AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0248570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248570 MtrunA17_Chr2g0303701 93.881 572 12 3 1 552 1 569 0.0 1014
Msa0248570 MtrunA17_Chr2g0303731 72.049 576 132 7 1 552 1 571 0.0 837
Msa0248570 MtrunA17_Chr8g0376631 72.648 574 130 5 1 551 1 570 0.0 803
Msa0248570 MtrunA17_Chr8g0376601 68.431 548 145 6 1 525 1 543 0.0 729
Msa0248570 MtrunA17_Chr8g0376611 71.600 500 113 5 70 546 3 496 0.0 702
Msa0248570 MtrunA17_Chr2g0290181 55.379 567 223 5 2 542 3 565 0.0 600
Msa0248570 MtrunA17_Chr2g0290161 47.800 500 209 6 67 542 1 472 1.75e-144 425
Msa0248570 MtrunA17_Chr7g0214451 52.676 355 140 2 6 340 21 367 5.67e-116 352
Msa0248570 MtrunA17_Chr7g0214451 56.667 120 50 1 419 536 363 482 2.16e-38 147
Msa0248570 MtrunA17_Chr1g0213611 53.125 352 137 2 6 337 66 409 7.90e-114 348
Msa0248570 MtrunA17_Chr1g0213611 56.481 108 47 0 429 536 424 531 4.03e-36 142
Msa0248570 MtrunA17_Chr5g0434261 50.986 355 107 7 188 525 1 305 7.62e-111 333
Msa0248570 MtrunA17_Chr1g0213631 51.757 313 131 1 45 337 4 316 4.98e-96 300
Msa0248570 MtrunA17_Chr1g0213631 55.172 116 51 1 422 536 320 435 5.46e-36 140
Msa0248570 MtrunA17_Chr5g0434251 71.622 148 42 0 399 546 5 152 3.30e-78 243
Msa0248570 MtrunA17_Chr6g0450271 67.857 196 54 4 203 395 32 221 1.13e-74 237
Msa0248570 MtrunA17_Chr6g0450291 68.421 171 45 4 228 395 1 165 9.41e-64 206
Msa0248570 MtrunA17_Chr6g0450281 68.421 171 45 4 228 395 1 165 1.68e-63 206
Msa0248570 MtrunA17_Chr6g0450241 67.836 171 46 4 228 395 1 165 7.28e-63 204
Msa0248570 MtrunA17_Chr5g0434231 60.694 173 24 2 70 222 6 154 3.20e-56 186
Msa0248570 MtrunA17_Chr5g0434241 80.198 101 17 1 228 325 1 101 6.80e-47 159
Msa0248570 MtrunA17_Chr2g0282031 34.036 332 190 4 25 330 52 380 1.76e-46 170
Msa0248570 MtrunA17_Chr2g0282031 40.385 104 62 0 432 535 399 502 8.01e-15 77.4
Msa0248570 MtrunA17_Chr7g0250881 34.154 325 187 4 33 337 72 389 4.13e-44 163
Msa0248570 MtrunA17_Chr6g0457781 34.462 325 186 4 33 337 112 429 8.20e-44 163
Msa0248570 MtrunA17_Chr5g0394341 33.628 339 177 8 24 320 20 352 1.06e-43 162
Msa0248570 MtrunA17_Chr4g0036021 30.226 354 203 7 22 337 23 370 8.70e-43 160
Msa0248570 MtrunA17_Chr4g0036021 38.596 114 64 1 432 545 386 493 3.02e-12 68.9
Msa0248570 MtrunA17_Chr5g0437021 31.642 335 187 6 24 320 21 351 1.13e-41 157
Msa0248570 MtrunA17_Chr1g0164851 31.845 336 187 6 23 320 20 351 1.83e-41 157
Msa0248570 MtrunA17_Chr1g0164871 31.940 335 186 6 24 320 21 351 2.19e-41 156
Msa0248570 MtrunA17_Chr8g0390141 32.551 341 186 8 21 320 18 355 8.03e-41 154
Msa0248570 MtrunA17_Chr6g0485661 31.445 353 210 6 7 330 37 386 5.48e-40 152
Msa0248570 MtrunA17_Chr1g0205671 30.499 341 186 9 23 320 20 352 9.83e-40 151
Msa0248570 MtrunA17_Chr5g0432581 32.687 361 199 9 23 344 16 371 1.95e-39 150
Msa0248570 MtrunA17_Chr5g0432581 37.383 107 63 2 432 536 381 485 8.39e-13 70.9
Msa0248570 MtrunA17_Chr1g0205681 31.928 332 174 9 33 320 30 353 3.31e-39 149
Msa0248570 MtrunA17_Chr4g0048051 33.136 338 179 8 24 320 21 352 6.40e-39 149
Msa0248570 MtrunA17_Chr4g0034681 30.084 359 198 8 22 337 26 374 8.02e-39 149
Msa0248570 MtrunA17_Chr4g0034681 33.929 112 68 1 440 551 398 503 6.43e-11 65.1
Msa0248570 MtrunA17_Chr1g0205691 32.558 344 186 9 33 335 29 367 1.66e-38 148
Msa0248570 MtrunA17_Chr4g0048411 32.344 337 183 7 24 320 21 352 1.68e-38 148
Msa0248570 MtrunA17_Chr4g0021771 32.000 350 206 7 25 347 54 398 3.20e-38 147
Msa0248570 MtrunA17_Chr4g0021771 39.815 108 60 1 434 536 398 505 6.96e-15 77.4
Msa0248570 MtrunA17_Chr3g0144361 29.006 362 208 6 20 337 18 374 6.49e-38 146
Msa0248570 MtrunA17_Chr8g0373531 32.464 345 190 8 23 328 16 356 2.35e-37 144
Msa0248570 MtrunA17_Chr8g0373531 37.143 105 66 0 432 536 381 485 4.00e-14 75.1
Msa0248570 MtrunA17_Chr8g0390521 32.047 337 197 6 23 330 15 348 2.72e-37 144
Msa0248570 MtrunA17_Chr4g0065311 31.180 356 197 10 1 318 1 346 5.88e-37 143
Msa0248570 MtrunA17_Chr3g0121674 53.982 113 50 1 426 536 177 289 8.83e-37 138
Msa0248570 MtrunA17_Chr3g0121674 42.484 153 83 1 182 334 20 167 1.73e-35 135
Msa0248570 MtrunA17_Chr4g0032021 30.362 359 205 8 20 338 92 445 1.66e-36 143
Msa0248570 MtrunA17_Chr4g0032021 39.423 104 63 0 432 535 453 556 1.76e-14 76.3
Msa0248570 MtrunA17_Chr4g0039651 30.448 335 193 7 36 333 55 386 2.23e-36 142
Msa0248570 MtrunA17_Chr4g0039651 34.286 105 69 0 427 531 394 498 1.60e-11 66.6
Msa0248570 MtrunA17_Chr5g0417611 30.060 336 191 8 23 318 20 351 4.40e-36 141
Msa0248570 MtrunA17_Chr8g0376621 86.765 68 9 0 1 68 1 68 4.48e-35 126
Msa0248570 MtrunA17_Chr5g0445601 31.024 332 188 8 24 318 25 352 7.20e-35 137
Msa0248570 MtrunA17_Chr7g0257631 30.816 331 188 7 25 318 60 386 3.27e-34 136
