AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0245200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245200 MtrunA17_Chr2g0299271 98.008 502 8 1 1 502 1 500 0.0 1023
Msa0245200 MtrunA17_Chr2g0330271 74.172 453 107 4 59 501 16 468 0.0 710
Msa0245200 MtrunA17_Chr4g0052291 31.713 432 245 12 64 482 21 415 1.36e-59 202
Msa0245200 MtrunA17_Chr4g0036951 29.216 421 253 9 64 481 17 395 1.24e-53 186
Msa0245200 MtrunA17_Chr8g0377441 29.595 321 184 10 153 456 155 450 7.34e-31 124
Msa0245200 MtrunA17_Chr5g0406931 28.660 321 184 12 155 456 144 438 2.76e-25 108
Msa0245200 MtrunA17_Chr4g0067151 31.795 195 106 8 211 405 23 190 6.10e-14 72.8
Msa0245200 MtrunA17_Chr1g0185501 33.071 127 74 5 279 405 66 181 1.48e-12 68.6
Msa0245200 MtrunA17_Chr8g0352821 29.050 179 99 8 279 456 264 415 5.00e-12 68.6
Msa0245200 MtrunA17_Chr3g0136971 25.962 208 117 8 199 405 402 573 5.31e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0245200 AT2G19520.1 80.990 505 76 5 3 499 14 506 0.0 835
Msa0245200 AT4G29730.1 71.058 501 123 6 6 500 3 487 0.0 738
Msa0245200 AT4G29730.3 69.885 435 109 6 6 434 3 421 0.0 624
Msa0245200 AT4G29730.2 69.885 435 109 6 6 434 3 421 0.0 624
Msa0245200 AT5G58230.1 32.955 440 243 13 60 485 17 418 1.86e-65 218
Msa0245200 AT2G16780.1 30.892 437 256 12 52 481 6 403 2.09e-64 215
Msa0245200 AT4G35050.1 30.660 424 250 10 60 477 15 400 1.06e-62 211
Msa0245200 AT2G19540.1 27.469 324 189 9 153 456 152 449 1.19e-27 115
Msa0245200 AT3G49660.1 35.714 140 79 5 266 405 55 183 3.38e-14 73.9
Msa0245200 AT5G25150.1 26.570 207 114 8 200 405 403 572 5.89e-11 65.5
Msa0245200 AT5G25150.2 27.053 207 113 9 200 405 403 572 5.97e-11 65.5

Find 138 sgRNAs with CRISPR-Local

Find 504 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTCTTGTCTCATATTA+TGG 0.145473 2_2:-24652208 Msa0245200:CDS
ACTCATCCCTATGTGCTTTC+TGG 0.148634 2_2:-24652901 Msa0245200:CDS
AACTGCAGGTGAACAGAATT+AGG 0.201591 2_2:-24653658 Msa0245200:intron
TTCTTCACTGCGCCGGTTGA+TGG 0.237649 2_2:+24655703 None:intergenic
TGCCATTATGTTCACTAAAA+TGG 0.251885 2_2:+24648396 None:intergenic
GTCTAAATCAATTGTTTCTT+AGG 0.254712 2_2:-24648229 Msa0245200:three_prime_UTR
CCGACAAATAATTTAGTTCA+TGG 0.256277 2_2:-24648473 Msa0245200:exon
CGTCGCAATCTCACTTCTAA+TGG 0.263138 2_2:-24651025 Msa0245200:CDS
TTGTTCCTGTTCTTTATGAT+TGG 0.288898 2_2:-24655507 Msa0245200:CDS
GATGATAATCTGATTCTTAC+TGG 0.289842 2_2:-24651514 Msa0245200:CDS
CGAATATCAGGTTCTCATTT+GGG 0.289930 2_2:-24653495 Msa0245200:intron
CCAGACAAATCATCTGTATT+TGG 0.294688 2_2:-24650843 Msa0245200:CDS
CAGACCAGAGGATGAGGTTT+TGG 0.296223 2_2:-24648544 Msa0245200:CDS
TTACGGTAGAAAGCATTTCT+AGG 0.301664 2_2:+24648275 None:intergenic
TTTGGCCTTCTCTCTCTTGC+CGG 0.315265 2_2:-24655465 Msa0245200:intron
GGCTGCTGTCCTTTGTGTTC+AGG 0.317326 2_2:-24650966 Msa0245200:intron
AAGATGGTCTCTTGAACATT+TGG 0.323836 2_2:-24650809 Msa0245200:CDS
TTCTTGTCTTCCTTAGGTTT+AGG 0.325143 2_2:+24655658 None:intergenic
TCGAATATCAGGTTCTCATT+TGG 0.327566 2_2:-24653496 Msa0245200:intron
TCGTCAGAGGCTTTATCTTT+CGG 0.354547 2_2:-24654856 Msa0245200:CDS
AGTAGGGCTATCAGCAGTTT+TGG 0.361683 2_2:+24652669 None:intergenic
TGATTCTTGTCTCATATTAT+GGG 0.362654 2_2:-24652207 Msa0245200:CDS
GTCGCAATCTCACTTCTAAT+GGG 0.366665 2_2:-24651024 Msa0245200:CDS
CCTTATGAGCCTCAAATTTG+TGG 0.370728 2_2:+24650987 None:intergenic
AGATGGTCTCTTGAACATTT+GGG 0.379807 2_2:-24650808 Msa0245200:CDS
GGGTAAGCAAATTACCTAGA+AGG 0.386078 2_2:+24652586 None:intergenic
CCACAAATTTGAGGCTCATA+AGG 0.390431 2_2:-24650987 Msa0245200:CDS
TGGCTCTAGTCCTGTGGTTA+AGG 0.390911 2_2:-24652174 Msa0245200:intron
ATCTCACTTCTAATGGGGTT+GGG 0.396956 2_2:-24651018 Msa0245200:CDS
TCTTCTTTCTTGTCTTCCTT+AGG 0.398125 2_2:+24655652 None:intergenic
TTCGCAATCACCAAAGTATT+CGG 0.400930 2_2:+24654584 None:intergenic
TCAAATAGACGTACCAGATC+TGG 0.403811 2_2:+24653419 None:intergenic
CTGTAGCAGCAGATGTTATA+TGG 0.406310 2_2:+24652719 None:intergenic
GTCTTGTACTTCTTGACAAA+TGG 0.411539 2_2:+24654149 None:intergenic
CTGATCTTCACTGTGTTGAC+TGG 0.414362 2_2:-24651546 Msa0245200:CDS
ACAAAGTTGTTGACTTTCAC+TGG 0.415463 2_2:-24649676 Msa0245200:CDS
CTCCTTCTTCTTCACTGCGC+CGG 0.419607 2_2:+24655696 None:intergenic
TCGCTAACCATAACCTCGTT+TGG 0.419771 2_2:-24655483 Msa0245200:CDS
GAGAAGGCCAAACGAGGTTA+TGG 0.420013 2_2:+24655476 None:intergenic
CAGAGAGAGTGTGAGAGAAA+TGG 0.424169 2_2:-24655734 Msa0245200:exon
AGAACATGTAGGGTGGAGAT+TGG 0.427478 2_2:-24648320 Msa0245200:three_prime_UTR
CCATGAACTAAATTATTTGT+CGG 0.431015 2_2:+24648473 None:intergenic
CATGTTCTGTCCAGTGAGAA+TGG 0.434413 2_2:+24648335 None:intergenic
TATGAAATTTATACCTCGCC+TGG 0.449337 2_2:+24654116 None:intergenic
GTGGGGTCCTCAGCTTGAAC+AGG 0.450211 2_2:-24654892 Msa0245200:CDS
TAAGAATCAGATTATCATCA+TGG 0.450908 2_2:+24651518 None:intergenic
CCAAATACAGATGATTTGTC+TGG 0.454135 2_2:+24650843 None:intergenic
AATCTCACTTCTAATGGGGT+TGG 0.456850 2_2:-24651019 Msa0245200:CDS
AGCTGCTGAGCACATTTCTC+AGG 0.456989 2_2:-24654534 Msa0245200:intron
CCAAGGACAGCATGACGGTT+AGG 0.459165 2_2:+24653458 None:intergenic
CCTAACCGTCATGCTGTCCT+TGG 0.461359 2_2:-24653458 Msa0245200:CDS
CTTTCTACCGTAAGCAAATG+AGG 0.468903 2_2:-24648265 Msa0245200:three_prime_UTR
AAAACAATAAATTCTCCTCC+AGG 0.470379 2_2:-24650651 Msa0245200:CDS
ACTGCAGGTGAACAGAATTA+GGG 0.472069 2_2:-24653657 Msa0245200:intron
GAGCAAACTCTGCATTATCT+TGG 0.475826 2_2:+24652938 None:intergenic
GCGAGCCAATCATAAAGAAC+AGG 0.476414 2_2:+24655502 None:intergenic
GTGGAGATTGGAGAATGATT+AGG 0.478014 2_2:-24648308 Msa0245200:three_prime_UTR
GTCTCCTATCCACAAATTTG+AGG 0.478555 2_2:-24650996 Msa0245200:CDS
AATGGATCCACCAGACTTGT+TGG 0.479125 2_2:+24652693 None:intergenic
GAGGCTTTATCTTTCGGAGC+AGG 0.480425 2_2:-24654850 Msa0245200:intron
TACGGTAGAAAGCATTTCTA+GGG 0.481626 2_2:+24648276 None:intergenic
GCTACAGACTCCAACAAGTC+TGG 0.481812 2_2:-24652703 Msa0245200:CDS
TACAAACTCTCGTCCAGATC+TGG 0.484345 2_2:-24653432 Msa0245200:intron
ATGGAGACACCACCATCAAC+CGG 0.492633 2_2:-24655715 Msa0245200:CDS
GCCACAAAATTCTAAGATTG+TGG 0.493140 2_2:-24653630 Msa0245200:CDS
TCTGCCAAAACCTCATCCTC+TGG 0.508658 2_2:+24648540 None:intergenic
TACCTCTTGGTCCGACAGTA+GGG 0.509021 2_2:+24652653 None:intergenic
TTTGGAAGTTCAGCAGAAGA+TGG 0.511076 2_2:-24650825 Msa0245200:CDS
TGCCCAGAGTATATACCTCT+TGG 0.513172 2_2:+24652640 None:intergenic
GAAAGCACATAGGGATGAGT+AGG 0.518930 2_2:+24652904 None:intergenic
AAGAATCAGATTATCATCAT+GGG 0.520993 2_2:+24651519 None:intergenic
GGACCAAGAGGTATATACTC+TGG 0.523021 2_2:-24652643 Msa0245200:CDS
TTGATGAGAAGTACACTCAA+TGG 0.524523 2_2:-24655537 Msa0245200:CDS
TGAGCCTCAAATTTGTGGAT+AGG 0.524528 2_2:+24650992 None:intergenic
ATTGTGAGGTTGTGAAGACT+AGG 0.526799 2_2:-24654562 Msa0245200:CDS
GCTCTACAGACCAGAGGATG+AGG 0.528088 2_2:-24648550 Msa0245200:CDS
TATTTCAGTCAAACTTGATG+TGG 0.530772 2_2:-24648430 Msa0245200:three_prime_UTR
GCGCAGGAGTTCTGTAGTGT+TGG 0.532397 2_2:-24652233 Msa0245200:CDS
