Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1284990 | sp|Q3EBC8|DCL2_ARATH | 51.318 | 1062 | 473 | 15 | 1 | 1032 | 3 | 1050 | 0.0 | 1040 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1284990 | G7IKX1 | 93.397 | 1045 | 62 | 1 | 1 | 1038 | 1 | 1045 | 0.0 | 1996 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0051050 | Msa1284990 | 0.831739 | 1.407155e-55 | -8.615850e-47 |
Msa0089870 | Msa1284990 | 0.842427 | 2.603538e-58 | -8.615850e-47 |
Msa0101240 | Msa1284990 | 0.810055 | 1.394359e-50 | -8.615850e-47 |
Msa0703790 | Msa1284990 | 0.829553 | 4.827669e-55 | -8.615850e-47 |
Msa0713910 | Msa1284990 | 0.832735 | 7.976813e-56 | -8.615850e-47 |
Msa0756170 | Msa1284990 | 0.826647 | 2.418563e-54 | -8.615850e-47 |
Msa0136260 | Msa1284990 | 0.844528 | 7.151860e-59 | -8.615850e-47 |
Msa0198480 | Msa1284990 | 0.825134 | 5.530120e-54 | -8.615850e-47 |
Msa0198560 | Msa1284990 | 0.819934 | 8.946899e-53 | -8.615850e-47 |
Msa1243920 | Msa1284990 | 0.911003 | 9.936539e-83 | -8.615850e-47 |
Msa1266490 | Msa1284990 | 0.829442 | 5.136582e-55 | -8.615850e-47 |
Msa1268530 | Msa1284990 | 0.865474 | 5.754584e-65 | -8.615850e-47 |
Msa1284990 | Msa1325060 | 0.876292 | 1.567601e-68 | -8.615850e-47 |
Msa1284990 | Msa1334490 | 0.808473 | 3.044083e-50 | -8.615850e-47 |
Msa1284990 | Msa1360420 | 0.810967 | 8.858098e-51 | -8.615850e-47 |
Msa1284990 | Msa1382680 | 0.849029 | 4.202830e-60 | -8.615850e-47 |
Msa1284990 | Msa1407740 | 0.812764 | 3.597475e-51 | -8.615850e-47 |
Msa1284990 | Msa1409490 | 0.819247 | 1.283549e-52 | -8.615850e-47 |
Msa1284990 | Msa1417050 | 0.842888 | 1.964000e-58 | -8.615850e-47 |
Msa1284990 | Msa1435870 | 0.842705 | 2.196288e-58 | -8.615850e-47 |
Msa0408340 | Msa1284990 | 0.813403 | 2.605342e-51 | -8.615850e-47 |
Msa0464440 | Msa1284990 | 0.829074 | 6.308358e-55 | -8.615850e-47 |
Msa1078550 | Msa1284990 | 0.817451 | 3.276224e-52 | -8.615850e-47 |
Msa0241240 | Msa1284990 | 0.828735 | 7.619749e-55 | -8.615850e-47 |
Msa0244890 | Msa1284990 | 0.802531 | 5.367746e-49 | -8.615850e-47 |
Msa0283490 | Msa1284990 | 0.819296 | 1.251096e-52 | -8.615850e-47 |
Msa0341500 | Msa1284990 | 0.816136 | 6.461578e-52 | -8.615850e-47 |
Msa1155900 | Msa1284990 | 0.817847 | 2.666294e-52 | -8.615850e-47 |
Msa1169460 | Msa1284990 | 0.817235 | 3.663106e-52 | -8.615850e-47 |
Msa1189820 | Msa1284990 | 0.944347 | 2.303499e-103 | -8.615850e-47 |
Msa1219900 | Msa1284990 | 0.800492 | 1.405192e-48 | -8.615850e-47 |
Msa0567390 | Msa1284990 | 0.807095 | 5.974614e-50 | -8.615850e-47 |
Msa0567460 | Msa1284990 | 0.802858 | 4.594390e-49 | -8.615850e-47 |
Msa0896450 | Msa1284990 | 0.834732 | 2.527698e-56 | -8.615850e-47 |
Msa0903170 | Msa1284990 | 0.839161 | 1.869426e-57 | -8.615850e-47 |
Msa0961640 | Msa1284990 | 0.817149 | 3.829383e-52 | -8.615850e-47 |
Msa0961650 | Msa1284990 | 0.806330 | 8.669732e-50 | -8.615850e-47 |
Msa0972480 | Msa1284990 | 0.833518 | 5.092662e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1284990 | MtrunA17_Chr2g0292651 | 93.397 | 1045 | 62 | 1 | 1 | 1038 | 1 | 1045 | 0.0 | 1996 |
Msa1284990 | MtrunA17_Chr8g0368761 | 81.220 | 1049 | 186 | 2 | 1 | 1038 | 1 | 1049 | 0.0 | 1764 |
Msa1284990 | MtrunA17_Chr1g0179081 | 78.302 | 1060 | 186 | 3 | 23 | 1038 | 13 | 1072 | 0.0 | 1688 |
Msa1284990 | MtrunA17_Chr4g0065391 | 33.425 | 1086 | 631 | 30 | 10 | 1032 | 28 | 1084 | 1.80e-149 | 485 |
Msa1284990 | MtrunA17_Chr7g0276451 | 29.857 | 911 | 491 | 28 | 6 | 790 | 198 | 1086 | 2.16e-97 | 340 |
Msa1284990 | MtrunA17_Chr7g0276451 | 32.618 | 233 | 136 | 7 | 820 | 1038 | 1192 | 1417 | 1.40e-26 | 118 |
Msa1284990 | MtrunA17_Chr3g0136471 | 30.788 | 825 | 477 | 20 | 13 | 772 | 44 | 839 | 1.50e-95 | 334 |
Msa1284990 | MtrunA17_Chr3g0136471 | 31.441 | 229 | 141 | 3 | 825 | 1038 | 951 | 1178 | 1.67e-21 | 101 |
Msa1284990 | MtrunA17_Chr1g0180831 | 84.127 | 63 | 10 | 0 | 836 | 898 | 1 | 63 | 1.66e-32 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1284990 | AT3G03300.3 | 51.318 | 1062 | 473 | 15 | 1 | 1032 | 3 | 1050 | 0.0 | 1040 |
Msa1284990 | AT3G03300.1 | 51.318 | 1062 | 473 | 15 | 1 | 1032 | 3 | 1050 | 0.0 | 1040 |
Msa1284990 | AT3G03300.2 | 49.746 | 983 | 452 | 14 | 80 | 1032 | 66 | 1036 | 0.0 | 938 |
Msa1284990 | AT3G03300.4 | 47.759 | 848 | 402 | 14 | 215 | 1032 | 1 | 837 | 0.0 | 760 |
Msa1284990 | AT5G20320.1 | 31.099 | 1074 | 652 | 28 | 24 | 1032 | 124 | 1174 | 1.85e-130 | 434 |
Msa1284990 | AT5G20320.2 | 30.148 | 1078 | 643 | 30 | 24 | 1032 | 124 | 1160 | 1.82e-122 | 412 |
Msa1284990 | AT5G20320.3 | 30.175 | 971 | 591 | 27 | 127 | 1032 | 1 | 949 | 6.38e-105 | 360 |
Msa1284990 | AT1G01040.1 | 30.440 | 887 | 480 | 26 | 24 | 794 | 249 | 1114 | 5.93e-101 | 350 |
Msa1284990 | AT1G01040.1 | 33.188 | 229 | 136 | 7 | 802 | 1020 | 1197 | 1418 | 1.26e-24 | 112 |
Msa1284990 | AT1G01040.2 | 30.405 | 888 | 480 | 26 | 24 | 794 | 249 | 1115 | 8.87e-101 | 350 |
Msa1284990 | AT1G01040.2 | 33.188 | 229 | 136 | 7 | 802 | 1020 | 1198 | 1419 | 1.26e-24 | 112 |
Msa1284990 | AT3G43920.2 | 30.843 | 522 | 314 | 12 | 26 | 525 | 46 | 542 | 3.90e-56 | 213 |
Msa1284990 | AT3G43920.2 | 32.911 | 237 | 142 | 7 | 816 | 1038 | 850 | 1083 | 1.06e-21 | 102 |
Msa1284990 | AT3G43920.3 | 31.094 | 521 | 304 | 12 | 26 | 525 | 46 | 532 | 2.62e-55 | 211 |
Msa1284990 | AT3G43920.3 | 32.911 | 237 | 142 | 7 | 816 | 1038 | 840 | 1073 | 1.01e-21 | 102 |
Msa1284990 | AT3G43920.5 | 31.094 | 521 | 304 | 12 | 26 | 525 | 46 | 532 | 3.05e-55 | 210 |
Msa1284990 | AT3G43920.5 | 32.911 | 237 | 142 | 7 | 816 | 1038 | 840 | 1073 | 1.02e-21 | 102 |
Msa1284990 | AT3G43920.4 | 30.784 | 523 | 307 | 12 | 24 | 525 | 43 | 531 | 6.14e-55 | 209 |
Msa1284990 | AT3G43920.4 | 32.911 | 237 | 142 | 7 | 816 | 1038 | 839 | 1072 | 1.10e-21 | 102 |
Msa1284990 | AT3G43920.1 | 30.000 | 510 | 285 | 17 | 26 | 525 | 46 | 493 | 6.63e-42 | 168 |
Msa1284990 | AT3G43920.1 | 32.911 | 237 | 142 | 7 | 816 | 1038 | 801 | 1034 | 1.19e-21 | 102 |
Msa1284990 | AT3G43920.6 | 32.911 | 237 | 142 | 7 | 816 | 1038 | 622 | 855 | 1.13e-21 | 102 |
Msa1284990 | AT3G43920.6 | 28.287 | 251 | 158 | 6 | 285 | 525 | 76 | 314 | 1.30e-16 | 85.9 |
Msa1284990 | AT1G35530.2 | 30.000 | 170 | 111 | 5 | 358 | 522 | 436 | 602 | 1.75e-11 | 69.3 |
Msa1284990 | AT1G35530.4 | 30.488 | 164 | 106 | 5 | 358 | 516 | 436 | 596 | 2.58e-11 | 68.6 |
Msa1284990 | AT1G35530.3 | 30.488 | 164 | 106 | 5 | 358 | 516 | 438 | 598 | 2.58e-11 | 68.6 |
Msa1284990 | AT1G35530.5 | 30.488 | 164 | 106 | 5 | 358 | 516 | 436 | 596 | 2.70e-11 | 68.6 |
Find 224 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTGTAAAACAGGAATTT+TGG | 0.069186 | 8_3:+28402631 | None:intergenic |
TAATAACCAGATTGCAATTT+TGG | 0.076054 | 8_3:+28401546 | None:intergenic |
GGTCTCCTTGCATGACTTTC+TGG | 0.095718 | 8_3:+28398926 | None:intergenic |
AATCACACTGATTTGAAAAT+TGG | 0.162025 | 8_3:-28404819 | Msa1284990:CDS |
TTTCTTCGTTCTTTCTTAAA+TGG | 0.181792 | 8_3:-28405960 | Msa1284990:five_prime_UTR |
CTTGGTTGTTCTTCGGAATA+TGG | 0.189239 | 8_3:+28400614 | None:intergenic |
TTGAAATTGAAACATTCTTA+TGG | 0.207784 | 8_3:-28402157 | Msa1284990:CDS |
TGACAATATGAATTCCAATT+TGG | 0.214261 | 8_3:-28401955 | Msa1284990:CDS |
TTGCCTTTCTTCTTCCTCTA+AGG | 0.246064 | 8_3:-28405903 | Msa1284990:five_prime_UTR |
CAATAGCCCCATTTCCAAAT+TGG | 0.253709 | 8_3:+28401941 | None:intergenic |
CCTCTGTCAAAACACATTTC+TGG | 0.261141 | 8_3:+28400449 | None:intergenic |
TATCAAACTGTCAATGATAA+AGG | 0.267148 | 8_3:-28403666 | Msa1284990:CDS |
GAAGCAGAGGTGGAGGAATT+TGG | 0.271988 | 8_3:-28400771 | Msa1284990:intron |
CTAGCAAATGGAAGTGTATT+AGG | 0.280335 | 8_3:+28405299 | None:intergenic |
GTAATCTGAATTTCGCATTC+TGG | 0.284308 | 8_3:+28401472 | None:intergenic |
GTCTATAAAGATACACTCTT+AGG | 0.289342 | 8_3:-28405833 | Msa1284990:five_prime_UTR |
CATTAGTTTCCGAATAGATT+TGG | 0.291574 | 8_3:+28403216 | None:intergenic |
TTTGGTCCCCAAAGTTGTTT+TGG | 0.293413 | 8_3:-28405004 | Msa1284990:CDS |
TGGTATTTGGTTGGCTTTGA+AGG | 0.305816 | 8_3:-28402277 | Msa1284990:intron |
TCCGATGTATCTCAAGTTTA+CGG | 0.311909 | 8_3:+28400418 | None:intergenic |
TATGAATTCCAATTTGGAAA+TGG | 0.313349 | 8_3:-28401949 | Msa1284990:CDS |
GCTTAGAAGAGCTTGGTATT+TGG | 0.314684 | 8_3:-28402290 | Msa1284990:CDS |
TGAGAAACCAAAACAACTTT+GGG | 0.316872 | 8_3:+28404997 | None:intergenic |
TTCGCATTCTGGCACGGCCT+CGG | 0.319985 | 8_3:+28401483 | None:intergenic |
ATGAATTCCAATTTGGAAAT+GGG | 0.325111 | 8_3:-28401948 | Msa1284990:CDS |
