AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1260490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260490 MtrunA17_Chr4g0061921 99.708 342 1 0 1 342 1 342 0.0 710
Msa1260490 MtrunA17_Chr3g0087171 28.065 310 182 9 18 326 17 286 1.09e-27 114
Msa1260490 MtrunA17_Chr8g0351491 24.281 313 169 12 26 332 14 264 6.32e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260490 AT5G08160.1 83.573 347 52 2 1 342 1 347 0.0 609
Msa1260490 AT5G08160.2 78.426 343 41 2 1 342 1 311 0.0 551
Msa1260490 AT2G32850.2 29.393 313 179 11 27 337 26 298 1.62e-28 116
Msa1260490 AT2G32850.1 29.393 313 179 11 27 337 26 298 1.72e-28 116
Msa1260490 AT4G04710.4 27.037 270 140 13 33 295 41 260 5.71e-13 70.1
Msa1260490 AT4G04710.1 27.037 270 140 13 33 295 41 260 6.30e-13 70.1
Msa1260490 AT1G12680.1 25.581 301 165 12 32 332 111 352 1.69e-11 65.5
Msa1260490 AT2G45490.1 24.127 315 163 12 28 332 22 270 2.03e-11 64.3
Msa1260490 AT4G04710.2 26.400 250 128 12 33 275 41 241 3.31e-11 64.7

Find 121 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGGCTTTCATTGTTT+TGG 0.155584 8_2:+62536910 None:intergenic
CTGGCCATACTGATGGATTT+TGG 0.264286 8_2:-62536378 Msa1260490:CDS
GGTGGAATAGTGTTCCTTCT+TGG 0.288284 8_2:+62536895 None:intergenic
ATATGTTTGGCACTGAAATT+AGG 0.295793 8_2:+62538538 None:intergenic
CTTGTTATTTCCAGTTCATT+TGG 0.299548 8_2:-62536954 Msa1260490:CDS
CAGATGTTCTTCAAATATTT+CGG 0.304963 8_2:-62536871 Msa1260490:CDS
GTCTCTTGTAATTTATGAAA+TGG 0.323931 8_2:-62534357 Msa1260490:three_prime_UTR
GAGCTAATCTTCTTCCTTGC+GGG 0.327554 8_2:+62536345 None:intergenic
TCAAGAAGTGGGAGGAGATT+GGG 0.348271 8_2:+62537138 None:intergenic
CGGTACGAGAGCTCCTTTCT+TGG 0.351708 8_2:+62538664 None:intergenic
CATTTACAATAGCCAGTTGC+AGG 0.356717 8_2:+62534753 None:intergenic
CAACTGGAGTGCCTCTGATC+TGG 0.364109 8_2:+62536323 None:intergenic
ATCAGAGGCACTCCAGTTGC+AGG 0.377493 8_2:-62536319 Msa1260490:intron
TGGATCTTATGCTATGAAAA+AGG 0.382382 8_2:-62537232 Msa1260490:CDS
CTTGGGCAATCCCACAGCTC+AGG 0.394165 8_2:+62535818 None:intergenic
TGCTTACGTTTATCTCGTTA+AGG 0.398078 8_2:-62538347 Msa1260490:CDS
GGATAATGATATCGTCTATC+CGG 0.398152 8_2:+62534633 None:intergenic
GAAATAACAAGTACGCTTCA+TGG 0.400033 8_2:+62536966 None:intergenic
ACGAACTGATGAAGAGCTTC+TGG 0.403819 8_2:+62534692 None:intergenic
ACGAGCAGCTGGAGTTGGTC+AGG 0.404228 8_2:-62537194 Msa1260490:CDS
TCCGGGGCCTCATAGCAGCT+TGG 0.408265 8_2:+62534651 None:intergenic
TCAACCGACGACGTGAAATC+AGG 0.416104 8_2:-62538585 Msa1260490:five_prime_UTR
CACCTTCTCCGAGCTGCCTC+AGG 0.422367 8_2:+62538374 None:intergenic
ATCAAGAAGTGGGAGGAGAT+TGG 0.424760 8_2:+62537137 None:intergenic
TGAACGGAGGTGGTGATGTT+TGG 0.427535 8_2:-62538420 Msa1260490:CDS
TTGACATCATTGTGAGCATA+AGG 0.430332 8_2:+62536444 None:intergenic
ATCATATAATGCATTTAAAC+CGG 0.431617 8_2:+62538447 None:intergenic
TCATGCAATCATATCTGTTA+AGG 0.433133 8_2:-62537115 Msa1260490:intron
CCACCGGTAGCAGAGTCATT+AGG 0.436423 8_2:+62538319 None:intergenic
CTCCGAGCTGCCTCAGGATG+CGG 0.439204 8_2:+62538380 None:intergenic
TTGGTGTTAGTCTAGATAGT+AGG 0.440649 8_2:-62534423 Msa1260490:three_prime_UTR
CGTCTATATCAGCATGGCTT+GGG 0.443772 8_2:+62535801 None:intergenic
AATCCCACAGCTCAGGGGCT+CGG 0.444654 8_2:+62535825 None:intergenic
AAGAATGAATCACCTGCAAC+TGG 0.444808 8_2:+62536307 None:intergenic
GTCTGGTGGAAGCCTGCAAC+TGG 0.446847 8_2:-62534765 Msa1260490:CDS
AGTAGACACACACATGTGTT+TGG 0.447137 8_2:-62538703 Msa1260490:five_prime_UTR
TGAGGAAGACACAGGGAGAT+TGG 0.447172 8_2:+62534334 None:intergenic
TTGTAAATGCTCAGGTCAAA+TGG 0.451429 8_2:-62534739 Msa1260490:CDS
TTGGGCAATCCCACAGCTCA+GGG 0.451475 8_2:+62535819 None:intergenic
TTATTTCCAGTTCATTTGGA+TGG 0.458073 8_2:-62536950 Msa1260490:CDS
CAGAAAAGGACAACCACCAC+TGG 0.459960 8_2:-62536397 Msa1260490:CDS
GAATATGCACTTGGAGAGTC+TGG 0.460612 8_2:-62534782 Msa1260490:CDS
AGGACTGACGTTTGGTCACT+AGG 0.464707 8_2:-62535776 Msa1260490:CDS
CTTTCCGAGCCCCTGAGCTG+TGG 0.468523 8_2:-62535829 Msa1260490:CDS
AATGTTCCATCCAAATGAAC+TGG 0.469154 8_2:+62536944 None:intergenic
CATTCAGAACAACGAGCAGC+TGG 0.475734 8_2:-62537205 Msa1260490:CDS
ACTGCCAAAATCCATCAGTA+TGG 0.479140 8_2:+62536374 None:intergenic
CAAGAAGTGGGAGGAGATTG+GGG 0.480551 8_2:+62537139 None:intergenic
TGGTGTTAGTCTAGATAGTA+GGG 0.480943 8_2:-62534422 Msa1260490:three_prime_UTR
