AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0036870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036870 MtrunA17_Chr1g0193431 97.551 735 18 0 1 735 1 735 0.0 1488
Msa0036870 MtrunA17_Chr1g0209631 32.470 502 322 7 225 710 269 769 2.32e-68 240
Msa0036870 MtrunA17_Chr8g0337411 26.457 223 133 7 227 428 55 267 1.30e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0036870 AT5G26710.1 73.029 723 182 5 8 729 6 716 0.0 1120
Msa0036870 AT1G25350.1 30.874 515 314 9 225 710 269 770 2.54e-65 232
Msa0036870 AT1G25350.2 29.231 520 321 10 225 710 269 775 9.63e-57 207

Find 199 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTATAAATTTACTATTT+TGG 0.058330 1_1:-65705923 Msa0036870:five_prime_UTR
CTTATAAGCAACCTTGTATT+TGG 0.081771 1_1:-65700781 Msa0036870:three_prime_UTR
TGAATGACAAGTTGGTAATT+TGG 0.186865 1_1:-65700853 Msa0036870:three_prime_UTR
GGCAAGCTTCTAAATCATTT+TGG 0.193516 1_1:+65705527 None:intergenic
CTTCTATGGTTTGTCCAAAA+TGG 0.200426 1_1:-65702761 Msa0036870:CDS
AACAAATGCTCCACGAAATT+TGG 0.200717 1_1:+65705597 None:intergenic
TTGACGACTGGCTGGTCTTT+TGG 0.223662 1_1:+65703604 None:intergenic
ATACTTGTTCAACAATAAAT+TGG 0.225280 1_1:+65702657 None:intergenic
TTGAGGAGAATTTGAAATTA+TGG 0.240284 1_1:-65703126 Msa0036870:CDS
CTTCTCTACTTCCTTTACTA+TGG 0.253996 1_1:+65702172 None:intergenic
CAATTGCAGATCTAGCTATC+TGG 0.284055 1_1:-65704211 Msa0036870:CDS
ATGCTTAAGATTTCGCATAT+TGG 0.287494 1_1:+65701015 None:intergenic
TGGAGAGAATCCGGCGAGTT+TGG 0.288324 1_1:+65705751 None:intergenic
GGATGTTTCTGATAACATTA+AGG 0.292494 1_1:-65703557 Msa0036870:CDS
GTCAATAATCTTCTTATTGA+TGG 0.298193 1_1:+65702418 None:intergenic
TTACCTCATTACGAAGAAAA+AGG 0.308169 1_1:-65702018 Msa0036870:intron
TCAGCAAACGAAAGCTTCTA+TGG 0.315812 1_1:-65702775 Msa0036870:CDS
GCTATCTGGGCAGGTCTTGC+AGG 0.316994 1_1:-65704197 Msa0036870:intron
CGAATTTAGCCGGTTGAATA+TGG 0.317857 1_1:-65702810 Msa0036870:CDS
CCAATGCCTCATCATAGAAT+TGG 0.320420 1_1:-65702992 Msa0036870:CDS
AGAAATGTGGGGACGGAATC+AGG 0.323152 1_1:+65705707 None:intergenic
AGATTACTTCCCTGAGTTGA+TGG 0.323642 1_1:-65703263 Msa0036870:CDS
GCAACCCTTCCTAATTTCTA+TGG 0.324310 1_1:-65705550 Msa0036870:CDS
TGGAGAGAAAGGGATATTTC+AGG 0.324909 1_1:-65700976 Msa0036870:CDS
CGCAATGACAGCAGTGTGTC+TGG 0.330957 1_1:+65702385 None:intergenic
GATGTCTGCTGCCTGCCATC+TGG 0.343011 1_1:+65700902 None:intergenic
ATCGTAATGCTCAGTATTAC+AGG 0.345722 1_1:-65702871 Msa0036870:CDS
TAACCAACTTCTTATTATTA+CGG 0.346651 1_1:+65705897 None:intergenic
TGAAGATAGCCACTGGGTTC+AGG 0.349425 1_1:+65703463 None:intergenic
TCAAATTCTCCTCAACACTA+TGG 0.354098 1_1:+65703134 None:intergenic
AAGCTACCACATATACAAAA+AGG 0.360107 1_1:-65702268 Msa0036870:CDS
TTATAAGCAACCTTGTATTT+GGG 0.373335 1_1:-65700780 Msa0036870:three_prime_UTR
ATTAGTTAGCCTGACATTGA+TGG 0.381393 1_1:-65702048 Msa0036870:CDS
GCCGCCGCGCCACCGTTAGC+GGG 0.385971 1_1:-65705785 Msa0036870:CDS
GAAGTCACAGCAACATATAT+TGG 0.387411 1_1:-65703661 Msa0036870:CDS
CGCTAACGGTGGCGCGGCGG+CGG 0.401265 1_1:+65705787 None:intergenic
ACCCTGTGACATTCCCATCT+TGG 0.408163 1_1:+65702147 None:intergenic
TCATGGAATGGGACAAGCTC+TGG 0.411380 1_1:-65702442 Msa0036870:CDS
CGCCGCCGCGCCACCGTTAG+CGG 0.413693 1_1:-65705786 Msa0036870:CDS
GGAAGGGAGGTGTCGATGGA+TGG 0.416190 1_1:+65705731 None:intergenic
GGAAGTAACCTTGATGGATT+GGG 0.417880 1_1:-65702201 Msa0036870:CDS
ATAAAAGATGTTGAGACGTT+GGG 0.418362 1_1:-65703316 Msa0036870:CDS
AGTATTGCAGCTGGAGAGAA+AGG 0.419290 1_1:-65700987 Msa0036870:CDS
AGTTGGATACACTTTATACT+TGG 0.420137 1_1:+65702967 None:intergenic
CGGTGGCGCGGCGGCGGAGA+AGG 0.420664 1_1:+65705793 None:intergenic
CCACATTTCTCTTGTCCAAC+GGG 0.422646 1_1:-65705694 Msa0036870:intron
GATAAAGTAAAGAATGTGAA+TGG 0.423094 1_1:-65703580 Msa0036870:CDS
ACACGATTGGTTTCGAAGGC+CGG 0.426191 1_1:+65700936 None:intergenic
GGATCACGGAGTGATTTGTT+TGG 0.426882 1_1:+65703034 None:intergenic
GATGTTTCTGATAACATTAA+GGG 0.428888 1_1:-65703556 Msa0036870:CDS
GAATGCCAAACAGTGCCATC+AGG 0.433961 1_1:-65700678 Msa0036870:three_prime_UTR
AATTCATTACTTTCTTTAGC+AGG 0.435143 1_1:+65703352 None:intergenic
AAAATGGAAAAGTTGAATCA+TGG 0.436219 1_1:-65702745 Msa0036870:CDS
AGGAAGTAACCTTGATGGAT+TGG 0.439791 1_1:-65702202 Msa0036870:CDS
GGTAATTTGGATAGCTATTG+TGG 0.450186 1_1:-65700840 Msa0036870:three_prime_UTR
GATCTTCCAGCTGCTGAAGT+TGG 0.450726 1_1:-65703508 Msa0036870:CDS
AAATGATTTAGAAGCTTGCC+AGG 0.451118 1_1:-65705524 Msa0036870:intron
CCACAAAACTGAAGCTCACT+TGG 0.452027 1_1:-65702088 Msa0036870:CDS
CTTCCCTGAGTTGATGGAAC+TGG 0.453446 1_1:-65703257 Msa0036870:CDS
TTATGGAAGGAAATGATTGC+AGG 0.457763 1_1:-65703109 Msa0036870:CDS
GTCGATGGATGGAGAGAATC+CGG 0.460388 1_1:+65705742 None:intergenic
ATAAAGTAAAGAATGTGAAT+GGG 0.460399 1_1:-65703579 Msa0036870:CDS
AAATCTCAATCTCATGGAAT+GGG 0.463289 1_1:-65702453 Msa0036870:CDS
GGATTGCAACGATAATAAAC+AGG 0.467261 1_1:+65703013 None:intergenic
CAAGTATATTGATGACTACT+TGG 0.468006 1_1:-65704267 Msa0036870:CDS
GATAAAAGATGTTGAGACGT+TGG 0.468506 1_1:-65703317 Msa0036870:CDS
GCAGTGTGTCTGGGACATAC+AGG 0.469189 1_1:+65702395 None:intergenic
CAATGCCTCATCATAGAATT+GGG 0.472137 1_1:-65702991 Msa0036870:CDS
AAAATCTCAATCTCATGGAA+TGG 0.472161 1_1:-65702454 Msa0036870:CDS
TAAAGAAAGTAATGAATTTG+TGG 0.474527 1_1:-65703347 Msa0036870:CDS
TTCTCATCTACGAATTTAGC+CGG 0.482987 1_1:-65702820 Msa0036870:CDS
GGACAAGCAAAATCATAAGT+TGG 0.483435 1_1:+65702950 None:intergenic
ATGTCTGCTGCCTGCCATCT+GGG 0.485977 1_1:+65700903 None:intergenic
GAACAAAGCGACGACGAAGA+TGG 0.486973 1_1:-65705837 Msa0036870:exon
ACAAATGCAAAAGGAGAGAA+TGG 0.487392 1_1:-65703182 Msa0036870:CDS
GCGCGGCGGCGGAGAAGGAA+AGG 0.489164 1_1:+65705798 None:intergenic
CCCACATTTCTCTTGTCCAA+CGG 0.491225 1_1:-65705695 Msa0036870:CDS
AATTGCAGATCTAGCTATCT+GGG 0.493842 1_1:-65704210 Msa0036870:CDS
CGGTGAGGAAGTAACCTTGA+TGG 0.493936 1_1:-65702207 Msa0036870:CDS
AATGCCCTGATGGCACTGTT+TGG 0.495372 1_1:+65700673 None:intergenic
CTTTGTTTGCAGCTTGAGGA+AGG 0.496246 1_1:-65701100 Msa0036870:intron
TGCTGAACGATACCAAGGTC+AGG 0.500013 1_1:-65703401 Msa0036870:CDS
TATGCACCTGTACTCTCATC+AGG 0.500252 1_1:-65704311 Msa0036870:CDS
GACCAAGATGGGAATGTCAC+AGG 0.501663 1_1:-65702149 Msa0036870:CDS
CGCAACAGGTCCAAATTTCG+TGG 0.502464 1_1:-65705607 Msa0036870:intron
