTTTGTTTAAGGAACA+AGG - chr5_4:63831526-63831545 Msa0863800:CDS 35.0%
AGACTTCGATTACTACACTT+TGG - chr5_4:63831599-63831618 Msa0863800:intron 35.0%
CAAACAGTTAGATAGCAGAT+GGG + chr5_4:63831907-63831926 None:intergenic 35.0%
TCAAACAGTTAGATAGCAGA+TGG + chr5_4:63831908-63831927 None:intergenic 35.0%
AGTCTTACATCCCAATATAC+AGG + chr5_4:63832080-63832099 None:intergenic 35.0%
CCAGATTTACCCATTTGTTT+AGG + chr5_4:63832109-63832128 None:intergenic 35.0%
CCTAAACAAATGGGTAAATC+TGG - chr5_4:63832106-63832125 Msa0863800:intron 35.0%
AGTCTTACATCCCAATATAC+AGG + chr5_4:63832080-63832099 None:intergenic 35.0%
CCAGATTTACCCATTTGTTT+AGG + chr5_4:63832109-63832128 None:intergenic 35.0%
CCTAAACAAATGGGTAAATC+TGG - chr5_4:63832106-63832125 Msa0863800:intron 35.0%
TAACTAGTATTCACCTTCAG+TGG + chr5_4:63832382-63832401 None:intergenic 35.0%
GAGGAAAAGGAACTATAGTA+TGG + chr5_4:63832566-63832585 None:intergenic 35.0%
!!! AATGTTTTAGGTTCGTGAGT+TGG - chr5_4:63832707-63832726 Msa0863800:intron 35.0%
TTCCTCACAACCATACTTAT+TGG - chr5_4:63832786-63832805 Msa0863800:intron 35.0%
ATACGTTGTGCCAATAAGTA+TGG + chr5_4:63832799-63832818 None:intergenic 35.0%
CAGGAGTTTGCAAGTTTAAT+GGG + chr5_4:63833124-63833143 None:intergenic 35.0%
TCAGGAGTTTGCAAGTTTAA+TGG + chr5_4:63833125-63833144 None:intergenic 35.0%
!! AATTTGTGAAAAAAGGTGCC+CGG - chr5_4:63833194-63833213 Msa0863800:intron 35.0%
! ATTCACTAAAAGATTAGCCC+GGG + chr5_4:63833215-63833234 None:intergenic 35.0%
TATCCACATGTCAGCAATTT+AGG - chr5_4:63833287-63833306 Msa0863800:CDS 35.0%
AGCAATTTAGGCACCATTAT+AGG - chr5_4:63833299-63833318 Msa0863800:CDS 35.0%
GATTGAAGCTACAAATTCGT+TGG - chr5_4:63833564-63833583 Msa0863800:intron 35.0%
CTTCTCTCTGTAATCATACA+AGG - chr5_4:63833781-63833800 Msa0863800:intron 35.0%
GATTTCAGTGAGAAGCAAAA+TGG + chr5_4:63833810-63833829 None:intergenic 35.0%
!!! TTTGTTTGTTTTGCACACCA+TGG - chr5_4:63833949-63833968 Msa0863800:intron 35.0%
!! AATTTTAATGCCTCTAGGTC+AGG - chr5_4:63834014-63834033 Msa0863800:intron 35.0%
AATGCATCCGCTTAATGAAA+GGG + chr5_4:63834252-63834271 None:intergenic 35.0%
AAATGCATCCGCTTAATGAA+AGG + chr5_4:63834253-63834272 None:intergenic 35.0%
TATGTATGGTAGCTGTTAGA+TGG - chr5_4:63834391-63834410 Msa0863800:intron 35.0%
!! AGATGGTTGGTTACAGTTTT+TGG - chr5_4:63834408-63834427 Msa0863800:intron 35.0%
!! GATGGTTGGTTACAGTTTTT+GGG - chr5_4:63834409-63834428 Msa0863800:intron 35.0%
!!! CAGTTTTTGGGTTTGTAATC+TGG - chr5_4:63834421-63834440 Msa0863800:intron 35.0%
AGGATAAAAAATACTCCCTC+CGG + chr5_4:63834626-63834645 None:intergenic 35.0%
!!! GAGGGAGTATTTTTTATCCT+TGG - chr5_4:63834626-63834645 Msa0863800:intron 35.0%
! ATTTGGAATGTAAGCTCTTC+GGG - chr5_4:63834821-63834840 Msa0863800:intron 35.0%
ACACAGTTAGAGGTGAAAAT+TGG - chr5_4:63834848-63834867 Msa0863800:intron 35.0%
GAAAATTGGAGAAAGACTTC+AGG - chr5_4:63834862-63834881 Msa0863800:intron 35.0%
TCAGTCCCATACAATATTGT+AGG + chr5_4:63834954-63834973 None:intergenic 35.0%
CAGAGATGAGAATATTGCAA+TGG - chr5_4:63835016-63835035 Msa0863800:intron 35.0%
ATTGCAATGGATAAGCAGTT+TGG - chr5_4:63835029-63835048 Msa0863800:intron 35.0%
TTGGGGATCATGAAAAATTG+TGG + chr5_4:63835195-63835214 None:intergenic 35.0%
!! TATCCAAAGTGTTGTCGATT+GGG + chr5_4:63835213-63835232 None:intergenic 35.0%
!! TTATCCAAAGTGTTGTCGAT+TGG + chr5_4:63835214-63835233 None:intergenic 35.0%
! ATCTGCAACCTTTTCTACAA+AGG + chr5_4:63835299-63835318 None:intergenic 35.0%
AACAGAAGCCTTTATTCACT+AGG + chr5_4:63835507-63835526 None:intergenic 35.0%
!! TTTTCTCTAGAGGAGAGAAA+GGG + chr5_4:63835801-63835820 None:intergenic 35.0%