CCCAAGCTGCTATGAGGCCC+CGG 0.483526 8_2:-62534652 Msa1260490:CDS
GCTCAGGTCAAATGGCCAGC+TGG 0.486173 8_2:-62534731 Msa1260490:CDS
TCGTCTATATCAGCATGGCT+TGG 0.489078 8_2:+62535800 None:intergenic
AAAATGGGTTGCTCATTCTC+CGG 0.492235 8_2:-62538466 Msa1260490:CDS
TTTCCGAGCCCCTGAGCTGT+GGG 0.494385 8_2:-62535828 Msa1260490:CDS
TGAAGAGCTTCTGGATATGA+AGG 0.497130 8_2:+62534701 None:intergenic
GAACAACGAGCAGCTGGAGT+TGG 0.499688 8_2:-62537199 Msa1260490:CDS
AGTCTAGATAGTAGGGCGTT+GGG 0.502257 8_2:-62534415 Msa1260490:three_prime_UTR
TAGTCTAGATAGTAGGGCGT+TGG 0.503563 8_2:-62534416 Msa1260490:three_prime_UTR
TAGACGAGAGGACTGACGTT+TGG 0.506638 8_2:-62535784 Msa1260490:CDS
TTCAGCCCCAAGCTGCTATG+AGG 0.508302 8_2:-62534658 Msa1260490:CDS
TGTTCTTCAAATATTTCGGC+AGG 0.511807 8_2:-62536867 Msa1260490:intron
GCAAACAGAGTGAGAAATAG+AGG 0.515649 8_2:-62538501 Msa1260490:five_prime_UTR
GTTCTCATAACACACAGAAA+AGG 0.516035 8_2:-62536411 Msa1260490:CDS
ACCACCACTGGCCATACTGA+TGG 0.518489 8_2:-62536385 Msa1260490:CDS
ACTGGCTATTGTAAATGCTC+AGG 0.518915 8_2:-62534747 Msa1260490:CDS
CTCTTCATCAGTTCGTGTCA+TGG 0.519184 8_2:-62534685 Msa1260490:CDS
GATAATGATATCGTCTATCC+GGG 0.519411 8_2:+62534634 None:intergenic
AGCCTACTCAAGAAACATCT+TGG 0.522960 8_2:-62536991 Msa1260490:CDS
ATCCTGAGGCAGCTCGGAGA+AGG 0.524053 8_2:-62538376 Msa1260490:CDS
CTCAATGAGTTATCATCGTA+GGG 0.525641 8_2:-62534583 Msa1260490:exon
ACAGATACGTTTAACTCTGT+GGG 0.526892 8_2:+62534469 None:intergenic
AAAATCGAGCGATCCAAGAA+AGG 0.529945 8_2:-62538677 Msa1260490:five_prime_UTR
TTCCGCATCCTGAGGCAGCT+CGG 0.538095 8_2:-62538382 Msa1260490:CDS
GGAGCTAATCTTCTTCCTTG+CGG 0.539998 8_2:+62536344 None:intergenic
CAAAACAATGAAAGCCAAGA+AGG 0.541448 8_2:-62536909 Msa1260490:CDS
TCTCAATGAGTTATCATCGT+AGG 0.547768 8_2:-62534584 Msa1260490:exon
TCTCCAAGTGCATATTCAAA+CGG 0.554376 8_2:+62534788 None:intergenic
TATGAAGGTTTAAGTCCAGC+TGG 0.554831 8_2:+62534716 None:intergenic
GCATTATATGATTCTGTGAA+CGG 0.557472 8_2:-62538436 Msa1260490:CDS
CTGAGGCAGCTCGGAGAAGG+TGG 0.559462 8_2:-62538373 Msa1260490:CDS
TCAACTCAACAGCTTTGTGC+AGG 0.560174 8_2:-62536495 Msa1260490:intron
AAATAACAAGTACGCTTCAT+GGG 0.562791 8_2:+62536967 None:intergenic
CGGGGCCTCATAGCAGCTTG+GGG 0.569578 8_2:+62534653 None:intergenic
AAAGACTCTTCTCATCTCGC+AGG 0.571736 8_2:-62538280 Msa1260490:intron
TCTCCGTTTGAATATGCACT+TGG 0.573973 8_2:-62534791 Msa1260490:CDS
CGAGCAGCTGGAGTTGGTCA+GGG 0.581004 8_2:-62537193 Msa1260490:CDS
TATGATTCTGTGAACGGAGG+TGG 0.581095 8_2:-62538430 Msa1260490:CDS
TGGGCAATCCCACAGCTCAG+GGG 0.583786 8_2:+62535820 None:intergenic
AAGACCTGATTTCACGTCGT+CGG 0.586470 8_2:+62538581 None:intergenic
GCTGCTCGTTGTTCTGAATG+AGG 0.586598 8_2:+62537208 None:intergenic
GTCCAAGATGTTTCTTGAGT+AGG 0.586917 8_2:+62536989 None:intergenic
GCTCCTAATGACTCTGCTAC+CGG 0.588613 8_2:-62538322 Msa1260490:CDS
GAGCTTATTAGCGAGACCAC+CGG 0.590187 8_2:+62538303 None:intergenic
ATGATTGCATGATCAAGAAG+TGG 0.592500 8_2:+62537126 None:intergenic
TGTGTTATGAGAACATTACC+AGG 0.596220 8_2:+62536420 None:intergenic
TACAGATACGTTTAACTCTG+TGG 0.596779 8_2:+62534468 None:intergenic
GCTCACAATGATGTCAAACC+TGG 0.597206 8_2:-62536438 Msa1260490:CDS
TTGGCAGTGCTCGTCCCGCA+AGG 0.600540 8_2:-62536359 Msa1260490:CDS
TCCTCTCGTCTATATCAGCA+TGG 0.609546 8_2:+62535795 None:intergenic
TCCATCAGTATGGCCAGTGG+TGG 0.622023 8_2:+62536384 None:intergenic
TGATTGCATGATCAAGAAGT+GGG 0.623676 8_2:+62537127 None:intergenic
GAAGATTAGCTCCAGATCAG+AGG 0.625557 8_2:-62536334 Msa1260490:CDS
ATTTATGCGCATAAAATCTG+AGG 0.630471 8_2:+62534316 None:intergenic
ACATCATTGTGAGCATAAGG+AGG 0.631567 8_2:+62536447 None:intergenic
ATAAAATCTGAGGAAGACAC+AGG 0.635750 8_2:+62534326 None:intergenic
TTGCAATCAACTTATCAACA+TGG 0.641794 8_2:+62534612 None:intergenic
TCGTAGGGAACAGTGTGGCA+TGG 0.643236 8_2:-62534568 Msa1260490:three_prime_UTR
TATTTGAAGAACATCTGAGG+TGG 0.650365 8_2:+62536877 None:intergenic
GCCATGCTGATATAGACGAG+AGG 0.653519 8_2:-62535796 Msa1260490:CDS
AGAATCGATTCCGCATCCTG+AGG 0.654930 8_2:-62538390 Msa1260490:CDS
AAATATTTGAAGAACATCTG+AGG 0.664166 8_2:+62536874 None:intergenic
GCAGCTGGAGTTGGTCAGGG+AGG 0.666966 8_2:-62537190 Msa1260490:CDS
TATGCACTTGGAGAGTCTGG+TGG 0.682888 8_2:-62534779 Msa1260490:CDS
