AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0238840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238840 MtrunA17_Chr2g0289121 86.963 629 58 5 111 729 213 827 0.0 1079
Msa0238840 MtrunA17_Chr2g0289121 72.000 150 21 3 1 130 10 158 9.39e-49 184
Msa0238840 MtrunA17_Chr4g0075261 61.329 662 197 9 110 727 224 870 0.0 789
Msa0238840 MtrunA17_Chr2g0289031 83.123 397 66 1 329 725 2 397 0.0 666
Msa0238840 MtrunA17_Chr1g0211711 48.550 655 288 8 110 721 400 1048 0.0 583
Msa0238840 MtrunA17_Chr1g0183311 47.951 659 267 9 135 721 225 879 0.0 574
Msa0238840 MtrunA17_Chr5g0426961 48.830 641 294 9 110 721 197 832 0.0 562
Msa0238840 MtrunA17_Chr5g0420361 46.625 637 269 16 131 705 152 779 1.87e-171 512
Msa0238840 MtrunA17_Chr6g0472441 41.203 665 285 18 112 705 72 701 2.09e-147 447
Msa0238840 MtrunA17_Chr1g0211661 43.792 596 282 12 110 664 282 865 1.09e-143 442
Msa0238840 MtrunA17_Chr8g0361381 86.449 214 23 2 306 519 1 208 1.28e-124 370
Msa0238840 MtrunA17_Chr1g0192011 34.347 658 349 11 123 724 333 963 8.12e-123 391
Msa0238840 MtrunA17_Chr1g0211691 44.528 530 235 12 135 612 423 945 2.88e-116 372
Msa0238840 MtrunA17_Chr7g0275771 41.228 456 231 7 130 549 212 666 6.17e-109 353
Msa0238840 MtrunA17_Chr7g0275771 50.679 221 96 3 503 723 719 926 1.35e-57 211
Msa0238840 MtrunA17_Chr2g0289041 88.824 170 16 1 111 280 38 204 1.96e-102 312
Msa0238840 MtrunA17_Chr5g0448301 41.478 487 228 12 182 634 168 631 1.45e-101 325
Msa0238840 MtrunA17_Chr2g0281051 32.253 679 366 13 129 720 282 953 1.04e-96 320
Msa0238840 MtrunA17_Chr1g0147021 41.986 443 214 8 130 552 944 1363 9.36e-96 326
Msa0238840 MtrunA17_Chr1g0147021 61.146 157 61 0 572 728 1546 1702 1.28e-54 204
Msa0238840 MtrunA17_Chr2g0289101 91.304 138 11 1 186 322 8 145 1.78e-84 264
Msa0238840 MtrunA17_Chr2g0289091 89.630 135 14 0 408 542 20 154 2.57e-81 265
Msa0238840 MtrunA17_Chr2g0289091 84.354 147 12 2 550 686 275 420 1.04e-76 253
Msa0238840 MtrunA17_Chr8g0361391 65.426 188 13 4 553 730 18 163 2.14e-70 227
Msa0238840 MtrunA17_Chr1g0211701 70.536 112 33 0 610 721 4 115 4.50e-47 164
Msa0238840 MtrunA17_Chr4g0048531 35.691 311 166 7 261 547 718 1018 6.85e-47 180
Msa0238840 MtrunA17_Chr4g0048531 43.005 193 93 3 547 723 1087 1278 1.09e-40 161
Msa0238840 MtrunA17_Chr4g0048531 34.135 208 114 5 84 287 312 500 6.23e-21 98.6
Msa0238840 MtrunA17_Chr7g0231061 49.032 155 79 0 398 552 12 166 4.60e-45 160
Msa0238840 MtrunA17_Chr8g0340381 63.218 87 28 2 432 518 36 118 5.41e-29 114
Msa0238840 MtrunA17_Chr8g0364421 32.636 239 133 5 162 389 3 224 9.78e-25 103
Msa0238840 MtrunA17_Chr1g0211671 59.322 59 24 0 663 721 15 73 6.42e-17 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238840 AT1G11950.1 54.936 628 262 8 111 724 251 871 0.0 697
Msa0238840 AT1G11950.3 54.936 628 262 8 111 724 251 871 0.0 697
Msa0238840 AT1G62310.1 55.665 609 248 4 118 705 271 878 0.0 672
Msa0238840 AT1G11950.2 52.330 558 245 8 111 654 251 801 0.0 581
Msa0238840 AT3G07610.1 47.295 499 216 8 255 722 410 892 4.03e-139 435
Msa0238840 AT3G07610.1 44.262 122 67 1 119 239 219 340 1.04e-22 104
Msa0238840 AT3G07610.3 44.595 518 224 9 255 722 410 914 1.20e-129 410
Msa0238840 AT3G07610.3 44.262 122 67 1 119 239 219 340 9.97e-23 104
Msa0238840 AT4G00990.3 44.111 433 206 9 130 539 154 573 7.30e-108 346
Msa0238840 AT4G00990.3 58.333 96 40 0 575 670 683 778 7.78e-30 126
Msa0238840 AT4G00990.2 44.111 433 206 9 130 539 154 573 7.80e-108 346
Msa0238840 AT4G00990.2 62.500 88 33 0 575 662 683 770 4.30e-29 124
Msa0238840 AT4G00990.1 44.111 433 206 9 130 539 154 573 1.20e-107 347
Msa0238840 AT4G00990.1 56.863 153 66 0 575 727 683 835 6.78e-52 194
Msa0238840 AT1G09060.2 31.269 662 354 13 123 724 273 893 4.98e-94 313
Msa0238840 AT1G09060.1 31.269 662 354 13 123 724 273 893 4.98e-94 313
Msa0238840 AT1G09060.4 31.269 662 354 13 123 724 287 907 6.10e-94 313
Msa0238840 AT1G09060.3 31.269 662 354 13 123 724 287 907 6.10e-94 313