Msa0248570 MtrunA17_Chr5g0434221 85.294 68 10 0 1 68 1 68 5.33e-34 123
Msa0248570 MtrunA17_Chr8g0390261 30.982 326 180 9 35 320 35 355 1.33e-33 134
Msa0248570 MtrunA17_Chr5g0420841 29.446 343 198 8 33 335 28 366 5.80e-33 132
Msa0248570 MtrunA17_Chr4g0065324 31.579 323 180 8 33 318 36 354 6.88e-33 132
Msa0248570 MtrunA17_Chr6g0486681 30.539 334 191 8 35 330 35 365 2.28e-32 130
Msa0248570 MtrunA17_Chr6g0486671 30.539 334 191 8 35 330 35 365 2.28e-32 130
Msa0248570 MtrunA17_Chr3g0115711 29.448 326 181 7 37 321 34 351 1.38e-31 128
Msa0248570 MtrunA17_Chr3g0115721 29.640 361 206 10 37 359 34 384 3.18e-31 127
Msa0248570 MtrunA17_Chr3g0128081 29.552 335 192 8 26 320 22 352 3.86e-31 127
Msa0248570 MtrunA17_Chr3g0119401 29.429 333 200 6 24 333 95 415 6.50e-31 126
Msa0248570 MtrunA17_Chr3g0085971 29.305 331 184 8 33 320 28 351 1.68e-30 125
Msa0248570 MtrunA17_Chr3g0115741 27.859 341 196 9 37 336 37 368 1.12e-29 122
Msa0248570 MtrunA17_Chr3g0115751 29.721 323 187 7 33 318 35 354 3.90e-29 120
Msa0248570 MtrunA17_Chr3g0078991 28.107 338 198 7 25 321 22 355 4.85e-29 120
Msa0248570 MtrunA17_Chr3g0115781 30.473 338 191 9 37 336 36 367 8.11e-29 120
Msa0248570 MtrunA17_Chr1g0155221 30.714 280 165 7 78 337 98 368 1.03e-28 119
Msa0248570 MtrunA17_Chr1g0155221 30.645 124 74 3 418 534 371 489 2.00e-11 66.2
Msa0248570 MtrunA17_Chr3g0128171 30.224 268 161 5 73 318 40 303 4.11e-28 117
Msa0248570 MtrunA17_Chr5g0403831 27.451 357 219 6 16 335 21 374 1.08e-27 116
Msa0248570 MtrunA17_Chr3g0078971 29.499 339 189 9 23 318 20 351 2.49e-27 115
Msa0248570 MtrunA17_Chr5g0407441 30.493 223 132 3 26 226 4 225 1.44e-26 114
Msa0248570 MtrunA17_Chr5g0407441 35.417 96 62 0 432 527 608 703 4.65e-11 65.9
Msa0248570 MtrunA17_Chr6g0486021 28.739 341 209 7 14 332 40 368 2.09e-26 112
Msa0248570 MtrunA17_Chr3g0144261 30.909 220 127 3 29 226 7 223 2.09e-26 114
Msa0248570 MtrunA17_Chr3g0144261 35.417 96 62 0 432 527 616 711 7.43e-14 74.7
Msa0248570 MtrunA17_Chr4g0004821 28.267 329 212 7 21 332 33 354 4.89e-25 108
Msa0248570 MtrunA17_Chr7g0273281 27.241 290 173 6 78 343 111 386 9.44e-25 107
Msa0248570 MtrunA17_Chr7g0273281 32.381 105 70 1 432 536 395 498 3.21e-11 65.9
Msa0248570 MtrunA17_Chr8g0373181 30.389 283 162 7 78 337 96 366 3.24e-24 105
Msa0248570 MtrunA17_Chr8g0373181 35.238 105 65 2 427 530 380 482 8.04e-12 67.8
Msa0248570 MtrunA17_Chr2g0286721 28.369 282 169 7 78 337 98 368 5.38e-24 105
Msa0248570 MtrunA17_Chr2g0286721 30.769 156 103 3 379 531 328 481 5.54e-12 68.2
Msa0248570 MtrunA17_Chr8g0370141 29.279 222 132 4 26 224 4 223 5.89e-24 103
Msa0248570 MtrunA17_Chr3g0146061 32.243 214 120 4 36 226 14 225 1.14e-23 105
Msa0248570 MtrunA17_Chr3g0146061 35.417 96 62 0 432 527 626 721 1.83e-13 73.6
Msa0248570 MtrunA17_Chr7g0259471 28.875 329 212 6 24 337 37 358 3.39e-23 102
Msa0248570 MtrunA17_Chr7g0259471 37.383 107 58 2 432 534 373 474 4.47e-13 71.6
Msa0248570 MtrunA17_Chr4g0066581 27.046 281 174 7 78 337 101 371 2.51e-22 100
Msa0248570 MtrunA17_Chr4g0066581 36.893 103 64 1 432 534 386 487 9.09e-13 70.5
Msa0248570 MtrunA17_Chr7g0259221 29.562 274 175 4 78 337 91 360 1.08e-21 98.2
Msa0248570 MtrunA17_Chr7g0259221 35.922 103 65 1 432 534 375 476 9.76e-13 70.5
Msa0248570 MtrunA17_Chr2g0290171 62.687 67 22 1 2 68 3 66 1.24e-20 85.9
Msa0248570 MtrunA17_Chr5g0419321 29.648 199 117 3 48 224 54 251 1.27e-19 92.8
Msa0248570 MtrunA17_Chr3g0078791 28.400 250 133 5 93 320 52 277 2.77e-19 90.5
Msa0248570 MtrunA17_Chr8g0373191 28.522 291 147 9 73 337 83 338 3.32e-19 90.5
Msa0248570 MtrunA17_Chr3g0115731 27.568 370 181 14 37 359 34 363 2.76e-18 87.8
Msa0248570 MtrunA17_Chr5g0404191 30.058 173 106 3 73 235 94 261 2.31e-14 73.9
Msa0248570 MtrunA17_Chr7g0273261 35.338 133 84 2 403 534 107 238 3.00e-14 73.2
Msa0248570 MtrunA17_Chr5g0404181 35.238 105 65 2 427 530 26 128 5.91e-14 68.9
Msa0248570 MtrunA17_Chr8g0370151 33.333 120 70 1 432 551 247 356 1.13e-11 66.6
Msa0248570 MtrunA17_Chr4g0065351 27.083 192 115 5 148 318 2 189 1.42e-11 66.2
Msa0248570 MtrunA17_Chr4g0065341 33.333 129 70 3 25 137 26 154 1.46e-11 63.2
Msa0248570 MtrunA17_Chr5g0446681 31.788 151 84 4 33 183 29 160 3.22e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0248570 AT1G30220.1 64.818 577 176 5 1 552 1 575 0.0 756
Msa0248570 AT4G16480.2 55.203 567 220 6 1 537 2 564 0.0 598
Msa0248570 AT4G16480.3 55.203 567 220 6 1 537 2 564 0.0 598
Msa0248570 AT4G16480.1 55.203 567 220 6 1 537 2 564 0.0 598
Msa0248570 AT2G35740.1 53.407 543 221 5 24 537 24 563 0.0 584
Msa0248570 AT2G43330.1 51.821 357 143 3 6 341 19 367 1.60e-106 329
Msa0248570 AT2G43330.1 58.333 108 45 0 429 536 375 482 1.26e-37 145
Msa0248570 AT1G07340.1 32.716 324 179 6 33 320 30 350 6.94e-45 166
Msa0248570 AT4G36670.1 32.471 348 195 6 23 333 14 358 1.98e-44 164
Msa0248570 AT4G36670.1 38.462 104 64 0 432 535 378 481 1.32e-14 77.0
Msa0248570 AT3G19940.1 33.433 335 179 7 25 320 24 353 3.26e-43 161
Msa0248570 AT1G50310.1 31.737 334 187 6 25 320 24 354 1.53e-42 159
Msa0248570 AT3G05960.1 31.653 357 194 10 5 322 5 350 3.11e-42 159
Msa0248570 AT5G26250.1 32.143 336 185 9 25 322 21 351 4.98e-41 155
Msa0248570 AT2G20780.1 31.778 343 205 6 20 337 49 387 1.36e-40 154
Msa0248570 AT2G20780.1 38.095 105 60 1 435 534 397 501 4.10e-14 75.5
Msa0248570 AT3G18830.1 30.791 354 195 7 22 333 32 377 1.42e-40 154
Msa0248570 AT2G18480.1 33.053 357 193 9 23 337 15 367 3.11e-40 153
Msa0248570 AT2G18480.1 40.196 102 61 0 432 533 382 483 6.50e-16 80.9
Msa0248570 AT5G59250.1 30.997 371 211 10 8 338 82 447 1.53e-38 149
Msa0248570 AT5G59250.1 39.815 108 65 0 428 535 451 558 2.32e-14 76.3
Msa0248570 AT5G16150.2 33.974 312 179 4 35 326 114 418 1.92e-38 149
Msa0248570 AT5G16150.1 33.974 312 179 4 35 326 114 418 1.92e-38 149
Msa0248570 AT5G16150.3 33.974 312 179 4 35 326 114 418 1.92e-38 149
Msa0248570 AT1G11260.1 31.195 343 181 8 23 320 20 352 2.88e-38 147
Msa0248570 AT5G26340.1 31.065 338 187 8 24 320 21 353 1.01e-36 143
Msa0248570 AT2G16120.1 29.513 349 206 5 22 333 22 367 4.17e-36 141
Msa0248570 AT5G23270.1 31.953 338 182 8 25 320 23 354 6.95e-36 140
Msa0248570 AT2G16130.1 29.683 347 200 6 28 333 24 367 9.44e-35 137
Msa0248570 AT2G16130.1 33.333 102 68 0 432 533 388 489 8.93e-12 68.2
Msa0248570 AT1G05030.1 31.173 324 191 6 33 333 86 400 6.72e-34 135
Msa0248570 AT5G17010.1 30.636 346 197 11 26 333 48 388 6.73e-34 135
Msa0248570 AT5G17010.3 30.636 346 197 11 26 333 48 388 6.73e-34 135
Msa0248570 AT5G17010.4 30.636 346 197 11 26 333 48 388 6.73e-34 135
Msa0248570 AT3G19930.1 29.552 335 194 6 24 320 21 351 1.44e-33 134
Msa0248570 AT3G19930.2 29.552 335 194 6 24 320 21 351 1.44e-33 134
Msa0248570 AT1G77210.2 28.291 357 208 7 2 320 9 355 1.99e-33 134
Msa0248570 AT1G77210.1 28.291 357 208 7 2 320 9 355 1.99e-33 134
Msa0248570 AT3G03090.1 29.762 336 196 9 35 333 56 388 3.44e-33 133
Msa0248570 AT3G03090.1 34.615 104 68 0 428 531 397 500 3.63e-11 66.2
Msa0248570 AT4G21480.1 30.746 335 187 7 25 320 22 350 4.93e-33 132
Msa0248570 AT4G02050.2 29.429 333 190 9 25 318 26 352 7.41e-31 126
Msa0248570 AT4G02050.1 29.429 333 190 9 25 318 26 352 7.41e-31 126
Msa0248570 AT2G20780.2 30.240 334 199 8 31 337 3 329 2.39e-30 124
Msa0248570 AT2G20780.2 38.095 105 60 1 435 534 339 443 8.79e-14 74.3
Msa0248570 AT1G05030.2 30.547 311 184 6 46 333 47 348 7.16e-30 123
Msa0248570 AT5G61520.1 25.789 380 235 6 7 343 5 380 2.67e-29 122
Msa0248570 AT3G51490.2 30.804 224 130 4 26 226 4 225 1.37e-28 121
Msa0248570 AT3G51490.2 37.500 96 60 0 432 527 619 714 6.99e-13 72.0
Msa0248570 AT3G51490.1 30.804 224 130 4 26 226 4 225 1.47e-28 120
Msa0248570 AT3G51490.1 37.500 96 60 0 432 527 611 706 6.71e-13 72.0
Msa0248570 AT1G34580.1 28.972 321 187 6 37 318 35 353 1.87e-28 119
Msa0248570 AT2G48020.4 28.994 338 204 8 22 337 23 346 1.90e-26 111
Msa0248570 AT5G18840.1 31.802 283 158 8 78 337 93 363 2.41e-26 112
Msa0248570 AT5G18840.1 33.071 127 81 2 413 536 356 481 2.91e-12 69.3
Msa0248570 AT4G35300.9 32.864 213 120 3 36 226 14 225 2.71e-26 114
Msa0248570 AT4G35300.9 40.625 96 57 0 432 527 615 710 1.80e-15 80.1
Msa0248570 AT4G35300.2 32.864 213 120 3 36 226 14 225 2.71e-26 114
Msa0248570 AT4G35300.2 40.625 96 57 0 432 527 615 710 1.80e-15 80.1
Msa0248570 AT4G35300.3 32.864 213 120 3 36 226 14 225 2.71e-26 114
Msa0248570 AT4G35300.3 40.625 96 57 0 432 527 615 710 1.80e-15 80.1
Msa0248570 AT2G48020.2 28.994 338 204 8 22 337 23 346 3.10e-26 112
Msa0248570 AT2G48020.2 39.806 103 61 1 432 534 361 462 2.13e-15 79.3
Msa0248570 AT2G48020.1 28.994 338 204 8 22 337 23 346 3.10e-26 112
Msa0248570 AT2G48020.1 39.806 103 61 1 432 534 361 462 2.13e-15 79.3
Msa0248570 AT4G35300.4 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.4 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT4G35300.8 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.8 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT4G35300.6 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.6 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT4G35300.11 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.11 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT4G35300.1 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.1 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT4G35300.10 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.10 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT4G35300.7 32.864 213 120 3 36 226 14 225 3.12e-26 114
Msa0248570 AT4G35300.7 40.625 96 57 0 432 527 625 720 1.80e-15 80.1
Msa0248570 AT1G67300.2 27.479 353 226 9 4 335 31 374 7.64e-26 111
Msa0248570 AT5G61520.2 26.846 298 193 4 67 343 39 332 2.13e-25 109
Msa0248570 AT1G20840.2 30.263 228 132 4 29 233 7 230 2.28e-25 111
Msa0248570 AT1G20840.2 38.462 91 56 0 437 527 623 713 7.53e-14 75.1
Msa0248570 AT1G20840.1 30.263 228 132 4 29 233 7 230 2.28e-25 111
Msa0248570 AT1G20840.1 38.462 91 56 0 437 527 623 713 7.53e-14 75.1
Msa0248570 AT1G67300.4 26.857 350 226 9 4 332 31 371 2.41e-25 109
Msa0248570 AT1G67300.5 26.857 350 226 9 4 332 31 371 2.41e-25 109
Msa0248570 AT1G19450.1 29.431 299 177 8 78 356 98 382 2.56e-25 109
Msa0248570 AT1G67300.6 26.857 350 226 9 4 332 31 371 2.73e-25 109
Msa0248570 AT1G67300.7 26.857 350 226 9 4 332 31 371 2.73e-25 109
Msa0248570 AT1G67300.1 26.857 350 226 9 4 332 31 371 3.29e-25 109
Msa0248570 AT1G67300.3 26.857 350 226 9 4 332 31 371 3.29e-25 109
Msa0248570 AT1G75220.1 29.167 288 175 7 78 345 97 375 4.62e-25 108
Msa0248570 AT1G75220.1 31.193 109 71 2 429 534 380 487 1.33e-11 67.4
Msa0248570 AT1G34580.2 28.146 302 179 5 53 318 4 303 5.14e-25 108
Msa0248570 AT1G79820.4 26.590 346 220 7 14 337 44 377 5.79e-25 108
Msa0248570 AT3G05150.1 31.673 281 161 9 78 337 84 354 6.21e-25 108
Msa0248570 AT3G05150.1 38.235 102 62 1 432 533 369 469 3.05e-15 79.0
Msa0248570 AT3G05150.3 31.673 281 161 9 78 337 84 354 6.21e-25 108
Msa0248570 AT3G05150.3 38.235 102 62 1 432 533 369 469 3.05e-15 79.0
Msa0248570 AT3G05150.2 31.673 281 161 9 78 337 84 354 6.90e-25 108
Msa0248570 AT3G05150.2 38.095 105 64 1 432 536 369 472 2.30e-15 79.3
Msa0248570 AT1G54730.2 24.078 461 263 10 78 530 81 462 8.34e-25 108
Msa0248570 AT1G79820.2 26.590 346 220 7 14 337 44 377 1.65e-24 107
Msa0248570 AT1G79820.1 26.590 346 220 7 14 337 44 377 1.65e-24 107
Msa0248570 AT1G54730.3 28.470 281 169 6 78 337 81 350 3.93e-24 105
Msa0248570 AT1G54730.9 28.470 281 169 6 78 337 81 350 6.90e-24 104
Msa0248570 AT1G54730.7 28.470 281 169 6 78 337 81 350 6.90e-24 104
Msa0248570 AT3G05155.1 28.531 354 203 9 78 408 76 402 2.12e-23 103
Msa0248570 AT3G05155.1 33.333 99 65 1 432 530 358 455 9.46e-13 70.9
Msa0248570 AT2G48020.3 28.483 323 195 8 22 322 23 331 2.38e-23 102
Msa0248570 AT3G05400.1 30.208 288 175 8 73 342 70 349 1.50e-22 101
Msa0248570 AT1G50310.2 31.527 203 115 4 139 320 12 211 1.74e-22 99.8
Msa0248570 AT3G05155.2 30.712 267 146 8 78 321 76 326 3.78e-22 98.2
Msa0248570 AT1G54730.11 27.925 265 159 6 78 321 81 334 1.03e-21 97.1
Msa0248570 AT5G17010.2 35.260 173 99 3 26 188 45 214 2.04e-21 97.4
Msa0248570 AT1G08930.1 27.622 286 165 8 78 337 107 376 2.81e-21 97.4
Msa0248570 AT1G08930.2 27.622 286 165 8 78 337 107 376 2.81e-21 97.4
Msa0248570 AT5G27360.3 28.313 332 207 6 31 343 88 407 3.62e-21 97.4
Msa0248570 AT5G27360.3 32.353 102 68 1 435 536 419 519 4.22e-11 65.9
Msa0248570 AT5G27360.4 28.834 326 201 6 31 337 40 353 5.31e-21 96.3
Msa0248570 AT5G27360.1 28.313 332 207 6 31 343 40 359 6.66e-21 96.3
Msa0248570 AT5G27360.1 33.333 99 65 1 435 533 371 468 3.62e-11 65.9
Msa0248570 AT3G05160.1 27.622 286 177 6 78 343 70 345 1.59e-20 95.1
Msa0248570 AT3G05160.1 34.343 99 64 1 435 533 357 454 7.54e-11 65.1
Msa0248570 AT3G05165.3 27.273 286 178 6 78 343 79 354 2.00e-20 94.7
Msa0248570 AT3G05165.2 27.273 286 178 6 78 343 79 354 2.00e-20 94.7
Msa0248570 AT3G05165.1 27.273 286 178 6 78 343 79 354 2.00e-20 94.7
Msa0248570 AT3G05160.3 27.622 286 177 6 78 343 21 296 2.02e-20 94.4
Msa0248570 AT3G05160.3 34.343 99 64 1 435 533 308 405 9.89e-11 64.3
Msa0248570 AT3G05160.2 27.622 286 177 6 78 343 21 296 2.02e-20 94.4
Msa0248570 AT3G05160.2 34.343 99 64 1 435 533 308 405 9.89e-11 64.3
Msa0248570 AT3G05165.4 27.273 286 178 6 78 343 79 354 2.44e-20 94.4
Msa0248570 AT3G05165.5 27.273 286 178 6 78 343 79 354 2.44e-20 94.4
Msa0248570 AT3G05165.6 27.083 288 176 7 78 343 79 354 3.10e-20 94.4
Msa0248570 AT1G54730.4 27.599 279 166 8 78 328 81 351 7.84e-19 89.4
Msa0248570 AT3G51490.3 29.143 175 100 3 75 226 2 175 1.01e-18 90.5
Msa0248570 AT3G51490.3 37.500 96 60 0 432 527 569 664 6.18e-13 72.0
Msa0248570 AT1G54730.10 28.821 229 135 5 78 285 81 302 1.03e-18 87.8
Msa0248570 AT1G54730.6 28.821 229 135 5 78 285 81 302 1.03e-18 87.8
Msa0248570 AT1G54730.5 27.599 279 166 8 78 328 81 351 1.11e-18 89.4
Msa0248570 AT1G54730.5 31.933 119 80 1 412 530 324 441 1.42e-13 73.6
Msa0248570 AT5G27350.1 28.024 339 218 6 31 350 36 367 1.14e-18 89.4
Msa0248570 AT1G54730.8 27.599 279 166 8 78 328 81 351 1.38e-18 88.6
Msa0248570 AT3G05400.2 29.167 288 158 9 73 342 70 329 2.04e-18 88.6
Msa0248570 AT1G08920.1 28.571 273 157 8 78 326 81 339 2.81e-18 88.2
Msa0248570 AT1G08920.3 28.571 273 157 8 78 326 81 339 3.79e-18 87.8
Msa0248570 AT1G08920.2 28.253 269 155 8 78 322 81 335 7.93e-18 87.0
Msa0248570 AT5G27360.2 28.244 262 160 5 101 343 3 255 1.04e-16 82.4
Msa0248570 AT5G27360.2 32.353 102 68 1 435 536 267 367 5.22e-11 65.1
Msa0248570 AT5G27360.5 28.244 262 160 5 101 343 3 255 1.04e-16 82.4
Msa0248570 AT5G27360.5 32.353 102 68 1 435 536 267 367 5.22e-11 65.1
Msa0248570 AT1G77210.3 30.049 203 118 4 139 320 7 206 1.74e-16 81.6
Msa0248570 AT1G08890.1 28.114 281 170 5 78 337 76 345 1.85e-16 82.4
Msa0248570 AT1G08900.4 27.941 272 164 6 78 328 74 334 6.77e-16 80.5
Msa0248570 AT4G35300.5 40.625 96 57 0 432 527 428 523 6.97e-16 81.3
Msa0248570 AT1G08900.1 27.206 272 166 6 78 328 74 334 1.14e-15 80.1
Msa0248570 AT1G08900.1 32.353 102 68 1 434 535 360 460 8.61e-11 64.7
Msa0248570 AT1G08900.2 27.206 272 166 6 78 328 74 334 1.14e-15 80.1
Msa0248570 AT1G08900.2 32.353 102 68 1 434 535 360 460 8.61e-11 64.7
Msa0248570 AT1G08900.3 27.076 277 170 6 73 328 61 326 1.31e-15 79.7
Msa0248570 AT1G08900.3 32.353 102 68 1 434 535 352 452 8.97e-11 64.7
Msa0248570 AT1G08900.5 27.076 277 170 6 73 328 27 292 1.35e-15 79.7
Msa0248570 AT3G20460.1 25.085 295 184 8 78 346 102 385 2.67e-15 79.0
Msa0248570 AT4G04760.1 26.990 289 178 7 78 343 80 358 5.89e-15 77.8
Msa0248570 AT4G04760.1 32.203 118 74 3 416 533 356 467 5.10e-11 65.5
Msa0248570 AT4G04760.3 26.990 289 178 7 78 343 21 299 6.74e-15 77.4
Msa0248570 AT4G04760.3 32.203 118 74 3 416 533 297 408 4.23e-11 65.5
Msa0248570 AT4G04750.1 25.887 282 177 6 78 337 85 356 7.39e-15 77.8
Msa0248570 AT4G04750.1 34.000 100 65 1 432 531 371 469 7.00e-11 65.1
Msa0248570 AT4G04750.2 25.887 282 177 6 78 337 85 356 7.39e-15 77.8
Msa0248570 AT4G04750.2 34.000 100 65 1 432 531 371 469 7.00e-11 65.1
Msa0248570 AT4G04750.3 25.887 282 177 6 78 337 129 400 8.86e-15 77.4
Msa0248570 AT4G04750.3 34.000 100 65 1 432 531 415 513 4.64e-11 65.9
Msa0248570 AT1G79820.3 28.649 185 125 3 14 196 44 223 4.32e-13 72.0
Msa0248570 AT4G04760.2 32.500 120 75 3 414 533 351 464 9.38e-12 67.8
Msa0248570 AT4G04760.2 26.718 262 159 7 78 316 80 331 1.17e-11 67.4

Find 137 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGACATTGGTTATCTTT+TGG 0.215526 2_2:-32729519 Msa0248570:three_prime_UTR
GTTTCATAGCTTAAATTAAT+TGG 0.217938 2_2:-32729654 Msa0248570:three_prime_UTR
GCAATTGCTGGAGCAATTAT+TGG 0.236188 2_2:-32731643 Msa0248570:CDS
AGTATTAAATGATTTCTAAT+TGG 0.243935 2_2:-32729361 Msa0248570:three_prime_UTR
GGAATTGTATGAAGTGTATA+AGG 0.246709 2_2:-32730320 Msa0248570:CDS
CAGCTATGAACAATCATAAT+TGG 0.292908 2_2:-32730341 Msa0248570:CDS
TTGACTTTGACTGTGGCAAT+TGG 0.311315 2_2:-32729895 Msa0248570:CDS
CTTCTGTCACTAATCACTTC+TGG 0.342039 2_2:-32730573 Msa0248570:CDS
TTTAATAGGGTCAATTATCT+TGG 0.346819 2_2:-32731548 Msa0248570:CDS
TGCGTGTATGTTTGGATTAA+CGG 0.349020 2_2:-32729603 Msa0248570:three_prime_UTR
GGTAGAGTATTTGTTGGTCT+TGG 0.352669 2_2:-32731493 Msa0248570:CDS
ACCTCCTTCCATGCTGTTGT+TGG 0.357762 2_2:+32734953 None:intergenic
ATAGCTGCTGTCTTGAACTC+AGG 0.365217 2_2:+32730357 None:intergenic
CATGGAACTGTTCCCATTCC+AGG 0.373716 2_2:+32730021 None:intergenic
TTTGATTTGGTCAAATTTGT+TGG 0.375895 2_2:-32729554 Msa0248570:three_prime_UTR
TTCTCCCTCTGAGAAATAAT+TGG 0.381457 2_2:-32729716 Msa0248570:exon
GATTTGTGCAGATCAAGTTT+TGG 0.388591 2_2:-32729750 Msa0248570:CDS
ACAATGAGAGTAGCTGGATT+TGG 0.389582 2_2:+32731517 None:intergenic
CGTATGATTAGTTGGATTGC+TGG 0.392546 2_2:-32729452 Msa0248570:three_prime_UTR
CATGTCTTCCTTTCTACTGC+TGG 0.393342 2_2:+32734034 None:intergenic
TGGTGTGGGGATGGCTTCAA+TGG 0.393998 2_2:-32731473 Msa0248570:CDS
AGAAAGGAAGACATGGCTTC+AGG 0.394649 2_2:-32734026 Msa0248570:intron
AAAGCAGACATATCTGCTTC+TGG 0.397219 2_2:+32734927 None:intergenic
TTGATTTGGTCAAATTTGTT+GGG 0.403219 2_2:-32729553 Msa0248570:three_prime_UTR
ATTGTTGGTAGAGTATTTGT+TGG 0.405460 2_2:-32731499 Msa0248570:CDS
GAGAATGTTTATCTCTATCA+TGG 0.407356 2_2:-32734902 Msa0248570:CDS
ATCGGTTGAAATGGAGCTTA+AGG 0.409745 2_2:-32730769 Msa0248570:CDS
GTTGCGGTGTCACTTTGATT+TGG 0.410522 2_2:-32729567 Msa0248570:three_prime_UTR
ATATATTTCATTGACAAAAC+CGG 0.410815 2_2:-32730522 Msa0248570:CDS
AAATGGGTCGTATGATTAGT+TGG 0.412737 2_2:-32729460 Msa0248570:three_prime_UTR
ATACTTGCTGTGTTGTGTTT+CGG 0.413397 2_2:+32735086 None:intergenic
TGTTGGTCTTGGTGTGGGGA+TGG 0.416022 2_2:-32731482 Msa0248570:CDS
GGCACATGGAGGTGGATGTT+AGG 0.417581 2_2:-32731205 Msa0248570:CDS
GGATGGATCAATGATAGATT+TGG 0.419766 2_2:-32731607 Msa0248570:CDS
GCTTCGCCAACTAGAGTTAG+AGG 0.419914 2_2:-32731427 Msa0248570:CDS
CATATTCTTCTCACCTGGAA+TGG 0.431782 2_2:-32730034 Msa0248570:CDS
GCAATTATTGGAGCAGCAAT+TGG 0.438593 2_2:-32731631 Msa0248570:CDS
GTATGTGCAGGAGTTATATC+TGG 0.439009 2_2:-32734085 Msa0248570:intron
CCTTCCATTGTTCAGTTGGC+CGG 0.440677 2_2:-32730621 Msa0248570:CDS
AGCAATTGCTGTACTCACTA+TGG 0.443192 2_2:+32731657 None:intergenic
ACTTCTGGCCTCAATGCAAT+AGG 0.445200 2_2:-32730558 Msa0248570:CDS
CATCAACTTGGCCTTTACTA+AGG 0.446650 2_2:-32731347 Msa0248570:intron
AAAGGTTGTCCTAGCAACTT+TGG 0.448496 2_2:-32730090 Msa0248570:CDS
ATTGGAACCCCTTTAGTCTC+TGG 0.450446 2_2:+32729802 None:intergenic
GTTAGAAGAGGTTTATATGC+AGG 0.450905 2_2:-32730702 Msa0248570:CDS
AAAGGCCAAGTTGATGAGAT+AGG 0.452110 2_2:+32731354 None:intergenic
ATTGAAAGAATCGGTTGAAA+TGG 0.452372 2_2:-32730778 Msa0248570:CDS
CCTTTCCTATCTCATCAACT+TGG 0.453480 2_2:-32731359 Msa0248570:CDS
TGTTGATACCGACAAATTGT+TGG 0.456542 2_2:+32730661 None:intergenic
TGAAATTTGCAGACCAAGCC+AGG 0.459373 2_2:-32730180 Msa0248570:intron
AACATCCACCTCCATGTGCC+TGG 0.460125 2_2:+32731208 None:intergenic
ATCTATCCATTGAGGTATAG+AGG 0.460517 2_2:-32729982 Msa0248570:CDS
GTATTTGTTGGTCTTGGTGT+GGG 0.461874 2_2:-32731487 Msa0248570:CDS
ATGTCTTCCTTTCTACTGCT+GGG 0.469742 2_2:+32734035 None:intergenic
CTGTGGCAATTGGACCTGCT+TGG 0.472061 2_2:-32729885 Msa0248570:CDS
CAATGCAAGTTTCTTCCTCC+CGG 0.473299 2_2:+32730503 None:intergenic
AATCCAGCTACTCTCATTGT+TGG 0.476349 2_2:-32731514 Msa0248570:CDS
ATATTCTTCTCACCTGGAAT+GGG 0.477734 2_2:-32730033 Msa0248570:CDS
GATTCAAGCATTGAAAGAAT+CGG 0.481110 2_2:-32730787 Msa0248570:CDS
AAAGCAAGACGAAGAACATA+AGG 0.481359 2_2:+32734873 None:intergenic
CTACCAACAATGAGAGTAGC+TGG 0.485518 2_2:+32731511 None:intergenic
AGGGGTTCCAATGGAGGAAG+TGG 0.488028 2_2:-32729791 Msa0248570:CDS
GATTAAACATGCACCTGGCT+TGG 0.488753 2_2:+32730167 None:intergenic
AGGCACCAGGCACATGGAGG+TGG 0.488950 2_2:-32731213 Msa0248570:CDS
CATATTCCTCTATACCTCAA+TGG 0.493473 2_2:+32729976 None:intergenic
AGAGGTTTATATGCAGGTTG+TGG 0.493521 2_2:-32730696 Msa0248570:CDS
ATAGTGAGTACAGCAATTGC+TGG 0.496005 2_2:-32731655 Msa0248570:CDS
CGGTGAATTTGTCCGAGTTG+CGG 0.500173 2_2:-32729583 Msa0248570:three_prime_UTR
AACTCTAGTTGGCGAAGCCT+CGG 0.502911 2_2:+32731432 None:intergenic
TTGTGCTGCTCCTGGTGACA+TGG 0.507167 2_2:-32730274 Msa0248570:intron
ATGAATTCCCAGCAGTAGAA+AGG 0.509817 2_2:-32734042 Msa0248570:CDS
AGTTTCACACACCTTAGTAA+AGG 0.510939 2_2:+32731336 None:intergenic
CATAGAGCATGGTACACAAA+AGG 0.511414 2_2:-32730108 Msa0248570:CDS
CTGACCAATTATTTCTCAGA+GGG 0.515286 2_2:+32729712 None:intergenic
CTTGCATTGATTAGTTTGAC+CGG 0.517094 2_2:-32730489 Msa0248570:CDS
CACACCAACAACAGCATGGA+AGG 0.522819 2_2:-32734957 Msa0248570:exon
TCGCTCAGGCACCAGGCACA+TGG 0.524907 2_2:-32731219 Msa0248570:intron
CTGGAATGGGAACAGTTCCA+TGG 0.524999 2_2:-32730020 Msa0248570:CDS
CAGTCCTTCCATTGTTCAGT+TGG 0.529091 2_2:-32730625 Msa0248570:CDS
ATCCTTCTTGACTTTGACTG+TGG 0.529313 2_2:-32729902 Msa0248570:CDS
AGTATTTGTTGGTCTTGGTG+TGG 0.532520 2_2:-32731488 Msa0248570:CDS
AGAGCACCTCTAACTCTAGT+TGG 0.534348 2_2:+32731421 None:intergenic
ATACTCTCCACTTCCTCCAT+TGG 0.537148 2_2:+32729784 None:intergenic
AAAACAACATCTGTTAGAAG+AGG 0.541737 2_2:-32730714 Msa0248570:CDS
GTTGTCCTAGCAACTTTGGT+TGG 0.543320 2_2:-32730086 Msa0248570:CDS
ATTTCAGAGTTAACAACCCA+TGG 0.544878 2_2:+32730003 None:intergenic
TTCGCTTTCACGAAAAGTAA+CGG 0.545737 2_2:+32730440 None:intergenic
TGATTTCTCGCTCAGGCACC+AGG 0.546000 2_2:-32731226 Msa0248570:intron
ATTATTGGAGCAGCAATTGG+TGG 0.548778 2_2:-32731628 Msa0248570:CDS
ATTCTAAATATGCAAGACAT+TGG 0.551719 2_2:-32729530 Msa0248570:three_prime_UTR
TTGGAGCAGCAATTGGTGGA+TGG 0.555014 2_2:-32731624 Msa0248570:CDS
TATTTGTTGGTCTTGGTGTG+GGG 0.556126 2_2:-32731486 Msa0248570:CDS
AGAGACTAAAGGGGTTCCAA+TGG 0.566345 2_2:-32729800 Msa0248570:CDS
GAATTGTATGAAGTGTATAA+GGG 0.566500 2_2:-32730319 Msa0248570:CDS
TAGCTGCTGTCTTGAACTCA+GGG 0.566600 2_2:+32730358 None:intergenic
TGCCACAGTCAAAGTCAAGA+AGG 0.567232 2_2:+32729900 None:intergenic
TTCGAGATTAAACATGCACC+TGG 0.569618 2_2:+32730162 None:intergenic
TACATCATATTCTTCTCACC+TGG 0.570930 2_2:-32730039 Msa0248570:CDS
AGGGCTGAGTCCACTACTTG+TGG 0.575120 2_2:-32730300 Msa0248570:CDS
TATATTTCATTGACAAAACC+GGG 0.581152 2_2:-32730521 Msa0248570:CDS
CTGTAGAGGATTGTGAAATG+AGG 0.586256 2_2:-32729414 Msa0248570:three_prime_UTR
GACTAAAGGGGTTCCAATGG+AGG 0.587381 2_2:-32729797 Msa0248570:CDS
GCGATCCAACCAAAGTTGCT+AGG 0.590293 2_2:+32730081 None:intergenic
TGGAATGGGAACAGTTCCAT+GGG 0.592733 2_2:-32730019 Msa0248570:CDS
AGAATATGATGTAGAGTGCG+AGG 0.597439 2_2:+32730049 None:intergenic
CCGGCCAACTGAACAATGGA+AGG 0.599512 2_2:+32730621 None:intergenic
AAATTGAACCTATTGCATTG+AGG 0.600439 2_2:+32730550 None:intergenic
CTTTCGATGACACTAACCAT+TGG 0.601711 2_2:+32730408 None:intergenic
ATCAAAGTGACACCGCAACT+CGG 0.602637 2_2:+32729571 None:intergenic
CAGCAGTAGAAAGGAAGACA+TGG 0.606845 2_2:-32734033 Msa0248570:CDS
AGAACACACCAACAACAGCA+TGG 0.608073 2_2:-32734961 Msa0248570:exon
AACAATGTAACAGGGCAAAG+AGG 0.608199 2_2:-32730865 Msa0248570:intron
AATAGCATCAACAACGGTGT+GGG 0.610367 2_2:-32729947 Msa0248570:CDS
ACTCTGAAATCTATCCATTG+AGG 0.612345 2_2:-32729990 Msa0248570:CDS
AAGCGAAATTCATGCACCAA+TGG 0.615781 2_2:-32730424 Msa0248570:CDS
AAGAGATTTACCATGTCACC+AGG 0.619446 2_2:+32730264 None:intergenic
AGCACAAAATCCACAAGTAG+TGG 0.619823 2_2:+32730290 None:intergenic
AATCCTCATGAAATCTGTAG+AGG 0.620619 2_2:-32729428 Msa0248570:three_prime_UTR
AATATCATGAAAGTCCAAGC+AGG 0.622278 2_2:+32729871 None:intergenic
ATCTCCTTTGTATATCTCCG+AGG 0.630924 2_2:-32731449 Msa0248570:CDS
CCAAGTTGATGAGATAGGAA+AGG 0.636278 2_2:+32731359 None:intergenic
TCTGACCAATTATTTCTCAG+AGG 0.636844 2_2:+32729711 None:intergenic
GAATATGATGTAGAGTGCGA+GGG 0.637075 2_2:+32730050 None:intergenic
AGAAGGATTGTGAAACAACA+AGG 0.638416 2_2:+32729917 None:intergenic
AATCCTCTACAGATTTCATG+AGG 0.647807 2_2:+32729425 None:intergenic
GCGGCGTTGATCATAGAGCA+TGG 0.648819 2_2:-32730119 Msa0248570:CDS
GAATAGCATCAACAACGGTG+TGG 0.653838 2_2:-32729948 Msa0248570:CDS
CGGTTAAAAGAGTCAAAGAG+AGG 0.654748 2_2:+32730460 None:intergenic
GAAGCCTCGGAGATATACAA+AGG 0.655795 2_2:+32731445 None:intergenic
AGGTATAGAGGAATATGCGG+AGG 0.666557 2_2:-32729970 Msa0248570:CDS
CTCAGGCACCAGGCACATGG+AGG 0.675695 2_2:-32731216 Msa0248570:intron
ACCAACAACAGCATGGAAGG+AGG 0.679431 2_2:-32734954 Msa0248570:exon
AAAACCGGCCAACTGAACAA+TGG 0.684628 2_2:+32730617 None:intergenic
TTGAGGTATAGAGGAATATG+CGG 0.686287 2_2:-32729973 Msa0248570:CDS
AGTCAAAGAGAGGACAACAC+CGG 0.714867 2_2:+32730470 None:intergenic
CGGAGGAATAGCATCAACAA+CGG 0.719019 2_2:-32729953 Msa0248570:CDS
ATTTCATTGACAAAACCGGG+AGG 0.748225 2_2:-32730518 Msa0248570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGTATATATACTTTTTT+AGG - chr2_2:32730150-32730169 Msa0248570:CDS 10.0%
!!! TTTGTATATATACTTTTTTA+GGG - chr2_2:32730151-32730170 Msa0248570:CDS 10.0%
!! ATAATATAAAAAAATTGGAT+TGG - chr2_2:32730627-32730646 Msa0248570:CDS 10.0%
!! TAAGATCAAATTTAATATAT+CGG - chr2_2:32730880-32730899 Msa0248570:intron 10.0%
!! ACATAAAATATGAAAATTAA+TGG + chr2_2:32731302-32731321 None:intergenic 10.0%
!!! TATGTGATTTTATATTTATT+AGG - chr2_2:32731753-32731772 Msa0248570:intron 10.0%
!!! ATGTGATTTTATATTTATTA+GGG - chr2_2:32731754-32731773 Msa0248570:intron 10.0%
!!! ATTTTATTTTTTTAACATTC+CGG + chr2_2:32732688-32732707 None:intergenic 10.0%
!!! TACTGATTTTATGAAATATA+AGG + chr2_2:32730025-32730044 None:intergenic 15.0%
!!! TTGTATATATACTTTTTTAG+GGG - chr2_2:32730152-32730171 Msa0248570:CDS 15.0%
!! ATAATTAGATTAGATTTACA+TGG + chr2_2:32731116-32731135 None:intergenic 15.0%
!!! TGTGATTTTATATTTATTAG+GGG - chr2_2:32731755-32731774 Msa0248570:intron 15.0%
!! TAAAAAAAGAGTAAACTATT+TGG + chr2_2:32731945-32731964 None:intergenic 15.0%
!!! AGATTTAGTAAATTACTTTT+TGG + chr2_2:32732033-32732052 None:intergenic 15.0%
!! AAAGAGAATTATATTCTATA+TGG + chr2_2:32732499-32732518 None:intergenic 15.0%
!!! TTTTATTTTTTTAACATTCC+GGG + chr2_2:32732687-32732706 None:intergenic 15.0%
!! TGATAAAAAAAAAATGTAAC+AGG - chr2_2:32732759-32732778 Msa0248570:intron 15.0%
!! AGTATTAAATGATTTCTAAT+TGG - chr2_2:32735081-32735100 Msa0248570:five_prime_UTR 15.0%
!! AAAAAATTATGAAGAAACAG+AGG + chr2_2:32729658-32729677 None:intergenic 20.0%
!!! ATTCTTTTTAACTTCAATTG+TGG - chr2_2:32729790-32729809 Msa0248570:CDS 20.0%
!!! ATTATGTAAAGGTTGATAAA+TGG - chr2_2:32730331-32730350 Msa0248570:CDS 20.0%
!!! ATTTCAACCTTTTACTTTAA+TGG - chr2_2:32730505-32730524 Msa0248570:CDS 20.0%
!! TTAAAGTCCATTAAAGTAAA+AGG + chr2_2:32730515-32730534 None:intergenic 20.0%
!! GTTCAAAAAAAGACATTATT+AGG + chr2_2:32731422-32731441 None:intergenic 20.0%
!! TTCAGTGTAATTATATATGT+CGG + chr2_2:32731603-32731622 None:intergenic 20.0%
!! AGTTTGGAAAAATTAATGAT+AGG + chr2_2:32731783-32731802 None:intergenic 20.0%
!! TTGACTAATTTATAAGAGTT+TGG + chr2_2:32731799-32731818 None:intergenic 20.0%
!!! AACCATAAGTTTTCAAATAA+AGG - chr2_2:32731817-32731836 Msa0248570:intron 20.0%
!!! ATCCTTTATTTGAAAACTTA+TGG + chr2_2:32731822-32731841 None:intergenic 20.0%
!! TTTGATGAGATAAATTACTT+GGG + chr2_2:32731986-32732005 None:intergenic 20.0%
!!! TTTTGATGAGATAAATTACT+TGG + chr2_2:32731987-32732006 None:intergenic 20.0%
!!! CTTTTTAACAATTATGGAAA+CGG + chr2_2:32732423-32732442 None:intergenic 20.0%
!! AAAATATAATGCTTCTTTGT+TGG - chr2_2:32732588-32732607 Msa0248570:intron 20.0%
!! ACATATAAAAACGAAAAAAG+AGG + chr2_2:32733152-32733171 None:intergenic 20.0%
!!! CTTTTTTCGTTTTTATATGT+CGG - chr2_2:32733152-32733171 Msa0248570:intron 20.0%
!! ATTGGATGTAAAATAAAAGT+TGG - chr2_2:32733406-32733425 Msa0248570:intron 20.0%