TCCAATGTGAAGATAGCCAC+TGG 0.503003 1_1:+65703456 None:intergenic
GAGTGTAGACCATATTCAAC+CGG 0.504461 1_1:+65702801 None:intergenic
AATACTGAGCATTACGATCA+TGG 0.505401 1_1:+65702876 None:intergenic
GGGATTGCAAATAACACGAT+TGG 0.508386 1_1:+65700923 None:intergenic
CCTTCATGAGCATCAACAAA+TGG 0.508448 1_1:+65702929 None:intergenic
ATGCGGACAAATGATTTCTC+AGG 0.508905 1_1:+65702329 None:intergenic
TTTCAGGTGCTGGAAAGAGA+TGG 0.510988 1_1:-65703768 Msa0036870:intron
AATCAAACTCCATCAATGTC+AGG 0.511094 1_1:+65702039 None:intergenic
TCAGCCAGTTCCATCAACTC+AGG 0.512208 1_1:+65703253 None:intergenic
AAATGGAAAAGTTGAATCAT+GGG 0.512472 1_1:-65702744 Msa0036870:CDS
CTTTATCCTTGACGACTGGC+TGG 0.513178 1_1:+65703596 None:intergenic
GACGGAATCAGGAGGAAGGG+AGG 0.514373 1_1:+65705718 None:intergenic
AAAATTAATTAGCCAGGGTA+AGG 0.515011 1_1:-65703230 Msa0036870:CDS
GCTTTGTTCACTGTGCTGCT+AGG 0.515150 1_1:+65705851 None:intergenic
CCAATTCTATGATGAGGCAT+TGG 0.515257 1_1:+65702992 None:intergenic
GGCATTTCCCCAATCCATCA+AGG 0.517350 1_1:+65702193 None:intergenic
GGAGAATTTGAAATTATGGA+AGG 0.519163 1_1:-65703122 Msa0036870:CDS
TCCACGTGAACAAATGCAAA+AGG 0.523875 1_1:-65703191 Msa0036870:CDS
GGACCGTAATAATAAGAAGT+TGG 0.525934 1_1:-65705900 Msa0036870:five_prime_UTR
AAGGTATCACTCATGCCCTT+CGG 0.526418 1_1:-65702910 Msa0036870:CDS
TTCAGGTGCTGGAAAGAGAT+GGG 0.528173 1_1:-65703767 Msa0036870:intron
GGTGTGATGTACCCTTCGTC+CGG 0.530625 1_1:-65700955 Msa0036870:CDS
CCATTTGTTGATGCTCATGA+AGG 0.530665 1_1:-65702929 Msa0036870:CDS
TTTACTTTATCCTTGACGAC+TGG 0.533066 1_1:+65703592 None:intergenic
TGGGGACGGAATCAGGAGGA+AGG 0.533685 1_1:+65705714 None:intergenic
CATAGTAAAGGAAGTAGAGA+AGG 0.535865 1_1:-65702171 Msa0036870:CDS
GCATGGAGAAGTATTGCAGC+TGG 0.537955 1_1:-65700996 Msa0036870:CDS
GGGAATGTCACAGGGTTAAG+TGG 0.540528 1_1:-65702140 Msa0036870:CDS
TTACAGGATTCAAGCGGACA+TGG 0.540764 1_1:-65702855 Msa0036870:CDS
TCTGATAACATTAAGGGAGG+AGG 0.541928 1_1:-65703550 Msa0036870:CDS
CAGCCAGTTCCATCAACTCA+GGG 0.544119 1_1:+65703254 None:intergenic
GAAGTAGAGAAGGACCAAGA+TGG 0.544215 1_1:-65702161 Msa0036870:CDS
AAGTAGAGAAGGACCAAGAT+GGG 0.546780 1_1:-65702160 Msa0036870:CDS
AGGAGGAAGGGAGGTGTCGA+TGG 0.549519 1_1:+65705727 None:intergenic
GATGCGGCGATCCCCGCTAA+CGG 0.552578 1_1:+65705773 None:intergenic
TATTTGCAATCCCAGATGGC+AGG 0.556570 1_1:-65700913 Msa0036870:CDS
GACGCAGAGTCTGTATCAGC+CGG 0.557290 1_1:-65702227 Msa0036870:CDS
CGCGGCGGCGGAGAAGGAAA+GGG 0.557658 1_1:+65705799 None:intergenic
GTGTTATTTGCAATCCCAGA+TGG 0.560737 1_1:-65700917 Msa0036870:CDS
CCCCGCTAACGGTGGCGCGG+CGG 0.562116 1_1:+65705784 None:intergenic
ATGCAAAAGGAGAGAATGGA+TGG 0.562327 1_1:-65703178 Msa0036870:CDS
GCAGATCTAGCTATCTGGGC+AGG 0.563032 1_1:-65704206 Msa0036870:CDS
TAAGGGAGGAGGCAAGCCTT+CGG 0.564581 1_1:-65703539 Msa0036870:CDS
GGTTTGCAGTGTTGTGTCCG+TGG 0.564738 1_1:-65703076 Msa0036870:CDS
AATATGCGAAATCTTAAGCA+TGG 0.566056 1_1:-65701013 Msa0036870:CDS
CGCACAATTCCTTGCACTGT+AGG 0.569571 1_1:+65702707 None:intergenic
GAATCCGGCGAGTTTGGATG+CGG 0.575025 1_1:+65705757 None:intergenic
CTAACTAATTCATCTAACTC+AGG 0.576697 1_1:+65702062 None:intergenic
TTTGGCCATAGAAATTAGGA+AGG 0.578574 1_1:+65705545 None:intergenic
TTGGGGAAATGCCATAGTAA+AGG 0.578640 1_1:-65702183 Msa0036870:CDS
GCAGGGCCTGATGAGAGTAC+AGG 0.580273 1_1:+65704305 None:intergenic
CCGTTGGACAAGAGAAATGT+GGG 0.580974 1_1:+65705695 None:intergenic
CCACGATTTCCTACAGTGCA+AGG 0.583620 1_1:-65702716 Msa0036870:CDS
GTGTTGTGTCCGTGGGAAGT+TGG 0.586102 1_1:-65703068 Msa0036870:CDS
GTTTGCAGTGTTGTGTCCGT+GGG 0.587122 1_1:-65703075 Msa0036870:CDS
CATCAAGGTTACTTCCTCAC+CGG 0.589044 1_1:+65702208 None:intergenic
TAAGCATAACACTGAAGTGA+TGG 0.589894 1_1:+65700800 None:intergenic
GGTTTCGAAGGCCGGACGAA+GGG 0.590280 1_1:+65700944 None:intergenic
ATGGTATTCACTTGACCGAA+GGG 0.592206 1_1:+65702895 None:intergenic
CCTTGCACTGTAGGAAATCG+TGG 0.592445 1_1:+65702716 None:intergenic
AACGCAAAATAACCTGACCT+TGG 0.594893 1_1:+65703389 None:intergenic
GCGGCGATCCCCGCTAACGG+TGG 0.596574 1_1:+65705776 None:intergenic
AATGCCAAACAGTGCCATCA+GGG 0.596860 1_1:-65700677 Msa0036870:three_prime_UTR
TTTGCAGCTTGAGGAAGGAG+AGG 0.597573 1_1:-65701095 Msa0036870:intron
CCCGTTGGACAAGAGAAATG+TGG 0.597812 1_1:+65705694 None:intergenic
CCGCCGCGCCACCGTTAGCG+GGG 0.597972 1_1:-65705784 Msa0036870:CDS
TAAAAGATGTTGAGACGTTG+GGG 0.598165 1_1:-65703315 Msa0036870:CDS
TAGTCGAGAACCCAAATACA+AGG 0.598935 1_1:+65700770 None:intergenic
AATAACACGATTGGTTTCGA+AGG 0.600160 1_1:+65700932 None:intergenic
GCAATGACAGCAGTGTGTCT+GGG 0.600339 1_1:+65702386 None:intergenic
CCCAGTGGCTATCTTCACAT+TGG 0.601813 1_1:-65703457 Msa0036870:CDS
GAAAGAGATGGGAAAGCTTG+AGG 0.602516 1_1:-65703756 Msa0036870:CDS
TTGCTTAATCAATGCCCTGA+TGG 0.602743 1_1:+65700663 None:intergenic
CATTTGTCCGCATCATACCT+AGG 0.604356 1_1:-65702319 Msa0036870:CDS
TACAGGATTCAAGCGGACAT+GGG 0.604672 1_1:-65702854 Msa0036870:CDS
TAAAGTAAAGAATGTGAATG+GGG 0.604831 1_1:-65703578 Msa0036870:CDS
AATGATTGCAGGATCAGAGA+GGG 0.606663 1_1:-65703098 Msa0036870:CDS
TTTGTTCTTCTGCGTCACAT+TGG 0.608203 1_1:-65705580 Msa0036870:CDS
AAAAGACCAGCCAGTCGTCA+AGG 0.611058 1_1:-65703602 Msa0036870:CDS
ATGCAGAAACCATAGTGTTG+AGG 0.612137 1_1:-65703143 Msa0036870:CDS
ATCGCCGCATCCAAACTCGC+CGG 0.613745 1_1:-65705761 Msa0036870:CDS
CATGGTATTCACTTGACCGA+AGG 0.616177 1_1:+65702894 None:intergenic
CAGTGTGTCTGGGACATACA+GGG 0.618476 1_1:+65702396 None:intergenic
GTATTGCAGCTGGAGAGAAA+GGG 0.620537 1_1:-65700986 Msa0036870:CDS
GGACAAGAGAAATGTGGGGA+CGG 0.620645 1_1:+65705700 None:intergenic
GATCCCCGCTAACGGTGGCG+CGG 0.624387 1_1:+65705781 None:intergenic
CGGTTTGCACCTGAACCCAG+TGG 0.631994 1_1:-65703472 Msa0036870:CDS
TGGTTTCGAAGGCCGGACGA+AGG 0.632020 1_1:+65700943 None:intergenic
TTGGACCCAATTCTATGATG+AGG 0.632796 1_1:+65702986 None:intergenic
GTATTGTTAACCCTCACTGA+TGG 0.633663 1_1:-65702353 Msa0036870:CDS
GGGGACGGAATCAGGAGGAA+GGG 0.638859 1_1:+65705715 None:intergenic
AATTCAATAGTTGCAGAACA+TGG 0.639406 1_1:-65703697 Msa0036870:CDS
ACCAAGATGGGAATGTCACA+GGG 0.639741 1_1:-65702148 Msa0036870:CDS
GTTTCTGATAACATTAAGGG+AGG 0.642874 1_1:-65703553 Msa0036870:CDS
TTGGCCATAGAAATTAGGAA+GGG 0.643057 1_1:+65705546 None:intergenic