CATCCCTATGTGCTTTCTGG+AGG 0.537406 2_2:-24652898 Msa0245200:intron
ATACCTCTTGGTCCGACAGT+AGG 0.539677 2_2:+24652652 None:intergenic
GAACATTTGGGATTATGAGA+AGG 0.540866 2_2:-24650796 Msa0245200:intron
ATAGGCTATATGCTAAAAGC+TGG 0.544663 2_2:+24648183 None:intergenic
GACCAAGAGGTATATACTCT+GGG 0.545440 2_2:-24652642 Msa0245200:CDS
ATATTATGGGATGCACGTGT+TGG 0.547603 2_2:-24652194 Msa0245200:CDS
TATGTAACCTCATTTGCTTA+CGG 0.547697 2_2:+24648258 None:intergenic
ACTGGAATGCACATGATCCA+TGG 0.552739 2_2:-24649658 Msa0245200:CDS
ATCAGGGCTGTCTGTGTGAG+TGG 0.558313 2_2:+24653607 None:intergenic
CAACCTCCAGAAAGCACATA+GGG 0.558501 2_2:+24652895 None:intergenic
CTCACTGGACAGAACATGTA+GGG 0.559729 2_2:-24648330 Msa0245200:three_prime_UTR
AAGACAAAACAGTCGTGTTG+TGG 0.560573 2_2:-24652753 Msa0245200:CDS
GGTAAGCAAATTACCTAGAA+GGG 0.562164 2_2:+24652587 None:intergenic
TTCACTGCGCCGGTTGATGG+TGG 0.564282 2_2:+24655706 None:intergenic
ATTGTGAAAGTACTGGTGGA+GGG 0.565365 2_2:-24649613 Msa0245200:CDS
GATTGTGAAAGTACTGGTGG+AGG 0.565707 2_2:-24649614 Msa0245200:CDS
ATTATCATCCTGAAGTGCGC+AGG 0.570960 2_2:-24652249 Msa0245200:intron
GACACACTAACAAGTGTCCA+TGG 0.573972 2_2:+24649641 None:intergenic
GACACCGAAAGAATCGAAGA+AGG 0.577562 2_2:-24655608 Msa0245200:CDS
TCTGATGATTGTGAAAGTAC+TGG 0.578204 2_2:-24649620 Msa0245200:CDS
TATGTAATTCTTAGCTCATG+TGG 0.578206 2_2:-24648360 Msa0245200:three_prime_UTR
TACAAGACTATCATACATCC+AGG 0.578483 2_2:-24654134 Msa0245200:CDS
AGGACGCAAACCTAAACCTA+AGG 0.580952 2_2:-24655668 Msa0245200:CDS
CCAACCTCCAGAAAGCACAT+AGG 0.581090 2_2:+24652894 None:intergenic
TCATGTGGATCCATTCTCAC+TGG 0.586638 2_2:-24648345 Msa0245200:three_prime_UTR
TGGAAGTGTTCCGAATACTT+TGG 0.588867 2_2:-24654594 Msa0245200:CDS
AAAGCATATACCTTAACCAC+AGG 0.593858 2_2:+24652164 None:intergenic
CCTAACCGGCAAGAGAGAGA+AGG 0.596594 2_2:+24655460 None:intergenic
ATGATAATCTGATTCTTACT+GGG 0.596654 2_2:-24651513 Msa0245200:intron
CGTACCTATGACCAGCATGT+TGG 0.597330 2_2:+24650619 None:intergenic
TGTGAAAGTACTGGTGGAGG+GGG 0.601796 2_2:-24649611 Msa0245200:CDS
GACGAGAGTTTGTAGCTCCA+AGG 0.607337 2_2:+24653441 None:intergenic
AAACAATAAATTCTCCTCCA+GGG 0.610657 2_2:-24650650 Msa0245200:CDS
AACCGGCGCAGTGAAGAAGA+AGG 0.613935 2_2:-24655698 Msa0245200:CDS
GTGAAGAAGAAGGAGACAAG+AGG 0.617029 2_2:-24655688 Msa0245200:CDS
GAAATTCAAATCTCATGTGG+TGG 0.621431 2_2:-24648511 Msa0245200:CDS
AGGTATATACTCTGGGCATG+AGG 0.623016 2_2:-24652635 Msa0245200:CDS
GGCAAGAAGATAGAGCGAGC+TGG 0.627353 2_2:-24650675 Msa0245200:CDS
ACAGACTCCAACAAGTCTGG+TGG 0.632810 2_2:-24652700 Msa0245200:CDS
AAAGCACATAGGGATGAGTA+GGG 0.634618 2_2:+24652905 None:intergenic
TAAGTAGCCTGTTCAAGCTG+AGG 0.637076 2_2:+24654885 None:intergenic
TTGTGAAAGTACTGGTGGAG+GGG 0.637305 2_2:-24649612 Msa0245200:CDS
AGCCCTACTGTCGGACCAAG+AGG 0.638399 2_2:-24652655 Msa0245200:CDS
TAGCTCCAAGGACAGCATGA+CGG 0.640688 2_2:+24653453 None:intergenic
TCTCACTGGACAGAACATGT+AGG 0.641219 2_2:-24648331 Msa0245200:three_prime_UTR
GATGATTGTGAAAGTACTGG+TGG 0.644516 2_2:-24649617 Msa0245200:CDS
TCGCAATCTCACTTCTAATG+GGG 0.646953 2_2:-24651023 Msa0245200:CDS
GGAGAAATTCAAATCTCATG+TGG 0.650248 2_2:-24648514 Msa0245200:CDS
ACTGCTGATAGCCCTACTGT+CGG 0.663440 2_2:-24652664 Msa0245200:CDS
GACTATCATACATCCAGGCG+AGG 0.665684 2_2:-24654129 Msa0245200:intron
TTGTGAGGTTGTGAAGACTA+GGG 0.669241 2_2:-24654561 Msa0245200:CDS
AGAATCAGATTATCATCATG+GGG 0.671943 2_2:+24651520 None:intergenic
TTTGGTGATTGCGAATTGTG+AGG 0.672940 2_2:-24654576 Msa0245200:CDS
TGAGGATACTGTTGAAGACG+TGG 0.676563 2_2:-24652617 Msa0245200:CDS
AAGAGAGAGAAGGCCAAACG+AGG 0.676994 2_2:+24655470 None:intergenic
ACGTGTTGGCTCTAGTCCTG+TGG 0.683499 2_2:-24652180 Msa0245200:CDS
CTACTTACAAGAATCGTCAG+AGG 0.686539 2_2:-24654869 Msa0245200:CDS
AATAAGTCACCTGAACACAA+AGG 0.689394 2_2:+24650957 None:intergenic
TGATTTGCTCTACAGACCAG+AGG 0.693020 2_2:-24648556 Msa0245200:CDS
ACTGGACAGAACATGTAGGG+TGG 0.695101 2_2:-24648327 Msa0245200:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATTTTGTTAAATTTT+TGG - chr2_2:24648549-24648568 Msa0245200:CDS 10.0%
!! ATCAGAAAATTATATTTAAT+TGG + chr2_2:24653521-24653540 None:intergenic 10.0%
!!! AAATTTTTGGTTTTATTTGA+TGG - chr2_2:24648562-24648581 Msa0245200:CDS 15.0%
!!! TTTTGTTTGAAGTTTTTTTT+TGG - chr2_2:24648695-24648714 Msa0245200:intron 15.0%
!!! TTTGTTTTTGTGAAAATTTT+AGG - chr2_2:24648828-24648847 Msa0245200:intron 15.0%
!!! TTTTGTTGTAATGATTTTTT+AGG - chr2_2:24648983-24649002 Msa0245200:intron 15.0%
!!! TTTGTTGTAATGATTTTTTA+GGG - chr2_2:24648984-24649003 Msa0245200:intron 15.0%
!! AAAAACCAAAAAATCAAAAT+GGG + chr2_2:24649352-24649371 None:intergenic 15.0%
!! ATTTATCTTTGAATAATTGT+GGG + chr2_2:24649981-24650000 None:intergenic 15.0%
!! ATATATAAACCATTAATTAC+AGG + chr2_2:24650235-24650254 None:intergenic 15.0%
!! GTAATTAATGGTTTATATAT+TGG - chr2_2:24650235-24650254 Msa0245200:intron 15.0%
!!! TTTCTAAAGAATAAAAACAA+TGG + chr2_2:24650427-24650446 None:intergenic 15.0%
!!! TTGTTTTTATTCTTTAGAAA+TGG - chr2_2:24650427-24650446 Msa0245200:intron 15.0%
!!! GAAATAAGTTTTTTTAAAAC+AGG + chr2_2:24650930-24650949 None:intergenic 15.0%
!!! ATGTTTTCAAATTTTATTCA+AGG - chr2_2:24651632-24651651 Msa0245200:intron 15.0%
!!! TGGATTAATACTATATTTTA+TGG - chr2_2:24651686-24651705 Msa0245200:intron 15.0%
!!! TAATAAATAAATTTGACTTG+TGG - chr2_2:24651932-24651951 Msa0245200:intron 15.0%
!! TATGTTACACTATAAAAAAA+GGG + chr2_2:24652336-24652355 None:intergenic 15.0%
!! GAAAAAGTTAAGAAAAAATT+TGG + chr2_2:24652775-24652794 None:intergenic 15.0%
!! AAAATTATATTTAATTGGTC+TGG + chr2_2:24653516-24653535 None:intergenic 15.0%
!! GTCAGAAAATTATATTTAAT+TGG + chr2_2:24653691-24653710 None:intergenic 15.0%
!! GAATCATTTATGTTAAATAT+TGG - chr2_2:24654115-24654134 Msa0245200:intron 15.0%
!!! GTATTTAAAATGAAATAACA+AGG + chr2_2:24654261-24654280 None:intergenic 15.0%
!! TAATTACTAAATATACTTAG+AGG + chr2_2:24654430-24654449 None:intergenic 15.0%
!! AATTTCAATTGTATAAAAGT+GGG + chr2_2:24654454-24654473 None:intergenic 15.0%
!!! TTTTAAAAATTTAATGATGG+TGG - chr2_2:24654708-24654727 Msa0245200:intron 15.0%
!! TTTAAAAATTTAATGATGGT+GGG - chr2_2:24654709-24654728 Msa0245200:intron 15.0%
!! AAGGAAAAAAAAATTCATAA+TGG + chr2_2:24655344-24655363 None:intergenic 15.0%
!!! TGAAATGTTGTGTTTTTTTT+AGG - chr2_2:24648601-24648620 Msa0245200:intron 20.0%
!!! GAAATGTTGTGTTTTTTTTA+GGG - chr2_2:24648602-24648621 Msa0245200:intron 20.0%
!!! TTTTTTTTAGGGTTTTTGTT+TGG - chr2_2:24648613-24648632 Msa0245200:intron 20.0%
!!! GCTTATGGTAAAATATTTTA+GGG - chr2_2:24648773-24648792 Msa0245200:intron 20.0%
!! AATGTTGTAATTATGTTTGA+TGG - chr2_2:24648867-24648886 Msa0245200:intron 20.0%
!! ATGTTGTAATTATGTTTGAT+GGG - chr2_2:24648868-24648887 Msa0245200:intron 20.0%
!!! TTTTAGGGTTTTTGTTTTTT+TGG - chr2_2:24648999-24649018 Msa0245200:intron 20.0%
!!! TATGTTTTGTGATTTTTGAT+AGG - chr2_2:24649070-24649089 Msa0245200:intron 20.0%
!!! AATCTTTTTGTTGTTGAAAT+GGG - chr2_2:24649168-24649187 Msa0245200:intron 20.0%