GACTAAACAGTGAAGAGACG+CGG 0.691998 8_2:+62537163 None:intergenic
TTGCATGATCAAGAAGTGGG+AGG 0.694089 8_2:+62537130 None:intergenic
TAAAATCTGAGGAAGACACA+GGG 0.695867 8_2:+62534327 None:intergenic
AAATCCATCAGTATGGCCAG+TGG 0.697664 8_2:+62536381 None:intergenic
CAGATACGTTTAACTCTGTG+GGG 0.716370 8_2:+62534470 None:intergenic
ATAATGATATCGTCTATCCG+GGG 0.742304 8_2:+62534635 None:intergenic
TTATATGATTCTGTGAACGG+AGG 0.782200 8_2:-62538433 Msa1260490:CDS
TATCATCGTAGGGAACAGTG+TGG 0.794948 8_2:-62534573 Msa1260490:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATTTTTATTTATTACGATA+CGG + chr8_2:62534361-62534380 None:intergenic 15.0%
!!! TTTTGTATATGAAATATGTT+TGG + chr8_2:62534480-62534499 None:intergenic 15.0%
!!! TGTTTTTAAATGAATATAGA+TGG - chr8_2:62535136-62535155 Msa1260490:intron 15.0%
!!! TTATAATATCTTTTTTCATC+AGG - chr8_2:62536191-62536210 Msa1260490:intron 15.0%
!!! TATAATATCTTTTTTCATCA+GGG - chr8_2:62536192-62536211 Msa1260490:intron 15.0%
!! ATTTACAAACACTAAAAAAA+AGG + chr8_2:62536721-62536740 None:intergenic 15.0%
!!! CAAAGAAATTTAGTTTTAAA+TGG + chr8_2:62536978-62536997 None:intergenic 15.0%
!! AAATATATGAAAAACAATAC+TGG + chr8_2:62537488-62537507 None:intergenic 15.0%
!!! AGTATTGTTTTTCATATATT+TGG - chr8_2:62537487-62537506 Msa1260490:intron 15.0%
!!! TATGCATATATTATTGTTTT+GGG - chr8_2:62537864-62537883 Msa1260490:intron 15.0%
!!! TTTTTTTTTCTTTTCGTTTT+TGG - chr8_2:62538560-62538579 Msa1260490:five_prime_UTR 15.0%
!! ATCATATAATGCATTTAAAC+CGG + chr8_2:62534558-62534577 None:intergenic 20.0%
!! CACATCTTAACAATTAAAAA+TGG + chr8_2:62534764-62534783 None:intergenic 20.0%
!!! AGCTTAATTTTGATAATAAG+TGG - chr8_2:62535048-62535067 Msa1260490:intron 20.0%
!!! TGATTTATGTTTGAATGTTT+TGG - chr8_2:62535292-62535311 Msa1260490:intron 20.0%
!!! ATAATATCTTTTTTCATCAG+GGG - chr8_2:62536193-62536212 Msa1260490:intron 20.0%
!! AATCATTTGTACAAAAAGAA+TGG - chr8_2:62536367-62536386 Msa1260490:CDS 20.0%
!!! CTTATAACTATATCACATTT+TGG - chr8_2:62536822-62536841 Msa1260490:intron 20.0%
!! ACAATTTCACATAATACAAA+TGG + chr8_2:62536870-62536889 None:intergenic 20.0%
!! ATTTCTTAATTTACATTACC+TGG - chr8_2:62536943-62536962 Msa1260490:CDS 20.0%
!!! TTTTAAAATCTACAAGAAAC+TGG + chr8_2:62537045-62537064 None:intergenic 20.0%
!! TATAAAATAAGAGAAAGGAA+GGG - chr8_2:62537628-62537647 Msa1260490:intron 20.0%
!!! CTATGCATATATTATTGTTT+TGG - chr8_2:62537863-62537882 Msa1260490:intron 20.0%
!!! ATGCATATATTATTGTTTTG+GGG - chr8_2:62537865-62537884 Msa1260490:intron 20.0%
!! TGATTCTTTATTAATTCATG+TGG - chr8_2:62538165-62538184 Msa1260490:intron 20.0%
! ACAATTAAAAATGGATCGAA+AGG + chr8_2:62534755-62534774 None:intergenic 25.0%
!! TAGCAATTTTGAATTGACAT+TGG - chr8_2:62535224-62535243 Msa1260490:intron 25.0%
!! TCGTTAAGTAGAATCAATTT+TGG + chr8_2:62535480-62535499 None:intergenic 25.0%
! AAATATTTGAAGAACATCTG+AGG + chr8_2:62536131-62536150 None:intergenic 25.0%
! CAGATGTTCTTCAAATATTT+CGG - chr8_2:62536131-62536150 Msa1260490:intron 25.0%
! TGACTATAATAAGGTCTAAA+CGG + chr8_2:62536272-62536291 None:intergenic 25.0%
! AACCAAGAATGACTATAATA+AGG + chr8_2:62536281-62536300 None:intergenic 25.0%
!! TTTTGTACAAATGATTCTCA+AGG + chr8_2:62536363-62536382 None:intergenic 25.0%
! CTAAAATCTCAAAAAGAAGA+TGG + chr8_2:62536424-62536443 None:intergenic 25.0%
!! TTGATTTTACGAGGTTAAAA+GGG + chr8_2:62536491-62536510 None:intergenic 25.0%
!! GAAAAAGAAAAGCTTCTTTT+CGG - chr8_2:62537069-62537088 Msa1260490:intron 25.0%
! ACATTATATGCAATAATGTG+AGG - chr8_2:62537253-62537272 Msa1260490:intron 25.0%
!!! TTAGCAATGGATTGAAATTT+AGG - chr8_2:62537419-62537438 Msa1260490:intron 25.0%
! TAGCCTATAAAATAAGAGAA+AGG - chr8_2:62537623-62537642 Msa1260490:intron 25.0%
!!! CTTCCTTTCTCTTATTTTAT+AGG + chr8_2:62537629-62537648 None:intergenic 25.0%
! CTATAAAATAAGAGAAAGGA+AGG - chr8_2:62537627-62537646 Msa1260490:intron 25.0%
! AAACTTCTATACAAAGCTAT+TGG + chr8_2:62537936-62537955 None:intergenic 25.0%
! AAATCAAGCAATAATTCCAA+GGG + chr8_2:62537990-62538009 None:intergenic 25.0%
! AAAAATTATCCCAACTCTAT+TGG + chr8_2:62538029-62538048 None:intergenic 25.0%
!! CTTTTAGATATATAACTGGA+CGG + chr8_2:62538496-62538515 None:intergenic 25.0%
!!! ACTGCTTTTAGATATATAAC+TGG + chr8_2:62538500-62538519 None:intergenic 25.0%