CAGACACACTGCTGTCATTG+CGG 0.643126 1_1:-65702384 Msa0036870:CDS
CCAATGTGAAGATAGCCACT+GGG 0.643680 1_1:+65703457 None:intergenic
AAGTTGGAAAAGTTCGCTTG+CGG 0.645603 1_1:-65703492 Msa0036870:CDS
CATCAACATACGCCTTACCC+TGG 0.646586 1_1:+65703218 None:intergenic
CTTGCATATCCAACTTCCCA+CGG 0.647797 1_1:+65703059 None:intergenic
AACGATAATAAACAGGATCA+CGG 0.648773 1_1:+65703020 None:intergenic
TTTCTCAGGACCATCAGTGA+GGG 0.655675 1_1:+65702343 None:intergenic
GGAAGATCTATCTCTGCCGA+AGG 0.658068 1_1:+65703523 None:intergenic
GAAGTAACCTTGATGGATTG+GGG 0.667338 1_1:-65702200 Msa0036870:CDS
AGAGTCTGTATCAGCCGGTG+AGG 0.670511 1_1:-65702222 Msa0036870:CDS
GTGCAAGGAATTGTGCGTAG+AGG 0.676449 1_1:-65702701 Msa0036870:CDS
ATGATTGCAGGATCAGAGAG+GGG 0.677471 1_1:-65703097 Msa0036870:CDS
ATTTCTCAGGACCATCAGTG+AGG 0.679162 1_1:+65702342 None:intergenic
AATATCAAAATCTTGCACGA+TGG 0.684460 1_1:-65703723 Msa0036870:CDS
AAATGATTGCAGGATCAGAG+AGG 0.689429 1_1:-65703099 Msa0036870:CDS
TCAGTATTACAGGATTCAAG+CGG 0.711357 1_1:-65702861 Msa0036870:CDS
AATGTGGGGACGGAATCAGG+AGG 0.727109 1_1:+65705710 None:intergenic
AAAAGATGTTGAGACGTTGG+GGG 0.753350 1_1:-65703314 Msa0036870:CDS
CGTTGGACAAGAGAAATGTG+GGG 0.758677 1_1:+65705696 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTATAAATTTACTATTT+TGG - chr1_1:65700600-65700619 Msa0036870:three_prime_UTR 10.0%
!!! CATTATAAATTTACTATTTT+GGG - chr1_1:65700601-65700620 Msa0036870:three_prime_UTR 10.0%
!!! ATTATAAATTTACTATTTTG+GGG - chr1_1:65700602-65700621 Msa0036870:three_prime_UTR 10.0%
!! ATAAATTCTTATAACATATA+TGG + chr1_1:65705059-65705078 None:intergenic 10.0%
!!! ATAAAAAAAGTTACTTATTT+TGG + chr1_1:65705886-65705905 None:intergenic 10.0%
!! AAAATTCAATTAAGATTACA+GGG + chr1_1:65701450-65701469 None:intergenic 15.0%
!! AAAAATTCAATTAAGATTAC+AGG + chr1_1:65701451-65701470 None:intergenic 15.0%
!!! TTATTTTTTTTTACACCAAA+CGG - chr1_1:65701591-65701610 Msa0036870:intron 15.0%
!! TTTCAAATAAAAATGAGATA+AGG + chr1_1:65705249-65705268 None:intergenic 15.0%
!! TAACCAACTTCTTATTATTA+CGG + chr1_1:65700629-65700648 None:intergenic 20.0%
!!! GTCAAATTAAAGATTTTTAG+TGG - chr1_1:65701034-65701053 Msa0036870:CDS 20.0%
!!! GATAGAGTTTTTAATTGTTA+AGG - chr1_1:65701095-65701114 Msa0036870:intron 20.0%
!! ATATATATATTAAGCTCACT+AGG + chr1_1:65701156-65701175 None:intergenic 20.0%
!! GTGAGCTTAATATATATATA+AGG - chr1_1:65701157-65701176 Msa0036870:intron 20.0%
!!! GTACTCTTCAATTTTTTTTT+GGG + chr1_1:65701208-65701227 None:intergenic 20.0%
!!! AGTACTCTTCAATTTTTTTT+TGG + chr1_1:65701209-65701228 None:intergenic 20.0%
!! ATGATAAGCATTTATGTATA+AGG - chr1_1:65701233-65701252 Msa0036870:intron 20.0%
!! TGATAAGCATTTATGTATAA+GGG - chr1_1:65701234-65701253 Msa0036870:intron 20.0%
!!! TAGTTAACTTGTTTTTGTAT+AGG - chr1_1:65701648-65701667 Msa0036870:intron 20.0%
!! ATCAATCAATCAATCAATTT+GGG + chr1_1:65701981-65702000 None:intergenic 20.0%
!! AATCAATCAATCAATCAATT+TGG + chr1_1:65701982-65702001 None:intergenic 20.0%
!! AAAAAAAAACAATTGCATGA+CGG + chr1_1:65702142-65702161 None:intergenic 20.0%
!!! TTTAATTTCATTATAGTCTG+TGG - chr1_1:65702608-65702627 Msa0036870:intron 20.0%
!! ATAAAGTAAAGAATGTGAAT+GGG - chr1_1:65702944-65702963 Msa0036870:CDS 20.0%
!! TAAAGAAAGTAATGAATTTG+TGG - chr1_1:65703176-65703195 Msa0036870:CDS 20.0%
!! ATACTTGTTCAACAATAAAT+TGG + chr1_1:65703869-65703888 None:intergenic 20.0%
!! ATAAGAAATACAGTAGAATA+TGG - chr1_1:65703945-65703964 Msa0036870:intron 20.0%
!!! TTTGTTTCTGTCATTAATAA+AGG - chr1_1:65704545-65704564 Msa0036870:intron 20.0%
!! AATTGCACTTCATTAATATT+GGG - chr1_1:65704644-65704663 Msa0036870:intron 20.0%
!! AGCAAATATAAACTTAAACA+GGG + chr1_1:65705405-65705424 None:intergenic 20.0%
!! AAGCAAATATAAACTTAAAC+AGG + chr1_1:65705406-65705425 None:intergenic 20.0%
!!! TGAATATATTCTGTTTTTTG+TGG - chr1_1:65705780-65705799 Msa0036870:CDS 20.0%
! ATTAATAGATCATAGAAACG+AGG + chr1_1:65700879-65700898 None:intergenic 25.0%
!! TTTGACTGAAAAAACTTGTT+TGG - chr1_1:65701309-65701328 Msa0036870:intron 25.0%
! TTGAATGAATATGTAGTGTT+TGG + chr1_1:65701545-65701564 None:intergenic 25.0%
!!! GTTTGCTATAGAAATAGTTT+AGG + chr1_1:65701619-65701638 None:intergenic 25.0%
!! TATGATATTTCTGTAGTTCA+AGG + chr1_1:65701887-65701906 None:intergenic 25.0%
! TTGATTGATTGATTGACAAT+AGG - chr1_1:65701988-65702007 Msa0036870:intron 25.0%
! TTTACTTATTTCCTCTTTCT+TGG - chr1_1:65702162-65702181 Msa0036870:CDS 25.0%
! ACAACAATAATCTATTGTTG+TGG - chr1_1:65702573-65702592 Msa0036870:intron 25.0%
!! TCTTCTATTTCTCTATTCTT+TGG - chr1_1:65702654-65702673 Msa0036870:intron 25.0%
! GATAAAGTAAAGAATGTGAA+TGG - chr1_1:65702943-65702962 Msa0036870:CDS 25.0%
! TAAAGTAAAGAATGTGAATG+GGG - chr1_1:65702945-65702964 Msa0036870:CDS 25.0%
!! GATGTTTCTGATAACATTAA+GGG - chr1_1:65702967-65702986 Msa0036870:CDS 25.0%
! AATTCATTACTTTCTTTAGC+AGG + chr1_1:65703174-65703193 None:intergenic 25.0%
!! TTGAGGAGAATTTGAAATTA+TGG - chr1_1:65703397-65703416 Msa0036870:CDS 25.0%
!! ATGATTCAACTTTTCCATTT+TGG + chr1_1:65703779-65703798 None:intergenic 25.0%
! AAAATGGAAAAGTTGAATCA+TGG - chr1_1:65703778-65703797 Msa0036870:intron 25.0%
! AAATGGAAAAGTTGAATCAT+GGG - chr1_1:65703779-65703798 Msa0036870:intron 25.0%
! ATCAAAAAATCTCAATCTCA+TGG - chr1_1:65704064-65704083 Msa0036870:intron 25.0%
! GTCAATAATCTTCTTATTGA+TGG + chr1_1:65704108-65704127 None:intergenic 25.0%
! GAATTGCACTTCATTAATAT+TGG - chr1_1:65704643-65704662 Msa0036870:intron 25.0%
!!! AAGATCAAATAAGAAGTGTT+AGG + chr1_1:65704705-65704724 None:intergenic 25.0%
! GTGTAAACACAAAATTATAC+AGG + chr1_1:65704764-65704783 None:intergenic 25.0%
! GGATATTTGTTTATACTGTA+AGG - chr1_1:65705010-65705029 Msa0036870:intron 25.0%
!!! TTTGTTTTTGAATGACAAGT+TGG - chr1_1:65705662-65705681 Msa0036870:intron 25.0%
! TTATAAGCAACCTTGTATTT+GGG - chr1_1:65705743-65705762 Msa0036870:CDS 25.0%
!!! GTGAACTTGTTATTTTAGTT+TGG - chr1_1:65705821-65705840 Msa0036870:CDS 25.0%
AATTTGCAATTATTCGCAAC+AGG - chr1_1:65700902-65700921 Msa0036870:CDS 30.0%
!! TCATTTTGGCCATAGAAATT+AGG + chr1_1:65700985-65701004 None:intergenic 30.0%
TTTGACAAAAACATCTAACC+TGG + chr1_1:65701020-65701039 None:intergenic 30.0%
TGAATAAGTGATGTTGTCTA+AGG - chr1_1:65701073-65701092 Msa0036870:CDS 30.0%
TCTATAATAAGCTGCAAACA+TGG + chr1_1:65701121-65701140 None:intergenic 30.0%