!!! GTTAAAAGATTGAACTTTTT+TGG - chr2_2:24649198-24649217 Msa0245200:intron 20.0%
!!! ATTGATTTTTGTTGTTGAAA+TGG - chr2_2:24649274-24649293 Msa0245200:intron 20.0%
!!! TTGATTTTTGTTGTTGAAAT+GGG - chr2_2:24649275-24649294 Msa0245200:intron 20.0%
!! CAAAAACCAAAAAATCAAAA+TGG + chr2_2:24649353-24649372 None:intergenic 20.0%
!!! CATTTTGATTTTTTGGTTTT+TGG - chr2_2:24649351-24649370 Msa0245200:intron 20.0%
!! AACAAACTAAAACTACTAAA+AGG + chr2_2:24649513-24649532 None:intergenic 20.0%
!!! CCATTTTATCAAATTATTAC+TGG + chr2_2:24649587-24649606 None:intergenic 20.0%
!! CCAGTAATAATTTGATAAAA+TGG - chr2_2:24649584-24649603 Msa0245200:intron 20.0%
!!! TATTTTTCAGTTTAATGAAG+AGG - chr2_2:24649804-24649823 Msa0245200:intron 20.0%
!! CATTTATCTTTGAATAATTG+TGG + chr2_2:24649982-24650001 None:intergenic 20.0%
!! TTATATATGCCTGTAATTAA+TGG - chr2_2:24650223-24650242 Msa0245200:intron 20.0%
!!! TTTTGTTATGTTATTTGTCA+TGG - chr2_2:24650970-24650989 Msa0245200:CDS 20.0%
!!! TTTTTCAAGTATGTTTTGAA+AGG - chr2_2:24651585-24651604 Msa0245200:intron 20.0%
!!! TTTTCAAGTATGTTTTGAAA+GGG - chr2_2:24651586-24651605 Msa0245200:intron 20.0%
!! AGATTTAATTATGCTATCAT+TGG - chr2_2:24652002-24652021 Msa0245200:intron 20.0%
!!! TTATACATGTATGGATTTTA+AGG - chr2_2:24652113-24652132 Msa0245200:intron 20.0%
!! ATGTTACACTATAAAAAAAG+GGG + chr2_2:24652335-24652354 None:intergenic 20.0%
!! CTATGTTACACTATAAAAAA+AGG + chr2_2:24652337-24652356 None:intergenic 20.0%
!! AACAAATATTGAAATCAAAC+TGG + chr2_2:24652858-24652877 None:intergenic 20.0%
!!! GTTTGATTTCAATATTTGTT+TGG - chr2_2:24652858-24652877 Msa0245200:intron 20.0%
!! TATTTAATTGGCATTTCATA+TGG + chr2_2:24653679-24653698 None:intergenic 20.0%
!!! TCAATTACTATTGGTTAAAA+TGG - chr2_2:24653880-24653899 Msa0245200:intron 20.0%
!! TTTAACATAAATGATTCAGA+AGG + chr2_2:24654112-24654131 None:intergenic 20.0%
!! GTTATTAAATGTCAAAATAC+TGG - chr2_2:24654168-24654187 Msa0245200:CDS 20.0%
!! CAATTTCAATTGTATAAAAG+TGG + chr2_2:24654455-24654474 None:intergenic 20.0%
!!! AAGATTTTGATATTGAGATT+TGG + chr2_2:24654593-24654612 None:intergenic 20.0%
!! TATTCACATTAAGAAAAAGA+GGG + chr2_2:24655079-24655098 None:intergenic 20.0%
!! TTATTCACATTAAGAAAAAG+AGG + chr2_2:24655080-24655099 None:intergenic 20.0%
!!! GGTTTTTGTTTGGAAATTTT+GGG - chr2_2:24648623-24648642 Msa0245200:intron 25.0%
!! ATGTTGATTGAAGAATGTTA+TGG - chr2_2:24648650-24648669 Msa0245200:intron 25.0%
! TGTAATGATGTTTAATGAGT+TGG - chr2_2:24648739-24648758 Msa0245200:intron 25.0%
!! TAATGAGTTGGATTGAATTA+TGG - chr2_2:24648751-24648770 Msa0245200:intron 25.0%
!! GGCTTATGGTAAAATATTTT+AGG - chr2_2:24648772-24648791 Msa0245200:intron 25.0%
!!! GGTTTTTGTTTTTTTGGTTT+TGG - chr2_2:24649005-24649024 Msa0245200:intron 25.0%
!! TTTTGTGATTTTTGATAGGT+GGG - chr2_2:24649074-24649093 Msa0245200:intron 25.0%
!!! GAATCTTTTTGTTGTTGAAA+TGG - chr2_2:24649167-24649186 Msa0245200:intron 25.0%
!!! AAAGATTGAACTTTTTTGGT+TGG - chr2_2:24649202-24649221 Msa0245200:intron 25.0%
!!! TGGTTTTATTGTTGTTGAAA+TGG - chr2_2:24649222-24649241 Msa0245200:intron 25.0%
!!! GGTTTTATTGTTGTTGAAAT+GGG - chr2_2:24649223-24649242 Msa0245200:intron 25.0%
!!! GAAAACCCATTTTGATTTTT+TGG - chr2_2:24649344-24649363 Msa0245200:intron 25.0%
!! CATATTGACATTCTGAAAAT+TGG - chr2_2:24649887-24649906 Msa0245200:intron 25.0%
!!! ATAATAACCAGTGTTGTTTA+CGG - chr2_2:24649941-24649960 Msa0245200:intron 25.0%
!! ATTATGCTTTTGATATGAGT+AGG - chr2_2:24650273-24650292 Msa0245200:intron 25.0%
!! TTATGCTTTTGATATGAGTA+GGG - chr2_2:24650274-24650293 Msa0245200:intron 25.0%
! AAAGAATAAAAACAATGGCA+AGG + chr2_2:24650422-24650441 None:intergenic 25.0%
! TATTCGAAGAGTCATAAATA+AGG + chr2_2:24650475-24650494 None:intergenic 25.0%
! TTCCTAGATTGAAAATGTTA+TGG + chr2_2:24650613-24650632 None:intergenic 25.0%
!! TTTTGATCTCATGTACAAAT+TGG + chr2_2:24650644-24650663 None:intergenic 25.0%
!! AGTTTTTGTGAATTGTGATT+CGG - chr2_2:24650709-24650728 Msa0245200:intron 25.0%
!! TTAAACTTTTCTGTTTCATG+AGG - chr2_2:24650770-24650789 Msa0245200:intron 25.0%
!! TAAACTTTTCTGTTTCATGA+GGG - chr2_2:24650771-24650790 Msa0245200:intron 25.0%
!!! GGTTCAAAAACTTTGAAATT+GGG - chr2_2:24650838-24650857 Msa0245200:CDS 25.0%
!!! TTTTAAAACAGGATGATTCA+GGG + chr2_2:24650919-24650938 None:intergenic 25.0%
!!! TTTTTAAAACAGGATGATTC+AGG + chr2_2:24650920-24650939 None:intergenic 25.0%
! TTATTCATTGTTCATTGTGT+TGG - chr2_2:24651129-24651148 Msa0245200:intron 25.0%
! GTCATTGATAAAGGATAATA+TGG + chr2_2:24651554-24651573 None:intergenic 25.0%
!!! TTTCAAGTATGTTTTGAAAG+GGG - chr2_2:24651587-24651606 Msa0245200:intron 25.0%
! ATATTTATGTCAGGAAGATA+TGG + chr2_2:24651717-24651736 None:intergenic 25.0%
! AGGATGATAATATTTATGTC+AGG + chr2_2:24651726-24651745 None:intergenic 25.0%
! ATGATTCTTGTCTCATATTA+TGG - chr2_2:24651776-24651795 Msa0245200:intron 25.0%
! TGATTCTTGTCTCATATTAT+GGG - chr2_2:24651777-24651796 Msa0245200:intron 25.0%
! GGAAAACAAATTGAAATACA+TGG + chr2_2:24651855-24651874 None:intergenic 25.0%
!!! GACATGACTTTAATTTTTAC+TGG - chr2_2:24652088-24652107 Msa0245200:intron 25.0%
!!! TTACTGGTTTTATACATGTA+TGG - chr2_2:24652104-24652123 Msa0245200:intron 25.0%
! TGTTACACTATAAAAAAAGG+GGG + chr2_2:24652334-24652353 None:intergenic 25.0%
! TTTCATATCTGATGTGAATT+TGG - chr2_2:24652390-24652409 Msa0245200:intron 25.0%
! AAGAATCAGATTATCATCAT+GGG + chr2_2:24652468-24652487 None:intergenic 25.0%
! TAAGAATCAGATTATCATCA+TGG + chr2_2:24652469-24652488 None:intergenic 25.0%
! ATGATAATCTGATTCTTACT+GGG - chr2_2:24652471-24652490 Msa0245200:intron 25.0%
! GTGAAAATAAGACATAAAAC+CGG + chr2_2:24652505-24652524 None:intergenic 25.0%
! GTTGAAACTGAATTAAACAA+CGG + chr2_2:24652532-24652551 None:intergenic 25.0%
!!! TGAAAATACTTGCTGTAAAA+TGG - chr2_2:24652638-24652657 Msa0245200:CDS 25.0%
!!! TTTTCCATTTTTGCATTTGT+TGG - chr2_2:24652790-24652809 Msa0245200:intron 25.0%
! TAAACCAACAAATGCAAAAA+TGG + chr2_2:24652797-24652816 None:intergenic 25.0%
!! TAACACTTTGTTTAATTCAG+TGG - chr2_2:24653115-24653134 Msa0245200:intron 25.0%
! TCAGATGAATATGTTAAAGA+TGG + chr2_2:24653628-24653647 None:intergenic 25.0%
! ATATTGAATGTACAGTTTCT+AGG + chr2_2:24653955-24653974 None:intergenic 25.0%
!!! AAATATTGGATTTGTTAGAC+TGG - chr2_2:24654129-24654148 Msa0245200:intron 25.0%
! TAAAATGAAATAACAAGGTC+AGG + chr2_2:24654256-24654275 None:intergenic 25.0%
! TACTAAATATACTTAGAGGA+TGG + chr2_2:24654426-24654445 None:intergenic 25.0%
! AGATTATCAGACAGAATAAT+GGG + chr2_2:24654617-24654636 None:intergenic 25.0%
! AAGATTATCAGACAGAATAA+TGG + chr2_2:24654618-24654637 None:intergenic 25.0%
!! TCATAATGGAAAATGTAAAC+AGG + chr2_2:24655330-24655349 None:intergenic 25.0%
!!! TAAATTCGTTTTTGCAGATA+TGG - chr2_2:24655397-24655416 Msa0245200:intron 25.0%
! CCATGAACTAAATTATTTGT+CGG + chr2_2:24655514-24655533 None:intergenic 25.0%
!! GTCTAAATCAATTGTTTCTT+AGG - chr2_2:24655755-24655774 Msa0245200:five_prime_UTR 25.0%
! TTTTCCTTCTTCGATTCTTT+CGG + chr2_2:24648383-24648402 None:intergenic 30.0%