! GTCTCTTGTAATTTATGAAA+TGG - chr8_2:62538645-62538664 Msa1260490:five_prime_UTR 25.0%
!! GGTCTTTGAAAATCACTTTT+TGG - chr8_2:62534438-62534457 Msa1260490:three_prime_UTR 30.0%
! ATATGTTTGGCACTGAAATT+AGG + chr8_2:62534467-62534486 None:intergenic 30.0%
AGGATCTGAAGAAGAAAAAT+GGG - chr8_2:62534521-62534540 Msa1260490:three_prime_UTR 30.0%
GCATTATATGATTCTGTGAA+CGG - chr8_2:62534566-62534585 Msa1260490:three_prime_UTR 30.0%
TTCAACAAATGACATAGATC+AGG + chr8_2:62534793-62534812 None:intergenic 30.0%
!!! TATGTTTTGATTTTCCGATC+CGG - chr8_2:62534850-62534869 Msa1260490:intron 30.0%
AAATGAAAATTCAGCTTCAC+CGG + chr8_2:62534872-62534891 None:intergenic 30.0%
! AGTGATTTTGTGATTAGACT+CGG - chr8_2:62534943-62534962 Msa1260490:intron 30.0%
! TGATGATGCTAATTGATAAC+AGG - chr8_2:62534987-62535006 Msa1260490:intron 30.0%
TCTTAGTTACTACAGCAAAA+TGG + chr8_2:62535088-62535107 None:intergenic 30.0%
! AGTGATGAAAAGTAGCTTTT+GGG + chr8_2:62535357-62535376 None:intergenic 30.0%
! AAGTGATGAAAAGTAGCTTT+TGG + chr8_2:62535358-62535377 None:intergenic 30.0%
GTCAAAATTACTGACATGTT+TGG - chr8_2:62535426-62535445 Msa1260490:intron 30.0%
GATTCATTCATGTAAAAGTG+AGG + chr8_2:62535559-62535578 None:intergenic 30.0%
AAATGTAAAGTGACATGGTT+TGG + chr8_2:62535581-62535600 None:intergenic 30.0%
GAGTAAAATGTAAAGTGACA+TGG + chr8_2:62535586-62535605 None:intergenic 30.0%
! TGATCTTTTGTGTGTATGTT+TGG + chr8_2:62535673-62535692 None:intergenic 30.0%
ACACAAAAGATCAATTCTGA+TGG - chr8_2:62535680-62535699 Msa1260490:intron 30.0%
TGGATCTTATGCTATGAAAA+AGG - chr8_2:62535770-62535789 Msa1260490:CDS 30.0%
TCATGCAATCATATCTGTTA+AGG - chr8_2:62535887-62535906 Msa1260490:intron 30.0%
AAATAACAAGTACGCTTCAT+GGG + chr8_2:62536038-62536057 None:intergenic 30.0%
!! CTTGTTATTTCCAGTTCATT+TGG - chr8_2:62536048-62536067 Msa1260490:intron 30.0%
TTATTTCCAGTTCATTTGGA+TGG - chr8_2:62536052-62536071 Msa1260490:intron 30.0%
AAATATTTCGGCAGGTAAAA+AGG - chr8_2:62536143-62536162 Msa1260490:intron 30.0%
GACCTTATTATAGTCATTCT+TGG - chr8_2:62536276-62536295 Msa1260490:intron 30.0%
TAATTCATGACATGAGACTT+GGG - chr8_2:62536328-62536347 Msa1260490:CDS 30.0%
! ACAAAAAGAATGGATTTCTC+TGG - chr8_2:62536377-62536396 Msa1260490:CDS 30.0%
!! GTTGATTTTACGAGGTTAAA+AGG + chr8_2:62536492-62536511 None:intergenic 30.0%
TGAAATTGTATTGCCTAATG+TGG - chr8_2:62536881-62536900 Msa1260490:CDS 30.0%
TTTAAATGGAATGTAAGACC+AGG + chr8_2:62536964-62536983 None:intergenic 30.0%
! CTTTGCTTGTGATTTCTTTT+TGG - chr8_2:62536993-62537012 Msa1260490:intron 30.0%
AGGATCAATATGCACATTAA+GGG + chr8_2:62537394-62537413 None:intergenic 30.0%
TATGAAAAACAATACTGGCA+GGG + chr8_2:62537483-62537502 None:intergenic 30.0%
ATATGAAAAACAATACTGGC+AGG + chr8_2:62537484-62537503 None:intergenic 30.0%
! TCTCATCTACAAGAACATTT+TGG + chr8_2:62537669-62537688 None:intergenic 30.0%
ACAATTTGAATTAGTGACTC+TGG + chr8_2:62537746-62537765 None:intergenic 30.0%
CAAATCAAGCAATAATTCCA+AGG + chr8_2:62537991-62538010 None:intergenic 30.0%
CTTGGAATTATTGCTTGATT+TGG - chr8_2:62537989-62538008 Msa1260490:intron 30.0%
AACAGAAATCCAATAGAGTT+GGG - chr8_2:62538017-62538036 Msa1260490:intron 30.0%
TTCAAGCAAGAGTTATTTGA+TGG + chr8_2:62538092-62538111 None:intergenic 30.0%
! ACAAGATATGTTTCTAACAC+CGG + chr8_2:62538124-62538143 None:intergenic 30.0%
! TTCATGTGGCTAAAATTTTC+AGG - chr8_2:62538179-62538198 Msa1260490:intron 30.0%
!!! TGGCTAAAATTTTCAGGTAT+GGG - chr8_2:62538185-62538204 Msa1260490:intron 30.0%
TTGCAATCAACTTATCAACA+TGG + chr8_2:62538393-62538412 None:intergenic 30.0%
ATTTATGCGCATAAAATCTG+AGG + chr8_2:62538689-62538708 None:intergenic 30.0%
! TCAGATTTTATGCGCATAAA+TGG - chr8_2:62538688-62538707 Msa1260490:five_prime_UTR 30.0%
! CAGATTTTATGCGCATAAAT+GGG - chr8_2:62538689-62538708 Msa1260490:five_prime_UTR 30.0%
GAGGATCTGAAGAAGAAAAA+TGG - chr8_2:62534520-62534539 Msa1260490:three_prime_UTR 35.0%
TTATATGATTCTGTGAACGG+AGG - chr8_2:62534569-62534588 Msa1260490:three_prime_UTR 35.0%
TGCTTACGTTTATCTCGTTA+AGG - chr8_2:62534655-62534674 Msa1260490:CDS 35.0%
!!! GCTCTTGTTATTGCGTTTTA+TGG - chr8_2:62534917-62534936 Msa1260490:intron 35.0%
! GTGATGAAAAGTAGCTTTTG+GGG + chr8_2:62535356-62535375 None:intergenic 35.0%
! ATGTTTGGTTTCACTTCCAA+AGG - chr8_2:62535402-62535421 Msa1260490:intron 35.0%
!!! GTCAGTAATTTTGACTCCTT+TGG + chr8_2:62535421-62535440 None:intergenic 35.0%