TTTGAAAATTGGAATGTATT+GGG | 0.326896 | 8_3:-28404808 | Msa1284990:CDS |
TGAAATTGAAACATTCTTAT+GGG | 0.333900 | 8_3:-28402156 | Msa1284990:CDS |
ACATTCTTATGGGGTATCTC+TGG | 0.347322 | 8_3:-28402146 | Msa1284990:CDS |
GTATACCTTTCGACTTGATT+GGG | 0.354734 | 8_3:+28403374 | None:intergenic |
GCCCTCCAGCTATTGTATTT+CGG | 0.355075 | 8_3:+28401789 | None:intergenic |
TGTATACCTTTCGACTTGAT+TGG | 0.364543 | 8_3:+28403373 | None:intergenic |
TCAGATCCTCGGTGGACTAT+TGG | 0.364761 | 8_3:-28401978 | Msa1284990:intron |
TCTAAAATCGCAGCCTAACT+TGG | 0.369218 | 8_3:+28398761 | None:intergenic |
ATTTGAAAATTGGAATGTAT+TGG | 0.370029 | 8_3:-28404809 | Msa1284990:CDS |
GTGTACTTGGAGACTGGTTC+TGG | 0.370361 | 8_3:-28405105 | Msa1284990:CDS |
TTCAATTTCAATGGAAGATA+AGG | 0.371258 | 8_3:+28402169 | None:intergenic |
CCGATGTGGGACAAACAAAA+AGG | 0.372488 | 8_3:-28400948 | Msa1284990:CDS |
ACAGTCATTATACAAGCATA+TGG | 0.373279 | 8_3:+28403602 | None:intergenic |
CACCACTGATATGATGGAAT+TGG | 0.373891 | 8_3:-28399977 | Msa1284990:CDS |
ATACACTTCCATTTGCTAGA+AGG | 0.375202 | 8_3:-28405295 | Msa1284990:intron |
TCCCATTGTCCCTGTAAAAC+AGG | 0.377404 | 8_3:+28402623 | None:intergenic |
GGCTATTGACCTCCAAAGTA+TGG | 0.378123 | 8_3:-28401926 | Msa1284990:CDS |
AAAGAAAGAGGGTTCCTTAG+AGG | 0.378366 | 8_3:+28405889 | None:intergenic |
TTGAGAAACCAAAACAACTT+TGG | 0.379051 | 8_3:+28404996 | None:intergenic |
AAGAATAACATAAGAAAGAG+AGG | 0.384270 | 8_3:+28398718 | None:intergenic |
TCGCATTCTGGCACGGCCTC+GGG | 0.385187 | 8_3:+28401484 | None:intergenic |
TAAGAATGTTTCAATTTCAA+TGG | 0.389049 | 8_3:+28402160 | None:intergenic |
TGGAGGGCTAAATTCATTGC+AGG | 0.392079 | 8_3:-28401774 | Msa1284990:CDS |
GCTTCTTCAACGACAATAGA+AGG | 0.393670 | 8_3:+28400789 | None:intergenic |
AAGTTATGTTCCATTTGAAT+TGG | 0.393779 | 8_3:-28400594 | Msa1284990:CDS |
AAATTCAGATTACATATTGA+TGG | 0.393931 | 8_3:-28401462 | Msa1284990:CDS |
CCCATTTCATTGCTTTCAAA+AGG | 0.397264 | 8_3:-28405760 | Msa1284990:intron |
CCGTATCTGGGTGGTGGTGG+TGG | 0.397604 | 8_3:-28405795 | Msa1284990:five_prime_UTR |
TGCAAACAGCTTCATAAGAT+TGG | 0.398443 | 8_3:-28400834 | Msa1284990:CDS |
TGGAATGTATTGGGGAGATA+TGG | 0.400097 | 8_3:-28404799 | Msa1284990:CDS |
CGACCTTGTCCAAATCTATT+CGG | 0.401460 | 8_3:-28403225 | Msa1284990:CDS |
AGATTCCAAGTTAGTATCCT+TGG | 0.402694 | 8_3:-28400267 | Msa1284990:CDS |
GAAGCTGTTTGCATGCTTCA+AGG | 0.405962 | 8_3:+28400844 | None:intergenic |
TTGATTTGTACTCCTCATAA+TGG | 0.410025 | 8_3:-28400012 | Msa1284990:CDS |
AACATAACTTGGTTGTTCTT+CGG | 0.412365 | 8_3:+28400607 | None:intergenic |
AGATGTCCAAAATTGCAATC+TGG | 0.412761 | 8_3:-28401552 | Msa1284990:CDS |
TCCTAAGAGTTGTCCTATAC+AGG | 0.414558 | 8_3:-28400913 | Msa1284990:CDS |
TTCAATAAGACACCATACTT+TGG | 0.414779 | 8_3:+28401914 | None:intergenic |
AGATGTATGGAAAGGAGAAA+TGG | 0.416591 | 8_3:-28404757 | Msa1284990:CDS |
CAATGTAAGGAGAAGGCTTT+CGG | 0.416611 | 8_3:+28405034 | None:intergenic |
CATTAATCTCTCACCGGATC+AGG | 0.418592 | 8_3:-28400393 | Msa1284990:intron |
ACAATTCAGTGTCGGTATCA+TGG | 0.421959 | 8_3:-28400090 | Msa1284990:CDS |
AGGAAACACCATCTGTTGAT+TGG | 0.426337 | 8_3:-28400140 | Msa1284990:CDS |
AAAACTAACCTTCTAGCAAA+TGG | 0.426880 | 8_3:+28405287 | None:intergenic |
GCCTGTATAGGACAACTCTT+AGG | 0.430449 | 8_3:+28400912 | None:intergenic |
TGAACATCAACGCCTACTTA+AGG | 0.430710 | 8_3:-28399733 | Msa1284990:CDS |
TATCATCATCAATTGAGATC+TGG | 0.431451 | 8_3:-28403436 | Msa1284990:CDS |
GCTAAATTCATTGCAGGAAC+CGG | 0.433754 | 8_3:-28401768 | Msa1284990:CDS |
CAATTCAGTGTCGGTATCAT+GGG | 0.434987 | 8_3:-28400089 | Msa1284990:CDS |
TGCTTCCGAAATACAATAGC+TGG | 0.436869 | 8_3:-28401794 | Msa1284990:CDS |
GAGGGAAGCTCTGATGGAAA+TGG | 0.436893 | 8_3:-28405348 | Msa1284990:CDS |
TCTATAAAGATACACTCTTA+GGG | 0.442179 | 8_3:-28405832 | Msa1284990:five_prime_UTR |
CGATTAGAGAAATACCTTGA+TGG | 0.442874 | 8_3:-28401316 | Msa1284990:CDS |
AATTCAAATGGAACATAACT+TGG | 0.443042 | 8_3:+28400596 | None:intergenic |
TGCTCCCGTCTCCCTTCAGA+TGG | 0.445178 | 8_3:-28401142 | Msa1284990:CDS |
TTTCTTATTCATCCGTATCT+GGG | 0.449178 | 8_3:-28405807 | Msa1284990:five_prime_UTR |
GACTATGAGGGAAGCTCTGA+TGG | 0.451471 | 8_3:-28405354 | Msa1284990:exon |
TATCTGGGTGGTGGTGGTGG+TGG | 0.451951 | 8_3:-28405792 | Msa1284990:five_prime_UTR |
TTGAATGTCTACTTGAGTAC+AGG | 0.460281 | 8_3:-28401896 | Msa1284990:CDS |
TAAGTATATCAAAGTAATGC+TGG | 0.463709 | 8_3:+28401168 | None:intergenic |
ACCCTTCTCAGTCAATATCT+TGG | 0.465525 | 8_3:+28400065 | None:intergenic |
TTACATCACCACTGATATGA+TGG | 0.466262 | 8_3:-28399983 | Msa1284990:CDS |
CTGAATTGTAGACGGATGTA+TGG | 0.467881 | 8_3:+28400104 | None:intergenic |
TAGAGAAAACTAAAAGAAAG+AGG | 0.467913 | 8_3:+28405877 | None:intergenic |
AGAAGAGCTTGGTATTTGGT+TGG | 0.469495 | 8_3:-28402286 | Msa1284990:CDS |
TGTACATGAATAGCCTGTAT+AGG | 0.470058 | 8_3:+28400900 | None:intergenic |
GGAAGAATTTCGTAAGGGAT+TGG | 0.473189 | 8_3:-28401700 | Msa1284990:intron |
AATTCTTCTGAATCGTAAAA+CGG | 0.474887 | 8_3:-28400244 | Msa1284990:CDS |
TGCAACATCAATTCTTGAAG+AGG | 0.475195 | 8_3:-28401579 | Msa1284990:CDS |
GAAACTCACCTCTGCAAGTA+GGG | 0.475419 | 8_3:-28399951 | Msa1284990:CDS |
ATGCGATTCACCAATTCAAA+TGG | 0.475540 | 8_3:+28400584 | None:intergenic |
TGAAAATACCATAGTGTACT+TGG | 0.479294 | 8_3:-28405118 | Msa1284990:CDS |
CATTCTTATGGGGTATCTCT+GGG | 0.480570 | 8_3:-28402145 | Msa1284990:CDS |
ACCAGTCTCCAAGTACACTA+TGG | 0.482931 | 8_3:+28405110 | None:intergenic |
TAGCTATCAGCTTGAAGCAT+TGG | 0.483096 | 8_3:-28405154 | Msa1284990:CDS |
ACTACGTACAAGAAGTACTT+TGG | 0.486934 | 8_3:-28399916 | Msa1284990:CDS |
AACTGCACACTGTGGGAGAT+GGG | 0.487613 | 8_3:+28401516 | None:intergenic |
GCTGCCGTCTATTGCTATAG+AGG | 0.492865 | 8_3:-28400160 | Msa1284990:CDS |
ATGATTATAGAGCAGAGTTC+AGG | 0.494590 | 8_3:+28399460 | None:intergenic |
GCTTAACGAGTTAAAACAAC+AGG | 0.500365 | 8_3:-28402566 | Msa1284990:intron |
CTGAATTTCGCATTCTGGCA+CGG | 0.505315 | 8_3:+28401477 | None:intergenic |
CATTGCAGCTATTGTCCTTG+AGG | 0.505983 | 8_3:-28401832 | Msa1284990:CDS |
CTGGTATCACTGAGCTTCCT+CGG | 0.506338 | 8_3:-28403417 | Msa1284990:CDS |
TTGAAAATTGGAATGTATTG+GGG | 0.510870 | 8_3:-28404807 | Msa1284990:CDS |
ATTACATATTGATGGTAGAA+AGG | 0.513075 | 8_3:-28401454 | Msa1284990:intron |
ACGACTGGGATAAAGATGTA+TGG | 0.513336 | 8_3:-28404770 | Msa1284990:CDS |
CATAGACTTGAGTCGTTGCT+TGG | 0.515033 | 8_3:-28399382 | Msa1284990:CDS |
TGAAAAGATAGCTTCATAAG+AGG | 0.515539 | 8_3:+28398676 | None:intergenic |
TGTTTGTCCCACATCGGAGT+CGG | 0.518863 | 8_3:+28400954 | None:intergenic |
GAGAGGGAAAGAAAGAATAC+CGG | 0.520201 | 8_3:+28398735 | None:intergenic |
CTATAGCAATAGACGGCAGC+AGG | 0.520948 | 8_3:+28400163 | None:intergenic |
AAACTGCACACTGTGGGAGA+TGG | 0.521049 | 8_3:+28401515 | None:intergenic |
CATCCGTATCTGGGTGGTGG+TGG | 0.522088 | 8_3:-28405798 | Msa1284990:five_prime_UTR |
GCCAAGATATTGACTGAGAA+GGG | 0.524045 | 8_3:-28400066 | Msa1284990:CDS |
AATGACTCTAATGCATTCAA+AGG | 0.524255 | 8_3:-28403197 | Msa1284990:intron |
AATGCTGCGCTCTCCAAGTT+AGG | 0.528641 | 8_3:-28398774 | Msa1284990:CDS |
ATATACTGCTTCGTTGCTTG+AGG | 0.529777 | 8_3:-28403697 | Msa1284990:CDS |
GCAACATCAATTCTTGAAGA+GGG | 0.530195 | 8_3:-28401578 | Msa1284990:CDS |
GATACATATTAAAGAGCTGT+CGG | 0.532432 | 8_3:+28398847 | None:intergenic |
TCATCATTTGCCCACCATCA+AGG | 0.533627 | 8_3:+28401302 | None:intergenic |
GAGATATGGATGTTGACGAC+TGG | 0.534591 | 8_3:-28404785 | Msa1284990:CDS |
GAATTCCAAGGATACTAACT+TGG | 0.540130 | 8_3:+28400262 | None:intergenic |
CGTTGAAGAAGCAGAGGTGG+AGG | 0.540842 | 8_3:-28400778 | Msa1284990:CDS |
TAACCCATCTGAAGGGAGAC+GGG | 0.543018 | 8_3:+28401138 | None:intergenic |
TATACCTTTCGACTTGATTG+GGG | 0.545551 | 8_3:+28403375 | None:intergenic |
AATAAGACACCATACTTTGG+AGG | 0.546136 | 8_3:+28401917 | None:intergenic |
CCACCACCACCACCCAGATA+CGG | 0.546796 | 8_3:+28405795 | None:intergenic |
ATGTAAGTACGACCATTATG+AGG | 0.552449 | 8_3:+28400000 | None:intergenic |
ACCATAGTGTACTTGGAGAC+TGG | 0.555768 | 8_3:-28405111 | Msa1284990:CDS |
TAAAGCGTGCTAAGTGGTAC+TGG | 0.556543 | 8_3:+28399433 | None:intergenic |
GATGAATGCCACCATGCTGC+GGG | 0.556886 | 8_3:-28403632 | Msa1284990:CDS |
TGAATTCCAATTTGGAAATG+GGG | 0.557256 | 8_3:-28401947 | Msa1284990:CDS |
TGAATGTCTACTTGAGTACA+GGG | 0.558485 | 8_3:-28401895 | Msa1284990:CDS |
GATTGTGGAAGAATTTCGTA+AGG | 0.562819 | 8_3:-28401706 | Msa1284990:CDS |