!!! CTCTTCAATTTTTTTTTGGG+TGG + chr1_1:65701205-65701224 None:intergenic 30.0%
TTTATGTATAAGGGTCTGTT+CGG - chr1_1:65701243-65701262 Msa0036870:intron 30.0%
GTAGTGTTTGGTAAAATTAG+CGG + chr1_1:65701533-65701552 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr1_1:65701677-65701696 Msa0036870:intron 30.0%
! GCTTATTTGAGTTTATCTAC+TGG + chr1_1:65701793-65701812 None:intergenic 30.0%
TATTTACTGCTTGTTTGGAT+TGG + chr1_1:65701815-65701834 None:intergenic 30.0%
AGCAATATTTACTGCTTGTT+TGG + chr1_1:65701820-65701839 None:intergenic 30.0%
TCCTTGGTTTCTTTCAAAAT+AGG - chr1_1:65701937-65701956 Msa0036870:intron 30.0%
!! TCCTATTTTGAAAGAAACCA+AGG + chr1_1:65701941-65701960 None:intergenic 30.0%
AATAGGAGAGTGATAGTTTA+AGG - chr1_1:65701954-65701973 Msa0036870:intron 30.0%
TGATTGATTGACAATAGGTT+AGG - chr1_1:65701993-65702012 Msa0036870:intron 30.0%
GATTGATTGACAATAGGTTA+GGG - chr1_1:65701994-65702013 Msa0036870:intron 30.0%
TAGTTCAGTGACAAAATTTG+AGG - chr1_1:65702036-65702055 Msa0036870:CDS 30.0%
AGTTCAGTGACAAAATTTGA+GGG - chr1_1:65702037-65702056 Msa0036870:CDS 30.0%
TTGTTTAGGGATCAAATTGA+AGG - chr1_1:65702067-65702086 Msa0036870:CDS 30.0%
ACAACTAACAAAAGAAACAC+CGG + chr1_1:65702097-65702116 None:intergenic 30.0%
!!! TGTTAGTTGTTGTTTGCTTT+TGG - chr1_1:65702107-65702126 Msa0036870:CDS 30.0%
! CAAGTATATTGATGACTACT+TGG - chr1_1:65702256-65702275 Msa0036870:CDS 30.0%
AGGTAAAGTTGAATAGGTAT+AGG + chr1_1:65702371-65702390 None:intergenic 30.0%
TATCACAGGTAAAGTTGAAT+AGG + chr1_1:65702377-65702396 None:intergenic 30.0%
! TCTTTTAAACATCCTTCCTA+TGG - chr1_1:65702410-65702429 Msa0036870:CDS 30.0%
! TGTTTAGTGATTGCATTTTG+TGG - chr1_1:65702452-65702471 Msa0036870:CDS 30.0%
TGCAAGCTATATTCCATATA+AGG + chr1_1:65702519-65702538 None:intergenic 30.0%
CCATCAAGTTTCATAGATTA+AGG + chr1_1:65702706-65702725 None:intergenic 30.0%
CCTTAATCTATGAAACTTGA+TGG - chr1_1:65702703-65702722 Msa0036870:CDS 30.0%
AATATCAAAATCTTGCACGA+TGG - chr1_1:65702800-65702819 Msa0036870:CDS 30.0%
AATTCAATAGTTGCAGAACA+TGG - chr1_1:65702826-65702845 Msa0036870:CDS 30.0%
GCAACATATATTGGCAAAAA+AGG - chr1_1:65702871-65702890 Msa0036870:CDS 30.0%
ATATATTGGCAAAAAAGGAG+TGG - chr1_1:65702876-65702895 Msa0036870:CDS 30.0%
TATATTGGCAAAAAAGGAGT+GGG - chr1_1:65702877-65702896 Msa0036870:CDS 30.0%
! GGATGTTTCTGATAACATTA+AGG - chr1_1:65702966-65702985 Msa0036870:CDS 30.0%
ATAAAAGATGTTGAGACGTT+GGG - chr1_1:65703207-65703226 Msa0036870:CDS 30.0%
GCTGAAAAATTAATTAGCCA+GGG - chr1_1:65703288-65703307 Msa0036870:CDS 30.0%
AAAATTAATTAGCCAGGGTA+AGG - chr1_1:65703293-65703312 Msa0036870:CDS 30.0%
! GGAGAATTTGAAATTATGGA+AGG - chr1_1:65703401-65703420 Msa0036870:CDS 30.0%
AACGATAATAAACAGGATCA+CGG + chr1_1:65703506-65703525 None:intergenic 30.0%
AGTTGGATACACTTTATACT+TGG + chr1_1:65703559-65703578 None:intergenic 30.0%
TTGTTGAACAAGTATGTACA+AGG - chr1_1:65703874-65703893 Msa0036870:intron 30.0%
AGCATGGATATACAACAAAA+AGG + chr1_1:65704004-65704023 None:intergenic 30.0%
! AGTGATCAACATTTTAAGCA+TGG + chr1_1:65704020-65704039 None:intergenic 30.0%
AAAATCTCAATCTCATGGAA+TGG - chr1_1:65704069-65704088 Msa0036870:intron 30.0%
AAATCTCAATCTCATGGAAT+GGG - chr1_1:65704070-65704089 Msa0036870:intron 30.0%
AAGCTACCACATATACAAAA+AGG - chr1_1:65704255-65704274 Msa0036870:CDS 30.0%
! CCATATCCTTTTTGTATATG+TGG + chr1_1:65704264-65704283 None:intergenic 30.0%
CCACATATACAAAAAGGATA+TGG - chr1_1:65704261-65704280 Msa0036870:CDS 30.0%
CTAACTAATTCATCTAACTC+AGG + chr1_1:65704464-65704483 None:intergenic 30.0%
TTACCTCATTACGAAGAAAA+AGG - chr1_1:65704505-65704524 Msa0036870:intron 30.0%
! ATACCTTTTTCTTCGTAATG+AGG + chr1_1:65704511-65704530 None:intergenic 30.0%
CATTGCATTATCTATCCATT+TGG - chr1_1:65704738-65704757 Msa0036870:intron 30.0%
ACAAAATTATACAGGCCAAA+TGG + chr1_1:65704756-65704775 None:intergenic 30.0%
!! GATTAGTTTCTTATCCTTTG+CGG + chr1_1:65704829-65704848 None:intergenic 30.0%
AAATTAAAGCCAAGGCTTAT+TGG + chr1_1:65704960-65704979 None:intergenic 30.0%
TATAAAACTAGTTCCATGGA+AGG + chr1_1:65705110-65705129 None:intergenic 30.0%
GGACAATAATAAGGACAATA+TGG + chr1_1:65705136-65705155 None:intergenic 30.0%
TATGTACTTTCAAGAGAATG+GGG + chr1_1:65705166-65705185 None:intergenic 30.0%
GTATGTACTTTCAAGAGAAT+GGG + chr1_1:65705167-65705186 None:intergenic 30.0%
TTTGCTTCAGTGTTAAGTAT+TGG - chr1_1:65705202-65705221 Msa0036870:intron 30.0%
TGGGATTAGGTATATACATA+AGG + chr1_1:65705290-65705309 None:intergenic 30.0%
! AACCAAAGTGTCTATTCATA+GGG + chr1_1:65705331-65705350 None:intergenic 30.0%
ATGCTTAAGATTTCGCATAT+TGG + chr1_1:65705511-65705530 None:intergenic 30.0%
AATATGCGAAATCTTAAGCA+TGG - chr1_1:65705510-65705529 Msa0036870:intron 30.0%
!! TGAATGACAAGTTGGTAATT+TGG - chr1_1:65705670-65705689 Msa0036870:intron 30.0%
CTTATAAGCAACCTTGTATT+TGG - chr1_1:65705742-65705761 Msa0036870:CDS 30.0%
GGACCGTAATAATAAGAAGT+TGG - chr1_1:65700623-65700642 Msa0036870:three_prime_UTR 35.0%
! TCAAGACTAGAGTGAGTTTT+CGG + chr1_1:65700652-65700671 None:intergenic 35.0%
ACGAGGAAAAGATATGAGAA+AGG + chr1_1:65700862-65700881 None:intergenic 35.0%
AACAAATGCTCCACGAAATT+TGG + chr1_1:65700929-65700948 None:intergenic 35.0%
TTGGCCATAGAAATTAGGAA+GGG + chr1_1:65700980-65700999 None:intergenic 35.0%
TTTGGCCATAGAAATTAGGA+AGG + chr1_1:65700981-65701000 None:intergenic 35.0%
! GGCAAGCTTCTAAATCATTT+TGG + chr1_1:65700999-65701018 None:intergenic 35.0%
AAATGATTTAGAAGCTTGCC+AGG - chr1_1:65700999-65701018 Msa0036870:CDS 35.0%
!!! ATTTTTTTTTGGGTGGTGTC+CGG + chr1_1:65701198-65701217 None:intergenic 35.0%
ATAAGCTTGTGAGAAAGTGA+TGG + chr1_1:65701338-65701357 None:intergenic 35.0%
!! GCTATAAGCTTTAAGCTAGT+TGG + chr1_1:65701403-65701422 None:intergenic 35.0%
CTTAAGTGAACCTTCAATCT+GGG - chr1_1:65701838-65701857 Msa0036870:intron 35.0%
ATCGAGAATAGTTTCAAGAC+TGG + chr1_1:65701911-65701930 None:intergenic 35.0%
TATTCTCGATAGTTAGTCCT+TGG - chr1_1:65701921-65701940 Msa0036870:intron 35.0%
ATCTGAAAAGTCCAAGAAAG+AGG + chr1_1:65702176-65702195 None:intergenic 35.0%
! TGCATCCATTTTCAAAAGCA+GGG + chr1_1:65702238-65702257 None:intergenic 35.0%
! TTGCATCCATTTTCAAAAGC+AGG + chr1_1:65702239-65702258 None:intergenic 35.0%
!!! GAGAAGCGTACATTTTTAGT+TGG - chr1_1:65702278-65702297 Msa0036870:CDS 35.0%