!! ATTTTCTCTAGAGGAGAGAA+AGG + chr5_4:63835802-63835821 None:intergenic 35.0%
GGATATGATCGAAAATGTGT+TGG - chr5_4:63836055-63836074 Msa0863800:intron 35.0%
ATTGCAACAACATCAACAAG+AGG + chr5_4:63836116-63836135 None:intergenic 35.0%
TGTATCATGACATGTTTCCT+AGG - chr5_4:63836252-63836271 Msa0863800:intron 35.0%
GTATCATGACATGTTTCCTA+GGG - chr5_4:63836253-63836272 Msa0863800:intron 35.0%
!! ACTCTAGAAAGTATCACAGT+TGG - chr5_4:63836453-63836472 Msa0863800:intron 35.0%
AAGTATCACAGTTGGAGATT+TGG - chr5_4:63836461-63836480 Msa0863800:intron 35.0%
TTACCAGGTACAAAATATGC+AGG + chr5_4:63836495-63836514 None:intergenic 35.0%
AACAGACATTGAATCTGCAA+AGG + chr5_4:63836593-63836612 None:intergenic 35.0%
TTGCAGATTCAATGTCTGTT+TGG - chr5_4:63836593-63836612 Msa0863800:intron 35.0%
TAGAGAATTTCGAATCAGGA+AGG - chr5_4:63836624-63836643 Msa0863800:intron 35.0%
ACACTGCAAAGTATAACTGT+AGG - chr5_4:63836786-63836805 Msa0863800:CDS 35.0%
ATTGGAACATGCTATCACTA+TGG - chr5_4:63836837-63836856 Msa0863800:CDS 35.0%
TTGGAACATGCTATCACTAT+GGG - chr5_4:63836838-63836857 Msa0863800:CDS 35.0%
TTCTCTACTTTCTGATTCCA+AGG - chr5_4:63837067-63837086 Msa0863800:intron 35.0%
AACAGAAAGATGAGAACAGA+AGG + chr5_4:63837123-63837142 None:intergenic 35.0%
AACCAAAATCAGGAAAGCTA+GGG + chr5_4:63837147-63837166 None:intergenic 35.0%
AGGATGCCACATAAAATCAT+TGG + chr5_4:63837209-63837228 None:intergenic 35.0%
ATTATTGGCAGATCACAGAA+TGG + chr5_4:63837347-63837366 None:intergenic 35.0%
AACTCTTGAAGATGTTGTTG+AGG - chr5_4:63837447-63837466 Msa0863800:intron 35.0%
GATGTTGTTGAGGAAATTGT+TGG - chr5_4:63837457-63837476 Msa0863800:intron 35.0%
ATTCGATGAAAATGACTCGA+AGG - chr5_4:63837486-63837505 Msa0863800:intron 35.0%
!! TCTTTTGTTGCTATTACAGG+AGG - chr5_4:63837730-63837749 Msa0863800:intron 35.0%
! TTTGAGATGCAAAGATGCTA+GGG + chr5_4:63838084-63838103 None:intergenic 35.0%
CCTTTCAAGAACTAACTTGA+TGG + chr5_4:63838259-63838278 None:intergenic 35.0%
! CCATCAAGTTAGTTCTTGAA+AGG - chr5_4:63838256-63838275 Msa0863800:CDS 35.0%
ATCGATGATATTGTCCCTTA+TGG - chr5_4:63838374-63838393 Msa0863800:CDS 35.0%
! CTTGTTACTTCACACAGATT+CGG + chr5_4:63838444-63838463 None:intergenic 35.0%
CGGTTTGAAAGATTACATAG+TGG - chr5_4:63838533-63838552 Msa0863800:CDS 35.0%
GTGAAAAGAAAATGGAACAG+TGG - chr5_4:63838605-63838624 Msa0863800:CDS 35.0%
ACCCTCTATTTATCTTGGAA+AGG + chr5_4:63838907-63838926 None:intergenic 35.0%
GAAGAGAATGGGAATTGAGA+AGG + chr5_4:63830779-63830798 None:intergenic 40.0%
GGTTTGAGAAGGAAGAGAAT+GGG + chr5_4:63830790-63830809 None:intergenic 40.0%
TGGGAAATTAGGGTTTGAGA+AGG + chr5_4:63830801-63830820 None:intergenic 40.0%
TTAGCAATGACACTCGAATC+AGG - chr5_4:63831037-63831056 Msa0863800:CDS 40.0%
TAGCAATGACACTCGAATCA+GGG - chr5_4:63831038-63831057 Msa0863800:CDS 40.0%
! GGGTCATCGAGTTTTCATTT+CGG - chr5_4:63831066-63831085 Msa0863800:CDS 40.0%
! GGTCATCGAGTTTTCATTTC+GGG - chr5_4:63831067-63831086 Msa0863800:CDS 40.0%
TTGTACGATTCTCATGCACA+GGG + chr5_4:63831108-63831127 None:intergenic 40.0%
TTTGTACGATTCTCATGCAC+AGG + chr5_4:63831109-63831128 None:intergenic 40.0%
! GAGAATGCCAATGAAGGTTT+TGG - chr5_4:63831129-63831148 Msa0863800:CDS 40.0%
CAGTTGGACACAATAGGAAA+AGG + chr5_4:63831172-63831191 None:intergenic 40.0%
AGCTTGAAGGTGAAGTGTAT+TGG - chr5_4:63831265-63831284 Msa0863800:intron 40.0%
! AAGGTGAAGTGTATTGGTAG+TGG - chr5_4:63831271-63831290 Msa0863800:intron 40.0%
!!! ATTTTGGCTGCTACTGTTTG+TGG - chr5_4:63831382-63831401 Msa0863800:intron 40.0%
!! TTTTGGCTGCTACTGTTTGT+GGG - chr5_4:63831383-63831402 Msa0863800:intron 40.0%