Msa0238840 AT4G21430.1 29.072 657 376 15 126 728 299 919 3.60e-73 256
Msa0238840 AT3G07610.2 41.237 291 141 5 255 525 410 690 8.58e-59 213
Msa0238840 AT3G07610.2 44.262 122 67 1 119 239 219 340 2.10e-22 103

Find 116 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGTTATACCTTGTATTT+TGG 0.175006 2_2:+12698044 None:intergenic
AAGATTAAAATTTATATAAA+AGG 0.198623 2_2:-12699052 Msa0238840:CDS
CCACAACCACCTAGTTCTTT+TGG 0.232816 2_2:+12697413 None:intergenic
ATAAGTATGCCTAAATTCTT+TGG 0.242870 2_2:+12696215 None:intergenic
CATATTTCAAAGGAACATTT+AGG 0.255943 2_2:+12697635 None:intergenic
CAGATTTCGAGTGACCTTAT+AGG 0.271177 2_2:-12697227 Msa0238840:CDS
TCTCTTGCCCTGTGATTCTT+AGG 0.277632 2_2:+12695652 None:intergenic
AAGAAGAGAAGAGTTGAAAA+TGG 0.299932 2_2:-12698884 Msa0238840:CDS
AGGAATGTTGGATAATATAT+TGG 0.300780 2_2:-12698720 Msa0238840:intron
GAGGGTCTTGTTCAAGATAA+TGG 0.306737 2_2:-12696354 Msa0238840:CDS
TTACTTGTATCGCAAGTTAT+TGG 0.320991 2_2:+12697503 None:intergenic
GAAAACACTCCAAAGAATTT+AGG 0.338721 2_2:-12696224 Msa0238840:CDS
AGTACCATAGTTCTTTGATT+TGG 0.344680 2_2:+12698844 None:intergenic
AAGAAGCTAGAGGAAGAGTT+TGG 0.361005 2_2:-12696039 Msa0238840:intron
TGACCAAGTTGTTAAAGAAT+TGG 0.364202 2_2:-12695479 Msa0238840:CDS
AGATGGGAGGATATATAAAT+TGG 0.365687 2_2:-12697357 Msa0238840:CDS
ATCACTATTCACATTCCATT+TGG 0.366620 2_2:+12697454 None:intergenic
AGAAACAGCTGGTGCACTTT+GGG 0.368153 2_2:-12696292 Msa0238840:CDS
CTTCCAATTCTTTAACAACT+TGG 0.368676 2_2:+12695476 None:intergenic
TTGCGATACAAGTAATTTAG+AGG 0.380863 2_2:-12697495 Msa0238840:CDS
AGTTGCCACCAAATGTTATA+AGG 0.385343 2_2:-12696680 Msa0238840:CDS
TCCTCTGCCAAGCTCTTCTC+TGG 0.390375 2_2:+12696620 None:intergenic
GACACTCGCCAGTTCTTTGA+AGG 0.395120 2_2:-12696879 Msa0238840:CDS
AAAGAATTGGAAGCTTTCAT+TGG 0.399008 2_2:-12695466 Msa0238840:CDS
AGGTGTAGTACCTTTGACTT+TGG 0.407243 2_2:-12695936 Msa0238840:CDS
GTTGGGAGCCAATGGTTACT+TGG 0.413326 2_2:-12697118 Msa0238840:CDS
ATTTAGGACAGCTTCTATAA+AGG 0.417061 2_2:+12697651 None:intergenic
TTATCATGACATGGAGTTTG+TGG 0.423540 2_2:+12697919 None:intergenic
ATTACCAAATCAAAGAACTA+TGG 0.426043 2_2:-12698848 Msa0238840:CDS
CTTTATAACCTTCAAAGAAC+TGG 0.427941 2_2:+12696871 None:intergenic
TGTACAGGCTATTGATTGCT+TGG 0.428553 2_2:-12697042 Msa0238840:CDS
CACCGTTCCTCCAATACTCT+TGG 0.432232 2_2:+12697186 None:intergenic
GAGCACATAAGGCTCAAGAT+AGG 0.434348 2_2:-12696380 Msa0238840:CDS
AAGTCAGGCCTTATAACATT+TGG 0.438608 2_2:+12696672 None:intergenic
AATTTATATATCCTCCCATC+TGG 0.440912 2_2:+12697359 None:intergenic
ATCAAAACGCTCAAGAGATT+CGG 0.447503 2_2:-12698915 Msa0238840:CDS
GTGATAGATGATGGCACAAA+AGG 0.451379 2_2:+12696327 None:intergenic
ACTTTGCAGTATCTTCTCTT+CGG 0.452091 2_2:+12696262 None:intergenic
TTGACTTTGGAGCAGAAACT+TGG 0.452525 2_2:-12695923 Msa0238840:CDS
CAGAAACAGCTGGTGCACTT+TGG 0.453707 2_2:-12696293 Msa0238840:CDS
ATGTTGAGATATTTACCAAA+TGG 0.459203 2_2:-12697469 Msa0238840:CDS
TATTTAAATTCCAAGAGTAT+TGG 0.460840 2_2:-12697196 Msa0238840:CDS
AGAACGTCAGATATTAGAAC+AGG 0.460930 2_2:+12697161 None:intergenic
GTATTTCTTTGCAACAACTA+AGG 0.462093 2_2:+12697612 None:intergenic
GGATCGCAATACTCTTGAAA+TGG 0.475406 2_2:+12696732 None:intergenic
TTAAATTCCAAGAGTATTGG+AGG 0.475955 2_2:-12697193 Msa0238840:CDS
AAATGATAATTCAAATGTAC+AGG 0.476218 2_2:-12697057 Msa0238840:CDS
CACAAGAAAATAAAACTTGA+AGG 0.478550 2_2:-12698812 Msa0238840:CDS
TTATTGTTCTCCAGTAAAAG+AGG 0.483787 2_2:-12696196 Msa0238840:intron
GTAGTAAATTAATCATATAT+CGG 0.484803 2_2:+12698121 None:intergenic
GTCAAGAAGCAAAGGAATGT+TGG 0.491438 2_2:-12698732 Msa0238840:CDS
GTTCTTTGAAGGTTATAAAG+AGG 0.497551 2_2:-12696868 Msa0238840:CDS
GTCGACTTCCTAAGAATCAC+AGG 0.505039 2_2:-12695660 Msa0238840:CDS
ACACCTTCAGATTTCTCACT+TGG 0.506166 2_2:+12695867 None:intergenic
AACAAGGGACAGGATTGAGT+TGG 0.510060 2_2:-12697136 Msa0238840:CDS
GTATCGCAAGTTATTGGTAG+AGG 0.513590 2_2:+12697509 None:intergenic