TGATTGCATGATCAAGAAGT+GGG + chr8_2:62535878-62535897 None:intergenic 35.0%
ATGATTGCATGATCAAGAAG+TGG + chr8_2:62535879-62535898 None:intergenic 35.0%
GAAATAACAAGTACGCTTCA+TGG + chr8_2:62536039-62536058 None:intergenic 35.0%
AATGTTCCATCCAAATGAAC+TGG + chr8_2:62536061-62536080 None:intergenic 35.0%
!! CTTCTTGGCTTTCATTGTTT+TGG + chr8_2:62536095-62536114 None:intergenic 35.0%
CAAAACAATGAAAGCCAAGA+AGG - chr8_2:62536093-62536112 Msa1260490:intron 35.0%
TATTTGAAGAACATCTGAGG+TGG + chr8_2:62536128-62536147 None:intergenic 35.0%
TGTTCTTCAAATATTTCGGC+AGG - chr8_2:62536135-62536154 Msa1260490:intron 35.0%
!!! ATATCTTTTTTCATCAGGGG+AGG - chr8_2:62536196-62536215 Msa1260490:intron 35.0%
!!! TATCTTTTTTCATCAGGGGA+GGG - chr8_2:62536197-62536216 Msa1260490:intron 35.0%
AATTGCAAAAGTGATGCTTG+AGG + chr8_2:62536233-62536252 None:intergenic 35.0%
GTAATTCATGACATGAGACT+TGG - chr8_2:62536327-62536346 Msa1260490:CDS 35.0%
TTGACATCATTGTGAGCATA+AGG + chr8_2:62536561-62536580 None:intergenic 35.0%
TGTGTTATGAGAACATTACC+AGG + chr8_2:62536585-62536604 None:intergenic 35.0%
GTTCTCATAACACACAGAAA+AGG - chr8_2:62536591-62536610 Msa1260490:intron 35.0%
ATTGTATTGCCTAATGTGGT+AGG - chr8_2:62536885-62536904 Msa1260490:CDS 35.0%
! TTGTCTTGCTATGTAGGAAT+GGG - chr8_2:62537129-62537148 Msa1260490:CDS 35.0%
CAGGATCAATATGCACATTA+AGG + chr8_2:62537395-62537414 None:intergenic 35.0%
ATGAAAAACAATACTGGCAG+GGG + chr8_2:62537482-62537501 None:intergenic 35.0%
!! CTACAAGAACATTTTGGTCA+GGG + chr8_2:62537663-62537682 None:intergenic 35.0%
!! TCTACAAGAACATTTTGGTC+AGG + chr8_2:62537664-62537683 None:intergenic 35.0%
TTGTAGATGAGATGTCAAGA+GGG - chr8_2:62537677-62537696 Msa1260490:intron 35.0%
! GCTATTGGATTTTATTCACG+TGG + chr8_2:62537921-62537940 None:intergenic 35.0%
CAACAGAAATCCAATAGAGT+TGG - chr8_2:62538016-62538035 Msa1260490:intron 35.0%
CTTGCTTGAAAACAACTATC+CGG - chr8_2:62538102-62538121 Msa1260490:intron 35.0%
!!! GTGGCTAAAATTTTCAGGTA+TGG - chr8_2:62538184-62538203 Msa1260490:intron 35.0%
!!! GGCTAAAATTTTCAGGTATG+GGG - chr8_2:62538186-62538205 Msa1260490:intron 35.0%
TCTCCAAGTGCATATTCAAA+CGG + chr8_2:62538217-62538236 None:intergenic 35.0%
TTGTAAATGCTCAGGTCAAA+TGG - chr8_2:62538263-62538282 Msa1260490:intron 35.0%
ATAATGATATCGTCTATCCG+GGG + chr8_2:62538370-62538389 None:intergenic 35.0%
GATAATGATATCGTCTATCC+GGG + chr8_2:62538371-62538390 None:intergenic 35.0%
GGATAATGATATCGTCTATC+CGG + chr8_2:62538372-62538391 None:intergenic 35.0%
TCTCAATGAGTTATCATCGT+AGG - chr8_2:62538418-62538437 Msa1260490:CDS 35.0%
CTCAATGAGTTATCATCGTA+GGG - chr8_2:62538419-62538438 Msa1260490:CDS 35.0%
ACAGATACGTTTAACTCTGT+GGG + chr8_2:62538536-62538555 None:intergenic 35.0%
TACAGATACGTTTAACTCTG+TGG + chr8_2:62538537-62538556 None:intergenic 35.0%
!! TTGGTGTTAGTCTAGATAGT+AGG - chr8_2:62538579-62538598 Msa1260490:five_prime_UTR 35.0%
! TGGTGTTAGTCTAGATAGTA+GGG - chr8_2:62538580-62538599 Msa1260490:five_prime_UTR 35.0%
TAAAATCTGAGGAAGACACA+GGG + chr8_2:62538678-62538697 None:intergenic 35.0%
ATAAAATCTGAGGAAGACAC+AGG + chr8_2:62538679-62538698 None:intergenic 35.0%
AGTAGACACACACATGTGTT+TGG - chr8_2:62534299-62534318 Msa1260490:three_prime_UTR 40.0%
AAAATCGAGCGATCCAAGAA+AGG - chr8_2:62534325-62534344 Msa1260490:three_prime_UTR 40.0%
GCAAACAGAGTGAGAAATAG+AGG - chr8_2:62534501-62534520 Msa1260490:three_prime_UTR 40.0%
!! AAAATGGGTTGCTCATTCTC+CGG - chr8_2:62534536-62534555 Msa1260490:three_prime_UTR 40.0%
AAAATTCAGCTTCACCGGAT+CGG + chr8_2:62534867-62534886 None:intergenic 40.0%
CATCACTTCTAGTCAAACCA+AGG - chr8_2:62535370-62535389 Msa1260490:intron 40.0%
CCAAACATCTTTCGAAACCT+TGG + chr8_2:62535390-62535409 None:intergenic 40.0%
CCAAGGTTTCGAAAGATGTT+TGG - chr8_2:62535387-62535406 Msa1260490:intron 40.0%
!! TGTGTGTATGTTTGGTTCTG+CGG + chr8_2:62535665-62535684 None:intergenic 40.0%
! GTGTGTGTTTGATTTCACAG+TGG + chr8_2:62535709-62535728 None:intergenic 40.0%
TGTCTCTTATCTGCAGATGA+TGG - chr8_2:62535750-62535769 Msa1260490:intron 40.0%
! GTAGAATGTGTCCCTTTTGT+TGG - chr8_2:62535987-62536006 Msa1260490:intron 40.0%
AGCCTACTCAAGAAACATCT+TGG - chr8_2:62536011-62536030 Msa1260490:intron 40.0%
GTCCAAGATGTTTCTTGAGT+AGG + chr8_2:62536016-62536035 None:intergenic 40.0%