! GTTTGGATGCCCTAAAGTTT+TGG - chr5_4:63831414-63831433 Msa0863800:intron 40.0%
CCTTCAGTAGCCAAAACTTT+AGG + chr5_4:63831427-63831446 None:intergenic 40.0%
!!! CCTAAAGTTTTGGCTACTGA+AGG - chr5_4:63831424-63831443 Msa0863800:CDS 40.0%
!!! TCTTTCGGCTTTTTTCTCTC+TGG - chr5_4:63831573-63831592 Msa0863800:intron 40.0%
AATAAGCACGATACCTTCCA+AGG + chr5_4:63831625-63831644 None:intergenic 40.0%
GTTCGTAAAAGGATTGTTGC+CGG - chr5_4:63831716-63831735 Msa0863800:intron 40.0%
TTCGTAAAAGGATTGTTGCC+GGG - chr5_4:63831717-63831736 Msa0863800:intron 40.0%
! TTAGATAGCAGATGGGTTTC+TGG + chr5_4:63831900-63831919 None:intergenic 40.0%
TTAGCGACTCACCTATTTGT+TGG - chr5_4:63832503-63832522 Msa0863800:intron 40.0%
GCTGAAAAGGAGTCTGAAAA+TGG - chr5_4:63832729-63832748 Msa0863800:intron 40.0%
TACTCCGAAGTGATGTTACT+CGG - chr5_4:63832763-63832782 Msa0863800:intron 40.0%
TGCCAATAAGTATGGTTGTG+AGG + chr5_4:63832791-63832810 None:intergenic 40.0%
TCGATAAGTTGTATGCAGTG+TGG - chr5_4:63832886-63832905 Msa0863800:intron 40.0%
AAATATTGCAGCAACTGCTC+TGG - chr5_4:63832910-63832929 Msa0863800:intron 40.0%
!!! GGGCACCTTTTTTCACAAAT+TGG + chr5_4:63833195-63833214 None:intergenic 40.0%
!! ATTTGTGAAAAAAGGTGCCC+GGG - chr5_4:63833195-63833214 Msa0863800:intron 40.0%
TTAGTGAATAGACAAAGGGG+CGG - chr5_4:63833226-63833245 Msa0863800:intron 40.0%
TAGGCACCATTATAGGATGT+AGG - chr5_4:63833306-63833325 Msa0863800:CDS 40.0%
ATCACAAAACCTTACCCTGA+CGG - chr5_4:63833436-63833455 Msa0863800:CDS 40.0%
AAAAAGAAACCGTCAGGGTA+AGG + chr5_4:63833448-63833467 None:intergenic 40.0%
!! AATCACTCCAAAAAGCATCG+CGG - chr5_4:63833826-63833845 Msa0863800:intron 40.0%
! TTATGAACCGCGATGCTTTT+TGG + chr5_4:63833836-63833855 None:intergenic 40.0%
AAGGTAACAATTCTTCCTGC+AGG + chr5_4:63834070-63834089 None:intergenic 40.0%
AAGCATCCCCATTGAAAGAA+AGG + chr5_4:63834089-63834108 None:intergenic 40.0%
ATGGGGATGCTTAAATTGCT+TGG - chr5_4:63834097-63834116 Msa0863800:CDS 40.0%
TGCTTGGCTTAAAAGGAAGT+AGG - chr5_4:63834113-63834132 Msa0863800:intron 40.0%
TCTTAGCCCCTTTCATTAAG+CGG - chr5_4:63834242-63834261 Msa0863800:intron 40.0%
ATGCATCCGCTTAATGAAAG+GGG + chr5_4:63834251-63834270 None:intergenic 40.0%
!! GATCGTGAGGGTTTTATGTA+TGG - chr5_4:63834377-63834396 Msa0863800:intron 40.0%
TATGGTAGCTGTTAGATGGT+TGG - chr5_4:63834395-63834414 Msa0863800:intron 40.0%
TGGTCAAATCATATGGCACA+AGG - chr5_4:63834441-63834460 Msa0863800:intron 40.0%
GTTTCTTTATGTACTCCCTC+CGG - chr5_4:63834475-63834494 Msa0863800:intron 40.0%
! TTCTTACATTTGAGACCGGA+GGG + chr5_4:63834608-63834627 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG + chr5_4:63834607-63834626 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG - chr5_4:63834607-63834626 Msa0863800:intron 40.0%
! TTCTTACATTTGAGACCGGA+GGG - chr5_4:63834608-63834627 Msa0863800:intron 40.0%
TAAGCTCGTAGCATAATGAG+TGG - chr5_4:63834682-63834701 Msa0863800:intron 40.0%
TGTTGATACGGAGCAAACAT+TGG - chr5_4:63834760-63834779 Msa0863800:intron 40.0%
!! CTTCAGGTTGAATCTGTGAT+AGG - chr5_4:63834878-63834897 Msa0863800:intron 40.0%
TAAGCAGTTTGGTCAACTAG+CGG - chr5_4:63835040-63835059 Msa0863800:intron 40.0%
AACTAGCGGCTATAGATTAG+TGG - chr5_4:63835054-63835073 Msa0863800:intron 40.0%
ACTTTAGCTATGACGAGTAG+CGG - chr5_4:63835158-63835177 Msa0863800:intron 40.0%
!! ATCCAAAGTGTTGTCGATTG+GGG + chr5_4:63835212-63835231 None:intergenic 40.0%
GTAGAAAAGGTTGCAGATGT+AGG - chr5_4:63835301-63835320 Msa0863800:intron 40.0%
AAGGTTGCAGATGTAGGATA+TGG - chr5_4:63835307-63835326 Msa0863800:intron 40.0%