ACAAACTCCATGTCATGATA+AGG 0.516847 2_2:-12697917 Msa0238840:CDS
TGGTTGTGGTGGCTGTGTGA+TGG 0.522574 2_2:-12697399 Msa0238840:CDS
AGGATTGAGTTGGGAGCCAA+TGG 0.523462 2_2:-12697126 Msa0238840:CDS
TTCAGATTTCTCACTTGGTG+AGG 0.524957 2_2:+12695872 None:intergenic
AGCACATAAGGCTCAAGATA+GGG 0.524973 2_2:-12696379 Msa0238840:CDS
GAGTATTGCGATCCTCGAGC+TGG 0.528942 2_2:-12696723 Msa0238840:CDS
TCAGGCCTTATAACATTTGG+TGG 0.529368 2_2:+12696675 None:intergenic
ACAAGGGACAGGATTGAGTT+GGG 0.531143 2_2:-12697135 Msa0238840:CDS
TCAGATTTCTCACTTGGTGA+GGG 0.534163 2_2:+12695873 None:intergenic
CTGAAACGCATTCTTCCAGA+TGG 0.536903 2_2:-12697374 Msa0238840:CDS
ATGATAAGGAGCGTATGTAT+TGG 0.537974 2_2:-12697903 Msa0238840:intron
ACCAGAGAAGAGCTTGGCAG+AGG 0.538284 2_2:-12696621 Msa0238840:CDS
CTTTGTGTCACCAGAAAATG+TGG 0.546636 2_2:-12695713 Msa0238840:CDS
GACGTTCTCAAACAAGGGAC+AGG 0.546938 2_2:-12697146 Msa0238840:CDS
GAGATTGAAGCCAAAATACA+AGG 0.547821 2_2:-12698054 Msa0238840:intron
ACTTGGTGAGGGCATCCAGC+AGG 0.549347 2_2:+12695884 None:intergenic
AATGTTATAAGGCCTGACTT+AGG 0.554124 2_2:-12696669 Msa0238840:CDS
TTCTTTGAAGGTTATAAAGA+GGG 0.554859 2_2:-12696867 Msa0238840:CDS
ATATCTGACGTTCTCAAACA+AGG 0.554941 2_2:-12697152 Msa0238840:CDS
TTCCAAGAGTATTGGAGGAA+CGG 0.556361 2_2:-12697188 Msa0238840:CDS
CCAAAAGAACTAGGTGGTTG+TGG 0.561255 2_2:-12697413 Msa0238840:CDS
ACAACTAAGGCATATTTCAA+AGG 0.561651 2_2:+12697625 None:intergenic
TATCTGACGTTCTCAAACAA+GGG 0.569647 2_2:-12697151 Msa0238840:CDS
AAAACAAAAGAATGTTGAGA+AGG 0.573446 2_2:-12697291 Msa0238840:CDS
AATGCTCTCCAAGTAACCAT+TGG 0.575828 2_2:+12697110 None:intergenic
TGAAACTTCATTTCAAAGCG+TGG 0.577340 2_2:+12697572 None:intergenic
TGATTGCTTGGCTAGTTGTG+AGG 0.579197 2_2:-12697030 Msa0238840:intron
TAACAACTTGGTCAACAGCA+TGG 0.580070 2_2:+12695488 None:intergenic
ATGACAAAGTCAAGAAGCAA+AGG 0.583092 2_2:-12698740 Msa0238840:CDS
AGATGCTCAAGCTAAAAGAC+TGG 0.588373 2_2:-12696818 Msa0238840:CDS
TAAGGCTCAAGATAGGGAAG+AGG 0.594993 2_2:-12696373 Msa0238840:CDS
AAATGGAATGTGAATAGTGA+TGG 0.595578 2_2:-12697452 Msa0238840:CDS
TTGGTGGCAACTTTGCAGCA+AGG 0.598809 2_2:+12696691 None:intergenic
AACGGATAAACTCGTCACAA+TGG 0.599920 2_2:+12696760 None:intergenic
TGCGATACAAGTAATTTAGA+GGG 0.601791 2_2:-12697494 Msa0238840:CDS
AAAGATACATCAGAAACAGC+TGG 0.604136 2_2:-12696303 Msa0238840:CDS
GGTATCTCAATCTCTGAACA+TGG 0.604496 2_2:+12697940 None:intergenic
GAAGCAGTATTTATACCTGC+TGG 0.606997 2_2:-12695899 Msa0238840:CDS
AGTTTCTGCTCCAAAGTCAA+AGG 0.611547 2_2:+12695926 None:intergenic
TATGGAACCAGAGAAGAGCT+TGG 0.615802 2_2:-12696627 Msa0238840:CDS
AAGGCTCAAGATAGGGAAGA+GGG 0.620022 2_2:-12696372 Msa0238840:CDS
TGAGCATAAGAAGAAGCTAG+AGG 0.629510 2_2:-12696049 Msa0238840:CDS
GAATGTGCTCCAAAAGAACT+AGG 0.632610 2_2:-12697422 Msa0238840:CDS
TCACCAAGTGAGAAATCTGA+AGG 0.633939 2_2:-12695870 Msa0238840:intron
TAAGGTCACTCGAAATCTGA+CGG 0.639398 2_2:+12697231 None:intergenic
AACGCATTCTTCCAGATGGG+AGG 0.648445 2_2:-12697370 Msa0238840:CDS
ACTCTTGAAATGGCAAACAA+CGG 0.653289 2_2:+12696742 None:intergenic
ATACGCTCCTTATCATGACA+TGG 0.656480 2_2:+12697910 None:intergenic
TGAAACGCATTCTTCCAGAT+GGG 0.664559 2_2:-12697373 Msa0238840:CDS
AGGTTGAGAATTCCAGCTCG+AGG 0.678355 2_2:+12696711 None:intergenic
TGTTGCAAAGAAATACGCAA+CGG 0.692822 2_2:-12697605 Msa0238840:CDS
TCATTGTGATATTGCAGACG+CGG 0.702116 2_2:-12696580 Msa0238840:intron
GGTCTTGTTCAAGATAATGG+AGG 0.703775 2_2:-12696351 Msa0238840:CDS
AAAGAACTAGGTGGTTGTGG+TGG 0.707130 2_2:-12697410 Msa0238840:CDS
AGAGGTGATGAATACATGCA+TGG 0.707440 2_2:-12697539 Msa0238840:CDS
ATAAACTCGTCACAATGGCG+CGG 0.715284 2_2:+12696765 None:intergenic
TCGACTTCCTAAGAATCACA+GGG 0.715729 2_2:-12695659 Msa0238840:CDS
GGCAAGAGAAGACAAACTTG+AGG 0.737690 2_2:-12695638 Msa0238840:intron
TGTGCTCCAAAAGAACTAGG+TGG 0.792037 2_2:-12697419 Msa0238840:CDS