!!! GCTGTTGAGTTGATTTTACG+AGG + chr8_2:62536500-62536519 None:intergenic 40.0%
ACATCATTGTGAGCATAAGG+AGG + chr8_2:62536558-62536577 None:intergenic 40.0%
ACTGCCAAAATCCATCAGTA+TGG + chr8_2:62536631-62536650 None:intergenic 40.0%
AAGAATGAATCACCTGCAAC+TGG + chr8_2:62536698-62536717 None:intergenic 40.0%
TGACACAGCACAAAAATGTG+TGG - chr8_2:62536797-62536816 Msa1260490:intron 40.0%
TAGGTGCATATGCATCATCA+AGG - chr8_2:62536904-62536923 Msa1260490:CDS 40.0%
! TTCTTTTCGGTCATCTAGCT+TGG - chr8_2:62537082-62537101 Msa1260490:intron 40.0%
TTCCTACATAGCAAGACAAG+TGG + chr8_2:62537128-62537147 None:intergenic 40.0%
! CTTGTCTTGCTATGTAGGAA+TGG - chr8_2:62537128-62537147 Msa1260490:CDS 40.0%
! GTGCCTTCATAACCACATTT+TGG - chr8_2:62537330-62537349 Msa1260490:intron 40.0%
GGACCAAAATGTGGTTATGA+AGG + chr8_2:62537336-62537355 None:intergenic 40.0%
AAGGGTTTAGATCAAGTGCA+TGG + chr8_2:62537376-62537395 None:intergenic 40.0%
TTGATCCTGCAAGTTAGCAA+TGG - chr8_2:62537406-62537425 Msa1260490:intron 40.0%
! TCAATCCATTGCTAACTTGC+AGG + chr8_2:62537414-62537433 None:intergenic 40.0%
CTTGTAGATGAGATGTCAAG+AGG - chr8_2:62537676-62537695 Msa1260490:intron 40.0%
TTTACTGATGCCCATGCTAT+TGG - chr8_2:62537836-62537855 Msa1260490:intron 40.0%
GCATAGTGATCCAATAGCAT+GGG + chr8_2:62537849-62537868 None:intergenic 40.0%
TGCATAGTGATCCAATAGCA+TGG + chr8_2:62537850-62537869 None:intergenic 40.0%
CCTCAAGAGTCAAGAAAACA+CGG + chr8_2:62537961-62537980 None:intergenic 40.0%
! CGTGTTTTCTTGACTCTTGA+GGG - chr8_2:62537959-62537978 Msa1260490:intron 40.0%
TCTCCGTTTGAATATGCACT+TGG - chr8_2:62538211-62538230 Msa1260490:intron 40.0%
CATTTACAATAGCCAGTTGC+AGG + chr8_2:62538252-62538271 None:intergenic 40.0%
ACTGGCTATTGTAAATGCTC+AGG - chr8_2:62538255-62538274 Msa1260490:intron 40.0%
TATGAAGGTTTAAGTCCAGC+TGG + chr8_2:62538289-62538308 None:intergenic 40.0%
TGAAGAGCTTCTGGATATGA+AGG + chr8_2:62538304-62538323 None:intergenic 40.0%
CAGATACGTTTAACTCTGTG+GGG + chr8_2:62538535-62538554 None:intergenic 40.0%
AAGACCTGATTTCACGTCGT+CGG + chr8_2:62534424-62534443 None:intergenic 45.0%
TATGATTCTGTGAACGGAGG+TGG - chr8_2:62534572-62534591 Msa1260490:three_prime_UTR 45.0%
AAAGACTCTTCTCATCTCGC+AGG - chr8_2:62534722-62534741 Msa1260490:CDS 45.0%
GACTAAACAGTGAAGAGACG+CGG + chr8_2:62535842-62535861 None:intergenic 45.0%
TCAAGAAGTGGGAGGAGATT+GGG + chr8_2:62535867-62535886 None:intergenic 45.0%
ATCAAGAAGTGGGAGGAGAT+TGG + chr8_2:62535868-62535887 None:intergenic 45.0%
TTGCATGATCAAGAAGTGGG+AGG + chr8_2:62535875-62535894 None:intergenic 45.0%
! AGCAGGAAAGGTGTAAGTGT+TGG + chr8_2:62535934-62535953 None:intergenic 45.0%
TACACCTTTCCTGCTTAGCT+CGG - chr8_2:62535939-62535958 Msa1260490:intron 45.0%
TGAGTAGGCTGCCAACAAAA+GGG + chr8_2:62536001-62536020 None:intergenic 45.0%
TTGAGTAGGCTGCCAACAAA+AGG + chr8_2:62536002-62536021 None:intergenic 45.0%
GGTGGAATAGTGTTCCTTCT+TGG + chr8_2:62536110-62536129 None:intergenic 45.0%
! TCAACTCAACAGCTTTGTGC+AGG - chr8_2:62536507-62536526 Msa1260490:intron 45.0%
GCTCACAATGATGTCAAACC+TGG - chr8_2:62536564-62536583 Msa1260490:intron 45.0%
AAATCCATCAGTATGGCCAG+TGG + chr8_2:62536624-62536643 None:intergenic 45.0%
!!! CTGGCCATACTGATGGATTT+TGG - chr8_2:62536624-62536643 Msa1260490:intron 45.0%
GAGCTAATCTTCTTCCTTGC+GGG + chr8_2:62536660-62536679 None:intergenic 45.0%
GGAGCTAATCTTCTTCCTTG+CGG + chr8_2:62536661-62536680 None:intergenic 45.0%
! GAAGATTAGCTCCAGATCAG+AGG - chr8_2:62536668-62536687 Msa1260490:intron 45.0%
AGAACTTCCACTTGCAGAAC+TGG - chr8_2:62536768-62536787 Msa1260490:intron 45.0%
ACAGAAACCAGTTCTGCAAG+TGG + chr8_2:62536778-62536797 None:intergenic 45.0%
GCATATGCACCTACCACATT+AGG + chr8_2:62536897-62536916 None:intergenic 45.0%
! CTAGCTTGGATTTTCTGACC+TGG - chr8_2:62537096-62537115 Msa1260490:intron 45.0%
! TGCCACTTGTCTTGCTATGT+AGG - chr8_2:62537123-62537142 Msa1260490:CDS 45.0%
CGTCTATATCAGCATGGCTT+GGG + chr8_2:62537204-62537223 None:intergenic 45.0%
TCGTCTATATCAGCATGGCT+TGG + chr8_2:62537205-62537224 None:intergenic 45.0%
TCCTCTCGTCTATATCAGCA+TGG + chr8_2:62537210-62537229 None:intergenic 45.0%
AGGAGTTGAGGACCAAAATG+TGG + chr8_2:62537345-62537364 None:intergenic 45.0%
ATGGCACATATGAGGAGTTG+AGG + chr8_2:62537357-62537376 None:intergenic 45.0%
TCAAGTGCATGGCACATATG+AGG + chr8_2:62537365-62537384 None:intergenic 45.0%