AAACAAGATTCAAACATTCA+AGG | 0.564848 | 8_3:-28399317 | Msa1284990:intron |
GAAATTGAAACATTCTTATG+GGG | 0.565932 | 8_3:-28402155 | Msa1284990:CDS |
TACTTGAGAGATACCTGATC+CGG | 0.567364 | 8_3:+28400380 | None:intergenic |
TATTCGAAGAATTAGCCAAA+AGG | 0.567394 | 8_3:-28402588 | Msa1284990:CDS |
TTCAAGACTCTCACATGGAA+GGG | 0.567453 | 8_3:+28401255 | None:intergenic |
AACGTTCTTACTCAGATCCT+CGG | 0.568358 | 8_3:-28401989 | Msa1284990:intron |
TTTCAAGACTCTCACATGGA+AGG | 0.571188 | 8_3:+28401254 | None:intergenic |
ATTCATCCGTATCTGGGTGG+TGG | 0.571419 | 8_3:-28405801 | Msa1284990:five_prime_UTR |
CAGTCATTATACAAGCATAT+GGG | 0.573251 | 8_3:+28403603 | None:intergenic |
CTTTAAACCGACTCCGATGT+GGG | 0.574135 | 8_3:-28400961 | Msa1284990:CDS |
AGACGAACTAACCCATCTGA+AGG | 0.575050 | 8_3:+28401130 | None:intergenic |
AGATATGGATGTTGACGACT+GGG | 0.577332 | 8_3:-28404784 | Msa1284990:CDS |
GGAAACTCACCTCTGCAAGT+AGG | 0.579001 | 8_3:-28399952 | Msa1284990:CDS |
CTCTAGTGACTCATAATGAA+AGG | 0.580613 | 8_3:+28398905 | None:intergenic |
GCTCCCGTCTCCCTTCAGAT+GGG | 0.581607 | 8_3:-28401141 | Msa1284990:intron |
GGCCAAGATATTGACTGAGA+AGG | 0.583885 | 8_3:-28400067 | Msa1284990:CDS |
AGAATAACATAAGAAAGAGA+GGG | 0.586919 | 8_3:+28398719 | None:intergenic |
CAGCTTCAGTGCTTGCAACT+CGG | 0.587345 | 8_3:+28401206 | None:intergenic |
TACGATTCAGAAGAATTCCA+AGG | 0.588565 | 8_3:+28400250 | None:intergenic |
AAATGTGTCTTGCCTTAAGT+AGG | 0.590424 | 8_3:+28399721 | None:intergenic |
ATACAGGCTATTCATGTACA+AGG | 0.591808 | 8_3:-28400897 | Msa1284990:CDS |
AATGTATAAAGCGTGCTAAG+TGG | 0.593743 | 8_3:+28399427 | None:intergenic |
ATTATAGAGCAGAGTTCAGG+AGG | 0.593894 | 8_3:+28399463 | None:intergenic |
AGGGTCTTCTTAGTGTGAAG+AGG | 0.595542 | 8_3:-28398812 | Msa1284990:CDS |
AACACAGCAATGTAAGGAGA+AGG | 0.596438 | 8_3:+28405027 | None:intergenic |
TAGGTTCATCTAAGACTATG+AGG | 0.597562 | 8_3:-28405367 | Msa1284990:exon |
CGGAAACATTAATCTCTCAC+CGG | 0.599387 | 8_3:-28400399 | Msa1284990:CDS |
GGGTCTTCTTAGTGTGAAGA+GGG | 0.599511 | 8_3:-28398811 | Msa1284990:CDS |
AGGTTCATCTAAGACTATGA+GGG | 0.603801 | 8_3:-28405366 | Msa1284990:exon |
GTTCCTTAGAGGAAGAAGAA+AGG | 0.604366 | 8_3:+28405900 | None:intergenic |
TGGGATAAAGATGTATGGAA+AGG | 0.604556 | 8_3:-28404765 | Msa1284990:CDS |
TCAAGTCTATGCATGATCGA+TGG | 0.606209 | 8_3:+28399394 | None:intergenic |
ACTTTAAACCGACTCCGATG+TGG | 0.608145 | 8_3:-28400962 | Msa1284990:CDS |
TCACCTCTGCAAGTAGGGGA+TGG | 0.609707 | 8_3:-28399946 | Msa1284990:CDS |
AGAGAAAACTAAAAGAAAGA+GGG | 0.610583 | 8_3:+28405878 | None:intergenic |
CTTATTCATCCGTATCTGGG+TGG | 0.613059 | 8_3:-28405804 | Msa1284990:five_prime_UTR |
CTAACCCATCTGAAGGGAGA+CGG | 0.616544 | 8_3:+28401137 | None:intergenic |
TAGAGAAATACCTTGATGGT+GGG | 0.617516 | 8_3:-28401312 | Msa1284990:CDS |
GCCGTAAACTTGAGATACAT+CGG | 0.618277 | 8_3:-28400419 | Msa1284990:CDS |
ATTGTGGAAGAATTTCGTAA+GGG | 0.620812 | 8_3:-28401705 | Msa1284990:CDS |
ATGGGTGTCTACCCGCAGCA+TGG | 0.623501 | 8_3:+28403621 | None:intergenic |
TATGAGTCACTAGAGACACT+TGG | 0.623897 | 8_3:-28398897 | Msa1284990:CDS |
AGATGAATGCCACCATGCTG+CGG | 0.624147 | 8_3:-28403633 | Msa1284990:CDS |
TTTGAAAGCAATGAAATGGG+TGG | 0.627741 | 8_3:+28405763 | None:intergenic |
TGTCGTTGAAGAAGCAGAGG+TGG | 0.628120 | 8_3:-28400781 | Msa1284990:CDS |
ATTGTTAACCAATCAACAGA+TGG | 0.628559 | 8_3:+28400132 | None:intergenic |
GACGAACTAACCCATCTGAA+GGG | 0.632071 | 8_3:+28401131 | None:intergenic |
TGGTGGGCAAATGATGAGGA+AGG | 0.635071 | 8_3:-28401296 | Msa1284990:CDS |
TTAGAGAAATACCTTGATGG+TGG | 0.635106 | 8_3:-28401313 | Msa1284990:CDS |
GGTGTCTACCCGCAGCATGG+TGG | 0.636359 | 8_3:+28403624 | None:intergenic |
ACTGATATGATGGAATTGGA+CGG | 0.637117 | 8_3:-28399973 | Msa1284990:CDS |
GCATCCCCAATCAAGTCGAA+AGG | 0.637760 | 8_3:-28403379 | Msa1284990:intron |
CTGCTTCGTTGCTTGAGGCG+CGG | 0.637812 | 8_3:-28403692 | Msa1284990:CDS |
GTTTCCTCTATAGCAATAGA+CGG | 0.638364 | 8_3:+28400156 | None:intergenic |
TGTACAAAACTGCACACTGT+GGG | 0.639112 | 8_3:+28401509 | None:intergenic |
ATAGCTTCGAAGAAGCATGA+TGG | 0.639267 | 8_3:+28405068 | None:intergenic |
TACCGACACTGAATTGTAGA+CGG | 0.640019 | 8_3:+28400096 | None:intergenic |
TATTGTCGTTGAAGAAGCAG+AGG | 0.640281 | 8_3:-28400784 | Msa1284990:CDS |
TTCCGAAATACAATAGCTGG+AGG | 0.644123 | 8_3:-28401791 | Msa1284990:CDS |
GTCCAATTCCATCATATCAG+TGG | 0.645038 | 8_3:+28399975 | None:intergenic |
TCATGGATATAAACAAGCGA+AGG | 0.645726 | 8_3:-28399679 | Msa1284990:CDS |
TATAAACAAGCGAAGGACAG+AGG | 0.649601 | 8_3:-28399672 | Msa1284990:intron |
TTTCCGAATAGATTTGGACA+AGG | 0.650969 | 8_3:+28403222 | None:intergenic |
TCACTTTCAAGACTCTCACA+TGG | 0.651396 | 8_3:+28401250 | None:intergenic |
AATGACCAGAAAGTCATGCA+AGG | 0.651554 | 8_3:-28398931 | Msa1284990:CDS |
AAGCGTTCAATAGAACCTCA+AGG | 0.655412 | 8_3:+28401817 | None:intergenic |
TTCAGGAGGTAATTCAACAA+AGG | 0.657755 | 8_3:+28399477 | None:intergenic |
AAACTCACCTCTGCAAGTAG+GGG | 0.660284 | 8_3:-28399950 | Msa1284990:CDS |
ATCCGTCTACAATTCAGTGT+CGG | 0.662847 | 8_3:-28400098 | Msa1284990:CDS |
AATTCAGTGTCGGTATCATG+GGG | 0.664130 | 8_3:-28400088 | Msa1284990:CDS |
TCCGAAATACAATAGCTGGA+GGG | 0.665368 | 8_3:-28401790 | Msa1284990:CDS |
TCACCATCCCCTACTTGCAG+AGG | 0.666165 | 8_3:+28399943 | None:intergenic |
AGGAGAAATGGAGAAACATG+AGG | 0.668453 | 8_3:-28404745 | Msa1284990:intron |
ATGTATCAAAATCAGCACGA+GGG | 0.675838 | 8_3:-28398831 | Msa1284990:CDS |
TGTAAGGAGAAGGCTTTCGG+AGG | 0.676430 | 8_3:+28405037 | None:intergenic |
GATGACAGCATCACATACAC+AGG | 0.676901 | 8_3:+28402678 | None:intergenic |
ATTCTTATGGGGTATCTCTG+GGG | 0.678696 | 8_3:-28402144 | Msa1284990:CDS |
TTGATGGTGGGCAAATGATG+AGG | 0.681489 | 8_3:-28401300 | Msa1284990:CDS |
TGGAAGGGAAGAATGACGCA+AGG | 0.683651 | 8_3:+28401270 | None:intergenic |
GAGAAACCAAAACAACTTTG+GGG | 0.685636 | 8_3:+28404998 | None:intergenic |
TATGTATCAAAATCAGCACG+AGG | 0.689455 | 8_3:-28398832 | Msa1284990:CDS |
CTGTACAAAACTGCACACTG+TGG | 0.696807 | 8_3:+28401508 | None:intergenic |
GTTCTTACTCAGATCCTCGG+TGG | 0.719863 | 8_3:-28401986 | Msa1284990:intron |
GAATGTCTACTTGAGTACAG+GGG | 0.730135 | 8_3:-28401894 | Msa1284990:CDS |
TTGTCACCAATAGTCCACCG+AGG | 0.805282 | 8_3:+28401972 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTTTTTTTTTATAA+AGG | + | chr8_3:28400518-28400537 | None:intergenic | 0.0% |
!!! | ATTTTTTAATCTAACAATAT+CGG | + | chr8_3:28400320-28400339 | None:intergenic | 10.0% |
!!! | AATTTTTTAAATGTTTTTTC+CGG | - | chr8_3:28404960-28404979 | Msa1284990:intron | 10.0% |
!!! | TTACAATAATTTGTTAATAA+TGG | - | chr8_3:28405428-28405447 | Msa1284990:intron | 10.0% |
!!! | TACAATAATTTGTTAATAAT+GGG | - | chr8_3:28405429-28405448 | Msa1284990:intron | 10.0% |
!! | ATTTATTCTAAATATATCCT+TGG | - | chr8_3:28400584-28400603 | Msa1284990:CDS | 15.0% |
!! | AAAAATAAAAGTGAAGAAAA+AGG | + | chr8_3:28401330-28401349 | None:intergenic | 15.0% |
!!! | CTATATCATTAATTATCTTT+TGG | + | chr8_3:28401623-28401642 | None:intergenic | 15.0% |
!! | AAGACAATTATTACTTATTA+AGG | - | chr8_3:28402964-28402983 | Msa1284990:intron | 15.0% |
!! | TAATCAGAGAAAAATTAATA+TGG | + | chr8_3:28403509-28403528 | None:intergenic | 15.0% |
!!! | TAATTTGTCTTTGAAATTCT+TGG | - | chr8_3:28398904-28398923 | Msa1284990:CDS | 20.0% |
!!! | TTTTACTTGATTTATGTAGT+AGG | - | chr8_3:28399212-28399231 | Msa1284990:intron | 20.0% |
!! | AATCAACATTACAATGAAAA+GGG | + | chr8_3:28399348-28399367 | None:intergenic | 20.0% |
!! | ATTTGAAAATTGGAATGTAT+TGG | - | chr8_3:28399789-28399808 | Msa1284990:intron | 20.0% |
!! | TTTGAAAATTGGAATGTATT+GGG | - | chr8_3:28399790-28399809 | Msa1284990:intron | 20.0% |
!!! | ACATCGAATGAAATTTTTTT+AGG | + | chr8_3:28400379-28400398 | None:intergenic | 20.0% |
!! | TGTGTTTAATCAAACAATAT+CGG | + | chr8_3:28400433-28400452 | None:intergenic | 20.0% |
!! | TGTGATATTGTAAAGAAAAT+AGG | - | chr8_3:28400540-28400559 | Msa1284990:CDS | 20.0% |
!!! | AATTAATAGAAATTTTCTCG+AGG | + | chr8_3:28401253-28401272 | None:intergenic | 20.0% |
!! | TTAATGATATAGTATTGTCT+TGG | - | chr8_3:28401631-28401650 | Msa1284990:intron | 20.0% |
!! | TGCTAGAAATAACTAAAAAA+AGG | + | chr8_3:28401672-28401691 | None:intergenic | 20.0% |
!!! | TATTTTTGTTTTTGAATTGC+AGG | - | chr8_3:28401891-28401910 | Msa1284990:CDS | 20.0% |
!! | TAAGAATGTTTCAATTTCAA+TGG | + | chr8_3:28402441-28402460 | None:intergenic | 20.0% |
!! | TTGAAATTGAAACATTCTTA+TGG | - | chr8_3:28402441-28402460 | Msa1284990:intron | 20.0% |