GGTGATGAATACATGCATGG+TGG 0.798300 2_2:-12697536 Msa0238840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAAGAGAAATAAATAT+TGG + chr2_2:12697584-12697603 None:intergenic 10.0%
!! TTAATTATTGTGTTTATTTA+TGG - chr2_2:12698943-12698962 Msa0238840:CDS 10.0%
!! TAATTATTGTGTTTATTTAT+GGG - chr2_2:12698944-12698963 Msa0238840:CDS 10.0%
!! AATTTGTGTTAAATAATTAC+AGG - chr2_2:12695880-12695899 Msa0238840:CDS 15.0%
!! GTAGTAAATTAATCATATAT+CGG + chr2_2:12696384-12696403 None:intergenic 15.0%
!!! TCTTTTGTATTTTGTTTTTT+TGG - chr2_2:12696796-12696815 Msa0238840:CDS 15.0%
!! AATTATTGTGTTTATTTATG+GGG - chr2_2:12698945-12698964 Msa0238840:CDS 15.0%
!!! ACATGTTTTGATATTTTGTT+TGG + chr2_2:12695909-12695928 None:intergenic 20.0%
!!! GTTTAAGATGTATTAAAGAT+TGG - chr2_2:12695993-12696012 Msa0238840:intron 20.0%
!!! TTTTTTTCATTTTTGCACAT+AGG - chr2_2:12696115-12696134 Msa0238840:intron 20.0%
!! CATTAGAGAAACAAATTTAA+GGG + chr2_2:12696265-12696284 None:intergenic 20.0%
!! TCATTAGAGAAACAAATTTA+AGG + chr2_2:12696266-12696285 None:intergenic 20.0%
!!! TAAATTTTCCAAACTATTAC+TGG - chr2_2:12696698-12696717 Msa0238840:CDS 20.0%
!! AAGTTTCAATACAAAAATAG+AGG - chr2_2:12696945-12696964 Msa0238840:intron 20.0%
!!! TAAATAGCTTTTTTCCTATA+AGG + chr2_2:12697292-12697311 None:intergenic 20.0%
!!! TATTTAAATTCCAAGAGTAT+TGG - chr2_2:12697306-12697325 Msa0238840:CDS 20.0%
!! AAATGATAATTCAAATGTAC+AGG - chr2_2:12697445-12697464 Msa0238840:CDS 20.0%
!! GAAGAAGATATAAAAATTTC+TGG - chr2_2:12697657-12697676 Msa0238840:CDS 20.0%
!!! TATTGTTCAATAATTTTGAC+AGG - chr2_2:12698027-12698046 Msa0238840:intron 20.0%
!!! AAAAATAAAAAGAGCACATA+AGG - chr2_2:12698111-12698130 Msa0238840:CDS 20.0%
!!! TAATAAAATACCTCTTTTAC+TGG + chr2_2:12698319-12698338 None:intergenic 20.0%
!!! TCACATATAATCAACATTTT+CGG - chr2_2:12698339-12698358 Msa0238840:intron 20.0%
!! CAAAAGTCAAATAAAAACAT+TGG + chr2_2:12698435-12698454 None:intergenic 20.0%
!! ATTATTGTGTTTATTTATGG+GGG - chr2_2:12698946-12698965 Msa0238840:CDS 20.0%
!! ATCAACAATCTGAGTTTTTA+AGG - chr2_2:12695481-12695500 Msa0238840:CDS 25.0%
! ATTACCAAATCAAAGAACTA+TGG - chr2_2:12695654-12695673 Msa0238840:CDS 25.0%
! CACAAGAAAATAAAACTTGA+AGG - chr2_2:12695690-12695709 Msa0238840:CDS 25.0%
! AGGAATGTTGGATAATATAT+TGG - chr2_2:12695782-12695801 Msa0238840:intron 25.0%
!! TTCCTTTATGACAACTATTT+TGG - chr2_2:12695832-12695851 Msa0238840:intron 25.0%
! AACCAAAATAGTTGTCATAA+AGG + chr2_2:12695837-12695856 None:intergenic 25.0%
! TTTGTACAAGATACAAATTG+TGG + chr2_2:12695956-12695975 None:intergenic 25.0%
!! ATTAAAGATTGGTACGTTTT+AGG - chr2_2:12696004-12696023 Msa0238840:intron 25.0%
! TATTAACAAATATGTGACCT+TGG + chr2_2:12696049-12696068 None:intergenic 25.0%
! ATATCTCCAATTGACATATT+GGG + chr2_2:12696144-12696163 None:intergenic 25.0%
! TCAAAAATTAAGCAAAGAGA+TGG + chr2_2:12696409-12696428 None:intergenic 25.0%
!! TGAAGTTATACCTTGTATTT+TGG + chr2_2:12696461-12696480 None:intergenic 25.0%
! ATATGAGAGTTTATTGTTAG+TGG + chr2_2:12696534-12696553 None:intergenic 25.0%
! TAACAATAAACTCTCATATC+AGG - chr2_2:12696535-12696554 Msa0238840:intron 25.0%
! TGCAACATAGTAAGTATAAA+AGG + chr2_2:12696643-12696662 None:intergenic 25.0%
! CATATTTCAAAGGAACATTT+AGG + chr2_2:12696870-12696889 None:intergenic 25.0%
! ATGTTGAGATATTTACCAAA+TGG - chr2_2:12697033-12697052 Msa0238840:CDS 25.0%
! AAAACAAAAGAATGTTGAGA+AGG - chr2_2:12697211-12697230 Msa0238840:CDS 25.0%
! TTTCGTAGTTAAATTTCCTT+TGG - chr2_2:12697500-12697519 Msa0238840:CDS 25.0%
!! TTCTTTGAAGGTTATAAAGA+GGG - chr2_2:12697635-12697654 Msa0238840:CDS 25.0%
!! ACATTTTCAAACTCATCATA+AGG + chr2_2:12697713-12697732 None:intergenic 25.0%
!!! TATTTTGACTCATATAACTG+AGG - chr2_2:12698054-12698073 Msa0238840:intron 25.0%
! ATAAGTATGCCTAAATTCTT+TGG + chr2_2:12698290-12698309 None:intergenic 25.0%
! TAAAAACATTGGTCATGAAT+AGG + chr2_2:12698424-12698443 None:intergenic 25.0%
! CAAGATTCTTAATCAATTAC+AGG - chr2_2:12698546-12698565 Msa0238840:intron 25.0%