TTGTTCCTGTTCTTTATGAT+TGG - chr2_2:24648477-24648496 Msa0245200:exon 30.0%
ACAAAATCAAAAACCCTAAC+CGG + chr2_2:24648541-24648560 None:intergenic 30.0%
!! GGGTTTTTGTTTGGAAATTT+TGG - chr2_2:24648622-24648641 Msa0245200:intron 30.0%
!!! TGGTTTGTTTTTCTTTGTCT+AGG - chr2_2:24648670-24648689 Msa0245200:intron 30.0%
!! GGTTTGTTTTTCTTTGTCTA+GGG - chr2_2:24648671-24648690 Msa0245200:intron 30.0%
TTGGATTGAATTATGGCTTA+TGG - chr2_2:24648758-24648777 Msa0245200:intron 30.0%
! TGTTGTTGTAGTGTTTTTCT+AGG - chr2_2:24648802-24648821 Msa0245200:intron 30.0%
! GTTGTTGTAGTGTTTTTCTA+GGG - chr2_2:24648803-24648822 Msa0245200:intron 30.0%
! TGTAATTATGTTTGATGGGT+TGG - chr2_2:24648872-24648891 Msa0245200:intron 30.0%
! AATTATGGTTTGTGATAGTG+TGG - chr2_2:24648895-24648914 Msa0245200:intron 30.0%
!!! TGGTTTTGGTTGTGAAATTT+TGG - chr2_2:24649019-24649038 Msa0245200:intron 30.0%
!!! GGTTTTGGTTGTGAAATTTT+GGG - chr2_2:24649020-24649039 Msa0245200:intron 30.0%
! GTTTTGTGATTTTTGATAGG+TGG - chr2_2:24649073-24649092 Msa0245200:intron 30.0%
! TTTGTGATTTTTGATAGGTG+GGG - chr2_2:24649075-24649094 Msa0245200:intron 30.0%
! GTGTTTGTTGATGTTGTTAA+TGG - chr2_2:24649312-24649331 Msa0245200:intron 30.0%
ATGTTGTTAATGGAATGAGA+GGG - chr2_2:24649322-24649341 Msa0245200:intron 30.0%
!! TTGGTTTTTGATTAGACTGA+TGG - chr2_2:24649370-24649389 Msa0245200:intron 30.0%
!! AAATCTCTAAAACGAATCCA+AGG + chr2_2:24650185-24650204 None:intergenic 30.0%
ACTGTAAAGTTCTTACATCA+GGG + chr2_2:24650396-24650415 None:intergenic 30.0%
AACTGTAAAGTTCTTACATC+AGG + chr2_2:24650397-24650416 None:intergenic 30.0%
!! TTTAGAAATGGTTTGTTTCC+TGG - chr2_2:24650439-24650458 Msa0245200:intron 30.0%
TTTATGACTCTTCGAATATC+AGG - chr2_2:24650477-24650496 Msa0245200:intron 30.0%
! GTCCATAACATTTTCAATCT+AGG - chr2_2:24650608-24650627 Msa0245200:intron 30.0%
ACTTTGATCTCATGTACAAA+AGG + chr2_2:24650692-24650711 None:intergenic 30.0%
!! GGGTTCAAAAACTTTGAAAT+TGG - chr2_2:24650837-24650856 Msa0245200:CDS 30.0%
!! CAAAAACTTTGAAATTGGGA+TGG - chr2_2:24650842-24650861 Msa0245200:CDS 30.0%
TGGGATGGATATTATCAAAT+CGG - chr2_2:24650857-24650876 Msa0245200:intron 30.0%
TCCACATAATTCAAATTGGA+GGG + chr2_2:24650884-24650903 None:intergenic 30.0%
GAAGTCCACATAATTCAAAT+TGG + chr2_2:24650888-24650907 None:intergenic 30.0%
! TTTAAAACAGGATGATTCAG+GGG + chr2_2:24650918-24650937 None:intergenic 30.0%
AAAAAACTGAGTTGCATTTC+AGG - chr2_2:24651206-24651225 Msa0245200:intron 30.0%
GAATACTAAACTACTTAGCA+GGG + chr2_2:24651421-24651440 None:intergenic 30.0%
TGAATACTAAACTACTTAGC+AGG + chr2_2:24651422-24651441 None:intergenic 30.0%
!!! GTGCTTTTTCCTTATTAAAG+TGG - chr2_2:24651443-24651462 Msa0245200:intron 30.0%
! TGAGAATAGCCACTTTAATA+AGG + chr2_2:24651455-24651474 None:intergenic 30.0%
TTGTTCACCTTATGAACTTT+GGG - chr2_2:24651480-24651499 Msa0245200:intron 30.0%
AGTAGCTAAGTCATTGATAA+AGG + chr2_2:24651563-24651582 None:intergenic 30.0%
!! ATAAATTTGACTTGTGGTTG+AGG - chr2_2:24651938-24651957 Msa0245200:intron 30.0%
!! TAAATTTGACTTGTGGTTGA+GGG - chr2_2:24651939-24651958 Msa0245200:intron 30.0%
!! TGGTTTAGCCTATTGTTTTT+CGG + chr2_2:24651969-24651988 None:intergenic 30.0%
ATCATTGGACTTCATTTACT+TGG - chr2_2:24652017-24652036 Msa0245200:intron 30.0%
TCATTGGACTTCATTTACTT+GGG - chr2_2:24652018-24652037 Msa0245200:intron 30.0%
! TTCATTTACTTGGGACATTT+TGG - chr2_2:24652027-24652046 Msa0245200:intron 30.0%
TAAAGTCATGTCTCACTATA+CGG + chr2_2:24652080-24652099 None:intergenic 30.0%
AAGTTTATTCACGAACTCAT+TGG - chr2_2:24652232-24652251 Msa0245200:CDS 30.0%
! AACACTGATGTTTTATCAAC+TGG - chr2_2:24652268-24652287 Msa0245200:intron 30.0%
! ACACTGATGTTTTATCAACT+GGG - chr2_2:24652269-24652288 Msa0245200:intron 30.0%
AGAATCAGATTATCATCATG+GGG + chr2_2:24652467-24652486 None:intergenic 30.0%
GATGATAATCTGATTCTTAC+TGG - chr2_2:24652470-24652489 Msa0245200:intron 30.0%
ATGGCTGTAATATTACAGAA+TGG - chr2_2:24652657-24652676 Msa0245200:CDS 30.0%
TGGCTGTAATATTACAGAAT+GGG - chr2_2:24652658-24652677 Msa0245200:CDS 30.0%
ATTAGTTACAGTCTGATTGT+AGG - chr2_2:24652816-24652835 Msa0245200:intron 30.0%
TTGAAATCAAACTGGATTGA+GGG + chr2_2:24652850-24652869 None:intergenic 30.0%
ATTGAAATCAAACTGGATTG+AGG + chr2_2:24652851-24652870 None:intergenic 30.0%
!! TGAGAAGGTACAGTTTTAAT+TGG - chr2_2:24653203-24653222 Msa0245200:intron 30.0%
CAATAAAACATAACTGGTGT+GGG + chr2_2:24653250-24653269 None:intergenic 30.0%
!! ACCAGTTATGTTTTATTGCA+AGG - chr2_2:24653252-24653271 Msa0245200:intron 30.0%
ACCTTGCAATAAAACATAAC+TGG + chr2_2:24653256-24653275 None:intergenic 30.0%
AAAACAATAAATTCTCCTCC+AGG - chr2_2:24653333-24653352 Msa0245200:intron 30.0%
AAACAATAAATTCTCCTCCA+GGG - chr2_2:24653334-24653353 Msa0245200:intron 30.0%
AATTTGAGCAAAATCAGATG+AGG + chr2_2:24653561-24653580 None:intergenic 30.0%
! TCAAATTTTCTTACACCTGT+TGG - chr2_2:24653574-24653593 Msa0245200:intron 30.0%
! CAAATTTTCTTACACCTGTT+GGG - chr2_2:24653575-24653594 Msa0245200:intron 30.0%
TTAAAAAACAGAAACCCAAC+AGG + chr2_2:24653592-24653611 None:intergenic 30.0%
TGAGGAACATAAATAACATC+AGG + chr2_2:24653720-24653739 None:intergenic 30.0%
GTGTAAGAAAACTATAGAGT+TGG + chr2_2:24653756-24653775 None:intergenic 30.0%
! TATAGTTTTCTTACACCTGT+TGG - chr2_2:24653760-24653779 Msa0245200:intron 30.0%
AAAAGAAACAGAAATCCAAC+AGG + chr2_2:24653778-24653797 None:intergenic 30.0%
ATGAAGTTGACATCAAAATG+TGG + chr2_2:24653845-24653864 None:intergenic 30.0%
TTCTGAGCATCAATTACTAT+TGG - chr2_2:24653871-24653890 Msa0245200:intron 30.0%
ACTGTACATTCAATATGTAC+TGG - chr2_2:24653959-24653978 Msa0245200:intron 30.0%
TTCTACTGGAAATCATCAAT+TGG + chr2_2:24654001-24654020 None:intergenic 30.0%
! CTTTAAGAGATAAGTTCTAC+TGG + chr2_2:24654015-24654034 None:intergenic 30.0%
!! AAATACTGGATTTGTTAGAC+TGG - chr2_2:24654182-24654201 Msa0245200:intron 30.0%
GAAACTGCATCAAACAAATT+TGG + chr2_2:24654523-24654542 None:intergenic 30.0%
! AATTTGTTTGATGCAGTTTC+AGG - chr2_2:24654523-24654542 Msa0245200:intron 30.0%
GATTTAGAGAGACACAAATT+TGG - chr2_2:24654678-24654697 Msa0245200:intron 30.0%
AGACACAAAAAAGTAGATAG+TGG + chr2_2:24654737-24654756 None:intergenic 30.0%
! TTTTTGTGTCTATCTCCAAA+TGG - chr2_2:24654746-24654765 Msa0245200:intron 30.0%
!! GTATTTCTAGTCATGTTAGT+TGG - chr2_2:24654847-24654866 Msa0245200:intron 30.0%
ATATGCATGTTTGGATTTGT+TGG + chr2_2:24655107-24655126 None:intergenic 30.0%
! CAAGTTCTAATATGCATGTT+TGG + chr2_2:24655116-24655135 None:intergenic 30.0%
! ATTAGAACTTGTTTAACAGC+AGG - chr2_2:24655125-24655144 Msa0245200:intron 30.0%
GTGTATTTAGCTATTCAGTT+TGG + chr2_2:24655163-24655182 None:intergenic 30.0%
!! AAAGTGTCAAAAGTGTCAAA+TGG + chr2_2:24655185-24655204 None:intergenic 30.0%
CAAAACAGTAATCAACTTGT+GGG + chr2_2:24655258-24655277 None:intergenic 30.0%
TCAAAACAGTAATCAACTTG+TGG + chr2_2:24655259-24655278 None:intergenic 30.0%
!! AATAGTTTGTTACAACAGGA+AGG + chr2_2:24655363-24655382 None:intergenic 30.0%
!! CCAAAATAGTTTGTTACAAC+AGG + chr2_2:24655367-24655386 None:intergenic 30.0%