!! | TGAAATTGAAACATTCTTAT+GGG | - | chr8_3:28402442-28402461 | Msa1284990:intron | 20.0% |
!! | TTAAGTATAATTTCAATGCT+TGG | + | chr8_3:28402555-28402574 | None:intergenic | 20.0% |
!!! | CATTTTGAATTTTTCTAGTT+TGG | + | chr8_3:28402871-28402890 | None:intergenic | 20.0% |
!! | AAAAATTCAAAATGAGATTG+TGG | - | chr8_3:28402877-28402896 | Msa1284990:intron | 20.0% |
!!! | AAGGAAATATTTTAATCTGT+AGG | - | chr8_3:28402983-28403002 | Msa1284990:intron | 20.0% |
!! | AAATTCAGATTACATATTGA+TGG | - | chr8_3:28403136-28403155 | Msa1284990:intron | 20.0% |
!! | ATTTAGAAATCACAATACTA+AGG | + | chr8_3:28403188-28403207 | None:intergenic | 20.0% |
!!! | AACAAAATAAAGATGTTTTG+TGG | + | chr8_3:28403228-28403247 | None:intergenic | 20.0% |
!! | GAAAAATTAATATGGAATGA+GGG | + | chr8_3:28403501-28403520 | None:intergenic | 20.0% |
!! | AGAAAAATTAATATGGAATG+AGG | + | chr8_3:28403502-28403521 | None:intergenic | 20.0% |
!! | ATAAAAGCAAAATGAATAGA+AGG | + | chr8_3:28403860-28403879 | None:intergenic | 20.0% |
!! | TCATTCAGAGAATTATTATA+TGG | + | chr8_3:28403930-28403949 | None:intergenic | 20.0% |
!!! | CCATGATAATAATTTTTTAC+TGG | + | chr8_3:28404905-28404924 | None:intergenic | 20.0% |
!! | CCAGTAAAAAATTATTATCA+TGG | - | chr8_3:28404902-28404921 | Msa1284990:intron | 20.0% |
!! | ACATCAATAGTATTAGTATT+TGG | + | chr8_3:28405053-28405072 | None:intergenic | 20.0% |
!!! | TAACTTTAAAAAGATGCATT+TGG | - | chr8_3:28405245-28405264 | Msa1284990:intron | 20.0% |
!!! | CTACAAATTTTTAGCTATTA+AGG | + | chr8_3:28405376-28405395 | None:intergenic | 20.0% |
! | TTTCTTCGTTCTTTCTTAAA+TGG | - | chr8_3:28398638-28398657 | Msa1284990:three_prime_UTR | 25.0% |
!!! | TCTTTTGAAAACAACACATA+CGG | - | chr8_3:28398663-28398682 | Msa1284990:three_prime_UTR | 25.0% |
! | AGAGAAAACTAAAAGAAAGA+GGG | + | chr8_3:28398723-28398742 | None:intergenic | 25.0% |
! | TAGAGAAAACTAAAAGAAAG+AGG | + | chr8_3:28398724-28398743 | None:intergenic | 25.0% |
! | TCTATAAAGATACACTCTTA+GGG | - | chr8_3:28398766-28398785 | Msa1284990:CDS | 25.0% |
!! | ACAACTTCAATTTGAAATGT+TGG | + | chr8_3:28399013-28399032 | None:intergenic | 25.0% |
! | CAATCAACATTACAATGAAA+AGG | + | chr8_3:28399349-28399368 | None:intergenic | 25.0% |
!!! | AATCACACTGATTTGAAAAT+TGG | - | chr8_3:28399779-28399798 | Msa1284990:intron | 25.0% |
! | TTGAAAATTGGAATGTATTG+GGG | - | chr8_3:28399791-28399810 | Msa1284990:intron | 25.0% |
! | ACCATAATCTATTTGTTTGT+CGG | - | chr8_3:28399951-28399970 | Msa1284990:CDS | 25.0% |
! | TTCATATATGAGATGAACAT+GGG | + | chr8_3:28399979-28399998 | None:intergenic | 25.0% |
! | TTTCATATATGAGATGAACA+TGG | + | chr8_3:28399980-28399999 | None:intergenic | 25.0% |
!!! | TTGTCTATTTTTTGCTCTAT+TGG | + | chr8_3:28400041-28400060 | None:intergenic | 25.0% |
! | TTGTTTAATACAAGAAGATG+TGG | + | chr8_3:28400089-28400108 | None:intergenic | 25.0% |
! | GCAATATTAGTTAGTTCATT+AGG | + | chr8_3:28400119-28400138 | None:intergenic | 25.0% |
!!! | TTTTTTAGGCACAATTTTTG+TGG | + | chr8_3:28400365-28400384 | None:intergenic | 25.0% |
!!! | TGTTAATTGAGCTAGTTTTA+TGG | + | chr8_3:28400407-28400426 | None:intergenic | 25.0% |
! | ACTATAATAACAATGATGAC+AGG | + | chr8_3:28400778-28400797 | None:intergenic | 25.0% |
! | TAGATAACTGTAATTACTGT+TGG | - | chr8_3:28400838-28400857 | Msa1284990:CDS | 25.0% |
! | TATCAAACTGTCAATGATAA+AGG | - | chr8_3:28400932-28400951 | Msa1284990:CDS | 25.0% |
! | AGACATCTATAATAACATAG+CGG | - | chr8_3:28401035-28401054 | Msa1284990:intron | 25.0% |
! | AGAAAAAATTGTACATAGAG+AGG | + | chr8_3:28401443-28401462 | None:intergenic | 25.0% |
! | ATATTCACAAAGAAGATAAG+GGG | + | chr8_3:28401509-28401528 | None:intergenic | 25.0% |
! | GATATTCACAAAGAAGATAA+GGG | + | chr8_3:28401510-28401529 | None:intergenic | 25.0% |
! | TGATATTCACAAAGAAGATA+AGG | + | chr8_3:28401511-28401530 | None:intergenic | 25.0% |
!! | CTCTGTAATGTATTTTCTTA+TGG | + | chr8_3:28401534-28401553 | None:intergenic | 25.0% |
! | GTTTGTTCCTGTAAAAATAT+TGG | - | chr8_3:28401704-28401723 | Msa1284990:CDS | 25.0% |
!!! | ACAACTTCCAATATTTTTAC+AGG | + | chr8_3:28401714-28401733 | None:intergenic | 25.0% |
! | TATTGGAAGTTGTATATTCT+AGG | - | chr8_3:28401721-28401740 | Msa1284990:CDS | 25.0% |
! | CAAAAGAGTAATACTAACAA+AGG | + | chr8_3:28401812-28401831 | None:intergenic | 25.0% |
!! | CTTTGTTAGTATTACTCTTT+TGG | - | chr8_3:28401810-28401829 | Msa1284990:CDS | 25.0% |
! | TACAACTCAATATTACTGTT+TGG | - | chr8_3:28401840-28401859 | Msa1284990:CDS | 25.0% |
! | AAATATGCACAACTAGAATT+TGG | + | chr8_3:28402141-28402160 | None:intergenic | 25.0% |
! | AGGAAACAATCAATTAAGAT+TGG | + | chr8_3:28402168-28402187 | None:intergenic | 25.0% |
! | AATTGATTGTTTCCTTGAAA+TGG | - | chr8_3:28402173-28402192 | Msa1284990:CDS | 25.0% |
! | ATTGATTGTTTCCTTGAAAT+GGG | - | chr8_3:28402174-28402193 | Msa1284990:CDS | 25.0% |
!!! | CTATTTTTTTGTAAGCAGAT+TGG | + | chr8_3:28402261-28402280 | None:intergenic | 25.0% |
! | TTCAATTTCAATGGAAGATA+AGG | + | chr8_3:28402432-28402451 | None:intergenic | 25.0% |
! | GAAATTGAAACATTCTTATG+GGG | - | chr8_3:28402443-28402462 | Msa1284990:intron | 25.0% |
! | TTGGTAGAATTATTACTAGA+TGG | + | chr8_3:28402536-28402555 | None:intergenic | 25.0% |
! | TGACAATATGAATTCCAATT+TGG | - | chr8_3:28402643-28402662 | Msa1284990:CDS | 25.0% |
! | TATGAATTCCAATTTGGAAA+TGG | - | chr8_3:28402649-28402668 | Msa1284990:CDS | 25.0% |
! | ATGAATTCCAATTTGGAAAT+GGG | - | chr8_3:28402650-28402669 | Msa1284990:CDS | 25.0% |
!! | TTGCTTTATTACAATACAGA+AGG | + | chr8_3:28402945-28402964 | None:intergenic | 25.0% |
!! | TAATAACCAGATTGCAATTT+TGG | + | chr8_3:28403055-28403074 | None:intergenic | 25.0% |
!! | ATTACATATTGATGGTAGAA+AGG | - | chr8_3:28403144-28403163 | Msa1284990:intron | 25.0% |
!! | ATTTTGTTCCAAAATTACAG+TGG | - | chr8_3:28403240-28403259 | Msa1284990:CDS | 25.0% |
! | TAAGTATATCAAAGTAATGC+TGG | + | chr8_3:28403433-28403452 | None:intergenic | 25.0% |
! | ACATCAAACAAAATCTTACA+GGG | - | chr8_3:28403955-28403974 | Msa1284990:intron | 25.0% |
! | AATTCAAATGGAACATAACT+TGG | + | chr8_3:28404005-28404024 | None:intergenic | 25.0% |
! | AAGTTATGTTCCATTTGAAT+TGG | - | chr8_3:28404004-28404023 | Msa1284990:intron | 25.0% |
!!! | TATGATTTGTTTTCTTTTCC+AGG | - | chr8_3:28404294-28404313 | Msa1284990:intron | 25.0% |
! | AATTCTTCTGAATCGTAAAA+CGG | - | chr8_3:28404354-28404373 | Msa1284990:intron | 25.0% |
!! | CAGAAGTAAGTTAATTTTTG+TGG | - | chr8_3:28404706-28404725 | Msa1284990:intron | 25.0% |
! | TCAAGTTAATTTATCAACTC+TGG | - | chr8_3:28404749-28404768 | Msa1284990:CDS | 25.0% |
! | AATTGACCGGATAATATATA+AGG | + | chr8_3:28404777-28404796 | None:intergenic | 25.0% |
! | ACCAAAATAGATAAATTGAC+CGG | + | chr8_3:28404790-28404809 | None:intergenic | 25.0% |
!!! | ATGTTTGAATCTTGTTTTGT+GGG | + | chr8_3:28405278-28405297 | None:intergenic | 25.0% |
!!! | AATGTTTGAATCTTGTTTTG+TGG | + | chr8_3:28405279-28405298 | None:intergenic | 25.0% |
! | AAACAAGATTCAAACATTCA+AGG | - | chr8_3:28405281-28405300 | Msa1284990:intron | 25.0% |
! | TAGATACAGAATTCTTTACT+TGG | + | chr8_3:28405341-28405360 | None:intergenic | 25.0% |
! | TTATTGTAAGAGAAAAATGC+AGG | + | chr8_3:28405417-28405436 | None:intergenic | 25.0% |
!!! | AATTTGTTAATAATGGGAAG+TGG | - | chr8_3:28405435-28405454 | Msa1284990:intron | 25.0% |
! | AGAATAACATAAGAAAGAGA+GGG | + | chr8_3:28405882-28405901 | None:intergenic | 25.0% |
! | AAGAATAACATAAGAAAGAG+AGG | + | chr8_3:28405883-28405902 | None:intergenic | 25.0% |
GTCTATAAAGATACACTCTT+AGG | - | chr8_3:28398765-28398784 | Msa1284990:CDS | 30.0% | |
! | TTTTCTTATTCATCCGTATC+TGG | - | chr8_3:28398790-28398809 | Msa1284990:CDS | 30.0% |
TTTCTTATTCATCCGTATCT+GGG | - | chr8_3:28398791-28398810 | Msa1284990:CDS | 30.0% | |
!! | CCTTTTGAAAGCAATGAAAT+GGG | + | chr8_3:28398841-28398860 | None:intergenic | 30.0% |
!! | ACCTTTTGAAAGCAATGAAA+TGG | + | chr8_3:28398842-28398861 | None:intergenic | 30.0% |
TCATTGCTTTCAAAAGGTAA+AGG | - | chr8_3:28398844-28398863 | Msa1284990:CDS | 30.0% | |
TTTCAAATTGAAGTTGTGTC+TGG | - | chr8_3:28399016-28399035 | Msa1284990:intron | 30.0% | |
AAAACTAACCTTCTAGCAAA+TGG | + | chr8_3:28399314-28399333 | None:intergenic | 30.0% | |
! | TTGAAGCATTACAGTTGAAA+TGG | - | chr8_3:28399370-28399389 | Msa1284990:CDS | 30.0% |
! | AGTACACTATGGTATTTTCA+CGG | + | chr8_3:28399480-28399499 | None:intergenic | 30.0% |
TGAAAATACCATAGTGTACT+TGG | - | chr8_3:28399480-28399499 | Msa1284990:CDS | 30.0% | |