GCATCAGACTATCCTACATT+TGG + chr5_4:63835370-63835389 None:intergenic 40.0%
ATGTAGGATAGTCTGATGCT+AGG - chr5_4:63835371-63835390 Msa0863800:intron 40.0%
CTTTATTCACTAGGTGAGGT+TGG + chr5_4:63835498-63835517 None:intergenic 40.0%
CAACCTCACCTAGTGAATAA+AGG - chr5_4:63835496-63835515 Msa0863800:intron 40.0%
AAGCCTTTATTCACTAGGTG+AGG + chr5_4:63835502-63835521 None:intergenic 40.0%
TGAGCCATATGTAACTGAAG+AGG - chr5_4:63835655-63835674 Msa0863800:CDS 40.0%
AGCTCCTCTTCAGTTACATA+TGG + chr5_4:63835662-63835681 None:intergenic 40.0%
AGGAGCTAAAACTGATGCTA+AGG - chr5_4:63835675-63835694 Msa0863800:CDS 40.0%
GGAGCTAAAACTGATGCTAA+GGG - chr5_4:63835676-63835695 Msa0863800:CDS 40.0%
GAGCTAAAACTGATGCTAAG+GGG - chr5_4:63835677-63835696 Msa0863800:CDS 40.0%
AGCAATAGAAGAGGAAGAAC+AGG - chr5_4:63835715-63835734 Msa0863800:CDS 40.0%
GGGTTACACATCAATACTCA+AGG - chr5_4:63836174-63836193 Msa0863800:intron 40.0%
CATGATACAGTTAGCACACT+GGG + chr5_4:63836241-63836260 None:intergenic 40.0%
TCATGATACAGTTAGCACAC+TGG + chr5_4:63836242-63836261 None:intergenic 40.0%
TCAACACGTTGCTCAAAAAC+AGG + chr5_4:63836281-63836300 None:intergenic 40.0%
AATGGGTATAGCATATGCGA+TGG - chr5_4:63836307-63836326 Msa0863800:intron 40.0%
TCTGCTGGATTATGTCCAAA+AGG - chr5_4:63836331-63836350 Msa0863800:intron 40.0%
CTGGATTATGTCCAAAAGGT+TGG - chr5_4:63836335-63836354 Msa0863800:intron 40.0%
! AAGCCTGCATATTTTGTACC+TGG - chr5_4:63836489-63836508 Msa0863800:intron 40.0%
GCTGTCGTTCTTAATGAGTA+TGG - chr5_4:63836655-63836674 Msa0863800:intron 40.0%
GTCGTTCTTAATGAGTATGG+TGG - chr5_4:63836658-63836677 Msa0863800:intron 40.0%
! AATGAGTATGGTGGAACTGT+TGG - chr5_4:63836667-63836686 Msa0863800:intron 40.0%
! ATGAGTATGGTGGAACTGTT+GGG - chr5_4:63836668-63836687 Msa0863800:intron 40.0%
CAAACAAACTGATCCGAGTT+TGG + chr5_4:63836721-63836740 None:intergenic 40.0%
CAACCAAAATCAGGAAAGCT+AGG + chr5_4:63837148-63837167 None:intergenic 40.0%
TACATAGTAATGCGAGCTGA+GGG - chr5_4:63837773-63837792 Msa0863800:intron 40.0%
! GTCTTCTGAGAGTTGATCAA+TGG + chr5_4:63837825-63837844 None:intergenic 40.0%
ATAAAAAAGTGGCGAACCTC+TGG + chr5_4:63837863-63837882 None:intergenic 40.0%
CTTTATTACAGCACCCAATC+AGG - chr5_4:63837954-63837973 Msa0863800:intron 40.0%
! GTTTGAGATGCAAAGATGCT+AGG + chr5_4:63838085-63838104 None:intergenic 40.0%
GATTTGCGGGCCTATTAATA+CGG - chr5_4:63838143-63838162 Msa0863800:intron 40.0%
AAGCCTTTGGTTACATTCCA+AGG - chr5_4:63838223-63838242 Msa0863800:CDS 40.0%
TGTCCTTGGAATGTAACCAA+AGG + chr5_4:63838229-63838248 None:intergenic 40.0%
TTTGGTTACATTCCAAGGAC+AGG - chr5_4:63838228-63838247 Msa0863800:CDS 40.0%
! ACATAGTGGTGACGAAATGT+TGG - chr5_4:63838547-63838566 Msa0863800:CDS 40.0%
AAGAAAATGGAACAGTGGTG+AGG - chr5_4:63838610-63838629 Msa0863800:CDS 40.0%
ATGTCTTCATGTGGTCTCTT+TGG + chr5_4:63838674-63838693 None:intergenic 40.0%
ATCTGACAACCAGAGCAAGT+GGG - chr5_4:63830722-63830741 Msa0863800:three_prime_UTR 45.0%
GGGTTTGAGAAGGAAGAGAA+TGG + chr5_4:63830791-63830810 None:intergenic 45.0%
TTGGTTATGAGATGCAACCG+AGG + chr5_4:63830912-63830931 None:intergenic 45.0%
AGCAATGACACTCGAATCAG+GGG - chr5_4:63831039-63831058 Msa0863800:CDS 45.0%
CCAACACAGTTGGACACAAT+AGG + chr5_4:63831178-63831197 None:intergenic 45.0%
CCTATTGTGTCCAACTGTGT+TGG - chr5_4:63831175-63831194 Msa0863800:CDS 45.0%
ATTGAAAGGGCCAACACAGT+TGG + chr5_4:63831188-63831207 None:intergenic 45.0%
TTTGGCTGCTACTGTTTGTG+GGG - chr5_4:63831384-63831403 Msa0863800:intron 45.0%
!!! AGTTTTGGCTACTGAAGGTG+TGG - chr5_4:63831429-63831448 Msa0863800:CDS 45.0%