! CCTGTTGTAACAAACTATTT+TGG - chr2_2:24655364-24655383 Msa0245200:intron 30.0%
! CCGACAAATAATTTAGTTCA+TGG - chr2_2:24655511-24655530 Msa0245200:CDS 30.0%
TATTTCAGTCAAACTTGATG+TGG - chr2_2:24655554-24655573 Msa0245200:CDS 30.0%
!! AGCCATTTTAGTGAACATAA+TGG - chr2_2:24655586-24655605 Msa0245200:CDS 30.0%
TGCCATTATGTTCACTAAAA+TGG + chr2_2:24655591-24655610 None:intergenic 30.0%
TATGTAATTCTTAGCTCATG+TGG - chr2_2:24655624-24655643 Msa0245200:CDS 30.0%
TATGTAACCTCATTTGCTTA+CGG + chr2_2:24655729-24655748 None:intergenic 30.0%
TTCTTGTCTTCCTTAGGTTT+AGG + chr2_2:24648329-24648348 None:intergenic 35.0%
TCTTCTTTCTTGTCTTCCTT+AGG + chr2_2:24648335-24648354 None:intergenic 35.0%
! TTGATGAGAAGTACACTCAA+TGG - chr2_2:24648447-24648466 Msa0245200:three_prime_UTR 35.0%
!! TGTTTGATGGGTTGGAATTA+TGG - chr2_2:24648880-24648899 Msa0245200:intron 35.0%
AGTGTGGTTGGATTGAATTA+TGG - chr2_2:24648911-24648930 Msa0245200:intron 35.0%
TGATTTGATCCATGTAGTTG+AGG - chr2_2:24648946-24648965 Msa0245200:intron 35.0%
AAAACCAAACCTCAACTACA+TGG + chr2_2:24648958-24648977 None:intergenic 35.0%
GATGTTGTTAATGGAATGAG+AGG - chr2_2:24649321-24649340 Msa0245200:intron 35.0%
! TTCGCAATCACCAAAGTATT+CGG + chr2_2:24649403-24649422 None:intergenic 35.0%
GTCTTGTACTTCTTGACAAA+TGG + chr2_2:24649838-24649857 None:intergenic 35.0%
TACAAGACTATCATACATCC+AGG - chr2_2:24649850-24649869 Msa0245200:intron 35.0%
TATGAAATTTATACCTCGCC+TGG + chr2_2:24649871-24649890 None:intergenic 35.0%
ATAATAACCAGTCATGTCGA+TGG - chr2_2:24650003-24650022 Msa0245200:intron 35.0%
TTAGCAGTGTTGCCAAATAT+CGG + chr2_2:24650143-24650162 None:intergenic 35.0%
! ATCTTTATGCTTTGAACTGC+AGG - chr2_2:24650312-24650331 Msa0245200:intron 35.0%
!! GCCACAAAATTCTAAGATTG+TGG - chr2_2:24650354-24650373 Msa0245200:intron 35.0%
! GCCACAATCTTAGAATTTTG+TGG + chr2_2:24650358-24650377 None:intergenic 35.0%
AAATAAGGAACGAAATAGCC+AGG + chr2_2:24650460-24650479 None:intergenic 35.0%
TCGAATATCAGGTTCTCATT+TGG - chr2_2:24650488-24650507 Msa0245200:intron 35.0%
CGAATATCAGGTTCTCATTT+GGG - chr2_2:24650489-24650508 Msa0245200:intron 35.0%
TCTCATGTACAAAAGGAACA+TGG + chr2_2:24650685-24650704 None:intergenic 35.0%
AACAAAACTGCAGTGTAATC+TGG + chr2_2:24650735-24650754 None:intergenic 35.0%
AGCTCTATTGAACTGAACAA+TGG - chr2_2:24650797-24650816 Msa0245200:CDS 35.0%
GCTCTATTGAACTGAACAAT+GGG - chr2_2:24650798-24650817 Msa0245200:CDS 35.0%
CTCTATTGAACTGAACAATG+GGG - chr2_2:24650799-24650818 Msa0245200:CDS 35.0%
TCCCTCCAATTTGAATTATG+TGG - chr2_2:24650880-24650899 Msa0245200:intron 35.0%
GTCCACATAATTCAAATTGG+AGG + chr2_2:24650885-24650904 None:intergenic 35.0%
CAATATCTGCAAAAGAAGCT+CGG + chr2_2:24651018-24651037 None:intergenic 35.0%
! CTTCTTTTGCAGATATTGAC+TGG - chr2_2:24651020-24651039 Msa0245200:CDS 35.0%
TCCTTGTTCATTCATTGTGT+TGG - chr2_2:24651169-24651188 Msa0245200:intron 35.0%
ACCAACACAATGAATGAACA+AGG + chr2_2:24651173-24651192 None:intergenic 35.0%
GGTAAGCAAATTACCTAGAA+GGG + chr2_2:24651400-24651419 None:intergenic 35.0%
GTTGTTCACCTTATGAACTT+TGG - chr2_2:24651479-24651498 Msa0245200:intron 35.0%
GATTTCACCCAAAGTTCATA+AGG + chr2_2:24651490-24651509 None:intergenic 35.0%
ATGAACTTTGGGTGAAATCT+AGG - chr2_2:24651491-24651510 Msa0245200:intron 35.0%
AAAGCATATACCTTAACCAC+AGG + chr2_2:24651823-24651842 None:intergenic 35.0%
!! GGTTTAGCCTATTGTTTTTC+GGG + chr2_2:24651968-24651987 None:intergenic 35.0%
GCATGTTCTATTCATGTAGT+AGG - chr2_2:24652049-24652068 Msa0245200:intron 35.0%
!!! GGATTTTAAGGCATGCTTTT+TGG - chr2_2:24652125-24652144 Msa0245200:intron 35.0%
!! TTTAAGGCATGCTTTTTGGA+AGG - chr2_2:24652129-24652148 Msa0245200:intron 35.0%
ATTCACGAACTCATTGGAAT+AGG - chr2_2:24652238-24652257 Msa0245200:intron 35.0%
!! AAGATGATGAAGTATCGTGT+TGG - chr2_2:24652580-24652599 Msa0245200:intron 35.0%
AGAATGGGAAACTTAGCATA+AGG - chr2_2:24652673-24652692 Msa0245200:CDS 35.0%
GAATGGGAAACTTAGCATAA+GGG - chr2_2:24652674-24652693 Msa0245200:CDS 35.0%
AAACTTAGCATAAGGGAAGT+GGG - chr2_2:24652681-24652700 Msa0245200:CDS 35.0%
!! GAATTGATTCTGGAATCAGA+GGG - chr2_2:24652707-24652726 Msa0245200:CDS 35.0%
GAATCAGAGGGAGTTTATTA+GGG - chr2_2:24652719-24652738 Msa0245200:CDS 35.0%
AATCAGAGGGAGTTTATTAG+GGG - chr2_2:24652720-24652739 Msa0245200:CDS 35.0%
ACTTGCCACATTATCAATTC+AGG - chr2_2:24652906-24652925 Msa0245200:CDS 35.0%
AATAAGTCACCTGAACACAA+AGG + chr2_2:24653030-24653049 None:intergenic 35.0%
ATATAAAATGCCAGAAGACG+TGG + chr2_2:24653067-24653086 None:intergenic 35.0%
! CCAAATACAGATGATTTGTC+TGG + chr2_2:24653144-24653163 None:intergenic 35.0%
CCAGACAAATCATCTGTATT+TGG - chr2_2:24653141-24653160 Msa0245200:intron 35.0%
GCAATAAAACATAACTGGTG+TGG + chr2_2:24653251-24653270 None:intergenic 35.0%
!! AATGTCTTCTGCTTTTGTTG+TGG - chr2_2:24653279-24653298 Msa0245200:intron 35.0%
!! ATGGAGTTGGTATCAAAATG+TGG + chr2_2:24653660-24653679 None:intergenic 35.0%
ATTGGCATTTCATATGGAGT+TGG + chr2_2:24653673-24653692 None:intergenic 35.0%
GTTGGTATCAAAACTATGTG+AGG + chr2_2:24653738-24653757 None:intergenic 35.0%
AAGTTGACATCAAAATGTGG+TGG + chr2_2:24653842-24653861 None:intergenic 35.0%
TGCTATTCAAGAAAACCACT+AGG + chr2_2:24654048-24654067 None:intergenic 35.0%
!! ACAAAGTTGTTGACTTTCAC+TGG - chr2_2:24654308-24654327 Msa0245200:intron 35.0%
! TCTGATGATTGTGAAAGTAC+TGG - chr2_2:24654364-24654383 Msa0245200:intron 35.0%
AAACTGCACAAGCATACATA+TGG - chr2_2:24654492-24654511 Msa0245200:intron 35.0%
AACTGCACAAGCATACATAT+GGG - chr2_2:24654493-24654512 Msa0245200:intron 35.0%
CTGTCTGATAATCTTGTGTT+AGG - chr2_2:24654623-24654642 Msa0245200:intron 35.0%
TGTCTATCTCCAAATGGATA+AGG - chr2_2:24654752-24654771 Msa0245200:intron 35.0%
CTAACATGACTAGAAATACC+AGG + chr2_2:24654846-24654865 None:intergenic 35.0%
GGAGAAATTCAAATCTCATG+TGG - chr2_2:24655470-24655489 Msa0245200:CDS 35.0%
GAAATTCAAATCTCATGTGG+TGG - chr2_2:24655473-24655492 Msa0245200:CDS 35.0%
!! TACGGTAGAAAGCATTTCTA+GGG + chr2_2:24655711-24655730 None:intergenic 35.0%
!! TTACGGTAGAAAGCATTTCT+AGG + chr2_2:24655712-24655731 None:intergenic 35.0%
! ATGGTTTGTGATAGTGTGGT+TGG - chr2_2:24648899-24648918 Msa0245200:intron 40.0%
TGATCCATGTAGTTGAGGTT+TGG - chr2_2:24648951-24648970 Msa0245200:intron 40.0%
CTACTTACAAGAATCGTCAG+AGG - chr2_2:24649115-24649134 Msa0245200:intron 40.0%
! TCGTCAGAGGCTTTATCTTT+CGG - chr2_2:24649128-24649147 Msa0245200:intron 40.0%
!! TGGAAGTGTTCCGAATACTT+TGG - chr2_2:24649390-24649409 Msa0245200:intron 40.0%
! TTTGGTGATTGCGAATTGTG+AGG - chr2_2:24649408-24649427 Msa0245200:intron 40.0%
ATTGTGAGGTTGTGAAGACT+AGG - chr2_2:24649422-24649441 Msa0245200:intron 40.0%
TTGTGAGGTTGTGAAGACTA+GGG - chr2_2:24649423-24649442 Msa0245200:intron 40.0%
GATCTATGAAGCATAGACAC+TGG - chr2_2:24649539-24649558 Msa0245200:intron 40.0%
!! ATAACCAGTGTTGTTTACGG+CGG - chr2_2:24649944-24649963 Msa0245200:intron 40.0%
TTTGCCTGCCAATTTCGTAA+AGG + chr2_2:24650105-24650124 None:intergenic 40.0%