TGAGAAACCAAAACAACTTT+GGG | + | chr8_3:28399604-28399623 | None:intergenic | 30.0% | |
TTGAGAAACCAAAACAACTT+TGG | + | chr8_3:28399605-28399624 | None:intergenic | 30.0% | |
AAAATAAGAAGGACATCCAT+TGG | + | chr8_3:28399906-28399925 | None:intergenic | 30.0% | |
TCCGACAAACAAATAGATTA+TGG | + | chr8_3:28399955-28399974 | None:intergenic | 30.0% | |
! | CTAACTAATATTGCTCCTTT+TGG | - | chr8_3:28400125-28400144 | Msa1284990:CDS | 30.0% |
TGAAAGGAATGAATTCCAAA+AGG | + | chr8_3:28400143-28400162 | None:intergenic | 30.0% | |
GAATGATGACATGTATATTC+AGG | + | chr8_3:28400203-28400222 | None:intergenic | 30.0% | |
GAATATACATGTCATCATTC+AGG | - | chr8_3:28400203-28400222 | Msa1284990:CDS | 30.0% | |
! | GTAATGCTTTTGAATGTTAC+AGG | - | chr8_3:28400860-28400879 | Msa1284990:CDS | 30.0% |
CAGTCATTATACAAGCATAT+GGG | + | chr8_3:28400998-28401017 | None:intergenic | 30.0% | |
ACAGTCATTATACAAGCATA+TGG | + | chr8_3:28400999-28401018 | None:intergenic | 30.0% | |
AACTACCACTTCAAACAATT+TGG | + | chr8_3:28401114-28401133 | None:intergenic | 30.0% | |
TATCATCATCAATTGAGATC+TGG | - | chr8_3:28401162-28401181 | Msa1284990:CDS | 30.0% | |
! | CATTAGTTTCCGAATAGATT+TGG | + | chr8_3:28401385-28401404 | None:intergenic | 30.0% |
AATGACTCTAATGCATTCAA+AGG | - | chr8_3:28401401-28401420 | Msa1284990:intron | 30.0% | |
TATGCATTTATTGTGTTCAG+TGG | - | chr8_3:28401472-28401491 | Msa1284990:CDS | 30.0% | |
TATTCGAAGAATTAGCCAAA+AGG | - | chr8_3:28402010-28402029 | Msa1284990:intron | 30.0% | |
!! | TTTTAACTCGTTAAGCCTTT+TGG | + | chr8_3:28402028-28402047 | None:intergenic | 30.0% |
CTGCTTACAAAAAAATAGCA+AGG | - | chr8_3:28402263-28402282 | Msa1284990:intron | 30.0% | |
CTCTTCTAAGCAAAAAATTG+AGG | + | chr8_3:28402299-28402318 | None:intergenic | 30.0% | |
!!! | ATTTTTTGCTTAGAAGAGCT+TGG | - | chr8_3:28402301-28402320 | Msa1284990:CDS | 30.0% |
!!! | CATCAACTGTTTTTTGTGAT+AGG | - | chr8_3:28402397-28402416 | Msa1284990:intron | 30.0% |
TGAATTCCAATTTGGAAATG+GGG | - | chr8_3:28402651-28402670 | Msa1284990:CDS | 30.0% | |
TTCAATAAGACACCATACTT+TGG | + | chr8_3:28402687-28402706 | None:intergenic | 30.0% | |
! | AATGAGATGCATAGTTTTTG+TGG | - | chr8_3:28402736-28402755 | Msa1284990:intron | 30.0% |
! | ATGCATAGTTTTTGTGGAAA+GGG | - | chr8_3:28402742-28402761 | Msa1284990:intron | 30.0% |
ATTGTGGAAGAATTTCGTAA+GGG | - | chr8_3:28402893-28402912 | Msa1284990:intron | 30.0% | |
! | TGCAAAAGAAGCATATCTTA+AGG | + | chr8_3:28403546-28403565 | None:intergenic | 30.0% |
! | ATGCTTCTTTTGCATTAATC+TGG | - | chr8_3:28403552-28403571 | Msa1284990:intron | 30.0% |
ATCGGGATAAAAAATTGAAG+AGG | + | chr8_3:28403579-28403598 | None:intergenic | 30.0% | |
CAAGTAGTGTGAAAAATGAA+AGG | + | chr8_3:28403888-28403907 | None:intergenic | 30.0% | |
GACATCAAACAAAATCTTAC+AGG | - | chr8_3:28403954-28403973 | Msa1284990:intron | 30.0% | |
AACATAACTTGGTTGTTCTT+CGG | + | chr8_3:28403994-28404013 | None:intergenic | 30.0% | |
! | ATCTTTTACACAAAAGAACC+TGG | + | chr8_3:28404315-28404334 | None:intergenic | 30.0% |
TCTTTCAGAAAAATTCTCTC+TGG | - | chr8_3:28404387-28404406 | Msa1284990:intron | 30.0% | |
ATTGTTAACCAATCAACAGA+TGG | + | chr8_3:28404469-28404488 | None:intergenic | 30.0% | |
!! | TTGATTTGTACTCCTCATAA+TGG | - | chr8_3:28404586-28404605 | Msa1284990:intron | 30.0% |
! | TCCGGTCAATTTATCTATTT+TGG | - | chr8_3:28404786-28404805 | Msa1284990:CDS | 30.0% |
! | TTTATCCTTTTCTGAGTTTC+AGG | - | chr8_3:28404822-28404841 | Msa1284990:CDS | 30.0% |
CTAAGGAAAGATTAAAGTAC+CGG | + | chr8_3:28404982-28405001 | None:intergenic | 30.0% | |
GTACTTTAATCTTTCCTTAG+TGG | - | chr8_3:28404982-28405001 | Msa1284990:intron | 30.0% | |
! | CTAAATCTTCTGTGCTTTTA+TGG | + | chr8_3:28405011-28405030 | None:intergenic | 30.0% |
CATCTGAAAAAGAAAAACAC+GGG | + | chr8_3:28405092-28405111 | None:intergenic | 30.0% | |
GCATCTGAAAAAGAAAAACA+CGG | + | chr8_3:28405093-28405112 | None:intergenic | 30.0% | |
AAGATTCAAACATTCAAGGT+GGG | - | chr8_3:28405285-28405304 | Msa1284990:intron | 30.0% | |
TAGTAGAAAACACTAAACTC+TGG | - | chr8_3:28405475-28405494 | Msa1284990:intron | 30.0% | |
! | AAAGATATTTGCACTGATGA+TGG | - | chr8_3:28405612-28405631 | Msa1284990:intron | 30.0% |
! | GTATCTGCATTTTGCATTTT+AGG | - | chr8_3:28405634-28405653 | Msa1284990:intron | 30.0% |
GATACATATTAAAGAGCTGT+CGG | + | chr8_3:28405754-28405773 | None:intergenic | 30.0% | |
TGAAAAGATAGCTTCATAAG+AGG | + | chr8_3:28405925-28405944 | None:intergenic | 30.0% | |
TTTGAAAGCAATGAAATGGG+TGG | + | chr8_3:28398838-28398857 | None:intergenic | 35.0% | |
CCCATTTCATTGCTTTCAAA+AGG | - | chr8_3:28398838-28398857 | Msa1284990:CDS | 35.0% | |
! | CAACACTAACTTGTAAACAC+AGG | + | chr8_3:28399125-28399144 | None:intergenic | 35.0% |
! | TAGGTTCATCTAAGACTATG+AGG | - | chr8_3:28399231-28399250 | Msa1284990:intron | 35.0% |
! | AGGTTCATCTAAGACTATGA+GGG | - | chr8_3:28399232-28399251 | Msa1284990:intron | 35.0% |
! | CTAGCAAATGGAAGTGTATT+AGG | + | chr8_3:28399302-28399321 | None:intergenic | 35.0% |
! | ATACACTTCCATTTGCTAGA+AGG | - | chr8_3:28399303-28399322 | Msa1284990:intron | 35.0% |
ACAGTTGAAATGGATGACTA+TGG | - | chr8_3:28399380-28399399 | Msa1284990:CDS | 35.0% | |
! | AATGGATGACTATGGTGTTT+TGG | - | chr8_3:28399388-28399407 | Msa1284990:CDS | 35.0% |
! | ATGGATGACTATGGTGTTTT+GGG | - | chr8_3:28399389-28399408 | Msa1284990:CDS | 35.0% |
! | TCCTTACATTGCTGTGTTTT+TGG | - | chr8_3:28399576-28399595 | Msa1284990:intron | 35.0% |
ACCAAAAACACAGCAATGTA+AGG | + | chr8_3:28399580-28399599 | None:intergenic | 35.0% | |
GAGAAACCAAAACAACTTTG+GGG | + | chr8_3:28399603-28399622 | None:intergenic | 35.0% | |
GATTTCTGTGTGATGAATGA+AGG | - | chr8_3:28399697-28399716 | Msa1284990:CDS | 35.0% | |
TGGGATAAAGATGTATGGAA+AGG | - | chr8_3:28399833-28399852 | Msa1284990:intron | 35.0% | |
AGATGTATGGAAAGGAGAAA+TGG | - | chr8_3:28399841-28399860 | Msa1284990:intron | 35.0% | |
AGAATACAAGACAGCATGAA+AGG | + | chr8_3:28400159-28400178 | None:intergenic | 35.0% | |
! | GCACAATTTTTGTGGCTTTT+GGG | + | chr8_3:28400357-28400376 | None:intergenic | 35.0% |
AATTGAGCACACATCTTCTA+TGG | + | chr8_3:28400629-28400648 | None:intergenic | 35.0% | |
ATAAGGGTAGTTGTGAGAAT+TGG | - | chr8_3:28400708-28400727 | Msa1284990:intron | 35.0% | |
TAAGGGTAGTTGTGAGAATT+GGG | - | chr8_3:28400709-28400728 | Msa1284990:intron | 35.0% | |
TCTTGCCAAATTGTTTGAAG+TGG | - | chr8_3:28401106-28401125 | Msa1284990:intron | 35.0% | |
! | ACTTTTGTCTGATTATGTGC+AGG | - | chr8_3:28401134-28401153 | Msa1284990:intron | 35.0% |
! | TATACCTTTCGACTTGATTG+GGG | + | chr8_3:28401226-28401245 | None:intergenic | 35.0% |
! | GTATACCTTTCGACTTGATT+GGG | + | chr8_3:28401227-28401246 | None:intergenic | 35.0% |
! | TGTATACCTTTCGACTTGAT+TGG | + | chr8_3:28401228-28401247 | None:intergenic | 35.0% |
TTTCCGAATAGATTTGGACA+AGG | + | chr8_3:28401379-28401398 | None:intergenic | 35.0% | |
TACATTACAGAGCCTATGAT+AGG | - | chr8_3:28401542-28401561 | Msa1284990:CDS | 35.0% | |
ACATTACAGAGCCTATGATA+GGG | - | chr8_3:28401543-28401562 | Msa1284990:CDS | 35.0% | |
TCTAGGAGTAATAACAATCC+AGG | - | chr8_3:28401738-28401757 | Msa1284990:CDS | 35.0% | |
CCTTTAATTGTACAACTTCC+TGG | + | chr8_3:28401759-28401778 | None:intergenic | 35.0% | |
CCAGGAAGTTGTACAATTAA+AGG | - | chr8_3:28401756-28401775 | Msa1284990:CDS | 35.0% | |
! | CCTGTAAAACAGGAATTTTG+GGG | + | chr8_3:28401968-28401987 | None:intergenic | 35.0% |
! | CCCTGTAAAACAGGAATTTT+GGG | + | chr8_3:28401969-28401988 | None:intergenic | 35.0% |
! | CCCAAAATTCCTGTTTTACA+GGG | - | chr8_3:28401966-28401985 | Msa1284990:CDS | 35.0% |
! | TCCCTGTAAAACAGGAATTT+TGG | + | chr8_3:28401970-28401989 | None:intergenic | 35.0% |
GCTTAACGAGTTAAAACAAC+AGG | - | chr8_3:28402032-28402051 | Msa1284990:intron | 35.0% | |
TTGGAGTCAGTGACATAAAA+TGG | + | chr8_3:28402122-28402141 | None:intergenic | 35.0% | |
TTCCTTGAAATGGGTGTATT+CGG | - | chr8_3:28402183-28402202 | Msa1284990:intron | 35.0% | |
AATAAGACACCATACTTTGG+AGG | + | chr8_3:28402684-28402703 | None:intergenic | 35.0% | |
TTGAATGTCTACTTGAGTAC+AGG | - | chr8_3:28402702-28402721 | Msa1284990:intron | 35.0% | |
TGAATGTCTACTTGAGTACA+GGG | - | chr8_3:28402703-28402722 | Msa1284990:intron | 35.0% | |
! | GATGCATAGTTTTTGTGGAA+AGG | - | chr8_3:28402741-28402760 | Msa1284990:intron | 35.0% |
!!! | TTGGTTTTGCAGTTTACTAC+CGG | + | chr8_3:28402852-28402871 | None:intergenic | 35.0% |
GATTGTGGAAGAATTTCGTA+AGG | - | chr8_3:28402892-28402911 | Msa1284990:intron | 35.0% | |