CGAAGAATTTGCAACACCGT+CGG + chr5_4:63831511-63831530 None:intergenic 45.0%
!! GGCTTTGCTTTTGGGTCTTT+CGG - chr5_4:63831558-63831577 Msa0863800:CDS 45.0%
CGATTACTACACTTTGGCCT+TGG - chr5_4:63831605-63831624 Msa0863800:intron 45.0%
!! TACTACACTTTGGCCTTGGA+AGG - chr5_4:63831609-63831628 Msa0863800:intron 45.0%
TCGTAAAAGGATTGTTGCCG+GGG - chr5_4:63831718-63831737 Msa0863800:intron 45.0%
!!! AGTTTTGGAGGCGAGTTTTG+TGG - chr5_4:63831749-63831768 Msa0863800:intron 45.0%
!! GAGGCGAGTTTTGTGGAAAT+AGG - chr5_4:63831756-63831775 Msa0863800:intron 45.0%
! GACTCACCTATTTGTTGGCA+AGG - chr5_4:63832508-63832527 Msa0863800:intron 45.0%
GGAACCGAGTAACATCACTT+CGG + chr5_4:63832770-63832789 None:intergenic 45.0%
CTTGCAAACTCCTGATGTGA+TGG - chr5_4:63833130-63833149 Msa0863800:CDS 45.0%
! ATTCTGGTTGCCATCACATC+AGG + chr5_4:63833143-63833162 None:intergenic 45.0%
GTGCCTAAATTGCTGACATG+TGG + chr5_4:63833293-63833312 None:intergenic 45.0%
GGGTCAAAAAGAAACCGTCA+GGG + chr5_4:63833453-63833472 None:intergenic 45.0%
TGGGTCAAAAAGAAACCGTC+AGG + chr5_4:63833454-63833473 None:intergenic 45.0%
! CATACCACTCATCTGAAGCT+TGG - chr5_4:63833534-63833553 Msa0863800:intron 45.0%
CAAACCAAGCTTCAGATGAG+TGG + chr5_4:63833541-63833560 None:intergenic 45.0%
GCAGAGTTATCATGGTGCAT+GGG + chr5_4:63834286-63834305 None:intergenic 45.0%
TGCAGAGTTATCATGGTGCA+TGG + chr5_4:63834287-63834306 None:intergenic 45.0%
ACGAGCTTAACACAAGAAGG+TGG + chr5_4:63834671-63834690 None:intergenic 45.0%
GCTACGAGCTTAACACAAGA+AGG + chr5_4:63834674-63834693 None:intergenic 45.0%
AAAGGCCACTCAAGCTAAAC+TGG - chr5_4:63834903-63834922 Msa0863800:intron 45.0%
!! AGCTTCCAGTTTAGCTTGAG+TGG + chr5_4:63834911-63834930 None:intergenic 45.0%
GGGACTGAAACTTGAGCAAT+AGG - chr5_4:63834966-63834985 Msa0863800:intron 45.0%
ATCCCCAATCGACAACACTT+TGG - chr5_4:63835207-63835226 Msa0863800:intron 45.0%
AAAGCAGCGATTAAGAGGGT+AGG - chr5_4:63835344-63835363 Msa0863800:intron 45.0%
TAAGAGGGTAGGCCAAATGT+AGG - chr5_4:63835355-63835374 Msa0863800:intron 45.0%
ACTAGGTGAGGTTGGCAATA+TGG + chr5_4:63835490-63835509 None:intergenic 45.0%
TGCTCAAAAACAGGAACCCT+AGG + chr5_4:63836272-63836291 None:intergenic 45.0%
TCGAATCAGGAAGGTTCACA+TGG - chr5_4:63836633-63836652 Msa0863800:intron 45.0%
! TGAGTATGGTGGAACTGTTG+GGG - chr5_4:63836669-63836688 Msa0863800:intron 45.0%
!! TGCCCTAGCTTTCCTGATTT+TGG - chr5_4:63837142-63837161 Msa0863800:intron 45.0%
TACTAAATGCAGCAAGCACG+TGG + chr5_4:63837233-63837252 None:intergenic 45.0%
ATACAGAACTATTGCTGGGG+AGG + chr5_4:63837581-63837600 None:intergenic 45.0%
AGCTCGCATTACTATGTAGC+CGG + chr5_4:63837771-63837790 None:intergenic 45.0%
CTACATAGTAATGCGAGCTG+AGG - chr5_4:63837772-63837791 Msa0863800:intron 45.0%
CTTGAACATCAAGATGCCAG+AGG - chr5_4:63837844-63837863 Msa0863800:intron 45.0%
AGATGCAAAGATGCTAGGGT+AGG + chr5_4:63838080-63838099 None:intergenic 45.0%
GGCCCGCAAATCTTAAACAT+TGG + chr5_4:63838135-63838154 None:intergenic 45.0%
TCAGGGTCACCAATATGAGA+CGG - chr5_4:63838182-63838201 Msa0863800:CDS 45.0%
CACCAATATGAGACGGTATC+AGG - chr5_4:63838189-63838208 Msa0863800:CDS 45.0%
AGCCTGATACCGTCTCATAT+TGG + chr5_4:63838194-63838213 None:intergenic 45.0%
! GGCTTTGTATGTGAAGCCTT+TGG - chr5_4:63838210-63838229 Msa0863800:CDS 45.0%
! TTGATGGTTTCTCCTGTCCT+TGG + chr5_4:63838243-63838262 None:intergenic 45.0%
GATGACAACGATGACACCAA+TGG - chr5_4:63838288-63838307 Msa0863800:CDS 45.0%
GTTTCTTCTCTTTCGGTTCC+TGG + chr5_4:63838320-63838339 None:intergenic 45.0%
