AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0241240


Find 368 sgRNAs with CRISPR-Local

Find 841 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr2_2 gene 16695355 16708245 16695355 ID=Msa0241240;Name=Msa0241240
chr2_2 mRNA 16695355 16708245 16695355 ID=Msa0241240-mRNA-1;Parent=Msa0241240;Name=Msa0241240-mRNA-1;_AED=0.15;_eAED=0.15;_QI=226|0.86|0.87|1|0.73|0.70|24|1517|1293
chr2_2 exon 16695355 16696271 16695355 ID=Msa0241240-mRNA-1:exon:6948;Parent=Msa0241240-mRNA-1
chr2_2 exon 16696350 16696508 16696350 ID=Msa0241240-mRNA-1:exon:6947;Parent=Msa0241240-mRNA-1
chr2_2 exon 16697034 16697359 16697034 ID=Msa0241240-mRNA-1:exon:6946;Parent=Msa0241240-mRNA-1
chr2_2 exon 16697415 16697868 16697415 ID=Msa0241240-mRNA-1:exon:6945;Parent=Msa0241240-mRNA-1
chr2_2 exon 16698442 16698717 16698442 ID=Msa0241240-mRNA-1:exon:6944;Parent=Msa0241240-mRNA-1
chr2_2 exon 16700945 16701241 16700945 ID=Msa0241240-mRNA-1:exon:6943;Parent=Msa0241240-mRNA-1
chr2_2 exon 16701406 16701615 16701406 ID=Msa0241240-mRNA-1:exon:6942;Parent=Msa0241240-mRNA-1
chr2_2 exon 16702045 16702238 16702045 ID=Msa0241240-mRNA-1:exon:6941;Parent=Msa0241240-mRNA-1
chr2_2 exon 16702400 16702503 16702400 ID=Msa0241240-mRNA-1:exon:6940;Parent=Msa0241240-mRNA-1
chr2_2 exon 16702621 16703015 16702621 ID=Msa0241240-mRNA-1:exon:6939;Parent=Msa0241240-mRNA-1
chr2_2 exon 16703105 16703376 16703105 ID=Msa0241240-mRNA-1:exon:6938;Parent=Msa0241240-mRNA-1
chr2_2 exon 16703509 16703723 16703509 ID=Msa0241240-mRNA-1:exon:6937;Parent=Msa0241240-mRNA-1
chr2_2 exon 16703879 16704097 16703879 ID=Msa0241240-mRNA-1:exon:6936;Parent=Msa0241240-mRNA-1
chr2_2 exon 16704192 16704352 16704192 ID=Msa0241240-mRNA-1:exon:6935;Parent=Msa0241240-mRNA-1
chr2_2 exon 16704438 16704733 16704438 ID=Msa0241240-mRNA-1:exon:6934;Parent=Msa0241240-mRNA-1
chr2_2 exon 16704829 16704949 16704829 ID=Msa0241240-mRNA-1:exon:6933;Parent=Msa0241240-mRNA-1
chr2_2 exon 16705038 16705166 16705038 ID=Msa0241240-mRNA-1:exon:6932;Parent=Msa0241240-mRNA-1
chr2_2 exon 16705327 16705467 16705327 ID=Msa0241240-mRNA-1:exon:6931;Parent=Msa0241240-mRNA-1
chr2_2 exon 16706161 16706225 16706161 ID=Msa0241240-mRNA-1:exon:6930;Parent=Msa0241240-mRNA-1
chr2_2 exon 16706630 16706701 16706630 ID=Msa0241240-mRNA-1:exon:6929;Parent=Msa0241240-mRNA-1
chr2_2 exon 16707062 16707182 16707062 ID=Msa0241240-mRNA-1:exon:6928;Parent=Msa0241240-mRNA-1
chr2_2 exon 16707303 16707480 16707303 ID=Msa0241240-mRNA-1:exon:6927;Parent=Msa0241240-mRNA-1
chr2_2 exon 16707575 16707668 16707575 ID=Msa0241240-mRNA-1:exon:6926;Parent=Msa0241240-mRNA-1
chr2_2 exon 16708037 16708245 16708037 ID=Msa0241240-mRNA-1:exon:6925;Parent=Msa0241240-mRNA-1
chr2_2 five_prime_UTR 16708037 16708245 16708037 ID=Msa0241240-mRNA-1:five_prime_utr;Parent=Msa0241240-mRNA-1
chr2_2 five_prime_UTR 16707652 16707668 16707652 ID=Msa0241240-mRNA-1:five_prime_utr;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16707575 16707651 16707575 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16707303 16707480 16707303 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16707062 16707182 16707062 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16706630 16706701 16706630 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16706161 16706225 16706161 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16705327 16705467 16705327 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16705038 16705166 16705038 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16704829 16704949 16704829 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16704438 16704733 16704438 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16704192 16704352 16704192 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16703879 16704097 16703879 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16703509 16703723 16703509 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16703105 16703376 16703105 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16702621 16703015 16702621 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16702400 16702503 16702400 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16702045 16702238 16702045 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16701406 16701615 16701406 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16700945 16701241 16700945 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16698442 16698717 16698442 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 CDS 16697530 16697868 16697530 ID=Msa0241240-mRNA-1:cds;Parent=Msa0241240-mRNA-1
chr2_2 three_prime_UTR 16697415 16697529 16697415 ID=Msa0241240-mRNA-1:three_prime_utr;Parent=Msa0241240-mRNA-1
chr2_2 three_prime_UTR 16697034 16697359 16697034 ID=Msa0241240-mRNA-1:three_prime_utr;Parent=Msa0241240-mRNA-1
chr2_2 three_prime_UTR 16696350 16696508 16696350 ID=Msa0241240-mRNA-1:three_prime_utr;Parent=Msa0241240-mRNA-1
chr2_2 three_prime_UTR 16695355 16696271 16695355 ID=Msa0241240-mRNA-1:three_prime_utr;Parent=Msa0241240-mRNA-1
Gene Sequence