AACTGCAGGTGAACAGAATT+AGG - chr2_2:24650326-24650345 Msa0245200:intron 40.0%
ACTGCAGGTGAACAGAATTA+GGG - chr2_2:24650327-24650346 Msa0245200:intron 40.0%
TCAAATAGACGTACCAGATC+TGG + chr2_2:24650568-24650587 None:intergenic 40.0%
! TTGTCATGGTTGATGCTTCT+TGG - chr2_2:24650984-24651003 Msa0245200:CDS 40.0%
GAGCAAACTCTGCATTATCT+TGG + chr2_2:24651049-24651068 None:intergenic 40.0%
AAAGCACATAGGGATGAGTA+GGG + chr2_2:24651082-24651101 None:intergenic 40.0%
AAGACAAAACAGTCGTGTTG+TGG - chr2_2:24651231-24651250 Msa0245200:intron 40.0%
CTGTAGCAGCAGATGTTATA+TGG + chr2_2:24651268-24651287 None:intergenic 40.0%
!! GCTATCAGCAGTTTTGGTAA+TGG + chr2_2:24651312-24651331 None:intergenic 40.0%
! GACCAAGAGGTATATACTCT+GGG - chr2_2:24651342-24651361 Msa0245200:intron 40.0%
GGGTAAGCAAATTACCTAGA+AGG + chr2_2:24651401-24651420 None:intergenic 40.0%
! GTTGCTATTAGAGTGCAGAT+AGG + chr2_2:24651665-24651684 None:intergenic 40.0%
TCTGCACTCTAATAGCAACA+TGG - chr2_2:24651666-24651685 Msa0245200:intron 40.0%
ATATTATGGGATGCACGTGT+TGG - chr2_2:24651790-24651809 Msa0245200:intron 40.0%
TTCACTTCTGTGGTCTGATT+TGG - chr2_2:24651903-24651922 Msa0245200:intron 40.0%
! TCTGATGTGAATTTGGTGAC+AGG - chr2_2:24652397-24652416 Msa0245200:intron 40.0%
TTCTTACTGGGTATGTTTGC+CGG - chr2_2:24652483-24652502 Msa0245200:intron 40.0%
GAAACTTAGCATAAGGGAAG+TGG - chr2_2:24652680-24652699 Msa0245200:CDS 40.0%
!! GGAATTGATTCTGGAATCAG+AGG - chr2_2:24652706-24652725 Msa0245200:CDS 40.0%
GGAATCAGAGGGAGTTTATT+AGG - chr2_2:24652718-24652737 Msa0245200:CDS 40.0%
GCCACATTATCAATTCAGGT+CGG - chr2_2:24652910-24652929 Msa0245200:CDS 40.0%
GTCGCAATCTCACTTCTAAT+GGG - chr2_2:24652960-24652979 Msa0245200:intron 40.0%
TCGCAATCTCACTTCTAATG+GGG - chr2_2:24652961-24652980 Msa0245200:intron 40.0%
AATCTCACTTCTAATGGGGT+TGG - chr2_2:24652965-24652984 Msa0245200:intron 40.0%
ATCTCACTTCTAATGGGGTT+GGG - chr2_2:24652966-24652985 Msa0245200:intron 40.0%
GTCTCCTATCCACAAATTTG+AGG - chr2_2:24652988-24653007 Msa0245200:intron 40.0%
TGAGCCTCAAATTTGTGGAT+AGG + chr2_2:24652995-24653014 None:intergenic 40.0%
CCTTATGAGCCTCAAATTTG+TGG + chr2_2:24653000-24653019 None:intergenic 40.0%
! CCACAAATTTGAGGCTCATA+AGG - chr2_2:24652997-24653016 Msa0245200:intron 40.0%
TTTGGAAGTTCAGCAGAAGA+TGG - chr2_2:24653159-24653178 Msa0245200:intron 40.0%
! TTTTCCAACATGCTGGTCAT+AGG - chr2_2:24653361-24653380 Msa0245200:intron 40.0%
AAGTCAGCTACAGATCTAGA+TGG + chr2_2:24653456-24653475 None:intergenic 40.0%
!! GAGTTGGTATCAAAATGTGG+TGG + chr2_2:24653657-24653676 None:intergenic 40.0%
! GTTTCTAGGAAGACTGTGTT+TGG + chr2_2:24653941-24653960 None:intergenic 40.0%
!! TAAAGATAGCATCGACCTAG+TGG - chr2_2:24654030-24654049 Msa0245200:intron 40.0%
! TAGCATTTTGTGTCATCCTC+AGG - chr2_2:24654063-24654082 Msa0245200:intron 40.0%
TGAAATAACAAGGTCAGGCA+AGG + chr2_2:24654251-24654270 None:intergenic 40.0%
!! GATGATTGTGAAAGTACTGG+TGG - chr2_2:24654367-24654386 Msa0245200:intron 40.0%
!! ATTGTGAAAGTACTGGTGGA+GGG - chr2_2:24654371-24654390 Msa0245200:intron 40.0%
CCATTTCTTGAGAAATGGAG+AGG + chr2_2:24654651-24654670 None:intergenic 40.0%
CCTCTCCATTTCTCAAGAAA+TGG - chr2_2:24654648-24654667 Msa0245200:intron 40.0%
GCTCTCCATTTCTTGAGAAA+TGG + chr2_2:24654656-24654675 None:intergenic 40.0%
GAGTTGAGACCTTATCCATT+TGG + chr2_2:24654764-24654783 None:intergenic 40.0%
GTCTCAACTCTTGAAAGACA+GGG - chr2_2:24654774-24654793 Msa0245200:intron 40.0%
! CTCCTTGTGCTTTTCATTCA+TGG - chr2_2:24654808-24654827 Msa0245200:intron 40.0%
! TGCCATGAATGAAAAGCACA+AGG + chr2_2:24654813-24654832 None:intergenic 40.0%
!! TAGAAATACCAGGAAGTGCT+TGG + chr2_2:24654836-24654855 None:intergenic 40.0%
TACAAATTACTGCTCTCCCT+CGG + chr2_2:24654908-24654927 None:intergenic 40.0%
AGTAAATGCACTCTGCGTAT+TGG - chr2_2:24655032-24655051 Msa0245200:intron 40.0%
AAGAGGGAAAAGTGACAACA+CGG + chr2_2:24655063-24655082 None:intergenic 40.0%
GTGGAGATTGGAGAATGATT+AGG - chr2_2:24655676-24655695 Msa0245200:CDS 40.0%
CTTTCTACCGTAAGCAAATG+AGG - chr2_2:24655719-24655738 Msa0245200:exon 40.0%
! CAGAGAGAGTGTGAGAGAAA+TGG - chr2_2:24648250-24648269 Msa0245200:three_prime_UTR 45.0%
GTGAAGAAGAAGGAGACAAG+AGG - chr2_2:24648296-24648315 Msa0245200:three_prime_UTR 45.0%
AGGACGCAAACCTAAACCTA+AGG - chr2_2:24648316-24648335 Msa0245200:three_prime_UTR 45.0%
GACACCGAAAGAATCGAAGA+AGG - chr2_2:24648376-24648395 Msa0245200:three_prime_UTR 45.0%
GCGAGCCAATCATAAAGAAC+AGG + chr2_2:24648485-24648504 None:intergenic 45.0%
TCGCTAACCATAACCTCGTT+TGG - chr2_2:24648501-24648520 Msa0245200:CDS 45.0%
TAAGTAGCCTGTTCAAGCTG+AGG + chr2_2:24649102-24649121 None:intergenic 45.0%
ACTTGACTAACCTCACGTGT+TGG - chr2_2:24649621-24649640 Msa0245200:CDS 45.0%
TGTTGGTGTAGATCACGTGT+TGG - chr2_2:24649651-24649670 Msa0245200:CDS 45.0%
ATAACCAGTCATGTCGATGG+CGG - chr2_2:24650006-24650025 Msa0245200:intron 45.0%
AATCCAAACGCCCGCAATAT+CGG - chr2_2:24650030-24650049 Msa0245200:intron 45.0%
CATGGCACCATACTCAGATA+TGG + chr2_2:24650072-24650091 None:intergenic 45.0%
! CATATCTGAGTATGGTGCCA+TGG - chr2_2:24650070-24650089 Msa0245200:intron 45.0%
ACCGCCATCCTTTACGAAAT+TGG - chr2_2:24650094-24650113 Msa0245200:intron 45.0%
GCCAATTTCGTAAAGGATGG+CGG + chr2_2:24650098-24650117 None:intergenic 45.0%
CCTGCCAATTTCGTAAAGGA+TGG + chr2_2:24650101-24650120 None:intergenic 45.0%
CCATCCTTTACGAAATTGGC+AGG - chr2_2:24650098-24650117 Msa0245200:intron 45.0%
TTGCCAAATATCGGACATGG+TGG + chr2_2:24650134-24650153 None:intergenic 45.0%
GTGTTGCCAAATATCGGACA+TGG + chr2_2:24650137-24650156 None:intergenic 45.0%
TCTTGTTCCTTGACATGCCT+TGG - chr2_2:24650165-24650184 Msa0245200:intron 45.0%
AACGAATCCAAGGCATGTCA+AGG + chr2_2:24650175-24650194 None:intergenic 45.0%
TACAAACTCTCGTCCAGATC+TGG - chr2_2:24650552-24650571 Msa0245200:intron 45.0%
ACTGAACAATGGGGTAGAAC+AGG - chr2_2:24650808-24650827 Msa0245200:CDS 45.0%
CTGAACAATGGGGTAGAACA+GGG - chr2_2:24650809-24650828 Msa0245200:CDS 45.0%
! GAAAGCACATAGGGATGAGT+AGG + chr2_2:24651083-24651102 None:intergenic 45.0%
ACTCATCCCTATGTGCTTTC+TGG - chr2_2:24651083-24651102 Msa0245200:intron 45.0%
! CAACCTCCAGAAAGCACATA+GGG + chr2_2:24651092-24651111 None:intergenic 45.0%
AATGGATCCACCAGACTTGT+TGG + chr2_2:24651294-24651313 None:intergenic 45.0%
! AGTAGGGCTATCAGCAGTTT+TGG + chr2_2:24651318-24651337 None:intergenic 45.0%
! GGACCAAGAGGTATATACTC+TGG - chr2_2:24651341-24651360 Msa0245200:intron 45.0%
TGCCCAGAGTATATACCTCT+TGG + chr2_2:24651347-24651366 None:intergenic 45.0%
AGGTATATACTCTGGGCATG+AGG - chr2_2:24651349-24651368 Msa0245200:intron 45.0%
TGAGGATACTGTTGAAGACG+TGG - chr2_2:24651367-24651386 Msa0245200:intron 45.0%
ATTATCATCCTGAAGTGCGC+AGG - chr2_2:24651735-24651754 Msa0245200:intron 45.0%
AGAGCAGCATTATGCTGCTA+AGG + chr2_2:24651876-24651895 None:intergenic 45.0%
TCTGCTTTGCTTCACTTCTG+TGG - chr2_2:24651893-24651912 Msa0245200:intron 45.0%
AGGGAGACCCGAAAAACAAT+AGG - chr2_2:24651958-24651977 Msa0245200:intron 45.0%
! CTGATCTTCACTGTGTTGAC+TGG - chr2_2:24652438-24652457 Msa0245200:intron 45.0%
TTGGATCCACGTATGTTAGC+AGG - chr2_2:24652599-24652618 Msa0245200:intron 45.0%
TCCACGTATGTTAGCAGGAT+AGG - chr2_2:24652604-24652623 Msa0245200:CDS 45.0%
TCCTATCCTGCTAACATACG+TGG + chr2_2:24652608-24652627 None:intergenic 45.0%
GTATGTTAGCAGGATAGGAG+AGG - chr2_2:24652609-24652628 Msa0245200:CDS 45.0%
TTAGCATAAGGGAAGTGGGT+GGG - chr2_2:24652685-24652704 Msa0245200:CDS 45.0%
! AAGTGGGTGGGAATTGATTC+TGG - chr2_2:24652697-24652716 Msa0245200:CDS 45.0%
! AGGGAGTTTATTAGGGGTGT+AGG - chr2_2:24652726-24652745 Msa0245200:CDS 45.0%
!! GCCGACCTGAATTGATAATG+TGG + chr2_2:24652914-24652933 None:intergenic 45.0%
CGTCGCAATCTCACTTCTAA+TGG - chr2_2:24652959-24652978 Msa0245200:intron 45.0%
!! CTTCTGCTTTTGTTGTGGTC+AGG - chr2_2:24653284-24653303 Msa0245200:intron 45.0%
!! TGCTTTTGTTGTGGTCAGGT+TGG - chr2_2:24653288-24653307 Msa0245200:intron 45.0%
TGTTGGAAAAACAACCCTGG+AGG + chr2_2:24653351-24653370 None:intergenic 45.0%
GCATGTTGGAAAAACAACCC+TGG + chr2_2:24653354-24653373 None:intergenic 45.0%
!!! GGGTTGTTTTTCCAACATGC+TGG - chr2_2:24653354-24653373 Msa0245200:intron 45.0%
AGTCGAATGAAAGCAACCTG+AGG + chr2_2:24654082-24654101 None:intergenic 45.0%
ACTGGAATGCACATGATCCA+TGG - chr2_2:24654326-24654345 Msa0245200:intron 45.0%
GACACACTAACAAGTGTCCA+TGG + chr2_2:24654346-24654365 None:intergenic 45.0%
!! GATTGTGAAAGTACTGGTGG+AGG - chr2_2:24654370-24654389 Msa0245200:intron 45.0%
!! TTGTGAAAGTACTGGTGGAG+GGG - chr2_2:24654372-24654391 Msa0245200:intron 45.0%
CTTGTGCAGTTTCAACAAGC+AGG + chr2_2:24654484-24654503 None:intergenic 45.0%
GGTCTCAACTCTTGAAAGAC+AGG - chr2_2:24654773-24654792 Msa0245200:intron 45.0%
! GTTAGTTGGAGCACTCATAG+TGG - chr2_2:24654861-24654880 Msa0245200:CDS 45.0%
! AGCTTTAGTGCTTGAACCGA+GGG - chr2_2:24654889-24654908 Msa0245200:CDS 45.0%
!! TGATTTGCTCTACAGACCAG+AGG - chr2_2:24655428-24655447 Msa0245200:intron 45.0%
TCATGTGGATCCATTCTCAC+TGG - chr2_2:24655639-24655658 Msa0245200:CDS 45.0%
CATGTTCTGTCCAGTGAGAA+TGG + chr2_2:24655652-24655671 None:intergenic 45.0%
TCTCACTGGACAGAACATGT+AGG - chr2_2:24655653-24655672 Msa0245200:CDS 45.0%
CTCACTGGACAGAACATGTA+GGG - chr2_2:24655654-24655673 Msa0245200:CDS 45.0%
AGAACATGTAGGGTGGAGAT+TGG - chr2_2:24655664-24655683 Msa0245200:CDS 45.0%
!!! TAAATCTTAATATTTTTTAA+TGG + chr2_2:24651989-24652008 None:intergenic 5.0%
!!! ATATTTTAAAAATTTAATGA+TGG - chr2_2:24654705-24654724 Msa0245200:intron 5.0%
ATGGAGACACCACCATCAAC+CGG - chr2_2:24648269-24648288 Msa0245200:three_prime_UTR 50.0%
GAGAAGGCCAAACGAGGTTA+TGG + chr2_2:24648511-24648530 None:intergenic 50.0%
AAGAGAGAGAAGGCCAAACG+AGG + chr2_2:24648517-24648536 None:intergenic 50.0%
! TTTGGCCTTCTCTCTCTTGC+CGG - chr2_2:24648519-24648538 Msa0245200:CDS 50.0%
! CTTCTCTCTCTTGCCGGTTA+GGG - chr2_2:24648525-24648544 Msa0245200:CDS 50.0%
! GAGGCTTTATCTTTCGGAGC+AGG - chr2_2:24649134-24649153 Msa0245200:intron 50.0%
AGCTGCTGAGCACATTTCTC+AGG - chr2_2:24649450-24649469 Msa0245200:intron 50.0%
GCACCAACACATGTCGTACA+CGG - chr2_2:24649710-24649729 Msa0245200:intron 50.0%
CACCAACACATGTCGTACAC+GGG - chr2_2:24649711-24649730 Msa0245200:intron 50.0%
ACACCTTCAATCTGGAGGCT+TGG - chr2_2:24649736-24649755 Msa0245200:intron 50.0%
CACCTTCAATCTGGAGGCTT+GGG - chr2_2:24649737-24649756 Msa0245200:intron 50.0%
ACCTTCAATCTGGAGGCTTG+GGG - chr2_2:24649738-24649757 Msa0245200:intron 50.0%
GACTATCATACATCCAGGCG+AGG - chr2_2:24649855-24649874 Msa0245200:intron 50.0%
ATCTCCGCCGTAAACAACAC+TGG + chr2_2:24649951-24649970 None:intergenic 50.0%
ATTTCCGCCATCGACATGAC+TGG + chr2_2:24650013-24650032 None:intergenic 50.0%
CACATGTCAGCCGATATTGC+GGG + chr2_2:24650043-24650062 None:intergenic 50.0%
CCACATGTCAGCCGATATTG+CGG + chr2_2:24650044-24650063 None:intergenic 50.0%
GGCACCATACTCAGATATGG+CGG + chr2_2:24650069-24650088 None:intergenic 50.0%
TAGCTCCAAGGACAGCATGA+CGG + chr2_2:24650534-24650553 None:intergenic 50.0%
GACGAGAGTTTGTAGCTCCA+AGG + chr2_2:24650546-24650565 None:intergenic 50.0%
AATGGGGTAGAACAGGGCTT+GGG - chr2_2:24650815-24650834 Msa0245200:CDS 50.0%
CATCCCTATGTGCTTTCTGG+AGG - chr2_2:24651086-24651105 Msa0245200:intron 50.0%
! CCAACCTCCAGAAAGCACAT+AGG + chr2_2:24651093-24651112 None:intergenic 50.0%
! CCTATGTGCTTTCTGGAGGT+TGG - chr2_2:24651090-24651109 Msa0245200:intron 50.0%
GCTACAGACTCCAACAAGTC+TGG - chr2_2:24651281-24651300 Msa0245200:intron 50.0%
ACAGACTCCAACAAGTCTGG+TGG - chr2_2:24651284-24651303 Msa0245200:intron 50.0%
ACTGCTGATAGCCCTACTGT+CGG - chr2_2:24651320-24651339 Msa0245200:intron 50.0%
TACCTCTTGGTCCGACAGTA+GGG + chr2_2:24651334-24651353 None:intergenic 50.0%
ATACCTCTTGGTCCGACAGT+AGG + chr2_2:24651335-24651354 None:intergenic 50.0%
! ACGTGGCTTTTTGCCCTTCT+AGG - chr2_2:24651384-24651403 Msa0245200:intron 50.0%
!! TGGCTCTAGTCCTGTGGTTA+AGG - chr2_2:24651810-24651829 Msa0245200:intron 50.0%
CTTAGCATAAGGGAAGTGGG+TGG - chr2_2:24652684-24652703 Msa0245200:CDS 50.0%
CCAGAAGACGTGGAAAAGCA+TGG + chr2_2:24653057-24653076 None:intergenic 50.0%
! CCATGCTTTTCCACGTCTTC+TGG - chr2_2:24653054-24653073 Msa0245200:intron 50.0%
CGTACCTATGACCAGCATGT+TGG + chr2_2:24653368-24653387 None:intergenic 50.0%
GAGAGAGAGAGAGAGACAGT+AGG + chr2_2:24653393-24653412 None:intergenic 50.0%
!! TGTGAAAGTACTGGTGGAGG+GGG - chr2_2:24654373-24654392 Msa0245200:intron 50.0%
! CAGCTTTAGTGCTTGAACCG+AGG - chr2_2:24654888-24654907 Msa0245200:CDS 50.0%
! CAGACCAGAGGATGAGGTTT+TGG - chr2_2:24655440-24655459 Msa0245200:intron 50.0%
TCTGCCAAAACCTCATCCTC+TGG + chr2_2:24655447-24655466 None:intergenic 50.0%
ACTGGACAGAACATGTAGGG+TGG - chr2_2:24655657-24655676 Msa0245200:CDS 50.0%
!! TTCTTCACTGCGCCGGTTGA+TGG + chr2_2:24648284-24648303 None:intergenic 55.0%
AACCGGCGCAGTGAAGAAGA+AGG - chr2_2:24648286-24648305 Msa0245200:three_prime_UTR 55.0%
CTCCTTCTTCTTCACTGCGC+CGG + chr2_2:24648291-24648310 None:intergenic 55.0%
CCTAACCGGCAAGAGAGAGA+AGG + chr2_2:24648527-24648546 None:intergenic 55.0%
! CCTTCTCTCTCTTGCCGGTT+AGG - chr2_2:24648524-24648543 Msa0245200:CDS 55.0%
ACACACGTCACCAACACGTG+AGG + chr2_2:24649634-24649653 None:intergenic 55.0%
!! CACGTGTTGGTGACGTGTGT+TGG - chr2_2:24649634-24649653 Msa0245200:CDS 55.0%
! TGCACCTCACGTGTTGGTGT+TGG - chr2_2:24649687-24649706 Msa0245200:intron 55.0%
! GCACCTCACGTGTTGGTGTT+GGG - chr2_2:24649688-24649707 Msa0245200:intron 55.0%
GTCCCGTGTACGACATGTGT+TGG + chr2_2:24649716-24649735 None:intergenic 55.0%
CACGGGACACACCTTCAATC+TGG - chr2_2:24649728-24649747 Msa0245200:intron 55.0%
GGGACACACCTTCAATCTGG+AGG - chr2_2:24649731-24649750 Msa0245200:intron 55.0%
ACCCCAAGCCTCCAGATTGA+AGG + chr2_2:24649742-24649761 None:intergenic 55.0%
! CCGCAATATCGGCTGACATG+TGG - chr2_2:24650041-24650060 Msa0245200:intron 55.0%
GCGCCACCATGTCCGATATT+TGG - chr2_2:24650128-24650147 Msa0245200:intron 55.0%
ATCAGGGCTGTCTGTGTGAG+TGG + chr2_2:24650380-24650399 None:intergenic 55.0%
CCAAGGACAGCATGACGGTT+AGG + chr2_2:24650529-24650548 None:intergenic 55.0%
CCTAACCGTCATGCTGTCCT+TGG - chr2_2:24650526-24650545 Msa0245200:intron 55.0%
CAATGGGGTAGAACAGGGCT+TGG - chr2_2:24650814-24650833 Msa0245200:CDS 55.0%
ATGGGGTAGAACAGGGCTTG+GGG - chr2_2:24650816-24650835 Msa0245200:CDS 55.0%
ACAGAACTCCTGCGCACTTC+AGG + chr2_2:24651746-24651765 None:intergenic 55.0%
GCGCAGGAGTTCTGTAGTGT+TGG - chr2_2:24651751-24651770 Msa0245200:intron 55.0%
!! ACGTGTTGGCTCTAGTCCTG+TGG - chr2_2:24651804-24651823 Msa0245200:intron 55.0%
GGCTGCTGTCCTTTGTGTTC+AGG - chr2_2:24653018-24653037 Msa0245200:intron 55.0%
GGCAAGAAGATAGAGCGAGC+TGG - chr2_2:24653309-24653328 Msa0245200:intron 55.0%
TCATGGCACCAAGCACTTCC+TGG - chr2_2:24654825-24654844 Msa0245200:intron 55.0%
GCTCTACAGACCAGAGGATG+AGG - chr2_2:24655434-24655453 Msa0245200:intron 55.0%
!! GGATGAGGTTTTGGCAGAGC+TGG - chr2_2:24655449-24655468 Msa0245200:intron 55.0%
!! TTCACTGCGCCGGTTGATGG+TGG + chr2_2:24648281-24648300 None:intergenic 60.0%
GTGGGGTCCTCAGCTTGAAC+AGG - chr2_2:24649092-24649111 Msa0245200:intron 60.0%
! CACGTGTTGGTGTGCCACGT+TGG - chr2_2:24649664-24649683 Msa0245200:CDS 60.0%
ACACGTGAGGTGCACCAACG+TGG + chr2_2:24649681-24649700 None:intergenic 60.0%
CGTTGGTGCACCTCACGTGT+TGG - chr2_2:24649681-24649700 Msa0245200:CDS 60.0%
GTGCCCAACACCAACACGTG+AGG + chr2_2:24649694-24649713 None:intergenic 60.0%
CAGCCGATATTGCGGGCGTT+TGG + chr2_2:24650036-24650055 None:intergenic 60.0%
GGCGCCGCCATATCTGAGTA+TGG - chr2_2:24650062-24650081 Msa0245200:intron 60.0%
! CGTAAAGGATGGCGGTGCCA+TGG + chr2_2:24650090-24650109 None:intergenic 60.0%
TGGGGTAGAACAGGGCTTGG+GGG - chr2_2:24650817-24650836 Msa0245200:CDS 60.0%
AGCCCTACTGTCGGACCAAG+AGG - chr2_2:24651329-24651348 Msa0245200:intron 60.0%
TGGTGGAGGGGGAACATTGC+AGG - chr2_2:24654384-24654403 Msa0245200:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 24648195 24655811 24648195 ID=Msa0245200;Name=Msa0245200
chr2_2 mRNA 24648195 24655811 24648195 ID=Msa0245200-mRNA-1;Parent=Msa0245200;Name=Msa0245200-mRNA-1;_AED=0.11;_eAED=0.11;_QI=74|1|1|1|1|1|15|290|502
chr2_2 exon 24648195 24648592 24648195 ID=Msa0245200-mRNA-1:exon:9348;Parent=Msa0245200-mRNA-1
chr2_2 exon 24649601 24649700 24649601 ID=Msa0245200-mRNA-1:exon:9347;Parent=Msa0245200-mRNA-1
chr2_2 exon 24650624 24650700 24650624 ID=Msa0245200-mRNA-1:exon:9346;Parent=Msa0245200-mRNA-1
chr2_2 exon 24650797 24650871 24650797 ID=Msa0245200-mRNA-1:exon:9345;Parent=Msa0245200-mRNA-1
chr2_2 exon 24650967 24651078 24650967 ID=Msa0245200-mRNA-1:exon:9344;Parent=Msa0245200-mRNA-1
chr2_2 exon 24651514 24651587 24651514 ID=Msa0245200-mRNA-1:exon:9343;Parent=Msa0245200-mRNA-1
chr2_2 exon 24652175 24652256 24652175 ID=Msa0245200-mRNA-1:exon:9342;Parent=Msa0245200-mRNA-1
chr2_2 exon 24652601 24652778 24652601 ID=Msa0245200-mRNA-1:exon:9341;Parent=Msa0245200-mRNA-1
chr2_2 exon 24652899 24652974 24652899 ID=Msa0245200-mRNA-1:exon:9340;Parent=Msa0245200-mRNA-1
chr2_2 exon 24653433 24653507 24653433 ID=Msa0245200-mRNA-1:exon:9339;Parent=Msa0245200-mRNA-1
chr2_2 exon 24653607 24653672 24653607 ID=Msa0245200-mRNA-1:exon:9338;Parent=Msa0245200-mRNA-1
chr2_2 exon 24654130 24654192 24654130 ID=Msa0245200-mRNA-1:exon:9337;Parent=Msa0245200-mRNA-1
chr2_2 exon 24654535 24654621 24654535 ID=Msa0245200-mRNA-1:exon:9336;Parent=Msa0245200-mRNA-1
chr2_2 exon 24654851 24654914 24654851 ID=Msa0245200-mRNA-1:exon:9335;Parent=Msa0245200-mRNA-1
chr2_2 exon 24655466 24655811 24655466 ID=Msa0245200-mRNA-1:exon:9334;Parent=Msa0245200-mRNA-1
chr2_2 five_prime_UTR 24655738 24655811 24655738 ID=Msa0245200-mRNA-1:five_prime_utr;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24655466 24655737 24655466 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24654851 24654914 24654851 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24654535 24654621 24654535 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24654130 24654192 24654130 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24653607 24653672 24653607 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24653433 24653507 24653433 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24652899 24652974 24652899 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24652601 24652778 24652601 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24652175 24652256 24652175 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24651514 24651587 24651514 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24650967 24651078 24650967 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24650797 24650871 24650797 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24650624 24650700 24650624 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24649601 24649700 24649601 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 CDS 24648485 24648592 24648485 ID=Msa0245200-mRNA-1:cds;Parent=Msa0245200-mRNA-1
chr2_2 three_prime_UTR 24648195 24648484 24648195 ID=Msa0245200-mRNA-1:three_prime_utr;Parent=Msa0245200-mRNA-1
Gene Sequence

>Msa0245200

ATGGAGACACCACCATCAACCGGCGCAGTGAAGAAGAAGGAGACAAGAGGACGCAAACCTAAACCTAAGGAAGACAAGAAAGAAGAACAATCACAACAACAAGTGAAGACACCGAAAGAATCGAAGAAGGAAAAGCAGCAGCAACAGCTTCATCAGCAGCAGCAACAACAAGCTTCTGTTGATGAGAAGTACACTCAATGGAAATCTCTTGTTCCTGTTCTTTATGATTGGCTCGCTAACCATAACCTCGTTTGGCCTTCTCTCTCTTGCCGGTGGGGTCCTCAGCTTGAACAGGCTACTTACAAGAATCGTCAGAGGCTTTATCTTTCGGAGCAGACTGATGGAAGTGTTCCGAATACTTTGGTGATTGCGAATTGTGAGGTTGTGAAGACTAGGGTTGCAGCTGCTGAGCACATTTCTCAGTTTAATGAAGAGGCTCGCTCTCCATTTGTCAAGAAGTACAAGACTATCATACATCCAGGCGAGGTGAACAGAATTAGGGAATTGCCACAAAATTCTAAGATTGTGGCCACTCACACAGACAGCCCTGATGTTCTCATTTGGGATGTTGAGAGTCAACCTAACCGTCATGCTGTCCTTGGAGCTACAAACTCTCGTCCAGATCTGATATTGACTGGACACCAAGATAATGCAGAGTTTGCTCTTGCAATGTGCCCTACTCATCCCTATGTGCTTTCTGGAGGAAAAGACAAAACAGTCGTGTTGTGGAGTATTGAAGACCATATAACATCTGCTGCTACAGACTCCAACAAGTCTGGTGGATCCATTACCAAAACTGCTGATAGCCCTACTGTCGGACCAAGAGGTATATACTCTGGGCATGAGGATACTGTTGAAGACGTGGCTTTTTGCCCTTCTAGTGCGCAGGAGTTCTGTAGTGTTGGAGATGATTCTTGTCTCATATTATGGGATGCACGTGTTGGCTCTAGTCCTGTGGTTAAGGTTGAAAAAGCTCACGATGCTGATCTTCACTGTGTTGACTGGAATCCCCATGATGATAATCTGATTCTTACTGGGTCGGCAGATAATTCTGTTCGCATGTTTGATCGTCGCAATCTCACTTCTAATGGGGTTGGGTCTCCTATCCACAAATTTGAGGCTCATAAGGCTGCTGTCCTTTGTGTTCAGTGGTCTCCAGACAAATCATCTGTATTTGGAAGTTCAGCAGAAGATGGTCTCTTGAACATTTGGGATTATGAGAAGGTTGGCAAGAAGATAGAGCGAGCTGGAAAAACAATAAATTCTCCTCCAGGGTTGTTTTTCCAACATGCTGGTCATAGAGACAAAGTTGTTGACTTTCACTGGAATGCACATGATCCATGGACACTTGTTAGTGTGTCTGATGATTGTGAAAGTACTGGTGGAGGGGGAACATTGCAGATATGGCGCATGAGTGATTTGCTCTACAGACCAGAGGATGAGGTTTTGGCAGAGCTGGAGAAATTCAAATCTCATGTGGTGGCTTGTGCAGCAAAGACCGACAAATAA

Protein sequence

>Msa0245200

METPPSTGAVKKKETRGRKPKPKEDKKEEQSQQQVKTPKESKKEKQQQQLHQQQQQQASVDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTHPYVLSGGKDKTVVLWSIEDHITSAATDSNKSGGSITKTADSPTVGPRGIYSGHEDTVEDVAFCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSVRMFDRRNLTSNGVGSPIHKFEAHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERAGKTINSPPGLFFQHAGHRDKVVDFHWNAHDPWTLVSVSDDCESTGGGGTLQIWRMSDLLYRPEDEVLAELEKFKSHVVACAAKTDK*