!!! ACATACATGTACTTTTAAAG+AGG + chr2_2:12698681-12698700 None:intergenic 25.0%
! CACAATAATTAAGCAAAGTT+TGG + chr2_2:12698935-12698954 None:intergenic 25.0%
!! GTGATATTTTTCTATGAAAC+AGG - chr2_2:12698975-12698994 Msa0238840:CDS 25.0%
AAGAAGAGAAGAGTTGAAAA+TGG - chr2_2:12695618-12695637 Msa0238840:intron 30.0%
AGTACCATAGTTCTTTGATT+TGG + chr2_2:12695661-12695680 None:intergenic 30.0%
!! TTTTGAAGATGAAGAAGATG+AGG - chr2_2:12695722-12695741 Msa0238840:CDS 30.0%
ACATCTAAATAACCATTCCA+AGG - chr2_2:12696029-12696048 Msa0238840:intron 30.0%
TATCTCCAATTGACATATTG+GGG + chr2_2:12696143-12696162 None:intergenic 30.0%
GATATCTCCAATTGACATAT+TGG + chr2_2:12696145-12696164 None:intergenic 30.0%
CATTGCAATTGCAATTCTTA+CGG + chr2_2:12696188-12696207 None:intergenic 30.0%
AATGTTTGCTTGTGTTCAAA+AGG - chr2_2:12696204-12696223 Msa0238840:CDS 30.0%
! ATTTAGGACAGCTTCTATAA+AGG + chr2_2:12696854-12696873 None:intergenic 30.0%
ACAACTAAGGCATATTTCAA+AGG + chr2_2:12696880-12696899 None:intergenic 30.0%
GTATTTCTTTGCAACAACTA+AGG + chr2_2:12696893-12696912 None:intergenic 30.0%
TTACTTGTATCGCAAGTTAT+TGG + chr2_2:12697002-12697021 None:intergenic 30.0%
TTGCGATACAAGTAATTTAG+AGG - chr2_2:12697007-12697026 Msa0238840:intron 30.0%
TGCGATACAAGTAATTTAGA+GGG - chr2_2:12697008-12697027 Msa0238840:intron 30.0%
ATCACTATTCACATTCCATT+TGG + chr2_2:12697051-12697070 None:intergenic 30.0%
AAATGGAATGTGAATAGTGA+TGG - chr2_2:12697050-12697069 Msa0238840:CDS 30.0%
AATTTATATATCCTCCCATC+TGG + chr2_2:12697146-12697165 None:intergenic 30.0%
AGATGGGAGGATATATAAAT+TGG - chr2_2:12697145-12697164 Msa0238840:CDS 30.0%
!! TTAAATTCCAAGAGTATTGG+AGG - chr2_2:12697309-12697328 Msa0238840:CDS 30.0%
TTCTCTTTATAAACCTTTGC+AGG - chr2_2:12697592-12697611 Msa0238840:CDS 30.0%
CTTTATAACCTTCAAAGAAC+TGG + chr2_2:12697634-12697653 None:intergenic 30.0%
! GTTCTTTGAAGGTTATAAAG+AGG - chr2_2:12697634-12697653 Msa0238840:CDS 30.0%
! TTTTCAAACTCATCATAAGG+TGG + chr2_2:12697710-12697729 None:intergenic 30.0%
! CCATAAGCAATGTAAGTTTT+TGG + chr2_2:12697860-12697879 None:intergenic 30.0%
CCAAAAACTTACATTGCTTA+TGG - chr2_2:12697857-12697876 Msa0238840:intron 30.0%
! GTATCTTTTGTGATAGATGA+TGG + chr2_2:12698187-12698206 None:intergenic 30.0%
GAAAACACTCCAAAGAATTT+AGG - chr2_2:12698278-12698297 Msa0238840:intron 30.0%
TTATTGTTCTCCAGTAAAAG+AGG - chr2_2:12698306-12698325 Msa0238840:intron 30.0%
AACCTAAGAAACAAAGAAGT+TGG + chr2_2:12698395-12698414 None:intergenic 30.0%
! ATGCATATATCCACATTTTC+TGG + chr2_2:12698802-12698821 None:intergenic 30.0%
TGGAATTCACATCAAAAGAA+AGG + chr2_2:12698915-12698934 None:intergenic 30.0%
TGACCAAGTTGTTAAAGAAT+TGG - chr2_2:12699023-12699042 Msa0238840:CDS 30.0%
CTTCCAATTCTTTAACAACT+TGG + chr2_2:12699029-12699048 None:intergenic 30.0%
AAAGAATTGGAAGCTTTCAT+TGG - chr2_2:12699036-12699055 Msa0238840:CDS 30.0%
ATCAAAACGCTCAAGAGATT+CGG - chr2_2:12695587-12695606 Msa0238840:intron 35.0%
ATGACAAAGTCAAGAAGCAA+AGG - chr2_2:12695762-12695781 Msa0238840:intron 35.0%
ACAAATATGTGACCTTGGAA+TGG + chr2_2:12696044-12696063 None:intergenic 35.0%
TTGCAATTCTTACGGCAAAA+GGG + chr2_2:12696180-12696199 None:intergenic 35.0%
ATTGCAATTCTTACGGCAAA+AGG + chr2_2:12696181-12696200 None:intergenic 35.0%
GTGTTCAAAAGGAATGATCA+AGG - chr2_2:12696215-12696234 Msa0238840:CDS 35.0%
GAGATTGAAGCCAAAATACA+AGG - chr2_2:12696448-12696467 Msa0238840:CDS 35.0%
TTATCATGACATGGAGTTTG+TGG + chr2_2:12696586-12696605 None:intergenic 35.0%
ACAAACTCCATGTCATGATA+AGG - chr2_2:12696585-12696604 Msa0238840:CDS 35.0%
! ATGATAAGGAGCGTATGTAT+TGG - chr2_2:12696599-12696618 Msa0238840:CDS 35.0%
CGTCAATACCAGTAATAGTT+TGG + chr2_2:12696709-12696728 None:intergenic 35.0%
TGTTGCAAAGAAATACGCAA+CGG - chr2_2:12696897-12696916 Msa0238840:intron 35.0%
TGAAACTTCATTTCAAAGCG+TGG + chr2_2:12696933-12696952 None:intergenic 35.0%
AGAACGTCAGATATTAGAAC+AGG + chr2_2:12697344-12697363 None:intergenic 35.0%
ATATCTGACGTTCTCAAACA+AGG - chr2_2:12697350-12697369 Msa0238840:CDS 35.0%