>Msa0241240

ATGGAGGAAGCTCTGATGGAAATGGATGACTATGATGAGCAGCAGATCAAGCCAAATGCACTTCCATTTGCTAGAAGCTATCAGCTTGAAGCATTGGAAAAAGCGATCCGTGAAAATACCATAGTGTACTTGGAGACTGGTTCTGGAAAGACTTTGATAGCCATCATGCTTCTTCGAAGCTACGCTTATCACCTCCGAAAGCCTTCTCCTTACATTGCTGTGTTTTTGGTTCCCAAAGTTGTATTAGTTTCTCAACAAGCTAAAGCTTTGAGAAATCACACTGATTTGAAAATTGGAACGTATTGGGGAGATATGGGTGTTGATTACTGGGATGGAGATGTATGGAAAGGAGAAATAGAGAAACATGAGGTGAGGGGTGCTTGTGATGACTCCTGCTATACTGCTTTCTTGCTTGAGGCACAGCTTTATCAAACTGTCAATGATAAAGCTGCGAATTCTGAATCAACCTTGTCCAAATCTATTCGGGAACTAATGACTCTAATGCATTCAAAGGTTTATACATGCGTATGCGATGCTGTCATCTCACAGTTCATACCAACATCTACTCCAAAATTCCGGTTTTACAGGGACAATGGGATTTCATATACGCTATTCGAAGAATTAGCCAAAAGGCTTAACGAATTAAAAAAACAGCACGAGCGTTACATCACAAGTTCAGATTTGACTAAATCAGCTGTCCAATCTGCTTACAAAAAAATTGCAAGGATTTTTGATGCCTCAATTTTTTGCTTAGAAGAGCTTGGTATTTGGTTGGCTTTGAAGGCTGCGGAGTCCTTATCTTCCATTGAAATTGAAACATTCATATGGGGTATCTCTGGGGATCAGATTGTTAAAAAATTTAGTTCAACTACTATGATGACACTGCAAAGTTGCATACCATCTGATCCTCGGTGGACTATTGGTGACAATATGAAATTCAATTTGGAAATGGGGCTATTGACCTCCAAAGTATGCTGTCTTATTGAATGTCTACTTGAGTACAAGGGTTTAACTGAAATGAGATGCATAGTTTTTGTGGAAAGGGTCATTGCAGCTATTGTCCTTGAGGTTCTATTGAACGCTTTGCTTCCAAAATACAATAGCTGGAGGGCTAAATACATTGCAGGAACCGGTAGTAAACTGCAAAACCAAACTAGAAAAATTCAAAATGAGATTGTGGAAGAATTTCGTAAGGGATTGGTCAACATCATTGTTGCAACATCAATTCTTGAAGAGGGTTTAGATGTCCAAAGTTGCAATCTGGTTATTAGATTTGACCCATCTCCCACGGTGTGCAGTTTTGTACAGTCCCGAGGCCGTGCCAGAATGCGAAATTCAGATTACATATTGATGGTAAAAAGCGGCGATGCAGTTACACGTTCTCGATTAGAGAAATACCTTGATGGTGGGCAAATGATGAGGAAGGAGTCCTTGCGTCATTCTTCCCTTCCATGTGAGAGTCTTGAAAGTGATCGATTTAACGAGCAAGCTTACCGAGTTGCAAGCACTGAAGCTGTTGTTAATCTTAGTTCCAGCATTACTTTGATATACTTATATTGCTCCCGTCTCCCTTCAGATGGGTACTTTAAACCGACTCCGATGTGGGACAAACAAAAAGGAATATTATATCTTCCTAAGAGTTGTCCTATACAGCCTATTCATGTACAAGGTGATACAAAGTTCTTAAAGAATATTGCATGCCTTGAAGCATGCAAACAACTTCATAAGATTGGAGCGTTGACAGATAATCTTGTTCCTTCTATTGTCGTTGAAGAAGCAGAGGTGGAGGAATTTGGGAAAGAACCATATTCCGAAGAACAACCAAGTTATGTTCCATTTGAATTGGTGAATCAAGTGACGAACAGTAGTAACACAATCTACTATTGTTATTTAATAGAGCTAAAACAAAATTTTAGCTATGACATCACTGTGCAAGACATTTTTCTCGCAACTAGAGTCAAGCTTGATCCAGAAATTGGATGCATGCAATTTGACATGTGTTTCGACAGAGGTAGTCTGGCCGTAAACTTGAGATACATAGGAAACATTAATCTCTCACCAGATCAGGTTCTTCTGTGTAAAAGATTCCAAGTTAGTATCCTTGGAATTCTTATGAATCGTAAAATGGATAAAGAAAATCTTTCAGAAAAATTCTCTCTGGAAGATGATCTTGAGATAGATTATCTCCTGCTGCCGTCTATTGCTATAGAGGAAACACCGTCTGTTGATTGGTTAACAATCAGTTCCATACATCCATCTACAATTCAGTGTCGGTATCATGGGGCCAAGATATTGACTGAGAAGGGTTTCGTTTGTGGCTGCATATTGCGAAATGCTTTGATTTGCACTCCTCATAATGGTCGTACTTACATCACCACTGATATGATGGAATTGGACGGAAACTCACCTCTGAAAGTAGGGGATGGTGAAGTTACTACATATAAGAAGTACTTTGGACAGAAGCATGGCATTCAATTGCGTTTTGAACATCAACGCCTACTTAAGGCAAGACACGTTTTTCCAGTAAAAAATTATTGTCATGGATATAAACAAGCGAAGGACAGAGATGTGAGCAAGACCTTTGTTGAATTACCTCCTGAACTCTGCTCTATAATCATGTCACCAGTACCACTTAGCACGCTTTATACATTTTCATTTATTCCATCGATCATGCATAGACTTGAGTCGTTGCTTGGTGCTTATAACTTTAAAAAGATGCATTTGGATTATTGCCCACAAAACAAGATTCAAACATTCAAGGTCTTGGAAGCAATGACCACAAAGTCATGCAAGGAGACCTTTCATTATGAGTCACTAGAGACACTTGGAGATTCTTTTTTAAAATATGCTGTTAGCCAACAGCTCTTTAATATGTATCAAAATCAGCACGAGGGTCTTCTTAGTGTGAAGAGGGAGAAGATCATTTGTAATGCTGCCCTCTCTAAGTTAGGTTGCAATTTTAGACTTCCGGGCTTCATACGGAATGACCCTTTTGATCCGAAGACCTGGATCATTCCTGGAGCTAAATCAGGAAGTTTTAAATTAGAAGAGACAGTTTTCAATGGGAGAAAAATATATACTCGCGGAGATAGAAAATTGAAACGGAAAGTTGTTGCTGATGTTGTCGAAGCACTAATTGGTGCATTCCTTAGCGCTGGTGGCGAGATGGCTGCATTGTTGTTTATGGATTGGATTGGGATCAAAGTGAATTTTAATATCAATCCATATGAGAGGCAATTCATTGCTTGTCCCGACAATCTAGTTAATCGACTTGAATACTTGGGAGACTCGGTGCTGGACTATCTCATTACCATGCATTTGTATCGAGTATATCCTGGCATGTCACCTGGGCAGTTAACAGACATGAGGTCTGCATCGGTGAATAATGACTGTTATGCAATGTCTGCCATTAAGGTTCAATTGCATAAGCATGTCCTTCATGCCTCTCAAGAGCTACATAAACATATTGAAGCTACGCTTGATAAATTTGACGGTCAGTCTTCATCAAGTTTTGGATGGGAATCCGATGCTACATTCCCCAAGGTACTTGGAGACATCATAGAGTCTCTAGCTGGTGCTATATTTGTTGATTCAGGATACGATAAGGAGGCTGTGTGGAAAAGCATAAGGCCTCTTTTGGAGCCCCTTGTGACACCTGATACATTAACGATCCATCCGATTAGAGAATTAAATGAACTGTGCCAAAAAATGAATTATACTAAGGAGACGACCTTGTCCAGAAACGACGGCGTTACGAGCTGTAAAATTGAGGTAATTGCGGATGGGGTAATTCATGAGTTCGAGTACAAAGGTTCTACCGACAAGAAAACTGCCACAAGACTAGCCTGCAAGGGAGTTTTGCATTCCTTGCAATTGAAGTAA