TCTTTGACGCAGATACTAGC+AGG - chr5_4:63838485-63838504 Msa0863800:CDS 45.0%
ACTAGCAGGAAATGCGAGAA+AGG - chr5_4:63838499-63838518 Msa0863800:CDS 45.0%
TGGTGAGGAATCTGAAGATG+AGG - chr5_4:63838625-63838644 Msa0863800:CDS 45.0%
GAAGATGAGGCAGAGTATGA+TGG - chr5_4:63838638-63838657 Msa0863800:CDS 45.0%
!! TATATATTATTAAATTAAAG+TGG + chr5_4:63837032-63837051 None:intergenic 5.0%
CATCTGACAACCAGAGCAAG+TGG - chr5_4:63830721-63830740 Msa0863800:three_prime_UTR 50.0%
TCTGACAACCAGAGCAAGTG+GGG - chr5_4:63830723-63830742 Msa0863800:three_prime_UTR 50.0%
GAATGGGAATTGAGAAGGCG+TGG + chr5_4:63830774-63830793 None:intergenic 50.0%
! TTTTCACCTTCCTCGGTCCT+CGG - chr5_4:63830892-63830911 Msa0863800:three_prime_UTR 50.0%
ACACTCGAATCAGGGGTTCT+GGG - chr5_4:63831046-63831065 Msa0863800:CDS 50.0%
!! AGTTGGTGGAGCTAGCTTGA+AGG - chr5_4:63831252-63831271 Msa0863800:CDS 50.0%
TGCTACTGTTTGTGGGGTGT+TGG - chr5_4:63831390-63831409 Msa0863800:intron 50.0%
!! GTTTGTGGGGTGTTGGTGTT+TGG - chr5_4:63831397-63831416 Msa0863800:intron 50.0%
! ACTGAAGGTGTGGTGAATGC+TGG - chr5_4:63831439-63831458 Msa0863800:CDS 50.0%
GGTGTGGTGAATGCTGGATA+TGG - chr5_4:63831445-63831464 Msa0863800:CDS 50.0%
!! GGTTAAGAGTACTTGGCCGA+CGG - chr5_4:63831492-63831511 Msa0863800:CDS 50.0%
AAAAGGATTGTTGCCGGGGT+TGG - chr5_4:63831722-63831741 Msa0863800:intron 50.0%
AAAGGATTGTTGCCGGGGTT+GGG - chr5_4:63831723-63831742 Msa0863800:intron 50.0%
TCCAAAACTCAACCCAACCC+CGG + chr5_4:63831738-63831757 None:intergenic 50.0%
TTGGATCATGTCGCCACTGA+AGG - chr5_4:63832366-63832385 Msa0863800:intron 50.0%
! GGTTCGTGAGTTGGCTGAAA+AGG - chr5_4:63832716-63832735 Msa0863800:intron 50.0%
GAAGCTGCAACTGCAGCATT+CGG - chr5_4:63832938-63832957 Msa0863800:intron 50.0%
GGTTCATAATGCCACAGAGG+TGG - chr5_4:63833847-63833866 Msa0863800:intron 50.0%
ATAATGCCACAGAGGTGGCT+CGG - chr5_4:63833852-63833871 Msa0863800:intron 50.0%
TCTCTGGTACTGTATCCTGC+AGG - chr5_4:63834052-63834071 Msa0863800:CDS 50.0%
GAGTTATCATGGTGCATGGG+TGG + chr5_4:63834283-63834302 None:intergenic 50.0%
TGGAATGTAAGCTCTTCGGG+AGG - chr5_4:63834824-63834843 Msa0863800:intron 50.0%
AGCATATGCGATGGATCTGC+TGG - chr5_4:63836316-63836335 Msa0863800:intron 50.0%
AAATGCAGCAAGCACGTGGA+AGG + chr5_4:63837229-63837248 None:intergenic 50.0%
TTGCTGGGGAGGAAAAGTGA+CGG + chr5_4:63837570-63837589 None:intergenic 50.0%
!! GTAGGCTGCAATGGTTCTGA+GGG + chr5_4:63838062-63838081 None:intergenic 50.0%
TTGCGGGCCTATTAATACGG+TGG - chr5_4:63838146-63838165 Msa0863800:CDS 50.0%
TCTTCTCTTTCGGTTCCTGG+TGG + chr5_4:63838317-63838336 None:intergenic 50.0%
! CGAGAAAGGTGAGTGCTGTT+CGG - chr5_4:63838513-63838532 Msa0863800:CDS 50.0%
!! TGGAGGAGAGTTGGTGGACT+TGG + chr5_4:63830754-63830773 None:intergenic 55.0%
! TGGGAATTGAGAAGGCGTGG+AGG + chr5_4:63830771-63830790 None:intergenic 55.0%
GACACTCGAATCAGGGGTTC+TGG - chr5_4:63831045-63831064 Msa0863800:CDS 55.0%
!!! GGGGTTGGGTTGAGTTTTGG+AGG - chr5_4:63831737-63831756 Msa0863800:intron 55.0%
CGCAGCAACAGGAGTGATGA+CGG - chr5_4:63832976-63832995 Msa0863800:intron 55.0%
CGCGGTTCATAATGCCACAG+AGG - chr5_4:63833844-63833863 Msa0863800:intron 55.0%
ACCAGAGAAAGCCATGCCAC+TGG + chr5_4:63834040-63834059 None:intergenic 55.0%
! TTCGGGAGGCACACAGTTAG+AGG - chr5_4:63834838-63834857 Msa0863800:intron 55.0%
! GGTAGGCTGCAATGGTTCTG+AGG + chr5_4:63838063-63838082 None:intergenic 55.0%
GATGCTAGGGTAGGCTGCAA+TGG + chr5_4:63838071-63838090 None:intergenic 55.0%
TGACACCAATGGTGACCACC+AGG - chr5_4:63838299-63838318 Msa0863800:CDS 55.0%
TGGACTGACCCCACTTGCTC+TGG + chr5_4:63830734-63830753 None:intergenic 60.0%