AATTGCAGATCTAGCTATCT+GGG - chr1_1:65702313-65702332 Msa0036870:CDS 35.0%
AGGATGTTTAAAAGAGACTC+AGG + chr1_1:65702405-65702424 None:intergenic 35.0%
AAACATCCTTCCTATGGAAA+AGG - chr1_1:65702416-65702435 Msa0036870:CDS 35.0%
! ACAAGGATTTCCTTTTCCAT+AGG + chr1_1:65702429-65702448 None:intergenic 35.0%
GGGTTTATTGTTGCCTTATA+TGG - chr1_1:65702503-65702522 Msa0036870:intron 35.0%
CTTGCAACATATACTAGATC+CGG - chr1_1:65702533-65702552 Msa0036870:intron 35.0%
! CTGAAAAGGCATAATGTAGA+TGG + chr1_1:65702741-65702760 None:intergenic 35.0%
! CATCTACATTATGCCTTTTC+AGG - chr1_1:65702739-65702758 Msa0036870:CDS 35.0%
GAAGTCACAGCAACATATAT+TGG - chr1_1:65702862-65702881 Msa0036870:CDS 35.0%
TTTACTTTATCCTTGACGAC+TGG + chr1_1:65702934-65702953 None:intergenic 35.0%
GTTTCTGATAACATTAAGGG+AGG - chr1_1:65702970-65702989 Msa0036870:CDS 35.0%
! TATTTTGCTGAACGATACCA+AGG - chr1_1:65703117-65703136 Msa0036870:CDS 35.0%
GATAAAAGATGTTGAGACGT+TGG - chr1_1:65703206-65703225 Msa0036870:CDS 35.0%
TAAAAGATGTTGAGACGTTG+GGG - chr1_1:65703208-65703227 Msa0036870:CDS 35.0%
GGCTGAAAAATTAATTAGCC+AGG - chr1_1:65703287-65703306 Msa0036870:CDS 35.0%
ACAAATGCAAAAGGAGAGAA+TGG - chr1_1:65703341-65703360 Msa0036870:CDS 35.0%
TCAAATTCTCCTCAACACTA+TGG + chr1_1:65703392-65703411 None:intergenic 35.0%
TTATGGAAGGAAATGATTGC+AGG - chr1_1:65703414-65703433 Msa0036870:CDS 35.0%
GGATTGCAACGATAATAAAC+AGG + chr1_1:65703513-65703532 None:intergenic 35.0%
CAATGCCTCATCATAGAATT+GGG - chr1_1:65703532-65703551 Msa0036870:CDS 35.0%
GGACAAGCAAAATCATAAGT+TGG + chr1_1:65703576-65703595 None:intergenic 35.0%
AATACTGAGCATTACGATCA+TGG + chr1_1:65703650-65703669 None:intergenic 35.0%
ATCGTAATGCTCAGTATTAC+AGG - chr1_1:65703652-65703671 Msa0036870:CDS 35.0%
TCAGTATTACAGGATTCAAG+CGG - chr1_1:65703662-65703681 Msa0036870:CDS 35.0%
TTCTCATCTACGAATTTAGC+CGG - chr1_1:65703703-65703722 Msa0036870:CDS 35.0%
! CTTCTATGGTTTGTCCAAAA+TGG - chr1_1:65703762-65703781 Msa0036870:CDS 35.0%
! ACAAAAAGTATGAAGCTGCT+GGG - chr1_1:65704228-65704247 Msa0036870:CDS 35.0%
CTTCTCTACTTCCTTTACTA+TGG + chr1_1:65704354-65704373 None:intergenic 35.0%
CATAGTAAAGGAAGTAGAGA+AGG - chr1_1:65704352-65704371 Msa0036870:intron 35.0%
! AGTGGTGTTTTACATCTTGA+AGG - chr1_1:65704401-65704420 Msa0036870:intron 35.0%
! ATTAGTTAGCCTGACATTGA+TGG - chr1_1:65704475-65704494 Msa0036870:intron 35.0%
AATCAAACTCCATCAATGTC+AGG + chr1_1:65704487-65704506 None:intergenic 35.0%
!! CTTTTGATTGGCTGTATCTA+TGG - chr1_1:65704601-65704620 Msa0036870:intron 35.0%
CTAATCTATACACTACCATC+AGG - chr1_1:65704843-65704862 Msa0036870:intron 35.0%
! TGGTAGTCTTGATTAAGTGT+CGG + chr1_1:65704894-65704913 None:intergenic 35.0%
TCTCTCTCAAATTAAAGCCA+AGG + chr1_1:65704968-65704987 None:intergenic 35.0%
GAGAGAGAAAAATGACACTT+TGG - chr1_1:65704980-65704999 Msa0036870:intron 35.0%
AAATGACACTTTGGTCTAAG+TGG - chr1_1:65704989-65705008 Msa0036870:intron 35.0%
GTGCTATAAAACTAGTTCCA+TGG + chr1_1:65705114-65705133 None:intergenic 35.0%
GGTATGTACTTTCAAGAGAA+TGG + chr1_1:65705168-65705187 None:intergenic 35.0%
AAGCAAACAGGTATATGCTA+GGG + chr1_1:65705189-65705208 None:intergenic 35.0%
TACTTAACACTGAAGCAAAC+AGG + chr1_1:65705201-65705220 None:intergenic 35.0%
!! ACTTTTAAGAGAGTGGGATT+AGG + chr1_1:65705303-65705322 None:intergenic 35.0%
!! GTATGCACTTTTAAGAGAGT+GGG + chr1_1:65705309-65705328 None:intergenic 35.0%
TACCCTATGAATAGACACTT+TGG - chr1_1:65705326-65705345 Msa0036870:intron 35.0%
! GAACCAAAGTGTCTATTCAT+AGG + chr1_1:65705332-65705351 None:intergenic 35.0%
AAAAAGGAGACTCTAGCATA+TGG - chr1_1:65705480-65705499 Msa0036870:intron 35.0%
!! AATAACACGATTGGTTTCGA+AGG + chr1_1:65705594-65705613 None:intergenic 35.0%
GGTAATTTGGATAGCTATTG+TGG - chr1_1:65705683-65705702 Msa0036870:intron 35.0%
TAAGCATAACACTGAAGTGA+TGG + chr1_1:65705726-65705745 None:intergenic 35.0%
TTTGTTCTTCTGCGTCACAT+TGG - chr1_1:65700943-65700962 Msa0036870:CDS 40.0%
GCAACCCTTCCTAATTTCTA+TGG - chr1_1:65700973-65700992 Msa0036870:CDS 40.0%
!!! TTTTTTTTTGGGTGGTGTCC+GGG + chr1_1:65701197-65701216 None:intergenic 40.0%
GAAATAGTTTAGGCTCCGTT+TGG + chr1_1:65701609-65701628 None:intergenic 40.0%
! AGACGGTTTGGAAAAACTTG+TGG + chr1_1:65701757-65701776 None:intergenic 40.0%
! ATAAGTTTTGCGAGACGGTT+TGG + chr1_1:65701769-65701788 None:intergenic 40.0%
GCTTAAGTGAACCTTCAATC+TGG - chr1_1:65701837-65701856 Msa0036870:intron 40.0%
TTGAGGGTGAGTGATTGTTT+AGG - chr1_1:65702053-65702072 Msa0036870:CDS 40.0%
TGAGGGTGAGTGATTGTTTA+GGG - chr1_1:65702054-65702073 Msa0036870:CDS 40.0%
GGATCAAATTGAAGGTTTGC+CGG - chr1_1:65702075-65702094 Msa0036870:CDS 40.0%
CAATTGCAGATCTAGCTATC+TGG - chr1_1:65702312-65702331 Msa0036870:CDS 40.0%
! GGATTTCCTTTTCCATAGGA+AGG + chr1_1:65702425-65702444 None:intergenic 40.0%
GCAATCACTAAACAAGCACA+AGG + chr1_1:65702446-65702465 None:intergenic 40.0%
AACAATAAACCCTGTCAGCA+GGG + chr1_1:65702495-65702514 None:intergenic 40.0%
! ATCCGGTTTGCTCTATTGTT+TGG - chr1_1:65702550-65702569 Msa0036870:intron 40.0%
GTCCAAACAATAGAGCAAAC+CGG + chr1_1:65702555-65702574 None:intergenic 40.0%
TCTGATAACATTAAGGGAGG+AGG - chr1_1:65702973-65702992 Msa0036870:CDS 40.0%
AAGTTGGAAAAGTTCGCTTG+CGG - chr1_1:65703031-65703050 Msa0036870:CDS 40.0%
AACGCAAAATAACCTGACCT+TGG + chr1_1:65703137-65703156 None:intergenic 40.0%
AAAAGATGTTGAGACGTTGG+GGG - chr1_1:65703209-65703228 Msa0036870:CDS 40.0%
! AGATTACTTCCCTGAGTTGA+TGG - chr1_1:65703260-65703279 Msa0036870:CDS 40.0%
TCCACGTGAACAAATGCAAA+AGG - chr1_1:65703332-65703351 Msa0036870:CDS 40.0%
! TCCTTTTGCATTTGTTCACG+TGG + chr1_1:65703336-65703355 None:intergenic 40.0%
ATGCAAAAGGAGAGAATGGA+TGG - chr1_1:65703345-65703364 Msa0036870:CDS 40.0%
ATGCAGAAACCATAGTGTTG+AGG - chr1_1:65703380-65703399 Msa0036870:CDS 40.0%
AAATGATTGCAGGATCAGAG+AGG - chr1_1:65703424-65703443 Msa0036870:CDS 40.0%
AATGATTGCAGGATCAGAGA+GGG - chr1_1:65703425-65703444 Msa0036870:CDS 40.0%
CCAATTCTATGATGAGGCAT+TGG + chr1_1:65703534-65703553 None:intergenic 40.0%
CCAATGCCTCATCATAGAAT+TGG - chr1_1:65703531-65703550 Msa0036870:CDS 40.0%
TTGGACCCAATTCTATGATG+AGG + chr1_1:65703540-65703559 None:intergenic 40.0%
CCTTCATGAGCATCAACAAA+TGG + chr1_1:65703597-65703616 None:intergenic 40.0%
! CCATTTGTTGATGCTCATGA+AGG - chr1_1:65703594-65703613 Msa0036870:CDS 40.0%