TGCAACATCAATTCTTGAAG+AGG | - | chr8_3:28403019-28403038 | Msa1284990:intron | 35.0% | |
GCAACATCAATTCTTGAAGA+GGG | - | chr8_3:28403020-28403039 | Msa1284990:intron | 35.0% | |
AGATGTCCAAAATTGCAATC+TGG | - | chr8_3:28403046-28403065 | Msa1284990:intron | 35.0% | |
GTAATCTGAATTTCGCATTC+TGG | + | chr8_3:28403129-28403148 | None:intergenic | 35.0% | |
CGATTAGAGAAATACCTTGA+TGG | - | chr8_3:28403282-28403301 | Msa1284990:intron | 35.0% | |
TTAGAGAAATACCTTGATGG+TGG | - | chr8_3:28403285-28403304 | Msa1284990:intron | 35.0% | |
! | TAGAGAAATACCTTGATGGT+GGG | - | chr8_3:28403286-28403305 | Msa1284990:intron | 35.0% |
TTGAGGTGAATGATGAAGAT+CGG | + | chr8_3:28403597-28403616 | None:intergenic | 35.0% | |
ATCTTCATCATTCACCTCAA+TGG | - | chr8_3:28403597-28403616 | Msa1284990:intron | 35.0% | |
TCTTCATCATTCACCTCAAT+GGG | - | chr8_3:28403598-28403617 | Msa1284990:intron | 35.0% | |
CTGATAGTTTAAACCCATTG+AGG | + | chr8_3:28403614-28403633 | None:intergenic | 35.0% | |
! | CTCAATGGGTTTAAACTATC+AGG | - | chr8_3:28403612-28403631 | Msa1284990:CDS | 35.0% |
TGTACATGAATAGCCTGTAT+AGG | + | chr8_3:28403701-28403720 | None:intergenic | 35.0% | |
ATACAGGCTATTCATGTACA+AGG | - | chr8_3:28403701-28403720 | Msa1284990:CDS | 35.0% | |
TGCAAACAGCTTCATAAGAT+TGG | - | chr8_3:28403764-28403783 | Msa1284990:intron | 35.0% | |
ATGCGATTCACCAATTCAAA+TGG | + | chr8_3:28404017-28404036 | None:intergenic | 35.0% | |
TCCGATGTATCTCAAGTTTA+CGG | + | chr8_3:28404183-28404202 | None:intergenic | 35.0% | |
TCAGACATATTTGCAAGTGT+TGG | - | chr8_3:28404255-28404274 | Msa1284990:intron | 35.0% | |
CAGACATATTTGCAAGTGTT+GGG | - | chr8_3:28404256-28404275 | Msa1284990:intron | 35.0% | |
AGATTCCAAGTTAGTATCCT+TGG | - | chr8_3:28404331-28404350 | Msa1284990:intron | 35.0% | |
GAATTCCAAGGATACTAACT+TGG | + | chr8_3:28404339-28404358 | None:intergenic | 35.0% | |
TACGATTCAGAAGAATTCCA+AGG | + | chr8_3:28404351-28404370 | None:intergenic | 35.0% | |
GTTTCCTCTATAGCAATAGA+CGG | + | chr8_3:28404445-28404464 | None:intergenic | 35.0% | |
ATGTAAGTACGACCATTATG+AGG | + | chr8_3:28404601-28404620 | None:intergenic | 35.0% | |
TTACATCACCACTGATATGA+TGG | - | chr8_3:28404615-28404634 | Msa1284990:intron | 35.0% | |
! | ACTGATATGATGGAATTGGA+CGG | - | chr8_3:28404625-28404644 | Msa1284990:intron | 35.0% |
!! | ACTACGTACAAGAAGTACTT+TGG | - | chr8_3:28404682-28404701 | Msa1284990:intron | 35.0% |
CTGGTGCCTTATATATTATC+CGG | - | chr8_3:28404768-28404787 | Msa1284990:CDS | 35.0% | |
AAATGTGTCTTGCCTTAAGT+AGG | + | chr8_3:28404880-28404899 | None:intergenic | 35.0% | |
TCATGGATATAAACAAGCGA+AGG | - | chr8_3:28404919-28404938 | Msa1284990:intron | 35.0% | |
TTCAGGAGGTAATTCAACAA+AGG | + | chr8_3:28405124-28405143 | None:intergenic | 35.0% | |
ATGATTATAGAGCAGAGTTC+AGG | + | chr8_3:28405141-28405160 | None:intergenic | 35.0% | |
AATGTATAAAGCGTGCTAAG+TGG | + | chr8_3:28405174-28405193 | None:intergenic | 35.0% | |
CAAGATTCAAACATTCAAGG+TGG | - | chr8_3:28405284-28405303 | Msa1284990:intron | 35.0% | |
!! | GCATTTTGCATTTTAGGTCT+TGG | - | chr8_3:28405640-28405659 | Msa1284990:intron | 35.0% |
CTCTAGTGACTCATAATGAA+AGG | + | chr8_3:28405696-28405715 | None:intergenic | 35.0% | |
TATGTATCAAAATCAGCACG+AGG | - | chr8_3:28405766-28405785 | Msa1284990:five_prime_UTR | 35.0% | |
ATGTATCAAAATCAGCACGA+GGG | - | chr8_3:28405767-28405786 | Msa1284990:five_prime_UTR | 35.0% | |
TTGCCTTTCTTCTTCCTCTA+AGG | - | chr8_3:28398695-28398714 | Msa1284990:CDS | 40.0% | |
GTTCCTTAGAGGAAGAAGAA+AGG | + | chr8_3:28398701-28398720 | None:intergenic | 40.0% | |
AAAGAAAGAGGGTTCCTTAG+AGG | + | chr8_3:28398712-28398731 | None:intergenic | 40.0% | |
CACTCTCTCTCTTGTTCTAA+AGG | + | chr8_3:28398945-28398964 | None:intergenic | 40.0% | |
TAGCTATCAGCTTGAAGCAT+TGG | - | chr8_3:28399444-28399463 | Msa1284990:CDS | 40.0% | |
! | ATAGCTTCGAAGAAGCATGA+TGG | + | chr8_3:28399533-28399552 | None:intergenic | 40.0% |
CAATGTAAGGAGAAGGCTTT+CGG | + | chr8_3:28399567-28399586 | None:intergenic | 40.0% | |
AACACAGCAATGTAAGGAGA+AGG | + | chr8_3:28399574-28399593 | None:intergenic | 40.0% | |
! | TTTGGTCCCCAAAGTTGTTT+TGG | - | chr8_3:28399594-28399613 | Msa1284990:intron | 40.0% |
GTGAACGAAACAAACAAGCA+CGG | + | chr8_3:28399728-28399747 | None:intergenic | 40.0% | |
TGGAATGTATTGGGGAGATA+TGG | - | chr8_3:28399799-28399818 | Msa1284990:intron | 40.0% | |
AGATATGGATGTTGACGACT+GGG | - | chr8_3:28399814-28399833 | Msa1284990:intron | 40.0% | |
ACGACTGGGATAAAGATGTA+TGG | - | chr8_3:28399828-28399847 | Msa1284990:intron | 40.0% | |
AGGAGAAATGGAGAAACATG+AGG | - | chr8_3:28399853-28399872 | Msa1284990:intron | 40.0% | |
AAATGGAGAAACATGAGGTG+AGG | - | chr8_3:28399858-28399877 | Msa1284990:intron | 40.0% | |
AATGGAGAAACATGAGGTGA+GGG | - | chr8_3:28399859-28399878 | Msa1284990:intron | 40.0% | |
TGCATTTCTATTGCGACCAA+TGG | - | chr8_3:28399887-28399906 | Msa1284990:intron | 40.0% | |
TACATGTCATCATTCAGGAG+CGG | - | chr8_3:28400208-28400227 | Msa1284990:CDS | 40.0% | |
! | GGCACAATTTTTGTGGCTTT+TGG | + | chr8_3:28400358-28400377 | None:intergenic | 40.0% |
! | GATTTTGCACACATCTTCCA+AGG | + | chr8_3:28400604-28400623 | None:intergenic | 40.0% |
AGAAAGCAGCAAGAGAAGAA+AGG | - | chr8_3:28400669-28400688 | Msa1284990:intron | 40.0% | |
ACGAGGTGGCAATAGAATAA+GGG | - | chr8_3:28400692-28400711 | Msa1284990:intron | 40.0% | |
ATAACAATGATGACAGGACC+TGG | + | chr8_3:28400772-28400791 | None:intergenic | 40.0% | |
ATATACTGCTTCGTTGCTTG+AGG | - | chr8_3:28400901-28400920 | Msa1284990:CDS | 40.0% | |
CGACCTTGTCCAAATCTATT+CGG | - | chr8_3:28401373-28401392 | Msa1284990:intron | 40.0% | |
ATAACAGTAGGCCCTATCAT+AGG | + | chr8_3:28401557-28401576 | None:intergenic | 40.0% | |
!!! | AGGAATTTTGGGGTAGATGT+CGG | + | chr8_3:28401958-28401977 | None:intergenic | 40.0% |
! | CCCCAAAATTCCTGTTTTAC+AGG | - | chr8_3:28401965-28401984 | Msa1284990:CDS | 40.0% |
! | TTCCTGTTTTACAGGGACAA+TGG | - | chr8_3:28401973-28401992 | Msa1284990:CDS | 40.0% |
! | TCCTGTTTTACAGGGACAAT+GGG | - | chr8_3:28401974-28401993 | Msa1284990:CDS | 40.0% |
AACCGAATACACCCATTTCA+AGG | + | chr8_3:28402188-28402207 | None:intergenic | 40.0% | |
GCTTAGAAGAGCTTGGTATT+TGG | - | chr8_3:28402308-28402327 | Msa1284990:CDS | 40.0% | |
AGAAGAGCTTGGTATTTGGT+TGG | - | chr8_3:28402312-28402331 | Msa1284990:CDS | 40.0% | |
!! | TGGTATTTGGTTGGCTTTGA+AGG | - | chr8_3:28402321-28402340 | Msa1284990:CDS | 40.0% |
ATAGAGTCACAGTAGCAGAA+GGG | + | chr8_3:28402353-28402372 | None:intergenic | 40.0% | |
AATAGAGTCACAGTAGCAGA+AGG | + | chr8_3:28402354-28402373 | None:intergenic | 40.0% | |
!!! | CTGTTTTTTGTGATAGGCTG+CGG | - | chr8_3:28402403-28402422 | Msa1284990:intron | 40.0% |
! | ACATTCTTATGGGGTATCTC+TGG | - | chr8_3:28402452-28402471 | Msa1284990:intron | 40.0% |
! | CATTCTTATGGGGTATCTCT+GGG | - | chr8_3:28402453-28402472 | Msa1284990:intron | 40.0% |
! | ATTCTTATGGGGTATCTCTG+GGG | - | chr8_3:28402454-28402473 | Msa1284990:intron | 40.0% |
AACGTTCTTACTCAGATCCT+CGG | - | chr8_3:28402609-28402628 | Msa1284990:CDS | 40.0% | |
CAATAGCCCCATTTCCAAAT+TGG | + | chr8_3:28402660-28402679 | None:intergenic | 40.0% | |
GAATGTCTACTTGAGTACAG+GGG | - | chr8_3:28402704-28402723 | Msa1284990:intron | 40.0% | |
AAGCGTTCAATAGAACCTCA+AGG | + | chr8_3:28402784-28402803 | None:intergenic | 40.0% | |
TGCTTCCGAAATACAATAGC+TGG | - | chr8_3:28402804-28402823 | Msa1284990:intron | 40.0% | |
TTCCGAAATACAATAGCTGG+AGG | - | chr8_3:28402807-28402826 | Msa1284990:intron | 40.0% | |
TCCGAAATACAATAGCTGGA+GGG | - | chr8_3:28402808-28402827 | Msa1284990:intron | 40.0% | |
GCTAAATTCATTGCAGGAAC+CGG | - | chr8_3:28402830-28402849 | Msa1284990:intron | 40.0% | |
GGAAGAATTTCGTAAGGGAT+TGG | - | chr8_3:28402898-28402917 | Msa1284990:intron | 40.0% | |
TGTACAAAACTGCACACTGT+GGG | + | chr8_3:28403092-28403111 | None:intergenic | 40.0% | |
! | CTGCATCACCACTGTAATTT+TGG | + | chr8_3:28403251-28403270 | None:intergenic | 40.0% |
TTCAAGACTCTCACATGGAA+GGG | + | chr8_3:28403346-28403365 | None:intergenic | 40.0% | |
TTTCAAGACTCTCACATGGA+AGG | + | chr8_3:28403347-28403366 | None:intergenic | 40.0% | |
TCACTTTCAAGACTCTCACA+TGG | + | chr8_3:28403351-28403370 | None:intergenic | 40.0% | |
TGAGGTGAATGATGAAGATC+GGG | + | chr8_3:28403596-28403615 | None:intergenic | 40.0% | |
!! | CCTTTTTGTTTGTCCCACAT+CGG | + | chr8_3:28403653-28403672 | None:intergenic | 40.0% |
TCCTAAGAGTTGTCCTATAC+AGG | - | chr8_3:28403685-28403704 | Msa1284990:CDS | 40.0% | |
GCTTCTTCAACGACAATAGA+AGG | + | chr8_3:28403812-28403831 | None:intergenic | 40.0% | |
TATTGTCGTTGAAGAAGCAG+AGG | - | chr8_3:28403814-28403833 | Msa1284990:intron | 40.0% | |
CTTGGTTGTTCTTCGGAATA+TGG | + | chr8_3:28403987-28404006 | None:intergenic | 40.0% | |
CCTCTGTCAAAACACATTTC+TGG | + | chr8_3:28404152-28404171 | None:intergenic | 40.0% | |
!!! | CCAGAAATGTGTTTTGACAG+AGG | - | chr8_3:28404149-28404168 | Msa1284990:intron | 40.0% |
GCCGTAAACTTGAGATACAT+CGG | - | chr8_3:28404179-28404198 | Msa1284990:intron | 40.0% | |
CGGAAACATTAATCTCTCAC+CGG | - | chr8_3:28404199-28404218 | Msa1284990:intron | 40.0% | |
TACTTGAGAGATACCTGATC+CGG | + | chr8_3:28404221-28404240 | None:intergenic | 40.0% | |
AGGAAACACCATCTGTTGAT+TGG | - | chr8_3:28404458-28404477 | Msa1284990:intron | 40.0% | |
CTGAATTGTAGACGGATGTA+TGG | + | chr8_3:28404497-28404516 | None:intergenic | 40.0% | |
ATCCGTCTACAATTCAGTGT+CGG | - | chr8_3:28404500-28404519 | Msa1284990:intron | 40.0% | |
TACCGACACTGAATTGTAGA+CGG | + | chr8_3:28404505-28404524 | None:intergenic | 40.0% | |
!! | ACAATTCAGTGTCGGTATCA+TGG | - | chr8_3:28404508-28404527 | Msa1284990:intron | 40.0% |
!! | CAATTCAGTGTCGGTATCAT+GGG | - | chr8_3:28404509-28404528 | Msa1284990:intron | 40.0% |
!! | AATTCAGTGTCGGTATCATG+GGG | - | chr8_3:28404510-28404529 | Msa1284990:intron | 40.0% |
! | GCCAAGATATTGACTGAGAA+GGG | - | chr8_3:28404532-28404551 | Msa1284990:intron | 40.0% |
ACCCTTCTCAGTCAATATCT+TGG | + | chr8_3:28404536-28404555 | None:intergenic | 40.0% | |
!!! | ACTGAGAAGGGTTTTGTTTG+TGG | - | chr8_3:28404544-28404563 | Msa1284990:intron | 40.0% |
! | CACCACTGATATGATGGAAT+TGG | - | chr8_3:28404621-28404640 | Msa1284990:intron | 40.0% |
GTCCAATTCCATCATATCAG+TGG | + | chr8_3:28404626-28404645 | None:intergenic | 40.0% | |
TGAACATCAACGCCTACTTA+AGG | - | chr8_3:28404865-28404884 | Msa1284990:intron | 40.0% | |
TATAAACAAGCGAAGGACAG+AGG | - | chr8_3:28404926-28404945 | Msa1284990:intron | 40.0% | |
! | TGCTTTTATGGACACCACTA+AGG | + | chr8_3:28404999-28405018 | None:intergenic | 40.0% |
!!! | TTCTTTTTCAGATGCGAGCA+AGG | - | chr8_3:28405098-28405117 | Msa1284990:CDS | 40.0% |
ATTATAGAGCAGAGTTCAGG+AGG | + | chr8_3:28405138-28405157 | None:intergenic | 40.0% | |
TCAAGTCTATGCATGATCGA+TGG | + | chr8_3:28405207-28405226 | None:intergenic | 40.0% | |
! | ACTTTTGTACTCCACTGTCT+TGG | - | chr8_3:28405528-28405547 | Msa1284990:intron | 40.0% |
GCATATACTGAGAAGACACT+TGG | - | chr8_3:28405563-28405582 | Msa1284990:intron | 40.0% | |
AATGACCAGAAAGTCATGCA+AGG | - | chr8_3:28405667-28405686 | Msa1284990:intron | 40.0% | |
TATGAGTCACTAGAGACACT+TGG | - | chr8_3:28405701-28405720 | Msa1284990:intron | 40.0% | |
! | TCTAAAATCGCAGCCTAACT+TGG | + | chr8_3:28405840-28405859 | None:intergenic | 40.0% |
GAGAGGGAAAGAAAGAATAC+CGG | + | chr8_3:28405866-28405885 | None:intergenic | 40.0% | |
CTTATTCATCCGTATCTGGG+TGG | - | chr8_3:28398794-28398813 | Msa1284990:CDS | 45.0% | |
ACCATAGTGTACTTGGAGAC+TGG | - | chr8_3:28399487-28399506 | Msa1284990:CDS | 45.0% | |
ACCAGTCTCCAAGTACACTA+TGG | + | chr8_3:28399491-28399510 | None:intergenic | 45.0% | |
GAGATATGGATGTTGACGAC+TGG | - | chr8_3:28399813-28399832 | Msa1284990:intron | 45.0% | |
ATGGAGAAACATGAGGTGAG+GGG | - | chr8_3:28399860-28399879 | Msa1284990:intron | 45.0% | |
ACCTGGACTCTCAATATCAC+TGG | - | chr8_3:28400231-28400250 | Msa1284990:CDS | 45.0% | |
CCTGGACTCTCAATATCACT+GGG | - | chr8_3:28400232-28400251 | Msa1284990:CDS | 45.0% | |
CTGGACTCTCAATATCACTG+GGG | - | chr8_3:28400233-28400252 | Msa1284990:CDS | 45.0% | |
!! | CTTCTCTTGCTGCTTTCTGT+TGG | + | chr8_3:28400667-28400686 | None:intergenic | 45.0% |
GACGAGGTGGCAATAGAATA+AGG | - | chr8_3:28400691-28400710 | Msa1284990:intron | 45.0% | |
TAGTTGTGAGAATTGGGCCT+GGG | - | chr8_3:28400715-28400734 | Msa1284990:intron | 45.0% | |
! | ACTGAGCTTCCTCGGATTTT+TGG | - | chr8_3:28401189-28401208 | Msa1284990:CDS | 45.0% |
! | CTGAGCTTCCTCGGATTTTT+GGG | - | chr8_3:28401190-28401209 | Msa1284990:CDS | 45.0% |
ATAGGGCCTACTGTTATGCA+TGG | - | chr8_3:28401560-28401579 | Msa1284990:CDS | 45.0% | |
GAGCATCCATGCATAACAGT+AGG | + | chr8_3:28401569-28401588 | None:intergenic | 45.0% | |
TGCATGGATGCTCAAGTGAA+AGG | - | chr8_3:28401576-28401595 | Msa1284990:CDS | 45.0% | |
GATGACAGCATCACATACAC+AGG | + | chr8_3:28401923-28401942 | None:intergenic | 45.0% | |
TCCCATTGTCCCTGTAAAAC+AGG | + | chr8_3:28401978-28401997 | None:intergenic | 45.0% | |
GGCTATTGACCTCCAAAGTA+TGG | - | chr8_3:28402672-28402691 | Msa1284990:CDS | 45.0% | |
CATTGCAGCTATTGTCCTTG+AGG | - | chr8_3:28402766-28402785 | Msa1284990:intron | 45.0% | |
GCCCTCCAGCTATTGTATTT+CGG | + | chr8_3:28402812-28402831 | None:intergenic | 45.0% | |
TGGAGGGCTAAATTCATTGC+AGG | - | chr8_3:28402824-28402843 | Msa1284990:intron | 45.0% | |
CTGTACAAAACTGCACACTG+TGG | + | chr8_3:28403093-28403112 | None:intergenic | 45.0% | |
CTGAATTTCGCATTCTGGCA+CGG | + | chr8_3:28403124-28403143 | None:intergenic | 45.0% | |
TCATCATTTGCCCACCATCA+AGG | + | chr8_3:28403299-28403318 | None:intergenic | 45.0% | |
!! | TTGATGGTGGGCAAATGATG+AGG | - | chr8_3:28403298-28403317 | Msa1284990:intron | 45.0% |
GACGAACTAACCCATCTGAA+GGG | + | chr8_3:28403470-28403489 | None:intergenic | 45.0% | |
AGACGAACTAACCCATCTGA+AGG | + | chr8_3:28403471-28403490 | None:intergenic | 45.0% | |
! | ACTTTAAACCGACTCCGATG+TGG | - | chr8_3:28403636-28403655 | Msa1284990:CDS | 45.0% |
! | CTTTAAACCGACTCCGATGT+GGG | - | chr8_3:28403637-28403656 | Msa1284990:CDS | 45.0% |
CCGATGTGGGACAAACAAAA+AGG | - | chr8_3:28403650-28403669 | Msa1284990:CDS | 45.0% | |
GCCTGTATAGGACAACTCTT+AGG | + | chr8_3:28403689-28403708 | None:intergenic | 45.0% | |
GAAGCTGTTTGCATGCTTCA+AGG | + | chr8_3:28403757-28403776 | None:intergenic | 45.0% | |
!!! | GTGTTTTGACAGAGGTAGTC+TGG | - | chr8_3:28404157-28404176 | Msa1284990:intron | 45.0% |
CATTAATCTCTCACCGGATC+AGG | - | chr8_3:28404205-28404224 | Msa1284990:intron | 45.0% | |
! | GGCCAAGATATTGACTGAGA+AGG | - | chr8_3:28404531-28404550 | Msa1284990:intron | 45.0% |
GAAACTCACCTCTGCAAGTA+GGG | - | chr8_3:28404647-28404666 | Msa1284990:intron | 45.0% | |
AAACTCACCTCTGCAAGTAG+GGG | - | chr8_3:28404648-28404667 | Msa1284990:intron | 45.0% | |
CCATGCCTGAAACTCAGAAA+AGG | + | chr8_3:28404830-28404849 | None:intergenic | 45.0% | |
! | CCTTTTCTGAGTTTCAGGCA+TGG | - | chr8_3:28404827-28404846 | Msa1284990:CDS | 45.0% |
TAAAGCGTGCTAAGTGGTAC+TGG | + | chr8_3:28405168-28405187 | None:intergenic | 45.0% | |
CATAGACTTGAGTCGTTGCT+TGG | - | chr8_3:28405216-28405235 | Msa1284990:intron | 45.0% | |
GTGTGTATTAGCCAAGACAG+TGG | + | chr8_3:28405542-28405561 | None:intergenic | 45.0% | |
AGGGTCTTCTTAGTGTGAAG+AGG | - | chr8_3:28405786-28405805 | Msa1284990:five_prime_UTR | 45.0% | |
GGGTCTTCTTAGTGTGAAGA+GGG | - | chr8_3:28405787-28405806 | Msa1284990:five_prime_UTR | 45.0% | |
! | AGGCTGCGATTTTAGACTTC+CGG | - | chr8_3:28405844-28405863 | Msa1284990:five_prime_UTR | 45.0% |
!! | TAATATTATATAAAATAAGA+AGG | + | chr8_3:28399917-28399936 | None:intergenic | 5.0% |
!!! | TATTTTATATAATATTAATC+TGG | - | chr8_3:28399920-28399939 | Msa1284990:CDS | 5.0% |
ATTCATCCGTATCTGGGTGG+TGG | - | chr8_3:28398797-28398816 | Msa1284990:CDS | 50.0% | |
! | GTCTGGTGTCTGACTTGTGT+CGG | - | chr8_3:28399033-28399052 | Msa1284990:intron | 50.0% |
! | GACTATGAGGGAAGCTCTGA+TGG | - | chr8_3:28399244-28399263 | Msa1284990:intron | 50.0% |
! | GAGGGAAGCTCTGATGGAAA+TGG | - | chr8_3:28399250-28399269 | Msa1284990:intron | 50.0% |
! | GTGTACTTGGAGACTGGTTC+TGG | - | chr8_3:28399493-28399512 | Msa1284990:intron | 50.0% |
TGTAAGGAGAAGGCTTTCGG+AGG | + | chr8_3:28399564-28399583 | None:intergenic | 50.0% | |
CCCAGTGATATTGAGAGTCC+AGG | + | chr8_3:28400235-28400254 | None:intergenic | 50.0% | |
CAGCAAGAGAAGAAAGGACG+AGG | - | chr8_3:28400675-28400694 | Msa1284990:intron | 50.0% | |
CAAGAGAAGAAAGGACGAGG+TGG | - | chr8_3:28400678-28400697 | Msa1284990:intron | 50.0% | |
GTAGTTGTGAGAATTGGGCC+TGG | - | chr8_3:28400714-28400733 | Msa1284990:intron | 50.0% | |
AGATGAATGCCACCATGCTG+CGG | - | chr8_3:28400965-28400984 | Msa1284990:CDS | 50.0% | |
CTGGTATCACTGAGCTTCCT+CGG | - | chr8_3:28401181-28401200 | Msa1284990:CDS | 50.0% | |
GCAGTCATCCCAAAAATCCG+AGG | + | chr8_3:28401201-28401220 | None:intergenic | 50.0% | |
GCATCCCCAATCAAGTCGAA+AGG | - | chr8_3:28401219-28401238 | Msa1284990:CDS | 50.0% | |
GTTCTTACTCAGATCCTCGG+TGG | - | chr8_3:28402612-28402631 | Msa1284990:CDS | 50.0% | |
!! | TCAGATCCTCGGTGGACTAT+TGG | - | chr8_3:28402620-28402639 | Msa1284990:CDS | 50.0% |
TTGTCACCAATAGTCCACCG+AGG | + | chr8_3:28402629-28402648 | None:intergenic | 50.0% | |
AACTGCACACTGTGGGAGAT+GGG | + | chr8_3:28403085-28403104 | None:intergenic | 50.0% | |
AAACTGCACACTGTGGGAGA+TGG | + | chr8_3:28403086-28403105 | None:intergenic | 50.0% | |
!! | TGCAGTTTTGTACAGTCCCG+AGG | - | chr8_3:28403098-28403117 | Msa1284990:intron | 50.0% |
! | TGGTGGGCAAATGATGAGGA+AGG | - | chr8_3:28403302-28403321 | Msa1284990:intron | 50.0% |
TGGAAGGGAAGAATGACGCA+AGG | + | chr8_3:28403331-28403350 | None:intergenic | 50.0% | |
CAGCTTCAGTGCTTGCAACT+CGG | + | chr8_3:28403395-28403414 | None:intergenic | 50.0% | |
TAACCCATCTGAAGGGAGAC+GGG | + | chr8_3:28403463-28403482 | None:intergenic | 50.0% | |
CTAACCCATCTGAAGGGAGA+CGG | + | chr8_3:28403464-28403483 | None:intergenic | 50.0% | |
TGTTTGTCCCACATCGGAGT+CGG | + | chr8_3:28403647-28403666 | None:intergenic | 50.0% | |
TGTCGTTGAAGAAGCAGAGG+TGG | - | chr8_3:28403817-28403836 | Msa1284990:intron | 50.0% | |
GAAGCAGAGGTGGAGGAATT+TGG | - | chr8_3:28403827-28403846 | Msa1284990:intron | 50.0% | |
CTATAGCAATAGACGGCAGC+AGG | + | chr8_3:28404438-28404457 | None:intergenic | 50.0% | |
GCTGCCGTCTATTGCTATAG+AGG | - | chr8_3:28404438-28404457 | Msa1284990:intron | 50.0% | |
GGAAACTCACCTCTGCAAGT+AGG | - | chr8_3:28404646-28404665 | Msa1284990:intron | 50.0% | |
GGTCTCCTTGCATGACTTTC+TGG | + | chr8_3:28405675-28405694 | None:intergenic | 50.0% | |
AATGCTGCGCTCTCCAAGTT+AGG | - | chr8_3:28405824-28405843 | Msa1284990:five_prime_UTR | 50.0% | |
TCATCATTCAGGAGCGGACC+TGG | - | chr8_3:28400214-28400233 | Msa1284990:CDS | 55.0% | |
ATGATGACAGGACCTGGCCA+AGG | + | chr8_3:28400766-28400785 | None:intergenic | 55.0% | |
GATGAATGCCACCATGCTGC+GGG | - | chr8_3:28400966-28400985 | Msa1284990:CDS | 55.0% | |
CGTTGAAGAAGCAGAGGTGG+AGG | - | chr8_3:28403820-28403839 | Msa1284990:intron | 55.0% | |
TCACCTCTGCAAGTAGGGGA+TGG | - | chr8_3:28404652-28404671 | Msa1284990:intron | 55.0% | |
TCACCATCCCCTACTTGCAG+AGG | + | chr8_3:28404658-28404677 | None:intergenic | 55.0% | |
! | CATCCGTATCTGGGTGGTGG+TGG | - | chr8_3:28398800-28398819 | Msa1284990:CDS | 60.0% |
CCACCACCACCACCCAGATA+CGG | + | chr8_3:28398806-28398825 | None:intergenic | 60.0% | |
!! | TATCTGGGTGGTGGTGGTGG+TGG | - | chr8_3:28398806-28398825 | Msa1284990:CDS | 60.0% |
TGTGAGAATTGGGCCTGGGC+TGG | - | chr8_3:28400719-28400738 | Msa1284990:intron | 60.0% | |
GGTGTGGCACTTGCCACACT+AGG | - | chr8_3:28400740-28400759 | Msa1284990:intron | 60.0% | |
GCACTTGCCACACTAGGCCT+TGG | - | chr8_3:28400746-28400765 | Msa1284990:intron | 60.0% | |
CTGCTTCGTTGCTTGAGGCG+CGG | - | chr8_3:28400906-28400925 | Msa1284990:CDS | 60.0% | |
ATGGGTGTCTACCCGCAGCA+TGG | + | chr8_3:28400980-28400999 | None:intergenic | 60.0% | |
TTCGCATTCTGGCACGGCCT+CGG | + | chr8_3:28403118-28403137 | None:intergenic | 60.0% | |
TGCTCCCGTCTCCCTTCAGA+TGG | - | chr8_3:28403456-28403475 | Msa1284990:intron | 60.0% | |
GCTCCCGTCTCCCTTCAGAT+GGG | - | chr8_3:28403457-28403476 | Msa1284990:intron | 60.0% | |
!! | CCGTATCTGGGTGGTGGTGG+TGG | - | chr8_3:28398803-28398822 | Msa1284990:CDS | 65.0% |
!! | GAATTGGGCCTGGGCTGGTG+TGG | - | chr8_3:28400724-28400743 | Msa1284990:intron | 65.0% |
TGCCACACTAGGCCTTGGCC+AGG | - | chr8_3:28400751-28400770 | Msa1284990:intron | 65.0% | |
GACCTGGCCAAGGCCTAGTG+TGG | + | chr8_3:28400756-28400775 | None:intergenic | 65.0% | |
GGTGTCTACCCGCAGCATGG+TGG | + | chr8_3:28400977-28400996 | None:intergenic | 65.0% | |
TCGCATTCTGGCACGGCCTC+GGG | + | chr8_3:28403117-28403136 | None:intergenic | 65.0% | |
!! | CTGGGTGGTGGTGGTGGTGG+TGG | - | chr8_3:28398809-28398828 | Msa1284990:CDS | 70.0% |
GGCAAGTGCCACACCAGCCC+AGG | + | chr8_3:28400735-28400754 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 28398636 | 28405984 | 28398636 | ID=Msa1284990;Name=Msa1284990 |
chr8_3 | mRNA | 28398636 | 28405984 | 28398636 | ID=Msa1284990-mRNA-1;Parent=Msa1284990;Name=Msa1284990-mRNA-1;_AED=0.10;_eAED=0.10;_QI=241|1|1|1|0.94|0.89|19|53|1051 |
chr8_3 | exon | 28398636 | 28398964 | 28398636 | ID=Msa1284990-mRNA-1:exon:9578;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28399318 | 28399511 | 28399318 | ID=Msa1284990-mRNA-1:exon:9577;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28399673 | 28399776 | 28399673 | ID=Msa1284990-mRNA-1:exon:9576;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28399910 | 28400304 | 28399910 | ID=Msa1284990-mRNA-1:exon:9575;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28400394 | 28400644 | 28400394 | ID=Msa1284990-mRNA-1:exon:9574;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28400772 | 28400986 | 28400772 | ID=Msa1284990-mRNA-1:exon:9573;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28401142 | 28401360 | 28401142 | ID=Msa1284990-mRNA-1:exon:9572;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28401455 | 28401615 | 28401455 | ID=Msa1284990-mRNA-1:exon:9571;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28401701 | 28401996 | 28401701 | ID=Msa1284990-mRNA-1:exon:9570;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28402081 | 28402201 | 28402081 | ID=Msa1284990-mRNA-1:exon:9569;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28402278 | 28402406 | 28402278 | ID=Msa1284990-mRNA-1:exon:9568;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28402567 | 28402707 | 28402567 | ID=Msa1284990-mRNA-1:exon:9567;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28403198 | 28403262 | 28403198 | ID=Msa1284990-mRNA-1:exon:9566;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28403380 | 28403464 | 28403380 | ID=Msa1284990-mRNA-1:exon:9565;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28403604 | 28403738 | 28403604 | ID=Msa1284990-mRNA-1:exon:9564;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28404746 | 28404859 | 28404746 | ID=Msa1284990-mRNA-1:exon:9563;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28404996 | 28405173 | 28404996 | ID=Msa1284990-mRNA-1:exon:9562;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28405296 | 28405389 | 28405296 | ID=Msa1284990-mRNA-1:exon:9561;Parent=Msa1284990-mRNA-1 |
chr8_3 | exon | 28405761 | 28405984 | 28405761 | ID=Msa1284990-mRNA-1:exon:9560;Parent=Msa1284990-mRNA-1 |
chr8_3 | five_prime_UTR | 28405761 | 28405984 | 28405761 | ID=Msa1284990-mRNA-1:five_prime_utr;Parent=Msa1284990-mRNA-1 |
chr8_3 | five_prime_UTR | 28405373 | 28405389 | 28405373 | ID=Msa1284990-mRNA-1:five_prime_utr;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28405296 | 28405372 | 28405296 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28404996 | 28405173 | 28404996 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28404746 | 28404859 | 28404746 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28403604 | 28403738 | 28403604 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28403380 | 28403464 | 28403380 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28403198 | 28403262 | 28403198 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28402567 | 28402707 | 28402567 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28402278 | 28402406 | 28402278 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28402081 | 28402201 | 28402081 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28401701 | 28401996 | 28401701 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28401455 | 28401615 | 28401455 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28401142 | 28401360 | 28401142 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28400772 | 28400986 | 28400772 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28400394 | 28400644 | 28400394 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28399910 | 28400304 | 28399910 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28399673 | 28399776 | 28399673 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28399318 | 28399511 | 28399318 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | CDS | 28398689 | 28398964 | 28398689 | ID=Msa1284990-mRNA-1:cds;Parent=Msa1284990-mRNA-1 |
chr8_3 | three_prime_UTR | 28398636 | 28398688 | 28398636 | ID=Msa1284990-mRNA-1:three_prime_utr;Parent=Msa1284990-mRNA-1 |
Gene Sequence |
Protein sequence |