AAGGCGTGGAGGAGAGTTGG+TGG + chr5_4:63830760-63830779 None:intergenic 60.0%
! GAGAAGGCGTGGAGGAGAGT+TGG + chr5_4:63830763-63830782 None:intergenic 60.0%
ATGCAACCGAGGACCGAGGA+AGG + chr5_4:63830901-63830920 None:intergenic 60.0%
TGAGATGCAACCGAGGACCG+AGG + chr5_4:63830905-63830924 None:intergenic 60.0%
!!! GCCGGGGTTGGGTTGAGTTT+TGG - chr5_4:63831734-63831753 Msa0863800:intron 60.0%
ACTGCAGCATTCGGCGAAGC+TGG - chr5_4:63832947-63832966 Msa0863800:intron 60.0%
CACAAACCGAGCCACCTCTG+TGG + chr5_4:63833861-63833880 None:intergenic 60.0%
!! CACAGAGGTGGCTCGGTTTG+TGG - chr5_4:63833859-63833878 Msa0863800:intron 60.0%
ATGCCTCTAGGTCAGGCCAG+TGG - chr5_4:63834021-63834040 Msa0863800:intron 60.0%
! ATGCCACTGGCCTGACCTAG+AGG + chr5_4:63834027-63834046 None:intergenic 60.0%
TCTAGGTCAGGCCAGTGGCA+TGG - chr5_4:63834026-63834045 Msa0863800:intron 60.0%
GCCAGTGGCATGGCTTTCTC+TGG - chr5_4:63834036-63834055 Msa0863800:intron 60.0%
CGGTTCCTGGTGGTCACCAT+TGG + chr5_4:63838307-63838326 None:intergenic 60.0%
! GCTGGTGTCAGCGCAGCAAC+AGG - chr5_4:63832965-63832984 Msa0863800:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 63830714 63839061 63830714 ID=Msa0863800;Name=Msa0863800
chr5_4 mRNA 63830714 63839061 63830714 ID=Msa0863800-mRNA-1;Parent=Msa0863800;Name=Msa0863800-mRNA-1;_AED=0.06;_eAED=0.06;_QI=329|1|1|1|1|1|14|319|672
chr5_4 exon 63830714 63831278 63830714 ID=Msa0863800-mRNA-1:exon:20076;Parent=Msa0863800-mRNA-1
chr5_4 exon 63831419 63831589 63831419 ID=Msa0863800-mRNA-1:exon:20075;Parent=Msa0863800-mRNA-1
chr5_4 exon 63831910 63832026 63831910 ID=Msa0863800-mRNA-1:exon:20074;Parent=Msa0863800-mRNA-1
chr5_4 exon 63832268 63832333 63832268 ID=Msa0863800-mRNA-1:exon:20073;Parent=Msa0863800-mRNA-1
chr5_4 exon 63833085 63833176 63833085 ID=Msa0863800-mRNA-1:exon:20072;Parent=Msa0863800-mRNA-1
chr5_4 exon 63833265 63833328 63833265 ID=Msa0863800-mRNA-1:exon:20071;Parent=Msa0863800-mRNA-1
chr5_4 exon 63833423 63833501 63833423 ID=Msa0863800-mRNA-1:exon:20070;Parent=Msa0863800-mRNA-1
chr5_4 exon 63833580 63833719 63833580 ID=Msa0863800-mRNA-1:exon:20069;Parent=Msa0863800-mRNA-1
chr5_4 exon 63834039 63834120 63834039 ID=Msa0863800-mRNA-1:exon:20068;Parent=Msa0863800-mRNA-1
chr5_4 exon 63835641 63835744 63835641 ID=Msa0863800-mRNA-1:exon:20067;Parent=Msa0863800-mRNA-1
chr5_4 exon 63835895 63835972 63835895 ID=Msa0863800-mRNA-1:exon:20066;Parent=Msa0863800-mRNA-1
chr5_4 exon 63836778 63836871 63836778 ID=Msa0863800-mRNA-1:exon:20065;Parent=Msa0863800-mRNA-1
chr5_4 exon 63836961 63837058 63836961 ID=Msa0863800-mRNA-1:exon:20064;Parent=Msa0863800-mRNA-1
chr5_4 exon 63838145 63839061 63838145 ID=Msa0863800-mRNA-1:exon:20063;Parent=Msa0863800-mRNA-1
chr5_4 five_prime_UTR 63838733 63839061 63838733 ID=Msa0863800-mRNA-1:five_prime_utr;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63838145 63838732 63838145 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63836961 63837058 63836961 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63836778 63836871 63836778 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63835895 63835972 63835895 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63835641 63835744 63835641 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63834039 63834120 63834039 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63833580 63833719 63833580 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63833423 63833501 63833423 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63833265 63833328 63833265 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63833085 63833176 63833085 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63832268 63832333 63832268 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63831910 63832026 63831910 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63831419 63831589 63831419 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 CDS 63831033 63831278 63831033 ID=Msa0863800-mRNA-1:cds;Parent=Msa0863800-mRNA-1