ATGGTATTCACTTGACCGAA+GGG + chr1_1:65703631-65703650 None:intergenic 40.0%
CGAATTTAGCCGGTTGAATA+TGG - chr1_1:65703713-65703732 Msa0036870:CDS 40.0%
GAGTGTAGACCATATTCAAC+CGG + chr1_1:65703725-65703744 None:intergenic 40.0%
TCAGCAAACGAAAGCTTCTA+TGG - chr1_1:65703748-65703767 Msa0036870:CDS 40.0%
ACTGTTCTCTGTACTTGTAC+AGG - chr1_1:65704037-65704056 Msa0036870:intron 40.0%
CTGTTCTCTGTACTTGTACA+GGG - chr1_1:65704038-65704057 Msa0036870:intron 40.0%
TGTTCTCTGTACTTGTACAG+GGG - chr1_1:65704039-65704058 Msa0036870:intron 40.0%
GTATTGTTAACCCTCACTGA+TGG - chr1_1:65704170-65704189 Msa0036870:intron 40.0%
ATGCGGACAAATGATTTCTC+AGG + chr1_1:65704197-65704216 None:intergenic 40.0%
! TTTTGTGCCTAGGTATGATG+CGG + chr1_1:65704214-65704233 None:intergenic 40.0%
!! GCTTCATACTTTTTGTGCCT+AGG + chr1_1:65704224-65704243 None:intergenic 40.0%
! CACAAAAAGTATGAAGCTGC+TGG - chr1_1:65704227-65704246 Msa0036870:CDS 40.0%
! AGGAAGTAACCTTGATGGAT+TGG - chr1_1:65704321-65704340 Msa0036870:CDS 40.0%
!! GGAAGTAACCTTGATGGATT+GGG - chr1_1:65704322-65704341 Msa0036870:CDS 40.0%
!! GAAGTAACCTTGATGGATTG+GGG - chr1_1:65704323-65704342 Msa0036870:CDS 40.0%
TTGGGGAAATGCCATAGTAA+AGG - chr1_1:65704340-65704359 Msa0036870:intron 40.0%
AAGTAGAGAAGGACCAAGAT+GGG - chr1_1:65704363-65704382 Msa0036870:intron 40.0%
TATGTTTAGCATAGCCGCAA+AGG - chr1_1:65704812-65704831 Msa0036870:intron 40.0%
!! TAGTCTTGATTAAGTGTCGG+TGG + chr1_1:65704891-65704910 None:intergenic 40.0%
ACATGATTGATAGAGAGGTG+GGG + chr1_1:65704931-65704950 None:intergenic 40.0%
GACATGATTGATAGAGAGGT+GGG + chr1_1:65704932-65704951 None:intergenic 40.0%
TGACATGATTGATAGAGAGG+TGG + chr1_1:65704933-65704952 None:intergenic 40.0%
TAAAGCCAAGGCTTATTGGT+GGG + chr1_1:65704956-65704975 None:intergenic 40.0%
TTAAAGCCAAGGCTTATTGG+TGG + chr1_1:65704957-65704976 None:intergenic 40.0%
TTCCATGGAAGGTTCATGAA+AGG + chr1_1:65705099-65705118 None:intergenic 40.0%
GGTCAGGATGGACAATAATA+AGG + chr1_1:65705145-65705164 None:intergenic 40.0%
GAAGCAAACAGGTATATGCT+AGG + chr1_1:65705190-65705209 None:intergenic 40.0%
!! GGTATGCACTTTTAAGAGAG+TGG + chr1_1:65705310-65705329 None:intergenic 40.0%
!! TTTGCTTTGTTTGCAGCTTG+AGG - chr1_1:65705419-65705438 Msa0036870:intron 40.0%
GCTTAACCCTTGCACAAAAA+AGG - chr1_1:65705464-65705483 Msa0036870:intron 40.0%
!!! GAGTCTCCTTTTTTGTGCAA+GGG + chr1_1:65705473-65705492 None:intergenic 40.0%
!!! AGAGTCTCCTTTTTTGTGCA+AGG + chr1_1:65705474-65705493 None:intergenic 40.0%
TGGAGAGAAAGGGATATTTC+AGG - chr1_1:65705547-65705566 Msa0036870:CDS 40.0%
GGGATTGCAAATAACACGAT+TGG + chr1_1:65705603-65705622 None:intergenic 40.0%
!! GTGTTATTTGCAATCCCAGA+TGG - chr1_1:65705606-65705625 Msa0036870:intron 40.0%
TAGTCGAGAACCCAAATACA+AGG + chr1_1:65705756-65705775 None:intergenic 40.0%
TTGCTTAATCAATGCCCTGA+TGG + chr1_1:65705863-65705882 None:intergenic 40.0%
CGTTGGACAAGAGAAATGTG+GGG + chr1_1:65700830-65700849 None:intergenic 45.0%
CCGTTGGACAAGAGAAATGT+GGG + chr1_1:65700831-65700850 None:intergenic 45.0%
CCCACATTTCTCTTGTCCAA+CGG - chr1_1:65700828-65700847 Msa0036870:three_prime_UTR 45.0%
CCACATTTCTCTTGTCCAAC+GGG - chr1_1:65700829-65700848 Msa0036870:three_prime_UTR 45.0%
!!! TTTTTTTTGGGTGGTGTCCG+GGG + chr1_1:65701196-65701215 None:intergenic 45.0%
! CTGGCATAAGTTTTGCGAGA+CGG + chr1_1:65701774-65701793 None:intergenic 45.0%
GTCCCACTTTCTCTCCTATT+GGG - chr1_1:65701860-65701879 Msa0036870:intron 45.0%
GACCCAATAGGAGAGAAAGT+GGG + chr1_1:65701865-65701884 None:intergenic 45.0%
CTGTAGTTCAAGGACCCAAT+AGG + chr1_1:65701877-65701896 None:intergenic 45.0%
TATGCACCTGTACTCTCATC+AGG - chr1_1:65702212-65702231 Msa0036870:CDS 45.0%
!! TCAGGCCCTGCTTTTGAAAA+TGG - chr1_1:65702230-65702249 Msa0036870:CDS 45.0%
AGACTCAGGAGTAGTATCAC+AGG + chr1_1:65702391-65702410 None:intergenic 45.0%
TAGTTGTATCCCTGCTGACA+GGG - chr1_1:65702483-65702502 Msa0036870:intron 45.0%
CAACAATAAACCCTGTCAGC+AGG + chr1_1:65702496-65702515 None:intergenic 45.0%
!!! CATTATGCCTTTTCAGGTGC+TGG - chr1_1:65702745-65702764 Msa0036870:CDS 45.0%
TCTCTTTCCAGCACCTGAAA+AGG + chr1_1:65702755-65702774 None:intergenic 45.0%
!! TTTCAGGTGCTGGAAAGAGA+TGG - chr1_1:65702755-65702774 Msa0036870:CDS 45.0%
!! TTCAGGTGCTGGAAAGAGAT+GGG - chr1_1:65702756-65702775 Msa0036870:CDS 45.0%
GAAAGAGATGGGAAAGCTTG+AGG - chr1_1:65702767-65702786 Msa0036870:CDS 45.0%
!!! TCTTTTGGCTTGGTTGCAGA+TGG + chr1_1:65702907-65702926 None:intergenic 45.0%
! ACTTTTCCAACTTCAGCAGC+TGG + chr1_1:65703024-65703043 None:intergenic 45.0%
CCAATGTGAAGATAGCCACT+GGG + chr1_1:65703069-65703088 None:intergenic 45.0%
TCCAATGTGAAGATAGCCAC+TGG + chr1_1:65703070-65703089 None:intergenic 45.0%
ATGATTGCAGGATCAGAGAG+GGG - chr1_1:65703426-65703445 Msa0036870:CDS 45.0%
CTTGCATATCCAACTTCCCA+CGG + chr1_1:65703467-65703486 None:intergenic 45.0%
!! GGATCACGGAGTGATTTGTT+TGG + chr1_1:65703492-65703511 None:intergenic 45.0%
! AAGGTATCACTCATGCCCTT+CGG - chr1_1:65703613-65703632 Msa0036870:CDS 45.0%
CATGGTATTCACTTGACCGA+AGG + chr1_1:65703632-65703651 None:intergenic 45.0%
TTACAGGATTCAAGCGGACA+TGG - chr1_1:65703668-65703687 Msa0036870:CDS 45.0%
TACAGGATTCAAGCGGACAT+GGG - chr1_1:65703669-65703688 Msa0036870:CDS 45.0%
GTTCTCTGTACTTGTACAGG+GGG - chr1_1:65704040-65704059 Msa0036870:intron 45.0%
TTTCTCAGGACCATCAGTGA+GGG + chr1_1:65704183-65704202 None:intergenic 45.0%
ATTTCTCAGGACCATCAGTG+AGG + chr1_1:65704184-65704203 None:intergenic 45.0%
CATTTGTCCGCATCATACCT+AGG - chr1_1:65704204-65704223 Msa0036870:CDS 45.0%
CATCAAGGTTACTTCCTCAC+CGG + chr1_1:65704318-65704337 None:intergenic 45.0%
GAAGTAGAGAAGGACCAAGA+TGG - chr1_1:65704362-65704381 Msa0036870:intron 45.0%
ACCAAGATGGGAATGTCACA+GGG - chr1_1:65704375-65704394 Msa0036870:intron 45.0%
! CCAAGTGAGCTTCAGTTTTG+TGG + chr1_1:65704438-65704457 None:intergenic 45.0%
CCACAAAACTGAAGCTCACT+TGG - chr1_1:65704435-65704454 Msa0036870:intron 45.0%
AAGACTACCATCAACTCCCT+TGG - chr1_1:65704904-65704923 Msa0036870:intron 45.0%
CATGATTGATAGAGAGGTGG+GGG + chr1_1:65704930-65704949 None:intergenic 45.0%
GGGTGACATGATTGATAGAG+AGG + chr1_1:65704936-65704955 None:intergenic 45.0%
GACCTTTCATGAACCTTCCA+TGG - chr1_1:65705094-65705113 Msa0036870:intron 45.0%
ACTTTCAAGAGAATGGGGTC+AGG + chr1_1:65705161-65705180 None:intergenic 45.0%