TATCTGACGTTCTCAAACAA+GGG - chr2_2:12697351-12697370 Msa0238840:CDS 35.0%
! GTGTCAATTTTTACCTGCAA+AGG + chr2_2:12697608-12697627 None:intergenic 35.0%
ACTCTTGAAATGGCAAACAA+CGG + chr2_2:12697763-12697782 None:intergenic 35.0%
AGTTGCCACCAAATGTTATA+AGG - chr2_2:12697822-12697841 Msa0238840:intron 35.0%
! AAGTCAGGCCTTATAACATT+TGG + chr2_2:12697833-12697852 None:intergenic 35.0%
AATGTTATAAGGCCTGACTT+AGG - chr2_2:12697833-12697852 Msa0238840:intron 35.0%
!! TAAGTTTTTGGACCTAAGTC+AGG + chr2_2:12697848-12697867 None:intergenic 35.0%
CTGTACTTTCAACGCTATAT+TGG - chr2_2:12697971-12697990 Msa0238840:intron 35.0%
AAAGATACATCAGAAACAGC+TGG - chr2_2:12698199-12698218 Msa0238840:intron 35.0%
ACTTTGCAGTATCTTCTCTT+CGG + chr2_2:12698243-12698262 None:intergenic 35.0%
! CACCAACTTCTTTGTTTCTT+AGG - chr2_2:12698390-12698409 Msa0238840:intron 35.0%
GTCAAGAAGCAAAGGAATGT+TGG - chr2_2:12695770-12695789 Msa0238840:intron 40.0%
ATGTCATCAGTGCTTGAGAA+AGG - chr2_2:12695925-12695944 Msa0238840:CDS 40.0%
ATCAGTGCTTGAGAAAGGAT+AGG - chr2_2:12695930-12695949 Msa0238840:CDS 40.0%
AGGTACCCCAATATGTCAAT+TGG - chr2_2:12696135-12696154 Msa0238840:intron 40.0%
TGCAATTCTTACGGCAAAAG+GGG + chr2_2:12696179-12696198 None:intergenic 40.0%
GGTATCTCAATCTCTGAACA+TGG + chr2_2:12696565-12696584 None:intergenic 40.0%
ATACGCTCCTTATCATGACA+TGG + chr2_2:12696595-12696614 None:intergenic 40.0%
AGAGGTGATGAATACATGCA+TGG - chr2_2:12696963-12696982 Msa0238840:intron 40.0%
GTATCGCAAGTTATTGGTAG+AGG + chr2_2:12696996-12697015 None:intergenic 40.0%
GAATGTGCTCCAAAAGAACT+AGG - chr2_2:12697080-12697099 Msa0238840:CDS 40.0%
TGAAACGCATTCTTCCAGAT+GGG - chr2_2:12697129-12697148 Msa0238840:CDS 40.0%
TAAGGTCACTCGAAATCTGA+CGG + chr2_2:12697274-12697293 None:intergenic 40.0%
! CAGATTTCGAGTGACCTTAT+AGG - chr2_2:12697275-12697294 Msa0238840:CDS 40.0%
!! TTCCAAGAGTATTGGAGGAA+CGG - chr2_2:12697314-12697333 Msa0238840:CDS 40.0%
AATGCTCTCCAAGTAACCAT+TGG + chr2_2:12697395-12697414 None:intergenic 40.0%
! TGTACAGGCTATTGATTGCT+TGG - chr2_2:12697460-12697479 Msa0238840:CDS 40.0%
GTAAGAACGAACATCACCAA+AGG + chr2_2:12697519-12697538 None:intergenic 40.0%
!!! TCTTTTAGCTTGAGCATCTC+TGG + chr2_2:12697683-12697702 None:intergenic 40.0%
AGATGCTCAAGCTAAAAGAC+TGG - chr2_2:12697684-12697703 Msa0238840:intron 40.0%
AACGGATAAACTCGTCACAA+TGG + chr2_2:12697745-12697764 None:intergenic 40.0%
GGATCGCAATACTCTTGAAA+TGG + chr2_2:12697773-12697792 None:intergenic 40.0%
! TCAGGCCTTATAACATTTGG+TGG + chr2_2:12697830-12697849 None:intergenic 40.0%
TCATTGTGATATTGCAGACG+CGG - chr2_2:12697922-12697941 Msa0238840:CDS 40.0%
TTGGTGCGACAAGTATAAGA+TGG - chr2_2:12697990-12698009 Msa0238840:intron 40.0%
AGCACATAAGGCTCAAGATA+GGG - chr2_2:12698123-12698142 Msa0238840:CDS 40.0%
!! GAGGGTCTTGTTCAAGATAA+TGG - chr2_2:12698148-12698167 Msa0238840:CDS 40.0%
!! GGTCTTGTTCAAGATAATGG+AGG - chr2_2:12698151-12698170 Msa0238840:CDS 40.0%
! GTGATAGATGATGGCACAAA+AGG + chr2_2:12698178-12698197 None:intergenic 40.0%
TGAGCATAAGAAGAAGCTAG+AGG - chr2_2:12698453-12698472 Msa0238840:intron 40.0%
AAGAAGCTAGAGGAAGAGTT+TGG - chr2_2:12698463-12698482 Msa0238840:intron 40.0%
! AGGTGTAGTACCTTTGACTT+TGG - chr2_2:12698566-12698585 Msa0238840:intron 40.0%
AGTTTCTGCTCCAAAGTCAA+AGG + chr2_2:12698579-12698598 None:intergenic 40.0%
!! TTGACTTTGGAGCAGAAACT+TGG - chr2_2:12698579-12698598 Msa0238840:intron 40.0%
GAAGCAGTATTTATACCTGC+TGG - chr2_2:12698603-12698622 Msa0238840:intron 40.0%
! TCAGATTTCTCACTTGGTGA+GGG + chr2_2:12698632-12698651 None:intergenic 40.0%
! TTCAGATTTCTCACTTGGTG+AGG + chr2_2:12698633-12698652 None:intergenic 40.0%
TCACCAAGTGAGAAATCTGA+AGG - chr2_2:12698632-12698651 Msa0238840:intron 40.0%
ACACCTTCAGATTTCTCACT+TGG + chr2_2:12698638-12698657 None:intergenic 40.0%
CTTTGTGTCACCAGAAAATG+TGG - chr2_2:12698789-12698808 Msa0238840:CDS 40.0%
TCGACTTCCTAAGAATCACA+GGG - chr2_2:12698843-12698862 Msa0238840:CDS 40.0%