Protein sequence

>Msa0241240

MEEALMEMDDYDEQQIKPNALPFARSYQLEALEKAIRENTIVYLETGSGKTLIAIMLLRSYAYHLRKPSPYIAVFLVPKVVLVSQQAKALRNHTDLKIGTYWGDMGVDYWDGDVWKGEIEKHEVRGACDDSCYTAFLLEAQLYQTVNDKAANSESTLSKSIRELMTLMHSKVYTCVCDAVISQFIPTSTPKFRFYRDNGISYTLFEELAKRLNELKKQHERYITSSDLTKSAVQSAYKKIARIFDASIFCLEELGIWLALKAAESLSSIEIETFIWGISGDQIVKKFSSTTMMTLQSCIPSDPRWTIGDNMKFNLEMGLLTSKVCCLIECLLEYKGLTEMRCIVFVERVIAAIVLEVLLNALLPKYNSWRAKYIAGTGSKLQNQTRKIQNEIVEEFRKGLVNIIVATSILEEGLDVQSCNLVIRFDPSPTVCSFVQSRGRARMRNSDYILMVKSGDAVTRSRLEKYLDGGQMMRKESLRHSSLPCESLESDRFNEQAYRVASTEAVVNLSSSITLIYLYCSRLPSDGYFKPTPMWDKQKGILYLPKSCPIQPIHVQGDTKFLKNIACLEACKQLHKIGALTDNLVPSIVVEEAEVEEFGKEPYSEEQPSYVPFELVNQVTNSSNTIYYCYLIELKQNFSYDITVQDIFLATRVKLDPEIGCMQFDMCFDRGSLAVNLRYIGNINLSPDQVLLCKRFQVSILGILMNRKMDKENLSEKFSLEDDLEIDYLLLPSIAIEETPSVDWLTISSIHPSTIQCRYHGAKILTEKGFVCGCILRNALICTPHNGRTYITTDMMELDGNSPLKVGDGEVTTYKKYFGQKHGIQLRFEHQRLLKARHVFPVKNYCHGYKQAKDRDVSKTFVELPPELCSIIMSPVPLSTLYTFSFIPSIMHRLESLLGAYNFKKMHLDYCPQNKIQTFKVLEAMTTKSCKETFHYESLETLGDSFLKYAVSQQLFNMYQNQHEGLLSVKREKIICNAALSKLGCNFRLPGFIRNDPFDPKTWIIPGAKSGSFKLEETVFNGRKIYTRGDRKLKRKVVADVVEALIGAFLSAGGEMAALLFMDWIGIKVNFNINPYERQFIACPDNLVNRLEYLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDCYAMSAIKVQLHKHVLHASQELHKHIEATLDKFDGQSSSSFGWESDATFPKVLGDIIESLAGAIFVDSGYDKEAVWKSIRPLLEPLVTPDTLTIHPIRELNELCQKMNYTKETTLSRNDGVTSCKIEVIADGVIHEFEYKGSTDKKTATRLACKGVLHSLQLK*