ACTTAAACAGGGAAGCAAGC+AGG + chr1_1:65705394-65705413 None:intergenic 45.0%
! CTTTGTTTGCAGCTTGAGGA+AGG - chr1_1:65705423-65705442 Msa0036870:intron 45.0%
AGTATTGCAGCTGGAGAGAA+AGG - chr1_1:65705536-65705555 Msa0036870:CDS 45.0%
GTATTGCAGCTGGAGAGAAA+GGG - chr1_1:65705537-65705556 Msa0036870:CDS 45.0%
TATTTGCAATCCCAGATGGC+AGG - chr1_1:65705610-65705629 Msa0036870:intron 45.0%
AATGCCAAACAGTGCCATCA+GGG - chr1_1:65705846-65705865 Msa0036870:five_prime_UTR 45.0%
! GCTTTGTTCACTGTGCTGCT+AGG + chr1_1:65700675-65700694 None:intergenic 50.0%
GAACAAAGCGACGACGAAGA+TGG - chr1_1:65700686-65700705 Msa0036870:three_prime_UTR 50.0%
GTCGATGGATGGAGAGAATC+CGG + chr1_1:65700784-65700803 None:intergenic 50.0%
AGAAATGTGGGGACGGAATC+AGG + chr1_1:65700819-65700838 None:intergenic 50.0%
GGACAAGAGAAATGTGGGGA+CGG + chr1_1:65700826-65700845 None:intergenic 50.0%
CCCGTTGGACAAGAGAAATG+TGG + chr1_1:65700832-65700851 None:intergenic 50.0%
GAGAAAGGAAACGTACCCGT+TGG + chr1_1:65700847-65700866 None:intergenic 50.0%
CGCAACAGGTCCAAATTTCG+TGG - chr1_1:65700916-65700935 Msa0036870:CDS 50.0%
GAAAGTGGGACCCAGATTGA+AGG + chr1_1:65701851-65701870 None:intergenic 50.0%
GGTCCCACTTTCTCTCCTAT+TGG - chr1_1:65701859-65701878 Msa0036870:intron 50.0%
GGACCCAATAGGAGAGAAAG+TGG + chr1_1:65701866-65701885 None:intergenic 50.0%
CTGTCAGCAGGGATACAACT+AGG + chr1_1:65702484-65702503 None:intergenic 50.0%
CTAGTTGTATCCCTGCTGAC+AGG - chr1_1:65702482-65702501 Msa0036870:intron 50.0%
!!! TTGACGACTGGCTGGTCTTT+TGG + chr1_1:65702922-65702941 None:intergenic 50.0%
AAAAGACCAGCCAGTCGTCA+AGG - chr1_1:65702921-65702940 Msa0036870:CDS 50.0%
CTTTATCCTTGACGACTGGC+TGG + chr1_1:65702930-65702949 None:intergenic 50.0%
GGAAGATCTATCTCTGCCGA+AGG + chr1_1:65703003-65703022 None:intergenic 50.0%
GATCTTCCAGCTGCTGAAGT+TGG - chr1_1:65703015-65703034 Msa0036870:CDS 50.0%
TGAAGATAGCCACTGGGTTC+AGG + chr1_1:65703063-65703082 None:intergenic 50.0%
CCCAGTGGCTATCTTCACAT+TGG - chr1_1:65703066-65703085 Msa0036870:CDS 50.0%
TGCTGAACGATACCAAGGTC+AGG - chr1_1:65703122-65703141 Msa0036870:CDS 50.0%
!! CTTCCCTGAGTTGATGGAAC+TGG - chr1_1:65703266-65703285 Msa0036870:CDS 50.0%
CAGCCAGTTCCATCAACTCA+GGG + chr1_1:65703272-65703291 None:intergenic 50.0%
TCAGCCAGTTCCATCAACTC+AGG + chr1_1:65703273-65703292 None:intergenic 50.0%
CATCAACATACGCCTTACCC+TGG + chr1_1:65703308-65703327 None:intergenic 50.0%
GTTTGCAGTGTTGTGTCCGT+GGG - chr1_1:65703448-65703467 Msa0036870:CDS 50.0%
CCTTGCACTGTAGGAAATCG+TGG + chr1_1:65703810-65703829 None:intergenic 50.0%
CCACGATTTCCTACAGTGCA+AGG - chr1_1:65703807-65703826 Msa0036870:intron 50.0%
CGCACAATTCCTTGCACTGT+AGG + chr1_1:65703819-65703838 None:intergenic 50.0%
GTGCAAGGAATTGTGCGTAG+AGG - chr1_1:65703822-65703841 Msa0036870:intron 50.0%
TCATGGAATGGGACAAGCTC+TGG - chr1_1:65704081-65704100 Msa0036870:intron 50.0%
! CAGTGTGTCTGGGACATACA+GGG + chr1_1:65704130-65704149 None:intergenic 50.0%
GCAATGACAGCAGTGTGTCT+GGG + chr1_1:65704140-65704159 None:intergenic 50.0%
CAGACACACTGCTGTCATTG+CGG - chr1_1:65704139-65704158 Msa0036870:intron 50.0%
CGGTGAGGAAGTAACCTTGA+TGG - chr1_1:65704316-65704335 Msa0036870:CDS 50.0%
GGCATTTCCCCAATCCATCA+AGG + chr1_1:65704333-65704352 None:intergenic 50.0%
GACCAAGATGGGAATGTCAC+AGG - chr1_1:65704374-65704393 Msa0036870:intron 50.0%
ACCCTGTGACATTCCCATCT+TGG + chr1_1:65704379-65704398 None:intergenic 50.0%
GGGAATGTCACAGGGTTAAG+TGG - chr1_1:65704383-65704402 Msa0036870:intron 50.0%
!! CTTGATTAAGTGTCGGTGGC+TGG + chr1_1:65704887-65704906 None:intergenic 50.0%
TGTCACCCACCAATAAGCCT+TGG - chr1_1:65704948-65704967 Msa0036870:intron 50.0%
TCAAGAGAATGGGGTCAGGA+TGG + chr1_1:65705157-65705176 None:intergenic 50.0%
AACAGGGAAGCAAGCAGGTT+TGG + chr1_1:65705389-65705408 None:intergenic 50.0%
TTTGCAGCTTGAGGAAGGAG+AGG - chr1_1:65705428-65705447 Msa0036870:intron 50.0%
!! GCATGGAGAAGTATTGCAGC+TGG - chr1_1:65705527-65705546 Msa0036870:CDS 50.0%
!! ACACGATTGGTTTCGAAGGC+CGG + chr1_1:65705590-65705609 None:intergenic 50.0%
GAATGCCAAACAGTGCCATC+AGG - chr1_1:65705845-65705864 Msa0036870:five_prime_UTR 50.0%
AATGCCCTGATGGCACTGTT+TGG + chr1_1:65705853-65705872 None:intergenic 50.0%
GAATCCGGCGAGTTTGGATG+CGG + chr1_1:65700769-65700788 None:intergenic 55.0%
TGGAGAGAATCCGGCGAGTT+TGG + chr1_1:65700775-65700794 None:intergenic 55.0%
AATGTGGGGACGGAATCAGG+AGG + chr1_1:65700816-65700835 None:intergenic 55.0%
AAGGTTCAGCGTTCGAACCC+CGG - chr1_1:65701176-65701195 Msa0036870:intron 55.0%
GCAGATCTAGCTATCTGGGC+AGG - chr1_1:65702317-65702336 Msa0036870:CDS 55.0%
!!! GACTGGCTGGTCTTTTGGCT+TGG + chr1_1:65702917-65702936 None:intergenic 55.0%
TAAGGGAGGAGGCAAGCCTT+CGG - chr1_1:65702984-65703003 Msa0036870:CDS 55.0%
GGTTTGCAGTGTTGTGTCCG+TGG - chr1_1:65703447-65703466 Msa0036870:CDS 55.0%
GTGTTGTGTCCGTGGGAAGT+TGG - chr1_1:65703455-65703474 Msa0036870:CDS 55.0%
! GCAGTGTGTCTGGGACATAC+AGG + chr1_1:65704131-65704150 None:intergenic 55.0%
CGCAATGACAGCAGTGTGTC+TGG + chr1_1:65704141-65704160 None:intergenic 55.0%
GACGCAGAGTCTGTATCAGC+CGG - chr1_1:65704296-65704315 Msa0036870:CDS 55.0%
AGAGTCTGTATCAGCCGGTG+AGG - chr1_1:65704301-65704320 Msa0036870:CDS 55.0%
!! GATTAAGTGTCGGTGGCTGG+AGG + chr1_1:65704884-65704903 None:intergenic 55.0%
GGTGTGATGTACCCTTCGTC+CGG - chr1_1:65705568-65705587 Msa0036870:CDS 55.0%
ATGTCTGCTGCCTGCCATCT+GGG + chr1_1:65705623-65705642 None:intergenic 55.0%
ATCGCCGCATCCAAACTCGC+CGG - chr1_1:65700762-65700781 Msa0036870:three_prime_UTR 60.0%
!! GGAAGGGAGGTGTCGATGGA+TGG + chr1_1:65700795-65700814 None:intergenic 60.0%
!! AGGAGGAAGGGAGGTGTCGA+TGG + chr1_1:65700799-65700818 None:intergenic 60.0%
GACGGAATCAGGAGGAAGGG+AGG + chr1_1:65700808-65700827 None:intergenic 60.0%
GGGGACGGAATCAGGAGGAA+GGG + chr1_1:65700811-65700830 None:intergenic 60.0%
TGGGGACGGAATCAGGAGGA+AGG + chr1_1:65700812-65700831 None:intergenic 60.0%
! GCAGGGCCTGATGAGAGTAC+AGG + chr1_1:65702221-65702240 None:intergenic 60.0%
GCTATCTGGGCAGGTCTTGC+AGG - chr1_1:65702326-65702345 Msa0036870:CDS 60.0%
CGGTTTGCACCTGAACCCAG+TGG - chr1_1:65703051-65703070 Msa0036870:CDS 60.0%
ATGGGAAGGTGGCTGCCTGA+TGG + chr1_1:65704861-65704880 None:intergenic 60.0%
!! AGTGTCGGTGGCTGGAGGAT+GGG + chr1_1:65704879-65704898 None:intergenic 60.0%
