AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0347750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347750 MtrunA17_Chr3g0080131 98.201 278 5 0 1 278 1 278 0.0 566
Msa0347750 MtrunA17_Chr3g0126921 26.374 273 143 8 8 277 13 230 1.60e-20 87.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0347750 AT4G10170.1 54.122 279 101 5 1 278 1 253 1.21e-93 277
Msa0347750 AT4G10170.2 54.122 279 101 5 1 278 1 253 1.21e-93 277
Msa0347750 AT1G33475.1 44.326 282 125 7 1 278 1 254 4.25e-71 219
Msa0347750 AT1G33475.2 44.954 109 48 2 171 278 55 152 1.01e-23 94.4
Msa0347750 AT1G33475.2 57.143 56 22 1 1 54 1 56 2.28e-16 74.7
Msa0347750 AT4G27840.1 25.175 286 177 7 1 277 1 258 4.85e-19 84.7
Msa0347750 AT5G52990.1 24.823 282 179 9 10 278 10 271 1.45e-15 75.1

Find 60 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCTTTGCAAAAGGATA+TGG 0.148205 3_1:-8982421 Msa0347750:CDS
AAGGCCTGATTCAGGAAATT+TGG 0.252155 3_1:-8982475 Msa0347750:CDS
TTCAACCAAAGCCCCTTTAT+TGG 0.253713 3_1:-8982598 Msa0347750:CDS
TTTCACATAGTGGTAGTAAT+TGG 0.275380 3_1:-8982701 Msa0347750:CDS
AATGAGAGATGTTGAGTTAG+AGG 0.307965 3_1:-8982526 Msa0347750:CDS
TCAACCAAAGCCCCTTTATT+GGG 0.328565 3_1:-8982597 Msa0347750:CDS
GTATAATATTATTTGTCATC+TGG 0.366131 3_1:-8982308 Msa0347750:CDS
GACGAAACTTCCTCGACATT+TGG 0.372647 3_1:-8982675 Msa0347750:CDS
ATTTCGAGACAATAGGTAAA+AGG 0.375196 3_1:-8982944 Msa0347750:CDS
CCGTCCAAATTTCCTGAATC+AGG 0.383998 3_1:+8982471 None:intergenic
AGTTTACGTTCAAGAGAAAC+TGG 0.388560 3_1:-8982763 Msa0347750:CDS
AGAGGATCAAGGCCTGATTC+AGG 0.392539 3_1:-8982483 Msa0347750:CDS
ACGTAAACTGAATTCATGTT+TGG 0.402139 3_1:+8982777 None:intergenic
ATTTGTCCATTCAAATTACT+TGG 0.402162 3_1:+8982633 None:intergenic
TACATCTTCTTCTTTGCAAA+AGG 0.409637 3_1:-8982427 Msa0347750:CDS
AGATGAAGGTCTTGGTAACT+TGG 0.412330 3_1:-8982874 Msa0347750:CDS
TCTTCTTTGCAAAAGGATAT+GGG 0.415200 3_1:-8982420 Msa0347750:CDS
TAGCTAGAACAATGCGTACT+TGG 0.417134 3_1:+8982346 None:intergenic
CTCAAAACGTCCGTAAGAAA+TGG 0.447780 3_1:-8982374 Msa0347750:CDS
TACTTCACAATTGTAGATGA+AGG 0.455781 3_1:-8982888 Msa0347750:CDS
CATTACTGTTGTGTTTCTAA+AGG 0.456727 3_1:-8983062 Msa0347750:CDS
CCATTCAAATTACTTGGTGA+TGG 0.462379 3_1:+8982639 None:intergenic
CACAGCCTTGTGCTTGGAGG+CGG 0.462743 3_1:-8982988 Msa0347750:CDS
ACAATTGTAGATGAAGGTCT+TGG 0.466801 3_1:-8982882 Msa0347750:CDS
ACAATAGGTAAAAGGACTTA+CGG 0.467377 3_1:-8982936 Msa0347750:CDS
CTTGGCGCCACCATTTCTTA+CGG 0.469508 3_1:+8982364 None:intergenic
CAATAGGTAAAAGGACTTAC+GGG 0.479243 3_1:-8982935 Msa0347750:CDS
TTAGAGAATGTTTCACATAG+TGG 0.480167 3_1:-8982711 Msa0347750:CDS
AGGCGGTTCCTTCTTTCCAC+AGG 0.481926 3_1:-8982971 Msa0347750:CDS
CACATCTTGTATGCGTATAG+TGG 0.484986 3_1:-8983035 Msa0347750:CDS
AAATTACTTGGTGATGGAGA+TGG 0.492575 3_1:+8982645 None:intergenic
TTCAGAAAGGTAGCTAGAAA+AGG 0.498079 3_1:-8982816 Msa0347750:CDS
AGGTGGTATTTCGAGACAAT+AGG 0.503747 3_1:-8982951 Msa0347750:CDS
GGTTCAATGAGGACGAGATC+AGG 0.506463 3_1:-8982399 Msa0347750:CDS
AGGTAGCTAGAAAAGGTTCA+AGG 0.518283 3_1:-8982809 Msa0347750:CDS
CGGTTCCTTCTTTCCACAGG+TGG 0.523709 3_1:-8982968 Msa0347750:CDS
CCATCACCAAGTAATTTGAA+TGG 0.529421 3_1:-8982639 Msa0347750:CDS
AAATACCACCTGTGGAAAGA+AGG 0.529530 3_1:+8982963 None:intergenic
GTGATCAGATTACGAATGAC+AGG 0.539134 3_1:+8982738 None:intergenic
ACTTCCTCGACATTTGGCAT+TGG 0.540398 3_1:-8982669 Msa0347750:CDS
GCAAGAGAAGAAGAAAGTAA+AGG 0.545957 3_1:-8982562 Msa0347750:CDS
TGTCACAGCCTTGTGCTTGG+AGG 0.553859 3_1:-8982991 Msa0347750:CDS
GAATGTCACAGCCTTGTGCT+TGG 0.555477 3_1:-8982994 Msa0347750:CDS
AATCTACAGATAGAGGATCA+AGG 0.570567 3_1:-8982494 Msa0347750:CDS
GGTAGCTAGAAAAGGTTCAA+GGG 0.580926 3_1:-8982808 Msa0347750:CDS
ATCTTGTATGCGTATAGTGG+TGG 0.589645 3_1:-8983032 Msa0347750:CDS
AAAACGTCCGTAAGAAATGG+TGG 0.598377 3_1:-8982371 Msa0347750:CDS
CACTATACGCATACAAGATG+TGG 0.605232 3_1:+8983036 None:intergenic
TTGTCTCGAAATACCACCTG+TGG 0.605879 3_1:+8982955 None:intergenic
AGGAACCGCCTCCAAGCACA+AGG 0.610638 3_1:+8982983 None:intergenic
GTAGCTAGAAAAGGTTCAAG+GGG 0.613162 3_1:-8982807 Msa0347750:CDS
AAGATGTAGCAGCACCACCT+TGG 0.620183 3_1:+8982442 None:intergenic
AATTTGGACGGTATTAGCCA+AGG 0.623716 3_1:-8982459 Msa0347750:CDS
TGTCAGAGATGAATTCAGAA+AGG 0.624051 3_1:-8982829 Msa0347750:CDS
CCTGATTCAGGAAATTTGGA+CGG 0.627032 3_1:-8982471 Msa0347750:CDS
ATCGAATGCATGATATACCA+CGG 0.650850 3_1:+8982274 None:intergenic
ATCTGGTTAGTAATATGCCG+TGG 0.655337 3_1:-8982291 Msa0347750:CDS
TGGACCAATGCCAAATGTCG+AGG 0.656618 3_1:+8982665 None:intergenic
TTGGACGGTATTAGCCAAGG+TGG 0.682644 3_1:-8982456 Msa0347750:CDS
AAAAGGATATGGGTTCAATG+AGG 0.721400 3_1:-8982410 Msa0347750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTATAATATTATTTGTCATC+TGG - chr3_1:8983050-8983069 Msa0347750:CDS 20.0%
!! GTATAATATTATTTGTCATC+TGG - chr3_1:8983050-8983069 Msa0347750:CDS 20.0%
! ATTTGTCCATTCAAATTACT+TGG + chr3_1:8982728-8982747 None:intergenic 25.0%
! CATAAAAAATCTACAGATAG+AGG - chr3_1:8982857-8982876 Msa0347750:CDS 25.0%
! ATTTGTCCATTCAAATTACT+TGG + chr3_1:8982728-8982747 None:intergenic 25.0%
! CATAAAAAATCTACAGATAG+AGG - chr3_1:8982857-8982876 Msa0347750:CDS 25.0%
! CATTACTGTTGTGTTTCTAA+AGG - chr3_1:8982296-8982315 Msa0347750:CDS 30.0%
ATTTCGAGACAATAGGTAAA+AGG - chr3_1:8982414-8982433 Msa0347750:CDS 30.0%
ACAATAGGTAAAAGGACTTA+CGG - chr3_1:8982422-8982441 Msa0347750:CDS 30.0%
TACTTCACAATTGTAGATGA+AGG - chr3_1:8982470-8982489 Msa0347750:CDS 30.0%
ACGTAAACTGAATTCATGTT+TGG + chr3_1:8982584-8982603 None:intergenic 30.0%
TTAGAGAATGTTTCACATAG+TGG - chr3_1:8982647-8982666 Msa0347750:CDS 30.0%
TTTCACATAGTGGTAGTAAT+TGG - chr3_1:8982657-8982676 Msa0347750:CDS 30.0%
! TGCTAGATTTTCCCAATAAA+GGG + chr3_1:8982775-8982794 None:intergenic 30.0%
! TTGCTAGATTTTCCCAATAA+AGG + chr3_1:8982776-8982795 None:intergenic 30.0%
TACATCTTCTTCTTTGCAAA+AGG - chr3_1:8982931-8982950 Msa0347750:CDS 30.0%
TTCTTCTTTGCAAAAGGATA+TGG - chr3_1:8982937-8982956 Msa0347750:CDS 30.0%
TCTTCTTTGCAAAAGGATAT+GGG - chr3_1:8982938-8982957 Msa0347750:CDS 30.0%
! CATTACTGTTGTGTTTCTAA+AGG - chr3_1:8982296-8982315 Msa0347750:CDS 30.0%
ATTTCGAGACAATAGGTAAA+AGG - chr3_1:8982414-8982433 Msa0347750:CDS 30.0%
ACAATAGGTAAAAGGACTTA+CGG - chr3_1:8982422-8982441 Msa0347750:CDS 30.0%
TACTTCACAATTGTAGATGA+AGG - chr3_1:8982470-8982489 Msa0347750:CDS 30.0%
ACGTAAACTGAATTCATGTT+TGG + chr3_1:8982584-8982603 None:intergenic 30.0%
TTAGAGAATGTTTCACATAG+TGG - chr3_1:8982647-8982666 Msa0347750:CDS 30.0%
TTTCACATAGTGGTAGTAAT+TGG - chr3_1:8982657-8982676 Msa0347750:CDS 30.0%
! TGCTAGATTTTCCCAATAAA+GGG + chr3_1:8982775-8982794 None:intergenic 30.0%
! TTGCTAGATTTTCCCAATAA+AGG + chr3_1:8982776-8982795 None:intergenic 30.0%
TACATCTTCTTCTTTGCAAA+AGG - chr3_1:8982931-8982950 Msa0347750:CDS 30.0%
TTCTTCTTTGCAAAAGGATA+TGG - chr3_1:8982937-8982956 Msa0347750:CDS 30.0%
TCTTCTTTGCAAAAGGATAT+GGG - chr3_1:8982938-8982957 Msa0347750:CDS 30.0%
CAATAGGTAAAAGGACTTAC+GGG - chr3_1:8982423-8982442 Msa0347750:CDS 35.0%
ACAATTGTAGATGAAGGTCT+TGG - chr3_1:8982476-8982495 Msa0347750:CDS 35.0%
!! CTTGGTAGTTCTTCAGTTTT+TGG - chr3_1:8982502-8982521 Msa0347750:CDS 35.0%
TGTCAGAGATGAATTCAGAA+AGG - chr3_1:8982529-8982548 Msa0347750:CDS 35.0%
TTCAGAAAGGTAGCTAGAAA+AGG - chr3_1:8982542-8982561 Msa0347750:CDS 35.0%
AGTTTACGTTCAAGAGAAAC+TGG - chr3_1:8982595-8982614 Msa0347750:CDS 35.0%
!! AAATTACTTGGTGATGGAGA+TGG + chr3_1:8982716-8982735 None:intergenic 35.0%
! CCATTCAAATTACTTGGTGA+TGG + chr3_1:8982722-8982741 None:intergenic 35.0%
CCATCACCAAGTAATTTGAA+TGG - chr3_1:8982719-8982738 Msa0347750:CDS 35.0%
! GCTAGATTTTCCCAATAAAG+GGG + chr3_1:8982774-8982793 None:intergenic 35.0%
GCAAGAGAAGAAGAAAGTAA+AGG - chr3_1:8982796-8982815 Msa0347750:CDS 35.0%
AATGAGAGATGTTGAGTTAG+AGG - chr3_1:8982832-8982851 Msa0347750:CDS 35.0%
AATCTACAGATAGAGGATCA+AGG - chr3_1:8982864-8982883 Msa0347750:CDS 35.0%
AAAAGGATATGGGTTCAATG+AGG - chr3_1:8982948-8982967 Msa0347750:CDS 35.0%
! ATTTCTTACGGACGTTTTGA+GGG + chr3_1:8982985-8983004 None:intergenic 35.0%
ATCGAATGCATGATATACCA+CGG + chr3_1:8983087-8983106 None:intergenic 35.0%
CAATAGGTAAAAGGACTTAC+GGG - chr3_1:8982423-8982442 Msa0347750:CDS 35.0%
ACAATTGTAGATGAAGGTCT+TGG - chr3_1:8982476-8982495 Msa0347750:CDS 35.0%
!! CTTGGTAGTTCTTCAGTTTT+TGG - chr3_1:8982502-8982521 Msa0347750:CDS 35.0%
TGTCAGAGATGAATTCAGAA+AGG - chr3_1:8982529-8982548 Msa0347750:CDS 35.0%
TTCAGAAAGGTAGCTAGAAA+AGG - chr3_1:8982542-8982561 Msa0347750:CDS 35.0%
AGTTTACGTTCAAGAGAAAC+TGG - chr3_1:8982595-8982614 Msa0347750:CDS 35.0%
!! AAATTACTTGGTGATGGAGA+TGG + chr3_1:8982716-8982735 None:intergenic 35.0%
! CCATTCAAATTACTTGGTGA+TGG + chr3_1:8982722-8982741 None:intergenic 35.0%
CCATCACCAAGTAATTTGAA+TGG - chr3_1:8982719-8982738 Msa0347750:CDS 35.0%
! GCTAGATTTTCCCAATAAAG+GGG + chr3_1:8982774-8982793 None:intergenic 35.0%
GCAAGAGAAGAAGAAAGTAA+AGG - chr3_1:8982796-8982815 Msa0347750:CDS 35.0%
AATGAGAGATGTTGAGTTAG+AGG - chr3_1:8982832-8982851 Msa0347750:CDS 35.0%
AATCTACAGATAGAGGATCA+AGG - chr3_1:8982864-8982883 Msa0347750:CDS 35.0%
AAAAGGATATGGGTTCAATG+AGG - chr3_1:8982948-8982967 Msa0347750:CDS 35.0%
! ATTTCTTACGGACGTTTTGA+GGG + chr3_1:8982985-8983004 None:intergenic 35.0%
ATCGAATGCATGATATACCA+CGG + chr3_1:8983087-8983106 None:intergenic 35.0%
CACTATACGCATACAAGATG+TGG + chr3_1:8982325-8982344 None:intergenic 40.0%
CACATCTTGTATGCGTATAG+TGG - chr3_1:8982323-8982342 Msa0347750:CDS 40.0%
ATCTTGTATGCGTATAGTGG+TGG - chr3_1:8982326-8982345 Msa0347750:CDS 40.0%
AAATACCACCTGTGGAAAGA+AGG + chr3_1:8982398-8982417 None:intergenic 40.0%
AGGTGGTATTTCGAGACAAT+AGG - chr3_1:8982407-8982426 Msa0347750:CDS 40.0%
!! AAGGACTTACGGGTTTTTAG+TGG - chr3_1:8982433-8982452 Msa0347750:CDS 40.0%
!!! TACGGGTTTTTAGTGGAAGA+TGG - chr3_1:8982440-8982459 Msa0347750:CDS 40.0%
! AGATGAAGGTCTTGGTAACT+TGG - chr3_1:8982484-8982503 Msa0347750:CDS 40.0%
AGGTAGCTAGAAAAGGTTCA+AGG - chr3_1:8982549-8982568 Msa0347750:CDS 40.0%
GGTAGCTAGAAAAGGTTCAA+GGG - chr3_1:8982550-8982569 Msa0347750:CDS 40.0%
GTAGCTAGAAAAGGTTCAAG+GGG - chr3_1:8982551-8982570 Msa0347750:CDS 40.0%
GTGATCAGATTACGAATGAC+AGG + chr3_1:8982623-8982642 None:intergenic 40.0%
TTCAACCAAAGCCCCTTTAT+TGG - chr3_1:8982760-8982779 Msa0347750:CDS 40.0%
TCAACCAAAGCCCCTTTATT+GGG - chr3_1:8982761-8982780 Msa0347750:CDS 40.0%
! TTTTCCCAATAAAGGGGCTT+TGG + chr3_1:8982768-8982787 None:intergenic 40.0%
AAGGCCTGATTCAGGAAATT+TGG - chr3_1:8982883-8982902 Msa0347750:CDS 40.0%
CCTGATTCAGGAAATTTGGA+CGG - chr3_1:8982887-8982906 Msa0347750:CDS 40.0%
AATTTGGACGGTATTAGCCA+AGG - chr3_1:8982899-8982918 Msa0347750:CDS 40.0%
! CATTTCTTACGGACGTTTTG+AGG + chr3_1:8982986-8983005 None:intergenic 40.0%
CTCAAAACGTCCGTAAGAAA+TGG - chr3_1:8982984-8983003 Msa0347750:CDS 40.0%
AAAACGTCCGTAAGAAATGG+TGG - chr3_1:8982987-8983006 Msa0347750:CDS 40.0%
TAGCTAGAACAATGCGTACT+TGG + chr3_1:8983015-8983034 None:intergenic 40.0%
ATCTGGTTAGTAATATGCCG+TGG - chr3_1:8983067-8983086 Msa0347750:CDS 40.0%
CACTATACGCATACAAGATG+TGG + chr3_1:8982325-8982344 None:intergenic 40.0%
CACATCTTGTATGCGTATAG+TGG - chr3_1:8982323-8982342 Msa0347750:CDS 40.0%
ATCTTGTATGCGTATAGTGG+TGG - chr3_1:8982326-8982345 Msa0347750:CDS 40.0%
AAATACCACCTGTGGAAAGA+AGG + chr3_1:8982398-8982417 None:intergenic 40.0%
AGGTGGTATTTCGAGACAAT+AGG - chr3_1:8982407-8982426 Msa0347750:CDS 40.0%
!! AAGGACTTACGGGTTTTTAG+TGG - chr3_1:8982433-8982452 Msa0347750:CDS 40.0%
!!! TACGGGTTTTTAGTGGAAGA+TGG - chr3_1:8982440-8982459 Msa0347750:CDS 40.0%
! AGATGAAGGTCTTGGTAACT+TGG - chr3_1:8982484-8982503 Msa0347750:CDS 40.0%
AGGTAGCTAGAAAAGGTTCA+AGG - chr3_1:8982549-8982568 Msa0347750:CDS 40.0%
GGTAGCTAGAAAAGGTTCAA+GGG - chr3_1:8982550-8982569 Msa0347750:CDS 40.0%
GTAGCTAGAAAAGGTTCAAG+GGG - chr3_1:8982551-8982570 Msa0347750:CDS 40.0%
GTGATCAGATTACGAATGAC+AGG + chr3_1:8982623-8982642 None:intergenic 40.0%
TTCAACCAAAGCCCCTTTAT+TGG - chr3_1:8982760-8982779 Msa0347750:CDS 40.0%
TCAACCAAAGCCCCTTTATT+GGG - chr3_1:8982761-8982780 Msa0347750:CDS 40.0%
! TTTTCCCAATAAAGGGGCTT+TGG + chr3_1:8982768-8982787 None:intergenic 40.0%
AAGGCCTGATTCAGGAAATT+TGG - chr3_1:8982883-8982902 Msa0347750:CDS 40.0%
CCTGATTCAGGAAATTTGGA+CGG - chr3_1:8982887-8982906 Msa0347750:CDS 40.0%
AATTTGGACGGTATTAGCCA+AGG - chr3_1:8982899-8982918 Msa0347750:CDS 40.0%
! CATTTCTTACGGACGTTTTG+AGG + chr3_1:8982986-8983005 None:intergenic 40.0%
CTCAAAACGTCCGTAAGAAA+TGG - chr3_1:8982984-8983003 Msa0347750:CDS 40.0%
AAAACGTCCGTAAGAAATGG+TGG - chr3_1:8982987-8983006 Msa0347750:CDS 40.0%
TAGCTAGAACAATGCGTACT+TGG + chr3_1:8983015-8983034 None:intergenic 40.0%
ATCTGGTTAGTAATATGCCG+TGG - chr3_1:8983067-8983086 Msa0347750:CDS 40.0%
TTGTCTCGAAATACCACCTG+TGG + chr3_1:8982406-8982425 None:intergenic 45.0%
GACGAAACTTCCTCGACATT+TGG - chr3_1:8982683-8982702 Msa0347750:CDS 45.0%
ACTTCCTCGACATTTGGCAT+TGG - chr3_1:8982689-8982708 Msa0347750:CDS 45.0%
CCGTCCAAATTTCCTGAATC+AGG + chr3_1:8982890-8982909 None:intergenic 45.0%
TTGTCTCGAAATACCACCTG+TGG + chr3_1:8982406-8982425 None:intergenic 45.0%
GACGAAACTTCCTCGACATT+TGG - chr3_1:8982683-8982702 Msa0347750:CDS 45.0%
ACTTCCTCGACATTTGGCAT+TGG - chr3_1:8982689-8982708 Msa0347750:CDS 45.0%
CCGTCCAAATTTCCTGAATC+AGG + chr3_1:8982890-8982909 None:intergenic 45.0%
! GAATGTCACAGCCTTGTGCT+TGG - chr3_1:8982364-8982383 Msa0347750:CDS 50.0%
TGGACCAATGCCAAATGTCG+AGG + chr3_1:8982696-8982715 None:intergenic 50.0%
AGAGGATCAAGGCCTGATTC+AGG - chr3_1:8982875-8982894 Msa0347750:CDS 50.0%
TTGGACGGTATTAGCCAAGG+TGG - chr3_1:8982902-8982921 Msa0347750:CDS 50.0%
AAGATGTAGCAGCACCACCT+TGG + chr3_1:8982919-8982938 None:intergenic 50.0%
GGTTCAATGAGGACGAGATC+AGG - chr3_1:8982959-8982978 Msa0347750:CDS 50.0%
CTTGGCGCCACCATTTCTTA+CGG + chr3_1:8982997-8983016 None:intergenic 50.0%
! GAATGTCACAGCCTTGTGCT+TGG - chr3_1:8982364-8982383 Msa0347750:CDS 50.0%
TGGACCAATGCCAAATGTCG+AGG + chr3_1:8982696-8982715 None:intergenic 50.0%
AGAGGATCAAGGCCTGATTC+AGG - chr3_1:8982875-8982894 Msa0347750:CDS 50.0%
TTGGACGGTATTAGCCAAGG+TGG - chr3_1:8982902-8982921 Msa0347750:CDS 50.0%
AAGATGTAGCAGCACCACCT+TGG + chr3_1:8982919-8982938 None:intergenic 50.0%
GGTTCAATGAGGACGAGATC+AGG - chr3_1:8982959-8982978 Msa0347750:CDS 50.0%
CTTGGCGCCACCATTTCTTA+CGG + chr3_1:8982997-8983016 None:intergenic 50.0%
! TGTCACAGCCTTGTGCTTGG+AGG - chr3_1:8982367-8982386 Msa0347750:CDS 55.0%
AGGCGGTTCCTTCTTTCCAC+AGG - chr3_1:8982387-8982406 Msa0347750:CDS 55.0%
CGGTTCCTTCTTTCCACAGG+TGG - chr3_1:8982390-8982409 Msa0347750:CDS 55.0%
! TGTCACAGCCTTGTGCTTGG+AGG - chr3_1:8982367-8982386 Msa0347750:CDS 55.0%
AGGCGGTTCCTTCTTTCCAC+AGG - chr3_1:8982387-8982406 Msa0347750:CDS 55.0%
CGGTTCCTTCTTTCCACAGG+TGG - chr3_1:8982390-8982409 Msa0347750:CDS 55.0%
! CACAGCCTTGTGCTTGGAGG+CGG - chr3_1:8982370-8982389 Msa0347750:CDS 60.0%
AGGAACCGCCTCCAAGCACA+AGG + chr3_1:8982378-8982397 None:intergenic 60.0%
! CACAGCCTTGTGCTTGGAGG+CGG - chr3_1:8982370-8982389 Msa0347750:CDS 60.0%
AGGAACCGCCTCCAAGCACA+AGG + chr3_1:8982378-8982397 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 8982272 8983108 8982272 ID=Msa0347750;Name=Msa0347750
chr3_1 mRNA 8982272 8983108 8982272 ID=Msa0347750-mRNA-1;Parent=Msa0347750;Name=Msa0347750-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|278
chr3_1 exon 8982272 8983108 8982272 ID=Msa0347750-mRNA-1:exon:2630;Parent=Msa0347750-mRNA-1
chr3_1 CDS 8982272 8983108 8982272 ID=Msa0347750-mRNA-1:cds;Parent=Msa0347750-mRNA-1
Gene Sequence

>Msa0347750

ATGGATTCAATTCAAAATAAAGTTCATTACTGTTGTGTTTCTAAAGGTAGCCACATCTTGTATGCGTATAGTGGTGGAGATAAAGAAGTTGAGAATGTCACAGCCTTGTGCTTGGAGGCGGTTCCTTCTTTCCACAGGTGGTATTTCGAGACAATAGGTAAAAGGACTTACGGGTTTTTAGTGGAAGATGGATATGTTTACTTCACAATTGTAGATGAAGGTCTTGGTAACTTGGTAGTTCTTCAGTTTTTGGAACATGTCAGAGATGAATTCAGAAAGGTAGCTAGAAAAGGTTCAAGGGGATTTTCGCCAAACATGAATTCAGTTTACGTTCAAGAGAAACTGGTTCCTGTCATTCGTAATCTGATCACTTCATTAGAGAATGTTTCACATAGTGGTAGTAATTGGAGAGACGAAACTTCCTCGACATTTGGCATTGGTCCATCTCCATCACCAAGTAATTTGAATGGACAAATTGAAAATGTTGTTTCAACCAAAGCCCCTTTATTGGGAAAATCTAGCAAGCAAGAGAAGAAGAAAGTAAAGGATCATGTGATTGCAATGAGAGATGTTGAGTTAGAGGAGCATAAAAAATCTACAGATAGAGGATCAAGGCCTGATTCAGGAAATTTGGACGGTATTAGCCAAGGTGGTGCTGCTACATCTTCTTCTTTGCAAAAGGATATGGGTTCAATGAGGACGAGATCAGGCCCTCAAAACGTCCGTAAGAAATGGTGGCGCCAAGTACGCATTGTTCTAGCTATCGATGCAGCTGTATGTATAATATTATTTGTCATCTGGTTAGTAATATGCCGTGGTATATCATGCATTCGATAG

Protein sequence

>Msa0347750

MDSIQNKVHYCCVSKGSHILYAYSGGDKEVENVTALCLEAVPSFHRWYFETIGKRTYGFLVEDGYVYFTIVDEGLGNLVVLQFLEHVRDEFRKVARKGSRGFSPNMNSVYVQEKLVPVIRNLITSLENVSHSGSNWRDETSSTFGIGPSPSPSNLNGQIENVVSTKAPLLGKSSKQEKKKVKDHVIAMRDVELEEHKKSTDRGSRPDSGNLDGISQGGAATSSSLQKDMGSMRTRSGPQNVRKKWWRQVRIVLAIDAAVCIILFVIWLVICRGISCIR*