TGTTCACATGTCTGTGTGTG+AGG - chr8_2:62537517-62537536 Msa1260490:intron 45.0%
!! TCTGGCTCTTTAGTAGGACT+TGG + chr8_2:62537728-62537747 None:intergenic 45.0%
!! AGTGACTCTGGCTCTTTAGT+AGG + chr8_2:62537734-62537753 None:intergenic 45.0%
! CCGTGTTTTCTTGACTCTTG+AGG - chr8_2:62537958-62537977 Msa1260490:intron 45.0%
GAATATGCACTTGGAGAGTC+TGG - chr8_2:62538220-62538239 Msa1260490:intron 45.0%
ACGAACTGATGAAGAGCTTC+TGG + chr8_2:62538313-62538332 None:intergenic 45.0%
CTCTTCATCAGTTCGTGTCA+TGG - chr8_2:62538317-62538336 Msa1260490:CDS 45.0%
TATCATCGTAGGGAACAGTG+TGG - chr8_2:62538429-62538448 Msa1260490:CDS 45.0%
TAGTCTAGATAGTAGGGCGT+TGG - chr8_2:62538586-62538605 Msa1260490:five_prime_UTR 45.0%
! AGTCTAGATAGTAGGGCGTT+GGG - chr8_2:62538587-62538606 Msa1260490:five_prime_UTR 45.0%
TCAACCGACGACGTGAAATC+AGG - chr8_2:62534417-62534436 Msa1260490:three_prime_UTR 50.0%
! TGAACGGAGGTGGTGATGTT+TGG - chr8_2:62534582-62534601 Msa1260490:exon 50.0%
! AGAATCGATTCCGCATCCTG+AGG - chr8_2:62534612-62534631 Msa1260490:CDS 50.0%
GCTCCTAATGACTCTGCTAC+CGG - chr8_2:62534680-62534699 Msa1260490:CDS 50.0%
GAGCTTATTAGCGAGACCAC+CGG + chr8_2:62534702-62534721 None:intergenic 50.0%
! AGACTCGGTAAAGCTCGTGT+TGG - chr8_2:62534958-62534977 Msa1260490:intron 50.0%
! GCTGCTCGTTGTTCTGAATG+AGG + chr8_2:62535797-62535816 None:intergenic 50.0%
CATTCAGAACAACGAGCAGC+TGG - chr8_2:62535797-62535816 Msa1260490:CDS 50.0%
CAAGAAGTGGGAGGAGATTG+GGG + chr8_2:62535866-62535885 None:intergenic 50.0%
! AAAAGCATGCCGAGCTAAGC+AGG + chr8_2:62535951-62535970 None:intergenic 50.0%
CAGAAAAGGACAACCACCAC+TGG - chr8_2:62536605-62536624 Msa1260490:intron 50.0%
CAAGACAAGTGGCAAACACC+AGG + chr8_2:62537117-62537136 None:intergenic 50.0%
GCCATGCTGATATAGACGAG+AGG - chr8_2:62537206-62537225 Msa1260490:CDS 50.0%
TAGACGAGAGGACTGACGTT+TGG - chr8_2:62537218-62537237 Msa1260490:CDS 50.0%
AGGACTGACGTTTGGTCACT+AGG - chr8_2:62537226-62537245 Msa1260490:CDS 50.0%
TATGCACTTGGAGAGTCTGG+TGG - chr8_2:62538223-62538242 Msa1260490:intron 50.0%
TGAGGAAGACACAGGGAGAT+TGG + chr8_2:62538671-62538690 None:intergenic 50.0%
CGGTACGAGAGCTCCTTTCT+TGG + chr8_2:62534341-62534360 None:intergenic 55.0%
CCACCGGTAGCAGAGTCATT+AGG + chr8_2:62534686-62534705 None:intergenic 55.0%
CCTAATGACTCTGCTACCGG+TGG - chr8_2:62534683-62534702 Msa1260490:CDS 55.0%
CGCGCACACACACAGATACA+TGG + chr8_2:62535174-62535193 None:intergenic 55.0%
! GCGTGCGCGCTTGATTGTTT+TGG - chr8_2:62535193-62535212 Msa1260490:intron 55.0%
GAACAACGAGCAGCTGGAGT+TGG - chr8_2:62535803-62535822 Msa1260490:CDS 55.0%
CATGCCGAGCTAAGCAGGAA+AGG + chr8_2:62535946-62535965 None:intergenic 55.0%
ACCACCACTGGCCATACTGA+TGG - chr8_2:62536617-62536636 Msa1260490:intron 55.0%
TCCATCAGTATGGCCAGTGG+TGG + chr8_2:62536621-62536640 None:intergenic 55.0%
! CAACTGGAGTGCCTCTGATC+TGG + chr8_2:62536682-62536701 None:intergenic 55.0%
!! ATCAGAGGCACTCCAGTTGC+AGG - chr8_2:62536683-62536702 Msa1260490:intron 55.0%
TTGGGCAATCCCACAGCTCA+GGG + chr8_2:62537186-62537205 None:intergenic 55.0%
ATGTCAAGAGGGCTGAGCTC+TGG - chr8_2:62537688-62537707 Msa1260490:intron 55.0%
ACTCTTGAGGGCTTCTCCCT+TGG - chr8_2:62537971-62537990 Msa1260490:intron 55.0%
TTCAGCCCCAAGCTGCTATG+AGG - chr8_2:62538344-62538363 Msa1260490:CDS 55.0%
TCGTAGGGAACAGTGTGGCA+TGG - chr8_2:62538434-62538453 Msa1260490:CDS 55.0%
TTCCGCATCCTGAGGCAGCT+CGG - chr8_2:62534620-62534639 Msa1260490:CDS 60.0%
ATCCTGAGGCAGCTCGGAGA+AGG - chr8_2:62534626-62534645 Msa1260490:CDS 60.0%
! ACGAGCAGCTGGAGTTGGTC+AGG - chr8_2:62535808-62535827 Msa1260490:CDS 60.0%
! CGAGCAGCTGGAGTTGGTCA+GGG - chr8_2:62535809-62535828 Msa1260490:CDS 60.0%
TTCATCAGGGGAGGGCGACT+AGG - chr8_2:62536205-62536224 Msa1260490:intron 60.0%
TCATCAGGGGAGGGCGACTA+GGG - chr8_2:62536206-62536225 Msa1260490:intron 60.0%
TTTCCGAGCCCCTGAGCTGT+GGG - chr8_2:62537174-62537193 Msa1260490:CDS 60.0%
AATCCCACAGCTCAGGGGCT+CGG + chr8_2:62537180-62537199 None:intergenic 60.0%
TGGGCAATCCCACAGCTCAG+GGG + chr8_2:62537185-62537204 None:intergenic 60.0%
CTTGGGCAATCCCACAGCTC+AGG + chr8_2:62537187-62537206 None:intergenic 60.0%
!! AAGAGGGCTGAGCTCTGGAG+AGG - chr8_2:62537693-62537712 Msa1260490:intron 60.0%
!! AGAGGGCTGAGCTCTGGAGA+GGG - chr8_2:62537694-62537713 Msa1260490:intron 60.0%