!! AAGTGTCGGTGGCTGGAGGA+TGG + chr1_1:65704880-65704899 None:intergenic 60.0%
GATAGAGAGGTGGGGGCCAA+GGG + chr1_1:65704923-65704942 None:intergenic 60.0%
TGATAGAGAGGTGGGGGCCA+AGG + chr1_1:65704924-65704943 None:intergenic 60.0%
GGTTTCGAAGGCCGGACGAA+GGG + chr1_1:65705582-65705601 None:intergenic 60.0%
TGGTTTCGAAGGCCGGACGA+AGG + chr1_1:65705583-65705602 None:intergenic 60.0%
GATGTCTGCTGCCTGCCATC+TGG + chr1_1:65705624-65705643 None:intergenic 60.0%
GATGCGGCGATCCCCGCTAA+CGG + chr1_1:65700753-65700772 None:intergenic 65.0%
GTGGCTGGAGGATGGGAAGG+TGG + chr1_1:65704872-65704891 None:intergenic 65.0%
TCGGTGGCTGGAGGATGGGA+AGG + chr1_1:65704875-65704894 None:intergenic 65.0%
GTGGGGGCCAAGGGAGTTGA+TGG + chr1_1:65704914-65704933 None:intergenic 65.0%
CGCGGCGGCGGAGAAGGAAA+GGG + chr1_1:65700727-65700746 None:intergenic 70.0%
GATCCCCGCTAACGGTGGCG+CGG + chr1_1:65700745-65700764 None:intergenic 70.0%
GCGCGGCGGCGGAGAAGGAA+AGG + chr1_1:65700728-65700747 None:intergenic 75.0%
GCGGCGATCCCCGCTAACGG+TGG + chr1_1:65700750-65700769 None:intergenic 75.0%
! CGCTAACGGTGGCGCGGCGG+CGG + chr1_1:65700739-65700758 None:intergenic 80.0%
! CGCCGCCGCGCCACCGTTAG+CGG - chr1_1:65700737-65700756 Msa0036870:three_prime_UTR 80.0%
! GCCGCCGCGCCACCGTTAGC+GGG - chr1_1:65700738-65700757 Msa0036870:three_prime_UTR 80.0%
! CCCCGCTAACGGTGGCGCGG+CGG + chr1_1:65700742-65700761 None:intergenic 80.0%
! CCGCCGCGCCACCGTTAGCG+GGG - chr1_1:65700739-65700758 Msa0036870:three_prime_UTR 80.0%
! CGGTGGCGCGGCGGCGGAGA+AGG + chr1_1:65700733-65700752 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 65700590 65705955 65700590 ID=Msa0036870;Name=Msa0036870
chr1_1 mRNA 65700590 65705955 65700590 ID=Msa0036870-mRNA-1;Parent=Msa0036870;Name=Msa0036870-mRNA-1;_AED=0.04;_eAED=0.04;_QI=115|1|1|1|1|1|6|302|735
chr1_1 exon 65700590 65701110 65700590 ID=Msa0036870-mRNA-1:exon:21194;Parent=Msa0036870-mRNA-1
chr1_1 exon 65702019 65702486 65702019 ID=Msa0036870-mRNA-1:exon:21193;Parent=Msa0036870-mRNA-1
chr1_1 exon 65702661 65703784 65702661 ID=Msa0036870-mRNA-1:exon:21192;Parent=Msa0036870-mRNA-1
chr1_1 exon 65704198 65704351 65704198 ID=Msa0036870-mRNA-1:exon:21191;Parent=Msa0036870-mRNA-1
chr1_1 exon 65705525 65705621 65705525 ID=Msa0036870-mRNA-1:exon:21190;Parent=Msa0036870-mRNA-1
chr1_1 exon 65705695 65705955 65705695 ID=Msa0036870-mRNA-1:exon:21189;Parent=Msa0036870-mRNA-1
chr1_1 five_prime_UTR 65705841 65705955 65705841 ID=Msa0036870-mRNA-1:five_prime_utr;Parent=Msa0036870-mRNA-1
chr1_1 CDS 65705695 65705840 65705695 ID=Msa0036870-mRNA-1:cds;Parent=Msa0036870-mRNA-1
chr1_1 CDS 65705525 65705621 65705525 ID=Msa0036870-mRNA-1:cds;Parent=Msa0036870-mRNA-1
chr1_1 CDS 65704198 65704351 65704198 ID=Msa0036870-mRNA-1:cds;Parent=Msa0036870-mRNA-1
chr1_1 CDS 65702661 65703784 65702661 ID=Msa0036870-mRNA-1:cds;Parent=Msa0036870-mRNA-1
chr1_1 CDS 65702019 65702486 65702019 ID=Msa0036870-mRNA-1:cds;Parent=Msa0036870-mRNA-1
chr1_1 CDS 65700892 65701110 65700892 ID=Msa0036870-mRNA-1:cds;Parent=Msa0036870-mRNA-1
chr1_1 three_prime_UTR 65700590 65700891 65700590 ID=Msa0036870-mRNA-1:three_prime_utr;Parent=Msa0036870-mRNA-1
Gene Sequence

>Msa0036870

ATGGATATCAAAATCAAAACCCTTTCCTTCTCCGCCGCCGCGCCACCGTTAGCGGGGATCGCCGCATCCAAACTCGCCGGATTCTCTCCATCCATCGACACCTCCCTTCCTCCTGATTCCGTCCCCACATTTCTCTTGTCCAACGGGTCCAAATTTCGTGGAGCATTTGTTCTTCTGCGTCACATTGGAAGAACTGCAACCCTTCCTAATTTCTATGGCCAAAATGATTTAGAAGCTTGCCAGATTGATGAATTGCTAGAGTATGCACCTGTACTCTCATCAGGCCCTGCTTTTGAAAATGGATGCAAGTATATTGATGACTACTTGGAGAAGCGTACATTTTTAGTTGGTTATTCGTTATCAATTGCAGATCTAGCTATCTGGGCAGGTCTTGCAGGTGCTGGAAAGAGATGGGAAAGCTTGAGGAAATCAAAGAAATATCAAAATCTTGCACGATGGTACAATTCAATAGTTGCAGAACATGGTACTGCGTTAAACGAAGTCACAGCAACATATATTGGCAAAAAAGGAGTGGGAGAACCATCTGCAACCAAGCCAAAAGACCAGCCAGTCGTCAAGGATAAAGTAAAGAATGTGAATGGGGATGTTTCTGATAACATTAAGGGAGGAGGCAAGCCTTCGGCAGAGATAGATCTTCCAGCTGCTGAAGTTGGAAAAGTTCGCTTGCGGTTTGCACCTGAACCCAGTGGCTATCTTCACATTGGACACTCAAAAGCAGCTCTGTTGAACAAGTATTTTGCTGAACGATACCAAGGTCAGGTTATTTTGCGTTTCGATGATACAAATCCTGCTAAAGAAAGTAATGAATTTGTGGACAATTTGATAAAAGATGTTGAGACGTTGGGGGTCAAATATGAAAGAATTACATATACATCAGATTACTTCCCTGAGTTGATGGAACTGGCTGAAAAATTAATTAGCCAGGGTAAGGCGTATGTTGATGACACTCCACGTGAACAAATGCAAAAGGAGAGAATGGATGGCATAGAATCTAAATGCAGAAACCATAGTGTTGAGGAGAATTTGAAATTATGGAAGGAAATGATTGCAGGATCAGAGAGGGGTTTGCAGTGTTGTGTCCGTGGGAAGTTGGATATGCAAGATCCAAACAAATCACTCCGTGATCCTGTTTATTATCGTTGCAATCCAATGCCTCATCATAGAATTGGGTCCAAGTATAAAGTGTATCCAACTTATGATTTTGCTTGTCCATTTGTTGATGCTCATGAAGGTATCACTCATGCCCTTCGGTCAAGTGAATACCATGATCGTAATGCTCAGTATTACAGGATTCAAGCGGACATGGGCGTTACGAGAGTTCTCATCTACGAATTTAGCCGGTTGAATATGGTCTACACTCTTCTCAGCAAACGAAAGCTTCTATGGTTTGTCCAAAATGGAAAAGTTGAATCATGGGATGATCCACGATTTCCTACAGTGCAAGGAATTGTGCGTAGAGGCTTGAAAATTGAAGCGCTAATCCAATTTATTGTTGAACAAGGGGCATCAAAAAATCTCAATCTCATGGAATGGGACAAGCTCTGGACCATCAATAAGAAGATTATTGACCCTGTATGTCCCAGACACACTGCTGTCATTGCGGATAGACGTGTATTGTTAACCCTCACTGATGGTCCTGAGAAATCATTTGTCCGCATCATACCTAGGCACAAAAAGTATGAAGCTGCTGGGAATAAAGCTACCACATATACAAAAAGGATATGGATTGACTATGCTGACGCAGAGTCTGTATCAGCCGGTGAGGAAGTAACCTTGATGGATTGGGGAAATGCCATAGTAAAGGAAGTAGAGAAGGACCAAGATGGGAATGTCACAGGGTTAAGTGGTGTTTTACATCTTGAAGGATCTGTGAAGACCACAAAACTGAAGCTCACTTGGCTACCTGAGTTAGATGAATTAGTTAGCCTGACATTGATGGAGTTTGATTACCTCATTACGAAGAAAAAGCTTGAGGAAGGAGAGGATTTCATTGATGTGCTTAACCCTTGCACAAAAAAGGAGACTCTAGCATATGGAGATTCCAATATGCGAAATCTTAAGCATGGAGAAGTATTGCAGCTGGAGAGAAAGGGATATTTCAGGTGTGATGTACCCTTCGTCCGGCCTTCGAAACCAATCGTGTTATTTGCAATCCCAGATGGCAGGCAGCAGACATCTTTGAAGTAA
Protein sequence

>Msa0036870

MDIKIKTLSFSAAAPPLAGIAASKLAGFSPSIDTSLPPDSVPTFLLSNGSKFRGAFVLLRHIGRTATLPNFYGQNDLEACQIDELLEYAPVLSSGPAFENGCKYIDDYLEKRTFLVGYSLSIADLAIWAGLAGAGKRWESLRKSKKYQNLARWYNSIVAEHGTALNEVTATYIGKKGVGEPSATKPKDQPVVKDKVKNVNGDVSDNIKGGGKPSAEIDLPAAEVGKVRLRFAPEPSGYLHIGHSKAALLNKYFAERYQGQVILRFDDTNPAKESNEFVDNLIKDVETLGVKYERITYTSDYFPELMELAEKLISQGKAYVDDTPREQMQKERMDGIESKCRNHSVEENLKLWKEMIAGSERGLQCCVRGKLDMQDPNKSLRDPVYYRCNPMPHHRIGSKYKVYPTYDFACPFVDAHEGITHALRSSEYHDRNAQYYRIQADMGVTRVLIYEFSRLNMVYTLLSKRKLLWFVQNGKVESWDDPRFPTVQGIVRRGLKIEALIQFIVEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIADRRVLLTLTDGPEKSFVRIIPRHKKYEAAGNKATTYTKRIWIDYADAESVSAGEEVTLMDWGNAIVKEVEKDQDGNVTGLSGVLHLEGSVKTTKLKLTWLPELDELVSLTLMEFDYLITKKKLEEGEDFIDVLNPCTKKETLAYGDSNMRNLKHGEVLQLERKGYFRCDVPFVRPSKPIVLFAIPDGRQQTSLK*