chr5_4 three_prime_UTR 63830714 63831032 63830714 ID=Msa0863800-mRNA-1:three_prime_utr;Parent=Msa0863800-mRNA-1
Gene Sequence

>Msa0863800

ATGACACTCGAATCAGGGGTTCTGGGTCATCGAGTTTTCATTTCGGGTTCGAAATTGTTTTACCCTGTGCATGAGAATCGTACAAAGAGAATGCCAATGAAGGTTTTGGGTACAAATGGGAGATACCCTTTTCCTATTGTGTCCAACTGTGTTGGCCCTTTCAATTGTAAAAGCTTTCATCTTTCAAGTTATGGAAAAAATTTGAATTTAGTTGGTGGAGCTAGCTTGAAGGTGAAGTGTATTGGTAGTGGTAGTGATAGTGATTGTTTGCGAGCGAAAAACAATGTTTCCGATGCTAATTTGAAGTTTACAAATGAAGTTTTGGTGAAGAGAGGAATTATTTTGGCTGCTACTGTTTGTGGGGTGTTGGTGTTTGGATGCCCTAAAGTTTTGGCTACTGAAGGTGTGGTGAATGCTGGATATGGTGTTATTGGAAAGTGTATACTTTTGGTTAAGAGTACTTGGCCGACGGTGTTGCAAATTCTTCGTTTGTTTAAGGAACAAGGATTGTTATTGGCTTTGCTTTTGGGTCTTTCGGCTTTTTTCTCTCTGGCAGAGACTTCGATTACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAGTCTGAAAATGGCGTCTTCAGACTACTCCGAAGTGATGTTACTCGGTTCCTCACAACCATACTTATTGGCACAACTGTGGTAAATATTGCAGCAACTGCTCTGGTCACAGAAGCTGCAACTGCAGCATTCGGCGAAGCTGGTGTCAGCGCAGCAACAGGAGTGATGACGGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATCGCGGTTCATAATGCCACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCTCTGGTACTGTATCCTGCAGGAAGAATTGTTACCTTTCTTTCAATGGGGATGCTTAAATTGCTTGGCTTAAAAGGAAGTAGTGAGCCATATGTAACTGAAGAGGAGCTAAAACTGATGCTAAGGGGTGCAGAATTAAGTGGAGCAATAGAAGAGGAAGAACAGGATATGATCGAAAATGTGTTGGAGATAAAAGACACACATGTCAGAGAAGTTATGACGCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTTGTAGATTTTCATCACTTGTGGGTTACACATCAATACTCAAGGGTTCCTGTTTTTGAGCAACGTGTTGATAATATAATGGGTATAGCATATGCGATGGATCTGCTGGATTATGTCCAAAAGGGCGAAACTCTAGAAAGTATCACAGTTGGAGATTTGGCTCACAAGCCTGCATATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAATTTCGAATCAGGAAGGTTCACATGGCTGTCGTTCTTAATGAGTATGGTGGAACTGTTGGGCTTGTAACTCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATATTCGATGAAAATGACTCGAAGGAGGAAATACAAAAGAAAACCGGCTACATAGTAATGCGAGCTGAGGGCGTTTTTGATGTCGATGCTAACACATCCATTGATCAACTCTCAGAAGACTTGAACATCAAGATGCCAGAGGGTCACCAATATGAGACGGTATCAGGCTTTGTATGTGAAGCCTTTGGTTACATTCCAAGGACAGGAGAAACCATCAAGTTAGTTCTTGAAAGGGATGATGAAGATGACAACGATGACACCAATGGTGACCACCAGGAACCGAAAGAGAAGAAACATATTTTCAAACTTGAGATACTAGCAGGAAATGCGAGAAAGGTGAGTGCTGTTCGGTTTGAAAGATTACATAGTGGTGACGAAATGTTGGAAGCGAAAGAAGTAACACGAATGTTCCCAAAAATTGTGAAAAGAAAATGGAACAGTGGTGAGGAATCTGAAGATGAGGCAGAGTATGATGGATATACATTTCCAAAGAGACCACATGAAGACATTTCTAATGAATATGTAGTTGATCAGGAAAATTCTCATAGTAATTATTAA

Protein sequence

>Msa0863800

MTLESGVLGHRVFISGSKLFYPVHENRTKRMPMKVLGTNGRYPFPIVSNCVGPFNCKSFHLSSYGKNLNLVGGASLKVKCIGSGSDSDCLRAKNNVSDANLKFTNEVLVKRGIILAATVCGVLVFGCPKVLATEGVVNAGYGVIGKCILLVKSTWPTVLQILRLFKEQGLLLALLLGLSAFFSLAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIAATALVTEAATAAFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPAGRIVTFLSMGMLKLLGLKGSSEPYVTEEELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGETLESITVGDLAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGLVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGVFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGETIKLVLERDDEDDNDDTNGDHQEPKEKKHIFKLEILAGNARKVSAVRFERLHSGDEMLEAKEVTRMFPKIVKRKWNSGEESEDEAEYDGYTFPKRPHEDISNEYVVDQENSHSNY*