TAACAACTTGGTCAACAGCA+TGG + chr2_2:12699017-12699036 None:intergenic 40.0%
CAATTGGAGATATCGCAGAG+AGG - chr2_2:12696151-12696170 Msa0238840:intron 45.0%
GGTGATGAATACATGCATGG+TGG - chr2_2:12696966-12696985 Msa0238840:intron 45.0%
TGTGCTCCAAAAGAACTAGG+TGG - chr2_2:12697083-12697102 Msa0238840:CDS 45.0%
!! CCACAACCACCTAGTTCTTT+TGG + chr2_2:12697092-12697111 None:intergenic 45.0%
CCAAAAGAACTAGGTGGTTG+TGG - chr2_2:12697089-12697108 Msa0238840:CDS 45.0%
AAAGAACTAGGTGGTTGTGG+TGG - chr2_2:12697092-12697111 Msa0238840:CDS 45.0%
CTGAAACGCATTCTTCCAGA+TGG - chr2_2:12697128-12697147 Msa0238840:CDS 45.0%
AACAAGGGACAGGATTGAGT+TGG - chr2_2:12697366-12697385 Msa0238840:CDS 45.0%
ACAAGGGACAGGATTGAGTT+GGG - chr2_2:12697367-12697386 Msa0238840:CDS 45.0%
! TGATTGCTTGGCTAGTTGTG+AGG - chr2_2:12697472-12697491 Msa0238840:CDS 45.0%
ATAAACTCGTCACAATGGCG+CGG + chr2_2:12697740-12697759 None:intergenic 45.0%
TATGGAACCAGAGAAGAGCT+TGG - chr2_2:12697875-12697894 Msa0238840:intron 45.0%
GAGCACATAAGGCTCAAGAT+AGG - chr2_2:12698122-12698141 Msa0238840:CDS 45.0%
TAAGGCTCAAGATAGGGAAG+AGG - chr2_2:12698129-12698148 Msa0238840:CDS 45.0%
AAGGCTCAAGATAGGGAAGA+GGG - chr2_2:12698130-12698149 Msa0238840:CDS 45.0%
AGAAACAGCTGGTGCACTTT+GGG - chr2_2:12698210-12698229 Msa0238840:intron 45.0%
! GTCGACTTCCTAAGAATCAC+AGG - chr2_2:12698842-12698861 Msa0238840:CDS 45.0%
TCTCTTGCCCTGTGATTCTT+AGG + chr2_2:12698853-12698872 None:intergenic 45.0%
GGCAAGAGAAGACAAACTTG+AGG - chr2_2:12698864-12698883 Msa0238840:CDS 45.0%
!! AAGATTAAAATTTATATAAA+AGG - chr2_2:12695450-12695469 Msa0238840:CDS 5.0%
AACGCATTCTTCCAGATGGG+AGG - chr2_2:12697132-12697151 Msa0238840:CDS 50.0%
CACCGTTCCTCCAATACTCT+TGG + chr2_2:12697319-12697338 None:intergenic 50.0%
GACGTTCTCAAACAAGGGAC+AGG - chr2_2:12697356-12697375 Msa0238840:CDS 50.0%
!! AGGATTGAGTTGGGAGCCAA+TGG - chr2_2:12697376-12697395 Msa0238840:CDS 50.0%
GTTGGGAGCCAATGGTTACT+TGG - chr2_2:12697384-12697403 Msa0238840:CDS 50.0%
GACACTCGCCAGTTCTTTGA+AGG - chr2_2:12697623-12697642 Msa0238840:CDS 50.0%
AGGTTGAGAATTCCAGCTCG+AGG + chr2_2:12697794-12697813 None:intergenic 50.0%
! TTGGTGGCAACTTTGCAGCA+AGG + chr2_2:12697814-12697833 None:intergenic 50.0%
CAGAAACAGCTGGTGCACTT+TGG - chr2_2:12698209-12698228 Msa0238840:intron 50.0%
TGGTTGTGGTGGCTGTGTGA+TGG - chr2_2:12697103-12697122 Msa0238840:CDS 55.0%
! GAGTATTGCGATCCTCGAGC+TGG - chr2_2:12697779-12697798 Msa0238840:intron 55.0%
ACCAGAGAAGAGCTTGGCAG+AGG - chr2_2:12697881-12697900 Msa0238840:intron 55.0%
TCCTCTGCCAAGCTCTTCTC+TGG + chr2_2:12697885-12697904 None:intergenic 55.0%
!! ACTTGGTGAGGGCATCCAGC+AGG + chr2_2:12698621-12698640 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 12695447 12699077 12695447 ID=Msa0238840;Name=Msa0238840
chr2_2 mRNA 12695447 12699077 12695447 ID=Msa0238840-mRNA-1;Parent=Msa0238840;Name=Msa0238840-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|10|0|730
chr2_2 exon 12698721 12699077 12698721 ID=Msa0238840-mRNA-1:exon:5393;Parent=Msa0238840-mRNA-1
chr2_2 exon 12698055 12698187 12698055 ID=Msa0238840-mRNA-1:exon:5392;Parent=Msa0238840-mRNA-1
chr2_2 exon 12697904 12697967 12697904 ID=Msa0238840-mRNA-1:exon:5391;Parent=Msa0238840-mRNA-1
chr2_2 exon 12697031 12697700 12697031 ID=Msa0238840-mRNA-1:exon:5390;Parent=Msa0238840-mRNA-1
chr2_2 exon 12696581 12696910 12696581 ID=Msa0238840-mRNA-1:exon:5389;Parent=Msa0238840-mRNA-1
chr2_2 exon 12696197 12696475 12696197 ID=Msa0238840-mRNA-1:exon:5388;Parent=Msa0238840-mRNA-1
chr2_2 exon 12696040 12696112 12696040 ID=Msa0238840-mRNA-1:exon:5387;Parent=Msa0238840-mRNA-1
chr2_2 exon 12695871 12695956 12695871 ID=Msa0238840-mRNA-1:exon:5386;Parent=Msa0238840-mRNA-1
chr2_2 exon 12695639 12695758 12695639 ID=Msa0238840-mRNA-1:exon:5385;Parent=Msa0238840-mRNA-1
chr2_2 exon 12695447 12695527 12695447 ID=Msa0238840-mRNA-1:exon:5384;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12698721 12699077 12698721 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12698055 12698187 12698055 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12697904 12697967 12697904 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12697031 12697700 12697031 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12696581 12696910 12696581 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12696197 12696475 12696197 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12696040 12696112 12696040 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12695871 12695956 12695871 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12695639 12695758 12695639 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
chr2_2 CDS 12695447 12695527 12695447 ID=Msa0238840-mRNA-1:cds;Parent=Msa0238840-mRNA-1
Gene Sequence

>Msa0238840

ATGAAGATTAAAATTTATATAAAAGGAAACTCAAATCAACAATCTGAGTTTTTAAGGAACTCAAAATCAGTTGAAAGAAAAGTTTCAGCTTCTGCAGCAGAATCGTCACAACAAAATATTGATACAAATCAAAACAAAACATCAAAACGCTCAAGAGATTCGGCAAATTCAAAGAAGAGAAGAGTTGAAAATGGTTGTAAACTTGATATTACCAAATCAAAGAACTATGGTACTACATCAAAACACAAGAAAATAAAACTTGAAGGCAGTAACAATTTTGAAGATGAAGAAGATGAGGAAGTTATATTTGTTTCAATGACAAAGTCAAGAAGCAAAGGAATGTTGGATAATATATTGACGTCTAACAAGAACATCACAGATTGTGAAAAAATTCATCATCACCGATATATGATTAATTTACTACTTCCATCTCTTTGCTTAATTTTTGAAGAGCAATGTCGAGAACAAGAGATTGAAGCCAAAATACAAGGCAAACCATGTTCAGAGATTGAGATACCACAAACTCCATGTCATGATAAGGAGCGTATGTATTGTGATCATTGTGCTACTTCAATTGTTGACCTTTATAGAAGCTGTCCTAAATGTTCCTTTGAAATATGCCTTAGTTGTTGCAAAGAAATACGCAACGGAAGTATCACACCACGCTTTGAAATGAAGTTTCAATACAAAAATAGAGGTGATGAATACATGCATGGTGGTGATCCTCTACCAATAACTTGCGATACAAGTAATTTAGAGGGTCATGTTGAGATATTTACCAAATGGAATGTGAATAGTGATGGAAGTGTTGAATGTGCTCCAAAAGAACTAGGTGGTTGTGGTGGCTGTGTGATGGAGCTGAAACGCATTCTTCCAGATGGGAGGATATATAAATTGGTAACAGAAGCTCGTTGTATGAAGAAACATTTTTGCAAAATTGAAAAACAAAAGAATGTTGAGAAGGAAAGAATCTCAAGTTGCAGCAATTACAATGACATATACCGTCAGATTTCGAGTGACCTTATAGGAAAAAAGCTATTTAAATTCCAAGAGTATTGGAGGAACGGTGAACCTGTTCTAATATCTGACGTTCTCAAACAAGGGACAGGATTGAGTTGGGAGCCAATGGTTACTTGGAGAGCATTGCGTGTAAATTCATCTTCAAGTGTCAGCTCAAATGATAATTCAAATGTACAGGCTATTGATTGCTTGGCTAGTTGTGAGGTAAAAATTGACACTCGCCAGTTCTTTGAAGGTTATAAAGAGGGAAGAAGATATAAAAATTTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCACCTTATGATGAGTTTGAAAATGTCTTGCCGCGCCATTGTGACGAGTTTATCCGTTGTTTGCCATTTCAAGAGTATTGCGATCCTCGAGCTGGAATTCTCAACCTTGCTGCAAAGTTGCCACCAAATGTTATAAGGCCTGACTTAGGTCCAAAAACTTACATTGCTTATGGAACCAGAGAAGAGCTTGGCAGAGGAGATTCTGTTACAAAACTTCATTGTGATATTGCAGACGCGGTCAATATTTTGACTCATATAACTGAGGTGAAATTAACAGATGAACAACTTTATGCTATTAAAAAAATAAAAAGAGCACATAAGGCTCAAGATAGGGAAGAGGGTCTTGTTCAAGATAATGGAGGTCCTTTTGTGCCATCATCTATCACAAAAGATACATCAGAAACAGCTGGTGCACTTTGGGACATATTCCGAAGAGAAGATACTGCAAAGTTAGAAGCATATCTTAGAAAACACTCCAAAGAATTTAGGCATACTTATTGTTCTCCAGTAAAAGAGGTTATTCATCCTATTCATGACCAATGTTTTTATTTGACTTTTGAGCATAAGAAGAAGCTAGAGGAAGAGTTTGGTGTAGTACCTTTGACTTTGGAGCAGAAACTTGGTGAAGCAGTATTTATACCTGCTGGATGCCCTCACCAAGTGAGAAATCTGAAGTCATGCACAAAAGTTGCAGTAGACTTTGTGTCACCAGAAAATGTGGATATATGCATGCTTTTAACTGAAGAGTTTCGTCGACTTCCTAAGAATCACAGGGCAAGAGAAGACAAACTTGAGGTAAAAAAGATGATAATCCATGCTGTTGACCAAGTTGTTAAAGAATTGGAAGCTTTCATTGGATGCTCATCACTCGACTGA
Protein sequence

>Msa0238840

MKIKIYIKGNSNQQSEFLRNSKSVERKVSASAAESSQQNIDTNQNKTSKRSRDSANSKKRRVENGCKLDITKSKNYGTTSKHKKIKLEGSNNFEDEEDEEVIFVSMTKSRSKGMLDNILTSNKNITDCEKIHHHRYMINLLLPSLCLIFEEQCREQEIEAKIQGKPCSEIEIPQTPCHDKERMYCDHCATSIVDLYRSCPKCSFEICLSCCKEIRNGSITPRFEMKFQYKNRGDEYMHGGDPLPITCDTSNLEGHVEIFTKWNVNSDGSVECAPKELGGCGGCVMELKRILPDGRIYKLVTEARCMKKHFCKIEKQKNVEKERISSCSNYNDIYRQISSDLIGKKLFKFQEYWRNGEPVLISDVLKQGTGLSWEPMVTWRALRVNSSSSVSSNDNSNVQAIDCLASCEVKIDTRQFFEGYKEGRRYKNFWPEMLKLKDWPPYDEFENVLPRHCDEFIRCLPFQEYCDPRAGILNLAAKLPPNVIRPDLGPKTYIAYGTREELGRGDSVTKLHCDIADAVNILTHITEVKLTDEQLYAIKKIKRAHKAQDREEGLVQDNGGPFVPSSITKDTSETAGALWDIFRREDTAKLEAYLRKHSKEFRHTYCSPVKEVIHPIHDQCFYLTFEHKKKLEEEFGVVPLTLEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDICMLLTEEFRRLPKNHRAREDKLEVKKMIIHAVDQVVKELEAFIGCSSLD*