GTCTGGTGGAAGCCTGCAAC+TGG - chr8_2:62538237-62538256 Msa1260490:intron 60.0%
GCTCAGGTCAAATGGCCAGC+TGG - chr8_2:62538271-62538290 Msa1260490:intron 60.0%
CTCCGAGCTGCCTCAGGATG+CGG + chr8_2:62534625-62534644 None:intergenic 65.0%
CACCTTCTCCGAGCTGCCTC+AGG + chr8_2:62534631-62534650 None:intergenic 65.0%
CTGAGGCAGCTCGGAGAAGG+TGG - chr8_2:62534629-62534648 Msa1260490:CDS 65.0%
! GCAGCTGGAGTTGGTCAGGG+AGG - chr8_2:62535812-62535831 Msa1260490:CDS 65.0%
TTGGCAGTGCTCGTCCCGCA+AGG - chr8_2:62536643-62536662 Msa1260490:intron 65.0%
CACAGCTCAGGGGCTCGGAA+AGG + chr8_2:62537175-62537194 None:intergenic 65.0%
CTTTCCGAGCCCCTGAGCTG+TGG - chr8_2:62537173-62537192 Msa1260490:CDS 65.0%
!! GAGGGCTGAGCTCTGGAGAG+GGG - chr8_2:62537695-62537714 Msa1260490:intron 65.0%
CGGGGCCTCATAGCAGCTTG+GGG + chr8_2:62538352-62538371 None:intergenic 65.0%
CCGGGGCCTCATAGCAGCTT+GGG + chr8_2:62538353-62538372 None:intergenic 65.0%
CCCAAGCTGCTATGAGGCCC+CGG - chr8_2:62538350-62538369 Msa1260490:CDS 65.0%
TCCGGGGCCTCATAGCAGCT+TGG + chr8_2:62538354-62538373 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 62534280 62538744 62534280 ID=Msa1260490;Name=Msa1260490
chr8_2 mRNA 62534280 62538744 62534280 ID=Msa1260490-mRNA-1;Parent=Msa1260490;Name=Msa1260490-mRNA-1;_AED=0.04;_eAED=0.04;_QI=259|1|1|1|1|1|6|318|342
chr8_2 exon 62534280 62534823 62534280 ID=Msa1260490-mRNA-1:exon:19838;Parent=Msa1260490-mRNA-1
chr8_2 exon 62535755 62535879 62535755 ID=Msa1260490-mRNA-1:exon:19837;Parent=Msa1260490-mRNA-1
chr8_2 exon 62536320 62536505 62536320 ID=Msa1260490-mRNA-1:exon:19836;Parent=Msa1260490-mRNA-1
chr8_2 exon 62536868 62537011 62536868 ID=Msa1260490-mRNA-1:exon:19835;Parent=Msa1260490-mRNA-1
chr8_2 exon 62537116 62537258 62537116 ID=Msa1260490-mRNA-1:exon:19834;Parent=Msa1260490-mRNA-1
chr8_2 exon 62538281 62538744 62538281 ID=Msa1260490-mRNA-1:exon:19833;Parent=Msa1260490-mRNA-1
chr8_2 five_prime_UTR 62538486 62538744 62538486 ID=Msa1260490-mRNA-1:five_prime_utr;Parent=Msa1260490-mRNA-1
chr8_2 CDS 62538281 62538485 62538281 ID=Msa1260490-mRNA-1:cds;Parent=Msa1260490-mRNA-1
chr8_2 CDS 62537116 62537258 62537116 ID=Msa1260490-mRNA-1:cds;Parent=Msa1260490-mRNA-1
chr8_2 CDS 62536868 62537011 62536868 ID=Msa1260490-mRNA-1:cds;Parent=Msa1260490-mRNA-1
chr8_2 CDS 62536320 62536505 62536320 ID=Msa1260490-mRNA-1:cds;Parent=Msa1260490-mRNA-1
chr8_2 CDS 62535755 62535879 62535755 ID=Msa1260490-mRNA-1:cds;Parent=Msa1260490-mRNA-1
chr8_2 CDS 62534598 62534823 62534598 ID=Msa1260490-mRNA-1:cds;Parent=Msa1260490-mRNA-1
chr8_2 three_prime_UTR 62534280 62534597 62534280 ID=Msa1260490-mRNA-1:three_prime_utr;Parent=Msa1260490-mRNA-1
Gene Sequence

>Msa1260490

ATGGGTTGCTCATTCTCCGGTTTAAATGCATTATATGATTCTGTGAACGGAGGTGGTGATGTTTGGATCAACGAGAATCGATTCCGCATCCTGAGGCAGCTCGGAGAAGGTGGCTTTGCTTACGTTTATCTCGTTAAGGAAGCTCCTAATGACTCTGCTACCGGTGGTCTCGCTAATAAGCTCAAAGACTCTTCTCATCTCGCAGATGATGGATCTTATGCTATGAAAAAGGTCCTCATTCAGAACAACGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCGCGTCTCTTCACTGTTTAGTCACCCCAATCTCCTCCCACTTCTTGATCATGCAATCATATCTGTTAAGCCTACTCAAGAAACATCTTGGACCCATGAAGCGTACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAGAAGGAACACTATTCCACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTAAAGCACATGCACAATTTAGATCCTCCTTATGCTCACAATGATGTCAAACCTGGTAATGTTCTCATAACACACAGAAAAGGACAACCACCACTGGCCATACTGATGGATTTTGGCAGTGCTCGTCCCGCAAGGAAGAAGATTAGCTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATGTCTCTGCTCCTTTCCGAGCCCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGACGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCGTTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAACTGGCTATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACTTAAACCTTCATATCCAGAAGCTCTTCATCAGTTCGTGTCATGGATGCTTCAGCCCCAAGCTGCTATGAGGCCCCGGATAGACGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCAATGA
Protein sequence

>Msa1260490

MGCSFSGLNALYDSVNGGGDVWINENRFRILRQLGEGGFAYVYLVKEAPNDSATGGLANKLKDSSHLADDGSYAMKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTQETSWTHEAYLLFPVHLDGTLLDNAKTMKAKKEHYSTSDVLQIFRQLCAGLKHMHNLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKKISSRSEALQLQEWASEHVSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGLKPSYPEALHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSQ*