Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244230 | XP_024632504.1 | 95.312 | 128 | 6 | 0 | 116 | 243 | 273 | 400 | 1.57e-80 | 257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244230 | sp|F4KA50|LRL22_ARATH | 33.654 | 104 | 66 | 3 | 117 | 219 | 521 | 622 | 9.77e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244230 | A2Q1L8 | 95.312 | 128 | 6 | 0 | 116 | 243 | 339 | 466 | 2.51e-80 | 258 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0201570 | Msa0244230 | 0.809389 | 1.938542e-50 | -8.615850e-47 |
| Msa0244230 | Msa0347750 | 0.800437 | 1.442216e-48 | -8.615850e-47 |
| Msa0244230 | Msa1153390 | 0.815230 | 1.028407e-51 | -8.615850e-47 |
| Msa0244230 | Msa1177560 | 0.810947 | 8.944796e-51 | -8.615850e-47 |
| Msa0244230 | Msa1225100 | 0.806546 | 7.805526e-50 | -8.615850e-47 |
| Msa0244230 | Msa1329870 | 0.805323 | 1.410726e-49 | -8.615850e-47 |
| Msa0244230 | Msa1405220 | 0.801105 | 1.053358e-48 | -8.615850e-47 |
| Msa0244230 | Msa1430130 | 0.804496 | 2.100734e-49 | -8.615850e-47 |
| Msa0244230 | Msa1431750 | 0.916099 | 2.674646e-85 | -8.615850e-47 |
| Msa0244230 | Msa1460750 | 0.803532 | 3.332746e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244230 | MtrunA17_Chr2g0297951 | 95.312 | 128 | 6 | 0 | 116 | 243 | 339 | 466 | 4.84e-84 | 258 |
| Msa0244230 | MtrunA17_Chr2g0297921 | 89.062 | 128 | 14 | 0 | 116 | 243 | 349 | 476 | 2.25e-77 | 241 |
| Msa0244230 | MtrunA17_Chr2g0297941 | 78.505 | 107 | 23 | 0 | 116 | 222 | 298 | 404 | 1.04e-51 | 172 |
| Msa0244230 | MtrunA17_Chr2g0297911 | 52.941 | 102 | 46 | 1 | 117 | 218 | 281 | 380 | 5.44e-29 | 112 |
| Msa0244230 | MtrunA17_Chr2g0297901 | 44.697 | 132 | 67 | 3 | 117 | 243 | 182 | 312 | 4.61e-28 | 108 |
| Msa0244230 | MtrunA17_Chr2g0297961 | 50.000 | 100 | 50 | 0 | 117 | 216 | 280 | 379 | 1.43e-26 | 106 |
| Msa0244230 | MtrunA17_Chr1g0158151 | 40.179 | 112 | 58 | 5 | 119 | 229 | 597 | 700 | 4.35e-15 | 74.3 |
| Msa0244230 | MtrunA17_Chr1g0158751 | 40.367 | 109 | 57 | 4 | 119 | 223 | 307 | 411 | 5.02e-15 | 73.6 |
| Msa0244230 | MtrunA17_Chr1g0158141 | 46.914 | 81 | 38 | 4 | 140 | 219 | 10 | 86 | 6.28e-14 | 66.2 |
| Msa0244230 | MtrunA17_Chr1g0158631 | 38.182 | 110 | 61 | 4 | 119 | 227 | 595 | 698 | 9.37e-14 | 70.5 |
| Msa0244230 | MtrunA17_Chr1g0158571 | 38.053 | 113 | 63 | 4 | 119 | 230 | 424 | 530 | 1.70e-13 | 69.3 |
| Msa0244230 | MtrunA17_Chr1g0158661 | 38.182 | 110 | 61 | 4 | 119 | 227 | 581 | 684 | 1.71e-13 | 69.7 |
| Msa0244230 | MtrunA17_Chr1g0158041 | 37.143 | 105 | 53 | 3 | 119 | 222 | 602 | 694 | 3.01e-13 | 68.9 |
| Msa0244230 | MtrunA17_Chr1g0157811 | 34.513 | 113 | 65 | 4 | 119 | 225 | 411 | 520 | 3.25e-13 | 68.6 |
| Msa0244230 | MtrunA17_Chr1g0157791 | 34.513 | 113 | 65 | 4 | 119 | 225 | 598 | 707 | 4.13e-13 | 68.6 |
| Msa0244230 | MtrunA17_Chr1g0158301 | 44.156 | 77 | 38 | 3 | 119 | 193 | 605 | 678 | 7.53e-13 | 67.8 |
| Msa0244230 | MtrunA17_Chr1g0158761 | 41.772 | 79 | 42 | 3 | 118 | 195 | 545 | 620 | 1.13e-12 | 67.0 |
| Msa0244230 | MtrunA17_Chr1g0157951 | 33.333 | 117 | 67 | 5 | 119 | 230 | 392 | 502 | 2.06e-12 | 66.2 |
| Msa0244230 | MtrunA17_Chr6g0484051 | 42.105 | 76 | 40 | 2 | 119 | 193 | 562 | 634 | 2.86e-12 | 65.9 |
| Msa0244230 | MtrunA17_Chr1g0158191 | 41.558 | 77 | 39 | 3 | 119 | 193 | 602 | 674 | 2.95e-12 | 65.9 |
| Msa0244230 | MtrunA17_Chr1g0158311 | 38.824 | 85 | 47 | 2 | 120 | 203 | 501 | 581 | 3.21e-12 | 65.9 |
| Msa0244230 | MtrunA17_Chr1g0158541 | 38.158 | 76 | 44 | 2 | 119 | 193 | 607 | 680 | 3.42e-12 | 65.9 |
| Msa0244230 | MtrunA17_Chr1g0158531 | 36.471 | 85 | 49 | 2 | 120 | 203 | 503 | 583 | 3.66e-12 | 65.5 |
| Msa0244230 | MtrunA17_Chr1g0157911 | 35.398 | 113 | 66 | 4 | 119 | 227 | 610 | 719 | 7.25e-12 | 64.7 |
| Msa0244230 | MtrunA17_Chr6g0483791 | 41.772 | 79 | 43 | 2 | 117 | 194 | 580 | 656 | 7.64e-12 | 64.7 |
| Msa0244230 | MtrunA17_Chr7g0250891 | 39.241 | 79 | 42 | 3 | 119 | 194 | 21 | 96 | 7.83e-12 | 60.5 |
| Msa0244230 | MtrunA17_Chr2g0312561 | 38.393 | 112 | 61 | 3 | 120 | 227 | 253 | 360 | 8.03e-12 | 64.3 |
| Msa0244230 | MtrunA17_Chr1g0157991 | 42.029 | 69 | 35 | 2 | 119 | 186 | 605 | 669 | 8.89e-12 | 64.3 |
| Msa0244230 | MtrunA17_Chr1g0158091 | 43.421 | 76 | 39 | 2 | 119 | 193 | 283 | 355 | 1.58e-11 | 63.2 |
| Msa0244230 | MtrunA17_Chr4g0037001 | 43.243 | 74 | 36 | 3 | 123 | 194 | 524 | 593 | 1.79e-11 | 63.5 |
| Msa0244230 | MtrunA17_Chr6g0483811 | 40.506 | 79 | 44 | 2 | 117 | 194 | 269 | 345 | 2.83e-11 | 62.4 |
| Msa0244230 | MtrunA17_Chr2g0311521 | 32.558 | 86 | 46 | 2 | 115 | 194 | 946 | 1025 | 3.48e-11 | 62.8 |
| Msa0244230 | MtrunA17_Chr1g0209491 | 37.662 | 77 | 45 | 2 | 119 | 194 | 16 | 90 | 3.66e-11 | 58.5 |
| Msa0244230 | MtrunA17_Chr1g0157931 | 36.538 | 104 | 59 | 4 | 119 | 218 | 484 | 584 | 3.69e-11 | 62.4 |
| Msa0244230 | MtrunA17_Chr1g0209421 | 41.026 | 78 | 41 | 3 | 119 | 194 | 16 | 90 | 3.85e-11 | 58.5 |
| Msa0244230 | MtrunA17_Chr3g0088321 | 40.260 | 77 | 40 | 3 | 119 | 193 | 264 | 336 | 3.96e-11 | 62.0 |
| Msa0244230 | MtrunA17_Chr7g0251081 | 36.364 | 77 | 46 | 2 | 119 | 194 | 323 | 397 | 5.22e-11 | 62.0 |
| Msa0244230 | MtrunA17_Chr1g0160721 | 31.897 | 116 | 62 | 5 | 119 | 231 | 563 | 664 | 5.40e-11 | 62.0 |
| Msa0244230 | MtrunA17_Chr2g0312571 | 44.118 | 68 | 38 | 0 | 120 | 187 | 258 | 325 | 6.44e-11 | 61.6 |
| Msa0244230 | MtrunA17_Chr4g0022331 | 40.260 | 77 | 41 | 3 | 119 | 193 | 746 | 819 | 6.89e-11 | 62.0 |
| Msa0244230 | MtrunA17_Chr1g0158341 | 34.862 | 109 | 56 | 5 | 119 | 216 | 240 | 344 | 6.96e-11 | 61.2 |
| Msa0244230 | MtrunA17_Chr1g0209471 | 41.026 | 78 | 41 | 3 | 119 | 194 | 278 | 352 | 8.21e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0244230 | AT1G70250.1 | 31.731 | 208 | 109 | 8 | 18 | 197 | 549 | 751 | 6.32e-15 | 74.3 |
| Msa0244230 | AT5G38240.2 | 33.654 | 104 | 66 | 3 | 117 | 219 | 521 | 622 | 9.93e-15 | 73.6 |
| Msa0244230 | AT5G38240.3 | 33.654 | 104 | 66 | 3 | 117 | 219 | 475 | 576 | 1.00e-14 | 73.6 |
| Msa0244230 | AT5G38240.1 | 33.654 | 104 | 66 | 3 | 117 | 219 | 539 | 640 | 1.02e-14 | 73.6 |
| Msa0244230 | AT5G38280.1 | 28.962 | 183 | 105 | 7 | 33 | 194 | 441 | 619 | 4.46e-12 | 65.9 |
| Msa0244230 | AT5G38280.2 | 29.091 | 220 | 126 | 10 | 33 | 231 | 441 | 651 | 5.05e-12 | 65.5 |
| Msa0244230 | AT4G18250.1 | 31.034 | 232 | 129 | 10 | 23 | 226 | 451 | 679 | 5.80e-12 | 65.5 |
| Msa0244230 | AT5G38250.1 | 36.986 | 73 | 45 | 1 | 119 | 191 | 520 | 591 | 1.26e-11 | 64.3 |
| Msa0244230 | AT5G39020.1 | 38.158 | 76 | 45 | 2 | 119 | 193 | 706 | 780 | 4.25e-11 | 62.8 |
| Msa0244230 | AT1G66980.1 | 37.805 | 82 | 49 | 2 | 119 | 199 | 1018 | 1098 | 4.44e-11 | 62.8 |
| Msa0244230 | AT1G66980.4 | 37.805 | 82 | 49 | 2 | 119 | 199 | 1001 | 1081 | 4.56e-11 | 62.8 |
| Msa0244230 | AT1G66980.2 | 37.805 | 82 | 49 | 2 | 119 | 199 | 1047 | 1127 | 4.76e-11 | 62.8 |
| Msa0244230 | AT1G66980.3 | 37.805 | 82 | 49 | 2 | 119 | 199 | 1045 | 1125 | 4.99e-11 | 62.8 |
| Msa0244230 | AT5G39030.2 | 34.375 | 96 | 59 | 3 | 119 | 213 | 704 | 796 | 8.75e-11 | 62.0 |
| Msa0244230 | AT5G39030.1 | 33.673 | 98 | 61 | 3 | 117 | 213 | 708 | 802 | 9.10e-11 | 62.0 |
Find 54 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTTCCCATGTCCATTT+TGG | 0.139479 | 2_2:-22422616 | None:intergenic |
| TGGGGTCAAAATGGCAAATT+TGG | 0.213425 | 2_2:-22420774 | None:intergenic |
| CGCTAATAGCGCAGTTCTTC+GGG | 0.230893 | 2_2:+22420742 | Msa0244230:CDS |
| CGCAACAATGGTTTCCAAAA+TGG | 0.234146 | 2_2:+22422602 | Msa0244230:CDS |
| TCCATTTCCCTTTCATAATC+TGG | 0.243247 | 2_2:+22422816 | Msa0244230:CDS |
| GGATCGATTTGGATGAGTTT+TGG | 0.261930 | 2_2:-22420794 | None:intergenic |
| TGGATGGGCCAACATGCTTT+TGG | 0.266399 | 2_2:-22420651 | None:intergenic |
| TCGCTAATAGCGCAGTTCTT+CGG | 0.283861 | 2_2:+22420741 | Msa0244230:CDS |
| TGCAGGGCAAACCTGGTTTC+CGG | 0.318292 | 2_2:-22421787 | None:intergenic |
| TCTCTTAGCTTCTGAATTCA+TGG | 0.326613 | 2_2:+22421980 | Msa0244230:CDS |
| GCGCTATTAGCGTAGCCTTC+TGG | 0.340137 | 2_2:-22420671 | None:intergenic |
| CTCATTAGAGGTCTATCATT+TGG | 0.367852 | 2_2:-22422748 | None:intergenic |
| AATCTCAAATGCATTGTGTT+TGG | 0.370293 | 2_2:-22422941 | None:intergenic |
| GGTGCATTACAGGATCGATT+TGG | 0.379091 | 2_2:-22420805 | None:intergenic |
| CCGGTAGGACTCCAGTTAAA+AGG | 0.380877 | 2_2:-22421768 | None:intergenic |
| AATGTTTGAGAATAATGAAT+TGG | 0.409015 | 2_2:+22422633 | Msa0244230:CDS |
| TTCAGACAGGGCCACGCCCC+AGG | 0.427856 | 2_2:-22420695 | None:intergenic |
| ACAGAATCTTCAAGAGAATC+TGG | 0.429294 | 2_2:+22422910 | Msa0244230:CDS |
| GTTGTTATGCTTGCACTTTG+TGG | 0.437207 | 2_2:+22422655 | Msa0244230:CDS |
| TTCACAACAGTACTCATTAG+AGG | 0.440428 | 2_2:-22422760 | None:intergenic |
| GATAGCAGAGAGAATGTTGA+AGG | 0.456537 | 2_2:+22422699 | Msa0244230:CDS |
| GGACCCTAGAATGGACCAAC+AGG | 0.465583 | 2_2:+22420628 | None:intergenic |
| GAATGTTGAAGGTTGCTCTA+TGG | 0.470015 | 2_2:+22422710 | Msa0244230:CDS |
| GGTAATTCATATATCTTGTC+GGG | 0.475980 | 2_2:+22422002 | Msa0244230:CDS |
| ACCAGATTATGAAAGGGAAA+TGG | 0.476262 | 2_2:-22422817 | None:intergenic |
| GGGTAATTCATATATCTTGT+CGG | 0.484556 | 2_2:+22422001 | Msa0244230:CDS |
| TACTGTTGTGAAGATGTTAG+AGG | 0.490511 | 2_2:+22422771 | Msa0244230:CDS |
| CTCTTAGCTTCTGAATTCAT+GGG | 0.490936 | 2_2:+22421981 | Msa0244230:CDS |
| AGCAGGAACCAGATTATGAA+AGG | 0.498465 | 2_2:-22422824 | None:intergenic |
| CTAATAGCGCACCTGGGGCG+TGG | 0.506155 | 2_2:+22420684 | Msa0244230:CDS |
| AATAGCGAAATTCTTCAGAC+AGG | 0.509704 | 2_2:-22420708 | None:intergenic |
| GGCTACGCTAATAGCGCACC+TGG | 0.518973 | 2_2:+22420677 | Msa0244230:CDS |
| CTGGAGTCCTACCGGAAACC+AGG | 0.523953 | 2_2:+22421776 | Msa0244230:CDS |
| GCAGGAACCAGATTATGAAA+GGG | 0.539493 | 2_2:-22422823 | None:intergenic |
| TAAAGAAAATTTGACACAAG+AGG | 0.554088 | 2_2:+22422846 | Msa0244230:CDS |
| AAAGAAAATTTGACACAAGA+GGG | 0.562254 | 2_2:+22422847 | Msa0244230:CDS |
| GAGCATGTAAGTTACAAGAT+GGG | 0.565802 | 2_2:-22422068 | None:intergenic |
| AGCGCAGTTCTTCGGGTCTG+TGG | 0.567874 | 2_2:+22420749 | Msa0244230:CDS |
| GAATTCAGAAGCTAAGAGAA+TGG | 0.582531 | 2_2:-22421976 | None:intergenic |
| GCTACGCTAATAGCGCACCT+GGG | 0.594999 | 2_2:+22420678 | Msa0244230:CDS |
| CTGATACGACTACATCATCA+TGG | 0.600921 | 2_2:+22422884 | Msa0244230:CDS |
| TATTAGCGTAGCCTTCTGGA+TGG | 0.602588 | 2_2:-22420667 | None:intergenic |
| AGCATGTTGGCCCATCCAGA+AGG | 0.602855 | 2_2:+22420656 | Msa0244230:CDS |
| AATGGTTTCCAAAATGGACA+TGG | 0.605792 | 2_2:+22422608 | Msa0244230:CDS |
| GTTATAGTGAATCGCAACAA+TGG | 0.606927 | 2_2:+22422590 | Msa0244230:intron |
| ATTCATATATCTTGTCGGGA+AGG | 0.615582 | 2_2:+22422006 | Msa0244230:CDS |
| ATTAGCGTAGCCTTCTGGAT+GGG | 0.622665 | 2_2:-22420666 | None:intergenic |
| CCAACAGGCCAAAAGCATGT+TGG | 0.626059 | 2_2:+22420643 | Msa0244230:CDS |
| AGATTATGAAAGGGAAATGG+AGG | 0.627739 | 2_2:-22422814 | None:intergenic |
| ACTGTTGTGAAGATGTTAGA+GGG | 0.632455 | 2_2:+22422772 | Msa0244230:CDS |
| ATGGTTTCCAAAATGGACAT+GGG | 0.633578 | 2_2:+22422609 | Msa0244230:CDS |
| ATAGCGAAATTCTTCAGACA+GGG | 0.634569 | 2_2:-22420707 | None:intergenic |
| CTACGCTAATAGCGCACCTG+GGG | 0.639825 | 2_2:+22420679 | Msa0244230:CDS |
| GGGCAAACCTGGTTTCCGGT+AGG | 0.649732 | 2_2:-22421783 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTTAATTAATTATATGAA+TGG | - | chr2_2:22421732-22421751 | None:intergenic | 10.0% |
| !! | ATTCATATAATTAATTAACT+TGG | + | chr2_2:22421731-22421750 | Msa0244230:intron | 10.0% |
| !! | AAGTTAATTAATTATATGAA+TGG | - | chr2_2:22421732-22421751 | None:intergenic | 10.0% |
| !! | ATTCATATAATTAATTAACT+TGG | + | chr2_2:22421731-22421750 | Msa0244230:intron | 10.0% |
| !! | TCTTTAAATAACATATTTCA+TGG | + | chr2_2:22420852-22420871 | Msa0244230:intron | 15.0% |
| !! | AATTAATCAAAAGAACATTA+GGG | + | chr2_2:22420898-22420917 | Msa0244230:intron | 15.0% |
| !!! | TTCACAAAAATTCTTTTAAA+AGG | - | chr2_2:22422329-22422348 | None:intergenic | 15.0% |
| !!! | AAAACTCCTAAATTTAAAAT+GGG | - | chr2_2:22422395-22422414 | None:intergenic | 15.0% |
| !! | AAAAACTCCTAAATTTAAAA+TGG | - | chr2_2:22422396-22422415 | None:intergenic | 15.0% |
| !! | TCTTTAAATAACATATTTCA+TGG | + | chr2_2:22420852-22420871 | Msa0244230:intron | 15.0% |
| !! | AATTAATCAAAAGAACATTA+GGG | + | chr2_2:22420898-22420917 | Msa0244230:intron | 15.0% |
| !!! | TTCACAAAAATTCTTTTAAA+AGG | - | chr2_2:22422329-22422348 | None:intergenic | 15.0% |
| !!! | AAAACTCCTAAATTTAAAAT+GGG | - | chr2_2:22422395-22422414 | None:intergenic | 15.0% |
| !! | AAAAACTCCTAAATTTAAAA+TGG | - | chr2_2:22422396-22422415 | None:intergenic | 15.0% |
| !! | GAATTAATCAAAAGAACATT+AGG | + | chr2_2:22420897-22420916 | Msa0244230:intron | 20.0% |
| !!! | AGGACGATTTTTTTTTTAAA+GGG | - | chr2_2:22421526-22421545 | None:intergenic | 20.0% |
| !! | AATTTACTCTTTCATAAACT+TGG | + | chr2_2:22421618-22421637 | Msa0244230:intron | 20.0% |
| !! | AGAATTGTTAAGATAAGTAA+AGG | - | chr2_2:22421906-22421925 | None:intergenic | 20.0% |
| !!! | TCAATACCCATTTTAAATTT+AGG | + | chr2_2:22422386-22422405 | Msa0244230:intron | 20.0% |
| !! | TTTAACAAATTTGACATAAG+AGG | + | chr2_2:22422456-22422475 | Msa0244230:intron | 20.0% |
| !! | TTAACAAATTTGACATAAGA+GGG | + | chr2_2:22422457-22422476 | Msa0244230:intron | 20.0% |
| !! | AATGTTTGAGAATAATGAAT+TGG | + | chr2_2:22422633-22422652 | Msa0244230:CDS | 20.0% |
| !! | GAATTAATCAAAAGAACATT+AGG | + | chr2_2:22420897-22420916 | Msa0244230:intron | 20.0% |
| !!! | AGGACGATTTTTTTTTTAAA+GGG | - | chr2_2:22421526-22421545 | None:intergenic | 20.0% |
| !! | AATTTACTCTTTCATAAACT+TGG | + | chr2_2:22421618-22421637 | Msa0244230:intron | 20.0% |
| !! | AGAATTGTTAAGATAAGTAA+AGG | - | chr2_2:22421906-22421925 | None:intergenic | 20.0% |
| !!! | TCAATACCCATTTTAAATTT+AGG | + | chr2_2:22422386-22422405 | Msa0244230:intron | 20.0% |
| !! | TTTAACAAATTTGACATAAG+AGG | + | chr2_2:22422456-22422475 | Msa0244230:intron | 20.0% |
| !! | TTAACAAATTTGACATAAGA+GGG | + | chr2_2:22422457-22422476 | Msa0244230:intron | 20.0% |
| !! | AATGTTTGAGAATAATGAAT+TGG | + | chr2_2:22422633-22422652 | Msa0244230:CDS | 20.0% |
| ! | TTAAAGACATTATATGTTGC+TGG | - | chr2_2:22420839-22420858 | None:intergenic | 25.0% |
| !!! | TGTTGATTTATGTTTATGAG+GGG | - | chr2_2:22420931-22420950 | None:intergenic | 25.0% |
| !!! | GTGTTGATTTATGTTTATGA+GGG | - | chr2_2:22420932-22420951 | None:intergenic | 25.0% |
| !!! | AGTGTTGATTTATGTTTATG+AGG | - | chr2_2:22420933-22420952 | None:intergenic | 25.0% |
| ! | ATTTAAGTATTTACGCACAT+GGG | - | chr2_2:22421315-22421334 | None:intergenic | 25.0% |
| ! | TTATCTGTTAAATGTATCAG+AGG | - | chr2_2:22421463-22421482 | None:intergenic | 25.0% |
| !!! | ACGATTTTTTTTTTAAAGGG+GGG | - | chr2_2:22421523-22421542 | None:intergenic | 25.0% |
| !!! | GACGATTTTTTTTTTAAAGG+GGG | - | chr2_2:22421524-22421543 | None:intergenic | 25.0% |
| !!! | GGACGATTTTTTTTTTAAAG+GGG | - | chr2_2:22421525-22421544 | None:intergenic | 25.0% |
| !!! | GAGGACGATTTTTTTTTTAA+AGG | - | chr2_2:22421527-22421546 | None:intergenic | 25.0% |
| !! | AGTAAATTTTCCACAATATG+AGG | - | chr2_2:22421606-22421625 | None:intergenic | 25.0% |
| ! | ACGTTATGTGAATTTGATAT+GGG | - | chr2_2:22421706-22421725 | None:intergenic | 25.0% |
| ! | TACGTTATGTGAATTTGATA+TGG | - | chr2_2:22421707-22421726 | None:intergenic | 25.0% |
| ! | AAGATTTCTTAAGACTCTAA+AGG | - | chr2_2:22421944-22421963 | None:intergenic | 25.0% |
| !! | GTTTTCTAAACATGAGTATT+CGG | + | chr2_2:22422278-22422297 | Msa0244230:intron | 25.0% |
| ! | TAAAGAAAATTTGACACAAG+AGG | + | chr2_2:22422846-22422865 | Msa0244230:CDS | 25.0% |
| ! | AAAGAAAATTTGACACAAGA+GGG | + | chr2_2:22422847-22422866 | Msa0244230:CDS | 25.0% |
| ! | TTAAAGACATTATATGTTGC+TGG | - | chr2_2:22420839-22420858 | None:intergenic | 25.0% |
| !!! | TGTTGATTTATGTTTATGAG+GGG | - | chr2_2:22420931-22420950 | None:intergenic | 25.0% |
| !!! | GTGTTGATTTATGTTTATGA+GGG | - | chr2_2:22420932-22420951 | None:intergenic | 25.0% |
| !!! | AGTGTTGATTTATGTTTATG+AGG | - | chr2_2:22420933-22420952 | None:intergenic | 25.0% |
| ! | ATTTAAGTATTTACGCACAT+GGG | - | chr2_2:22421315-22421334 | None:intergenic | 25.0% |
| ! | TTATCTGTTAAATGTATCAG+AGG | - | chr2_2:22421463-22421482 | None:intergenic | 25.0% |
| !!! | ACGATTTTTTTTTTAAAGGG+GGG | - | chr2_2:22421523-22421542 | None:intergenic | 25.0% |
| !!! | GACGATTTTTTTTTTAAAGG+GGG | - | chr2_2:22421524-22421543 | None:intergenic | 25.0% |
| !!! | GGACGATTTTTTTTTTAAAG+GGG | - | chr2_2:22421525-22421544 | None:intergenic | 25.0% |
| !!! | GAGGACGATTTTTTTTTTAA+AGG | - | chr2_2:22421527-22421546 | None:intergenic | 25.0% |
| !! | AGTAAATTTTCCACAATATG+AGG | - | chr2_2:22421606-22421625 | None:intergenic | 25.0% |
| ! | ACGTTATGTGAATTTGATAT+GGG | - | chr2_2:22421706-22421725 | None:intergenic | 25.0% |
| ! | TACGTTATGTGAATTTGATA+TGG | - | chr2_2:22421707-22421726 | None:intergenic | 25.0% |
| ! | AAGATTTCTTAAGACTCTAA+AGG | - | chr2_2:22421944-22421963 | None:intergenic | 25.0% |
| !! | GTTTTCTAAACATGAGTATT+CGG | + | chr2_2:22422278-22422297 | Msa0244230:intron | 25.0% |
| ! | TAAAGAAAATTTGACACAAG+AGG | + | chr2_2:22422846-22422865 | Msa0244230:CDS | 25.0% |
| ! | AAAGAAAATTTGACACAAGA+GGG | + | chr2_2:22422847-22422866 | Msa0244230:CDS | 25.0% |
| TATATGTTGCTGGATGATTA+TGG | - | chr2_2:22420829-22420848 | None:intergenic | 30.0% | |
| ATAGATAGTTTACCTACCTT+TGG | - | chr2_2:22420977-22420996 | None:intergenic | 30.0% | |
| AAAGGTAGGTAAACTATCTA+TGG | + | chr2_2:22420976-22420995 | Msa0244230:intron | 30.0% | |
| GATATGCAAGAAACATGATT+AGG | - | chr2_2:22421008-22421027 | None:intergenic | 30.0% | |
| AAAGAATGAAGTGAAAGCTA+GGG | - | chr2_2:22421050-22421069 | None:intergenic | 30.0% | |
| !! | TGGGAGTATATAAGCATTTT+CGG | - | chr2_2:22421296-22421315 | None:intergenic | 30.0% |
| CATTTAAGTATTTACGCACA+TGG | - | chr2_2:22421316-22421335 | None:intergenic | 30.0% | |
| TTAAATGTATCAGAGGACTA+AGG | - | chr2_2:22421456-22421475 | None:intergenic | 30.0% | |
| TAAGGGATTTCTAAATTTCG+AGG | - | chr2_2:22421546-22421565 | None:intergenic | 30.0% | |
| AGAAATCCCTTAACATTTAC+TGG | + | chr2_2:22421554-22421573 | Msa0244230:intron | 30.0% | |
| GAAATCCCTTAACATTTACT+GGG | + | chr2_2:22421555-22421574 | Msa0244230:intron | 30.0% | |
| TTGAACCCAGTAAATGTTAA+GGG | - | chr2_2:22421563-22421582 | None:intergenic | 30.0% | |
| TTGAAGTAATCCTCATATTG+TGG | + | chr2_2:22421593-22421612 | Msa0244230:intron | 30.0% | |
| ! | ATTAATTAACTTGGACACTC+AGG | + | chr2_2:22421740-22421759 | Msa0244230:intron | 30.0% |
| GGGTAATTCATATATCTTGT+CGG | + | chr2_2:22422001-22422020 | Msa0244230:CDS | 30.0% | |
| GGTAATTCATATATCTTGTC+GGG | + | chr2_2:22422002-22422021 | Msa0244230:CDS | 30.0% | |
| !! | TAAGAGTATTCAAATGCAAG+AGG | - | chr2_2:22422112-22422131 | None:intergenic | 30.0% |
| GAAGTTCAAGAACTTCATTA+TGG | - | chr2_2:22422524-22422543 | None:intergenic | 30.0% | |
| ! | TGTGTCAAATTTTCTTTAGC+AGG | - | chr2_2:22422844-22422863 | None:intergenic | 30.0% |
| AATCTCAAATGCATTGTGTT+TGG | - | chr2_2:22422944-22422963 | None:intergenic | 30.0% | |
| TATATGTTGCTGGATGATTA+TGG | - | chr2_2:22420829-22420848 | None:intergenic | 30.0% | |
| ATAGATAGTTTACCTACCTT+TGG | - | chr2_2:22420977-22420996 | None:intergenic | 30.0% | |
| AAAGGTAGGTAAACTATCTA+TGG | + | chr2_2:22420976-22420995 | Msa0244230:intron | 30.0% | |
| GATATGCAAGAAACATGATT+AGG | - | chr2_2:22421008-22421027 | None:intergenic | 30.0% | |
| AAAGAATGAAGTGAAAGCTA+GGG | - | chr2_2:22421050-22421069 | None:intergenic | 30.0% | |
| !! | TGGGAGTATATAAGCATTTT+CGG | - | chr2_2:22421296-22421315 | None:intergenic | 30.0% |
| CATTTAAGTATTTACGCACA+TGG | - | chr2_2:22421316-22421335 | None:intergenic | 30.0% | |
| TTAAATGTATCAGAGGACTA+AGG | - | chr2_2:22421456-22421475 | None:intergenic | 30.0% | |
| TAAGGGATTTCTAAATTTCG+AGG | - | chr2_2:22421546-22421565 | None:intergenic | 30.0% | |
| AGAAATCCCTTAACATTTAC+TGG | + | chr2_2:22421554-22421573 | Msa0244230:intron | 30.0% | |
| GAAATCCCTTAACATTTACT+GGG | + | chr2_2:22421555-22421574 | Msa0244230:intron | 30.0% | |
| TTGAACCCAGTAAATGTTAA+GGG | - | chr2_2:22421563-22421582 | None:intergenic | 30.0% | |
| TTGAAGTAATCCTCATATTG+TGG | + | chr2_2:22421593-22421612 | Msa0244230:intron | 30.0% | |
| ! | ATTAATTAACTTGGACACTC+AGG | + | chr2_2:22421740-22421759 | Msa0244230:intron | 30.0% |
| GGGTAATTCATATATCTTGT+CGG | + | chr2_2:22422001-22422020 | Msa0244230:CDS | 30.0% | |
| GGTAATTCATATATCTTGTC+GGG | + | chr2_2:22422002-22422021 | Msa0244230:CDS | 30.0% | |
| !! | TAAGAGTATTCAAATGCAAG+AGG | - | chr2_2:22422112-22422131 | None:intergenic | 30.0% |
| GAAGTTCAAGAACTTCATTA+TGG | - | chr2_2:22422524-22422543 | None:intergenic | 30.0% | |
| ! | TGTGTCAAATTTTCTTTAGC+AGG | - | chr2_2:22422844-22422863 | None:intergenic | 30.0% |
| AATCTCAAATGCATTGTGTT+TGG | - | chr2_2:22422944-22422963 | None:intergenic | 30.0% | |
| ATAGCGAAATTCTTCAGACA+GGG | - | chr2_2:22420710-22420729 | None:intergenic | 35.0% | |
| AATAGCGAAATTCTTCAGAC+AGG | - | chr2_2:22420711-22420730 | None:intergenic | 35.0% | |
| !!! | ATCGATTTGGATGAGTTTTG+GGG | - | chr2_2:22420795-22420814 | None:intergenic | 35.0% |
| !!! | GATCGATTTGGATGAGTTTT+GGG | - | chr2_2:22420796-22420815 | None:intergenic | 35.0% |
| GCATGAATTTACACAACCAA+AGG | + | chr2_2:22420958-22420977 | Msa0244230:intron | 35.0% | |
| GAATTTACACAACCAAAGGT+AGG | + | chr2_2:22420962-22420981 | Msa0244230:intron | 35.0% | |
| CAAAGAATGAAGTGAAAGCT+AGG | - | chr2_2:22421051-22421070 | None:intergenic | 35.0% | |
| AAGGGATTTAAGCATGGTTT+GGG | - | chr2_2:22421089-22421108 | None:intergenic | 35.0% | |
| ACTCTTTCAAGATCAACTTG+TGG | - | chr2_2:22421161-22421180 | None:intergenic | 35.0% | |
| TGATCTTGAAAGAGTTTGAG+TGG | + | chr2_2:22421166-22421185 | Msa0244230:intron | 35.0% | |
| GATCTTGAAAGAGTTTGAGT+GGG | + | chr2_2:22421167-22421186 | Msa0244230:intron | 35.0% | |
| ! | GGAGTATATAAGCATTTTCG+GGG | - | chr2_2:22421294-22421313 | None:intergenic | 35.0% |
| !! | GGGAGTATATAAGCATTTTC+GGG | - | chr2_2:22421295-22421314 | None:intergenic | 35.0% |
| TGAACTTATGTATCAGTGTC+AGG | - | chr2_2:22421361-22421380 | None:intergenic | 35.0% | |
| GTGAAGAATGTTAAGTACGA+CGG | - | chr2_2:22421414-22421433 | None:intergenic | 35.0% | |
| AGTTTACTTTAGCTGATGAG+CGG | + | chr2_2:22421483-22421502 | Msa0244230:intron | 35.0% | |
| CTTGAACCCAGTAAATGTTA+AGG | - | chr2_2:22421564-22421583 | None:intergenic | 35.0% | |
| GAATTCAGAAGCTAAGAGAA+TGG | - | chr2_2:22421979-22421998 | None:intergenic | 35.0% | |
| TCTCTTAGCTTCTGAATTCA+TGG | + | chr2_2:22421980-22421999 | Msa0244230:CDS | 35.0% | |
| CTCTTAGCTTCTGAATTCAT+GGG | + | chr2_2:22421981-22422000 | Msa0244230:CDS | 35.0% | |
| ATTCATATATCTTGTCGGGA+AGG | + | chr2_2:22422006-22422025 | Msa0244230:CDS | 35.0% | |
| GAGCATGTAAGTTACAAGAT+GGG | - | chr2_2:22422071-22422090 | None:intergenic | 35.0% | |
| AGAGCATGTAAGTTACAAGA+TGG | - | chr2_2:22422072-22422091 | None:intergenic | 35.0% | |
| !! | GTTTTTCGAAGAGTCTTATG+AGG | - | chr2_2:22422150-22422169 | None:intergenic | 35.0% |
| TTGAAAGTAAGCGAATGCTA+TGG | - | chr2_2:22422203-22422222 | None:intergenic | 35.0% | |
| TTATGTCTCTATTCGTTCCA+AGG | - | chr2_2:22422306-22422325 | None:intergenic | 35.0% | |
| !! | AAATGGGTATTGAGAGACTT+GGG | - | chr2_2:22422379-22422398 | None:intergenic | 35.0% |
| !! | AAAATGGGTATTGAGAGACT+TGG | - | chr2_2:22422380-22422399 | None:intergenic | 35.0% |
| GTTATAGTGAATCGCAACAA+TGG | + | chr2_2:22422590-22422609 | Msa0244230:intron | 35.0% | |
| AATGGTTTCCAAAATGGACA+TGG | + | chr2_2:22422608-22422627 | Msa0244230:CDS | 35.0% | |
| ATGGTTTCCAAAATGGACAT+GGG | + | chr2_2:22422609-22422628 | Msa0244230:CDS | 35.0% | |
| ! | AACATTTCCCATGTCCATTT+TGG | - | chr2_2:22422619-22422638 | None:intergenic | 35.0% |
| CTCATTAGAGGTCTATCATT+TGG | - | chr2_2:22422751-22422770 | None:intergenic | 35.0% | |
| TTCACAACAGTACTCATTAG+AGG | - | chr2_2:22422763-22422782 | None:intergenic | 35.0% | |
| TACTGTTGTGAAGATGTTAG+AGG | + | chr2_2:22422771-22422790 | Msa0244230:CDS | 35.0% | |
| ACTGTTGTGAAGATGTTAGA+GGG | + | chr2_2:22422772-22422791 | Msa0244230:CDS | 35.0% | |
| AGATTATGAAAGGGAAATGG+AGG | - | chr2_2:22422817-22422836 | None:intergenic | 35.0% | |
| TCCATTTCCCTTTCATAATC+TGG | + | chr2_2:22422816-22422835 | Msa0244230:CDS | 35.0% | |
| ACCAGATTATGAAAGGGAAA+TGG | - | chr2_2:22422820-22422839 | None:intergenic | 35.0% | |
| ACAGAATCTTCAAGAGAATC+TGG | + | chr2_2:22422910-22422929 | Msa0244230:CDS | 35.0% | |
| ATAGCGAAATTCTTCAGACA+GGG | - | chr2_2:22420710-22420729 | None:intergenic | 35.0% | |
| AATAGCGAAATTCTTCAGAC+AGG | - | chr2_2:22420711-22420730 | None:intergenic | 35.0% | |
| !!! | ATCGATTTGGATGAGTTTTG+GGG | - | chr2_2:22420795-22420814 | None:intergenic | 35.0% |
| !!! | GATCGATTTGGATGAGTTTT+GGG | - | chr2_2:22420796-22420815 | None:intergenic | 35.0% |
| GCATGAATTTACACAACCAA+AGG | + | chr2_2:22420958-22420977 | Msa0244230:intron | 35.0% | |
| GAATTTACACAACCAAAGGT+AGG | + | chr2_2:22420962-22420981 | Msa0244230:intron | 35.0% | |
| CAAAGAATGAAGTGAAAGCT+AGG | - | chr2_2:22421051-22421070 | None:intergenic | 35.0% | |
| AAGGGATTTAAGCATGGTTT+GGG | - | chr2_2:22421089-22421108 | None:intergenic | 35.0% | |
| ACTCTTTCAAGATCAACTTG+TGG | - | chr2_2:22421161-22421180 | None:intergenic | 35.0% | |
| TGATCTTGAAAGAGTTTGAG+TGG | + | chr2_2:22421166-22421185 | Msa0244230:intron | 35.0% | |
| GATCTTGAAAGAGTTTGAGT+GGG | + | chr2_2:22421167-22421186 | Msa0244230:intron | 35.0% | |
| ! | GGAGTATATAAGCATTTTCG+GGG | - | chr2_2:22421294-22421313 | None:intergenic | 35.0% |
| !! | GGGAGTATATAAGCATTTTC+GGG | - | chr2_2:22421295-22421314 | None:intergenic | 35.0% |
| TGAACTTATGTATCAGTGTC+AGG | - | chr2_2:22421361-22421380 | None:intergenic | 35.0% | |
| GTGAAGAATGTTAAGTACGA+CGG | - | chr2_2:22421414-22421433 | None:intergenic | 35.0% | |
| AGTTTACTTTAGCTGATGAG+CGG | + | chr2_2:22421483-22421502 | Msa0244230:intron | 35.0% | |
| CTTGAACCCAGTAAATGTTA+AGG | - | chr2_2:22421564-22421583 | None:intergenic | 35.0% | |
| GAATTCAGAAGCTAAGAGAA+TGG | - | chr2_2:22421979-22421998 | None:intergenic | 35.0% | |
| TCTCTTAGCTTCTGAATTCA+TGG | + | chr2_2:22421980-22421999 | Msa0244230:CDS | 35.0% | |
| CTCTTAGCTTCTGAATTCAT+GGG | + | chr2_2:22421981-22422000 | Msa0244230:CDS | 35.0% | |
| ATTCATATATCTTGTCGGGA+AGG | + | chr2_2:22422006-22422025 | Msa0244230:CDS | 35.0% | |
| GAGCATGTAAGTTACAAGAT+GGG | - | chr2_2:22422071-22422090 | None:intergenic | 35.0% | |
| AGAGCATGTAAGTTACAAGA+TGG | - | chr2_2:22422072-22422091 | None:intergenic | 35.0% | |
| !! | GTTTTTCGAAGAGTCTTATG+AGG | - | chr2_2:22422150-22422169 | None:intergenic | 35.0% |
| TTGAAAGTAAGCGAATGCTA+TGG | - | chr2_2:22422203-22422222 | None:intergenic | 35.0% | |
| TTATGTCTCTATTCGTTCCA+AGG | - | chr2_2:22422306-22422325 | None:intergenic | 35.0% | |
| !! | AAATGGGTATTGAGAGACTT+GGG | - | chr2_2:22422379-22422398 | None:intergenic | 35.0% |
| !! | AAAATGGGTATTGAGAGACT+TGG | - | chr2_2:22422380-22422399 | None:intergenic | 35.0% |
| GTTATAGTGAATCGCAACAA+TGG | + | chr2_2:22422590-22422609 | Msa0244230:intron | 35.0% | |
| AATGGTTTCCAAAATGGACA+TGG | + | chr2_2:22422608-22422627 | Msa0244230:CDS | 35.0% | |
| ATGGTTTCCAAAATGGACAT+GGG | + | chr2_2:22422609-22422628 | Msa0244230:CDS | 35.0% | |
| ! | AACATTTCCCATGTCCATTT+TGG | - | chr2_2:22422619-22422638 | None:intergenic | 35.0% |
| CTCATTAGAGGTCTATCATT+TGG | - | chr2_2:22422751-22422770 | None:intergenic | 35.0% | |
| TTCACAACAGTACTCATTAG+AGG | - | chr2_2:22422763-22422782 | None:intergenic | 35.0% | |
| TACTGTTGTGAAGATGTTAG+AGG | + | chr2_2:22422771-22422790 | Msa0244230:CDS | 35.0% | |
| ACTGTTGTGAAGATGTTAGA+GGG | + | chr2_2:22422772-22422791 | Msa0244230:CDS | 35.0% | |
| AGATTATGAAAGGGAAATGG+AGG | - | chr2_2:22422817-22422836 | None:intergenic | 35.0% | |
| TCCATTTCCCTTTCATAATC+TGG | + | chr2_2:22422816-22422835 | Msa0244230:CDS | 35.0% | |
| ACCAGATTATGAAAGGGAAA+TGG | - | chr2_2:22422820-22422839 | None:intergenic | 35.0% | |
| ACAGAATCTTCAAGAGAATC+TGG | + | chr2_2:22422910-22422929 | Msa0244230:CDS | 35.0% | |
| TGGGGTCAAAATGGCAAATT+TGG | - | chr2_2:22420777-22420796 | None:intergenic | 40.0% | |
| !!! | GATGAGTTTTGGGGTCAAAA+TGG | - | chr2_2:22420786-22420805 | None:intergenic | 40.0% |
| !!! | GGATCGATTTGGATGAGTTT+TGG | - | chr2_2:22420797-22420816 | None:intergenic | 40.0% |
| GGATGATTATGGTGCATTAC+AGG | - | chr2_2:22420818-22420837 | None:intergenic | 40.0% | |
| GAAGGGATTTAAGCATGGTT+TGG | - | chr2_2:22421090-22421109 | None:intergenic | 40.0% | |
| TGGAAGAAGGGATTTAAGCA+TGG | - | chr2_2:22421095-22421114 | None:intergenic | 40.0% | |
| GCAAGAAACAAGTGGAAGAA+GGG | - | chr2_2:22421107-22421126 | None:intergenic | 40.0% | |
| AGCAAGAAACAAGTGGAAGA+AGG | - | chr2_2:22421108-22421127 | None:intergenic | 40.0% | |
| CTTCATGAGCAAGAAACAAG+TGG | - | chr2_2:22421115-22421134 | None:intergenic | 40.0% | |
| CAACTTGTGGTAATCAAGCA+TGG | - | chr2_2:22421148-22421167 | None:intergenic | 40.0% | |
| TTGAAAGAGTTTGAGTGGGT+TGG | + | chr2_2:22421171-22421190 | Msa0244230:intron | 40.0% | |
| AACCTAGAGAGAGAAAGTGA+AGG | + | chr2_2:22421250-22421269 | Msa0244230:intron | 40.0% | |
| TTCCTTCACTTTCTCTCTCT+AGG | - | chr2_2:22421255-22421274 | None:intergenic | 40.0% | |
| !! | GTATATAAGCATTTTCGGGG+TGG | - | chr2_2:22421291-22421310 | None:intergenic | 40.0% |
| GTAAACACGACTAAGACGAA+GGG | - | chr2_2:22421339-22421358 | None:intergenic | 40.0% | |
| AGGTTCATGGAAAACGGTTA+TGG | - | chr2_2:22421436-22421455 | None:intergenic | 40.0% | |
| GGACTAAGGTTCATGGAAAA+CGG | - | chr2_2:22421442-22421461 | None:intergenic | 40.0% | |
| TATCAGAGGACTAAGGTTCA+TGG | - | chr2_2:22421449-22421468 | None:intergenic | 40.0% | |
| GTTTACTTTAGCTGATGAGC+GGG | + | chr2_2:22421484-22421503 | Msa0244230:intron | 40.0% | |
| ! | CTCAGGATTTGCCTTTTAAC+TGG | + | chr2_2:22421757-22421776 | Msa0244230:intron | 40.0% |
| AAGTAAAGGAAGTGAGAGAC+AGG | - | chr2_2:22421892-22421911 | None:intergenic | 40.0% | |
| CAAATGCAAGAGGTCTAAGT+CGG | - | chr2_2:22422102-22422121 | None:intergenic | 40.0% | |
| AACATGAGTATTCGGATCCT+TGG | + | chr2_2:22422286-22422305 | Msa0244230:intron | 40.0% | |
| CGCAACAATGGTTTCCAAAA+TGG | + | chr2_2:22422602-22422621 | Msa0244230:CDS | 40.0% | |
| GTTGTTATGCTTGCACTTTG+TGG | + | chr2_2:22422655-22422674 | Msa0244230:CDS | 40.0% | |
| GATAGCAGAGAGAATGTTGA+AGG | + | chr2_2:22422699-22422718 | Msa0244230:CDS | 40.0% | |
| GAATGTTGAAGGTTGCTCTA+TGG | + | chr2_2:22422710-22422729 | Msa0244230:CDS | 40.0% | |
| GCAGGAACCAGATTATGAAA+GGG | - | chr2_2:22422826-22422845 | None:intergenic | 40.0% | |
| AGCAGGAACCAGATTATGAA+AGG | - | chr2_2:22422827-22422846 | None:intergenic | 40.0% | |
| CTGATACGACTACATCATCA+TGG | + | chr2_2:22422884-22422903 | Msa0244230:CDS | 40.0% | |
| TGGGGTCAAAATGGCAAATT+TGG | - | chr2_2:22420777-22420796 | None:intergenic | 40.0% | |
| !!! | GATGAGTTTTGGGGTCAAAA+TGG | - | chr2_2:22420786-22420805 | None:intergenic | 40.0% |
| !!! | GGATCGATTTGGATGAGTTT+TGG | - | chr2_2:22420797-22420816 | None:intergenic | 40.0% |
| GGATGATTATGGTGCATTAC+AGG | - | chr2_2:22420818-22420837 | None:intergenic | 40.0% | |
| GAAGGGATTTAAGCATGGTT+TGG | - | chr2_2:22421090-22421109 | None:intergenic | 40.0% | |
| TGGAAGAAGGGATTTAAGCA+TGG | - | chr2_2:22421095-22421114 | None:intergenic | 40.0% | |
| GCAAGAAACAAGTGGAAGAA+GGG | - | chr2_2:22421107-22421126 | None:intergenic | 40.0% | |
| AGCAAGAAACAAGTGGAAGA+AGG | - | chr2_2:22421108-22421127 | None:intergenic | 40.0% | |
| CTTCATGAGCAAGAAACAAG+TGG | - | chr2_2:22421115-22421134 | None:intergenic | 40.0% | |
| CAACTTGTGGTAATCAAGCA+TGG | - | chr2_2:22421148-22421167 | None:intergenic | 40.0% | |
| TTGAAAGAGTTTGAGTGGGT+TGG | + | chr2_2:22421171-22421190 | Msa0244230:intron | 40.0% | |
| AACCTAGAGAGAGAAAGTGA+AGG | + | chr2_2:22421250-22421269 | Msa0244230:intron | 40.0% | |
| TTCCTTCACTTTCTCTCTCT+AGG | - | chr2_2:22421255-22421274 | None:intergenic | 40.0% | |
| !! | GTATATAAGCATTTTCGGGG+TGG | - | chr2_2:22421291-22421310 | None:intergenic | 40.0% |
| GTAAACACGACTAAGACGAA+GGG | - | chr2_2:22421339-22421358 | None:intergenic | 40.0% | |
| AGGTTCATGGAAAACGGTTA+TGG | - | chr2_2:22421436-22421455 | None:intergenic | 40.0% | |
| GGACTAAGGTTCATGGAAAA+CGG | - | chr2_2:22421442-22421461 | None:intergenic | 40.0% | |
| TATCAGAGGACTAAGGTTCA+TGG | - | chr2_2:22421449-22421468 | None:intergenic | 40.0% | |
| GTTTACTTTAGCTGATGAGC+GGG | + | chr2_2:22421484-22421503 | Msa0244230:intron | 40.0% | |
| ! | CTCAGGATTTGCCTTTTAAC+TGG | + | chr2_2:22421757-22421776 | Msa0244230:intron | 40.0% |
| AAGTAAAGGAAGTGAGAGAC+AGG | - | chr2_2:22421892-22421911 | None:intergenic | 40.0% | |
| CAAATGCAAGAGGTCTAAGT+CGG | - | chr2_2:22422102-22422121 | None:intergenic | 40.0% | |
| AACATGAGTATTCGGATCCT+TGG | + | chr2_2:22422286-22422305 | Msa0244230:intron | 40.0% | |
| CGCAACAATGGTTTCCAAAA+TGG | + | chr2_2:22422602-22422621 | Msa0244230:CDS | 40.0% | |
| GTTGTTATGCTTGCACTTTG+TGG | + | chr2_2:22422655-22422674 | Msa0244230:CDS | 40.0% | |
| GATAGCAGAGAGAATGTTGA+AGG | + | chr2_2:22422699-22422718 | Msa0244230:CDS | 40.0% | |
| GAATGTTGAAGGTTGCTCTA+TGG | + | chr2_2:22422710-22422729 | Msa0244230:CDS | 40.0% | |
| GCAGGAACCAGATTATGAAA+GGG | - | chr2_2:22422826-22422845 | None:intergenic | 40.0% | |
| AGCAGGAACCAGATTATGAA+AGG | - | chr2_2:22422827-22422846 | None:intergenic | 40.0% | |
| CTGATACGACTACATCATCA+TGG | + | chr2_2:22422884-22422903 | Msa0244230:CDS | 40.0% | |
| ATTAGCGTAGCCTTCTGGAT+GGG | - | chr2_2:22420669-22420688 | None:intergenic | 45.0% | |
| TATTAGCGTAGCCTTCTGGA+TGG | - | chr2_2:22420670-22420689 | None:intergenic | 45.0% | |
| TCGCTAATAGCGCAGTTCTT+CGG | + | chr2_2:22420741-22420760 | Msa0244230:CDS | 45.0% | |
| GGTGCATTACAGGATCGATT+TGG | - | chr2_2:22420808-22420827 | None:intergenic | 45.0% | |
| TCTCTCTTCCTTCTCTCTAG+AGG | - | chr2_2:22421215-22421234 | None:intergenic | 45.0% | |
| GGTAAACACGACTAAGACGA+AGG | - | chr2_2:22421340-22421359 | None:intergenic | 45.0% | |
| !! | CCTTTTAACTGGAGTCCTAC+CGG | + | chr2_2:22421768-22421787 | Msa0244230:CDS | 45.0% |
| AGTGAGAGACAGGTGTATCA+AGG | - | chr2_2:22421882-22421901 | None:intergenic | 45.0% | |
| ATTAGCGTAGCCTTCTGGAT+GGG | - | chr2_2:22420669-22420688 | None:intergenic | 45.0% | |
| TATTAGCGTAGCCTTCTGGA+TGG | - | chr2_2:22420670-22420689 | None:intergenic | 45.0% | |
| TCGCTAATAGCGCAGTTCTT+CGG | + | chr2_2:22420741-22420760 | Msa0244230:CDS | 45.0% | |
| GGTGCATTACAGGATCGATT+TGG | - | chr2_2:22420808-22420827 | None:intergenic | 45.0% | |
| TCTCTCTTCCTTCTCTCTAG+AGG | - | chr2_2:22421215-22421234 | None:intergenic | 45.0% | |
| GGTAAACACGACTAAGACGA+AGG | - | chr2_2:22421340-22421359 | None:intergenic | 45.0% | |
| !! | CCTTTTAACTGGAGTCCTAC+CGG | + | chr2_2:22421768-22421787 | Msa0244230:CDS | 45.0% |
| AGTGAGAGACAGGTGTATCA+AGG | - | chr2_2:22421882-22421901 | None:intergenic | 45.0% | |
| ! | CCAACATGCTTTTGGCCTGT+TGG | - | chr2_2:22420646-22420665 | None:intergenic | 50.0% |
| ! | CCAACAGGCCAAAAGCATGT+TGG | + | chr2_2:22420643-22420662 | Msa0244230:CDS | 50.0% |
| ! | TGGATGGGCCAACATGCTTT+TGG | - | chr2_2:22420654-22420673 | None:intergenic | 50.0% |
| CGCTAATAGCGCAGTTCTTC+GGG | + | chr2_2:22420742-22420761 | Msa0244230:CDS | 50.0% | |
| !! | GAGTTTGAGTGGGTTGGAAG+AGG | + | chr2_2:22421177-22421196 | Msa0244230:intron | 50.0% |
| CCGGTAGGACTCCAGTTAAA+AGG | - | chr2_2:22421771-22421790 | None:intergenic | 50.0% | |
| ! | TGTTGCAAGCAAGCACTGCA+GGG | - | chr2_2:22421806-22421825 | None:intergenic | 50.0% |
| ! | ATGTTGCAAGCAAGCACTGC+AGG | - | chr2_2:22421807-22421826 | None:intergenic | 50.0% |
| ! | CCAACATGCTTTTGGCCTGT+TGG | - | chr2_2:22420646-22420665 | None:intergenic | 50.0% |
| ! | CCAACAGGCCAAAAGCATGT+TGG | + | chr2_2:22420643-22420662 | Msa0244230:CDS | 50.0% |
| ! | TGGATGGGCCAACATGCTTT+TGG | - | chr2_2:22420654-22420673 | None:intergenic | 50.0% |
| CGCTAATAGCGCAGTTCTTC+GGG | + | chr2_2:22420742-22420761 | Msa0244230:CDS | 50.0% | |
| !! | GAGTTTGAGTGGGTTGGAAG+AGG | + | chr2_2:22421177-22421196 | Msa0244230:intron | 50.0% |
| CCGGTAGGACTCCAGTTAAA+AGG | - | chr2_2:22421771-22421790 | None:intergenic | 50.0% | |
| ! | TGTTGCAAGCAAGCACTGCA+GGG | - | chr2_2:22421806-22421825 | None:intergenic | 50.0% |
| ! | ATGTTGCAAGCAAGCACTGC+AGG | - | chr2_2:22421807-22421826 | None:intergenic | 50.0% |
| AGCATGTTGGCCCATCCAGA+AGG | + | chr2_2:22420656-22420675 | Msa0244230:CDS | 55.0% | |
| GCGCTATTAGCGTAGCCTTC+TGG | - | chr2_2:22420674-22420693 | None:intergenic | 55.0% | |
| GCTACGCTAATAGCGCACCT+GGG | + | chr2_2:22420678-22420697 | Msa0244230:CDS | 55.0% | |
| CTACGCTAATAGCGCACCTG+GGG | + | chr2_2:22420679-22420698 | Msa0244230:CDS | 55.0% | |
| !! | AGTGGGTTGGAAGAGGAGAG+AGG | + | chr2_2:22421184-22421203 | Msa0244230:intron | 55.0% |
| !! | GTGGGTTGGAAGAGGAGAGA+GGG | + | chr2_2:22421185-22421204 | Msa0244230:intron | 55.0% |
| ! | TGGGTTGGAAGAGGAGAGAG+GGG | + | chr2_2:22421186-22421205 | Msa0244230:intron | 55.0% |
| TGCAGGGCAAACCTGGTTTC+CGG | - | chr2_2:22421790-22421809 | None:intergenic | 55.0% | |
| AGCATGTTGGCCCATCCAGA+AGG | + | chr2_2:22420656-22420675 | Msa0244230:CDS | 55.0% | |
| GCGCTATTAGCGTAGCCTTC+TGG | - | chr2_2:22420674-22420693 | None:intergenic | 55.0% | |
| GCTACGCTAATAGCGCACCT+GGG | + | chr2_2:22420678-22420697 | Msa0244230:CDS | 55.0% | |
| CTACGCTAATAGCGCACCTG+GGG | + | chr2_2:22420679-22420698 | Msa0244230:CDS | 55.0% | |
| !! | AGTGGGTTGGAAGAGGAGAG+AGG | + | chr2_2:22421184-22421203 | Msa0244230:intron | 55.0% |
| !! | GTGGGTTGGAAGAGGAGAGA+GGG | + | chr2_2:22421185-22421204 | Msa0244230:intron | 55.0% |
| ! | TGGGTTGGAAGAGGAGAGAG+GGG | + | chr2_2:22421186-22421205 | Msa0244230:intron | 55.0% |
| TGCAGGGCAAACCTGGTTTC+CGG | - | chr2_2:22421790-22421809 | None:intergenic | 55.0% | |
| GGCTACGCTAATAGCGCACC+TGG | + | chr2_2:22420677-22420696 | Msa0244230:CDS | 60.0% | |
| AGCGCAGTTCTTCGGGTCTG+TGG | + | chr2_2:22420749-22420768 | Msa0244230:CDS | 60.0% | |
| GTTGGAAGAGGAGAGAGGGG+CGG | + | chr2_2:22421189-22421208 | Msa0244230:intron | 60.0% | |
| CTGGAGTCCTACCGGAAACC+AGG | + | chr2_2:22421776-22421795 | Msa0244230:CDS | 60.0% | |
| GGGCAAACCTGGTTTCCGGT+AGG | - | chr2_2:22421786-22421805 | None:intergenic | 60.0% | |
| ! | CAAGCACTGCAGGGCAAACC+TGG | - | chr2_2:22421797-22421816 | None:intergenic | 60.0% |
| GGCTACGCTAATAGCGCACC+TGG | + | chr2_2:22420677-22420696 | Msa0244230:CDS | 60.0% | |
| AGCGCAGTTCTTCGGGTCTG+TGG | + | chr2_2:22420749-22420768 | Msa0244230:CDS | 60.0% | |
| GTTGGAAGAGGAGAGAGGGG+CGG | + | chr2_2:22421189-22421208 | Msa0244230:intron | 60.0% | |
| CTGGAGTCCTACCGGAAACC+AGG | + | chr2_2:22421776-22421795 | Msa0244230:CDS | 60.0% | |
| GGGCAAACCTGGTTTCCGGT+AGG | - | chr2_2:22421786-22421805 | None:intergenic | 60.0% | |
| ! | CAAGCACTGCAGGGCAAACC+TGG | - | chr2_2:22421797-22421816 | None:intergenic | 60.0% |
| CTAATAGCGCACCTGGGGCG+TGG | + | chr2_2:22420684-22420703 | Msa0244230:CDS | 65.0% | |
| ! | AGGGGCGGCCTCTAGAGAGA+AGG | + | chr2_2:22421204-22421223 | Msa0244230:intron | 65.0% |
| CTAATAGCGCACCTGGGGCG+TGG | + | chr2_2:22420684-22420703 | Msa0244230:CDS | 65.0% | |
| ! | AGGGGCGGCCTCTAGAGAGA+AGG | + | chr2_2:22421204-22421223 | Msa0244230:intron | 65.0% |
| TTCAGACAGGGCCACGCCCC+AGG | - | chr2_2:22420698-22420717 | None:intergenic | 70.0% | |
| TTCAGACAGGGCCACGCCCC+AGG | - | chr2_2:22420698-22420717 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 22420638 | 22422978 | 22420638 | ID=Msa0244230;Name=Msa0244230 |
| chr2_2 | mRNA | 22420638 | 22422978 | 22420638 | ID=Msa0244230-mRNA-1;Parent=Msa0244230;Name=Msa0244230-mRNA-1;_AED=0.62;_eAED=0.62;_QI=0|0|0|0.25|1|1|4|0|243 |
| chr2_2 | exon | 22420638 | 22420817 | 22420638 | ID=Msa0244230-mRNA-1:exon:8631;Parent=Msa0244230-mRNA-1 |
| chr2_2 | exon | 22421762 | 22421797 | 22421762 | ID=Msa0244230-mRNA-1:exon:8632;Parent=Msa0244230-mRNA-1 |
| chr2_2 | exon | 22421948 | 22422075 | 22421948 | ID=Msa0244230-mRNA-1:exon:8633;Parent=Msa0244230-mRNA-1 |
| chr2_2 | exon | 22422591 | 22422978 | 22422591 | ID=Msa0244230-mRNA-1:exon:8634;Parent=Msa0244230-mRNA-1 |
| chr2_2 | CDS | 22420638 | 22420817 | 22420638 | ID=Msa0244230-mRNA-1:cds;Parent=Msa0244230-mRNA-1 |
| chr2_2 | CDS | 22421762 | 22421797 | 22421762 | ID=Msa0244230-mRNA-1:cds;Parent=Msa0244230-mRNA-1 |
| chr2_2 | CDS | 22421948 | 22422075 | 22421948 | ID=Msa0244230-mRNA-1:cds;Parent=Msa0244230-mRNA-1 |
| chr2_2 | CDS | 22422591 | 22422978 | 22422591 | ID=Msa0244230-mRNA-1:cds;Parent=Msa0244230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