!! ATATATTTCATTGACAAAAC+CGG - chr2_2:32733920-32733939 Msa0248570:intron 20.0%
!! TGATGTAAAAATATCACATT+GGG + chr2_2:32734205-32734224 None:intergenic 20.0%
!! ATGATGTAAAAATATCACAT+TGG + chr2_2:32734206-32734225 None:intergenic 20.0%
!! AAAAATACAGAAGATATTTG+CGG - chr2_2:32734304-32734323 Msa0248570:intron 20.0%
!! AAAAATGATGACAAAGAAAA+TGG + chr2_2:32734617-32734636 None:intergenic 20.0%
!! GTTTCATAGCTTAAATTAAT+TGG - chr2_2:32734788-32734807 Msa0248570:intron 20.0%
!!! AGTTAGCATTTTAATTCAAA+TGG - chr2_2:32734965-32734984 Msa0248570:five_prime_UTR 20.0%
!!! GTTAGCATTTTAATTCAAAT+GGG - chr2_2:32734966-32734985 Msa0248570:five_prime_UTR 20.0%
! TCATGCATTTAAACAATCAA+CGG - chr2_2:32729975-32729994 Msa0248570:CDS 25.0%
!!! AGATTTTAATGTTGAGTCAA+AGG - chr2_2:32730070-32730089 Msa0248570:CDS 25.0%
! AAGAAAAGCTATTATTTGAC+TGG - chr2_2:32730249-32730268 Msa0248570:intron 25.0%
!! GAAAAGGGATTTATTTGTTA+AGG + chr2_2:32730479-32730498 None:intergenic 25.0%
!!! TTGTTTTTTGTGAATCAAGT+TGG + chr2_2:32730568-32730587 None:intergenic 25.0%
! TTAGATTAGATTTACATGGT+TGG + chr2_2:32731112-32731131 None:intergenic 25.0%
! TATGAAAATTAATGGTTGAG+AGG + chr2_2:32731294-32731313 None:intergenic 25.0%
!!! TCAATGGTATTTTAGTTATG+TGG + chr2_2:32731375-32731394 None:intergenic 25.0%
! CAAAAAAAGACATTATTAGG+TGG + chr2_2:32731419-32731438 None:intergenic 25.0%
!! TTTTTGAACAAATGTTCGAT+TGG - chr2_2:32731433-32731452 Msa0248570:CDS 25.0%
! GTGTTTAATTCATAGATCAA+TGG + chr2_2:32731537-32731556 None:intergenic 25.0%
!! AATCACATAATTTGAAACGA+TGG + chr2_2:32731742-32731761 None:intergenic 25.0%
!!! GTTATTTCTAACCTAAAATG+AGG + chr2_2:32731871-32731890 None:intergenic 25.0%
!! ACTTTATTCCTTTTCATTTG+TGG + chr2_2:32732057-32732076 None:intergenic 25.0%
!! GAATAAAGTTTTCCTGAAAA+AGG - chr2_2:32732068-32732087 Msa0248570:intron 25.0%
! CGTTTCCATAATTGTTAAAA+AGG - chr2_2:32732421-32732440 Msa0248570:intron 25.0%
!! TGCATCCTTTTTAACAATTA+TGG + chr2_2:32732429-32732448 None:intergenic 25.0%
!!! TGTTTTCATTCTTTGAGAAA+AGG + chr2_2:32732556-32732575 None:intergenic 25.0%
! AATTGACCCTATTAAAAAGA+GGG + chr2_2:32732890-32732909 None:intergenic 25.0%
! TAATTGACCCTATTAAAAAG+AGG + chr2_2:32732891-32732910 None:intergenic 25.0%
! TTTAATAGGGTCAATTATCT+TGG - chr2_2:32732894-32732913 Msa0248570:intron 25.0%
! ATCTTCTTTAACAATGTAAC+AGG - chr2_2:32733568-32733587 Msa0248570:intron 25.0%
! TCTTCTTTAACAATGTAACA+GGG - chr2_2:32733569-32733588 Msa0248570:intron 25.0%
!! AATTCTGAAAAAGATATACG+AGG - chr2_2:32733613-32733632 Msa0248570:intron 25.0%
! TATATTTCATTGACAAAACC+GGG - chr2_2:32733921-32733940 Msa0248570:intron 25.0%
! GAATTGTATGAAGTGTATAA+GGG - chr2_2:32734123-32734142 Msa0248570:intron 25.0%
! GATGTAAAAATATCACATTG+GGG + chr2_2:32734204-32734223 None:intergenic 25.0%
!!! TTTGATTTGGTCAAATTTGT+TGG - chr2_2:32734888-32734907 Msa0248570:CDS 25.0%
!!! TTGATTTGGTCAAATTTGTT+GGG - chr2_2:32734889-32734908 Msa0248570:CDS 25.0%
! ATTCTAAATATGCAAGACAT+TGG - chr2_2:32734912-32734931 Msa0248570:CDS 25.0%
GAGAATGTTTATCTCTATCA+TGG - chr2_2:32729540-32729559 Msa0248570:three_prime_UTR 30.0%
AATTATGAAGAAACAGAGGA+GGG + chr2_2:32729654-32729673 None:intergenic 30.0%
AAATTATGAAGAAACAGAGG+AGG + chr2_2:32729655-32729674 None:intergenic 30.0%
!!! CTTTTTAACTTCAATTGTGG+CGG - chr2_2:32729793-32729812 Msa0248570:CDS 30.0%
AATGCATGAAATTGCGATAA+CGG + chr2_2:32729964-32729983 None:intergenic 30.0%
CATGCATTTAAACAATCAAC+GGG - chr2_2:32729976-32729995 Msa0248570:CDS 30.0%
GGTTGAAATTCACAAGAAAA+GGG + chr2_2:32730494-32730513 None:intergenic 30.0%
AGGTTGAAATTCACAAGAAA+AGG + chr2_2:32730495-32730514 None:intergenic 30.0%
!!! TTTTTTGTGAATCAAGTTGG+TGG + chr2_2:32730565-32730584 None:intergenic 30.0%
TTTCTATGTATCACAACACT+TGG - chr2_2:32730598-32730617 Msa0248570:CDS 30.0%
TTGATCTTATCCGTTAAATC+CGG + chr2_2:32730869-32730888 None:intergenic 30.0%
AGGTAAATTTGCCAATAGAA+GGG + chr2_2:32731059-32731078 None:intergenic 30.0%
TAGGTAAATTTGCCAATAGA+AGG + chr2_2:32731060-32731079 None:intergenic 30.0%
AAACTCTAAATTCATCGAGT+AGG + chr2_2:32731079-32731098 None:intergenic 30.0%
TACCATTGAAATTCTCTAAG+AGG - chr2_2:32731386-32731405 Msa0248570:CDS 30.0%
TCATAGATCAATGGAAATTG+TGG + chr2_2:32731528-32731547 None:intergenic 30.0%
GTAATTATATATGTCGGTGT+CGG + chr2_2:32731597-32731616 None:intergenic 30.0%
ATTTCTAACCTAAAATGAGG+TGG + chr2_2:32731868-32731887 None:intergenic 30.0%
TAAATCTGCCACAAATGAAA+AGG - chr2_2:32732046-32732065 Msa0248570:intron 30.0%
ACCAATTTGAATAGTTGAAC+CGG - chr2_2:32732295-32732314 Msa0248570:intron 30.0%
TAACTGAATTAGAGACTCTT+CGG + chr2_2:32732333-32732352 None:intergenic 30.0%
AATGTTTGAATGTTCAAGTC+CGG - chr2_2:32732359-32732378 Msa0248570:intron 30.0%
TCTAAGAAACATCTGAGTTA+TGG + chr2_2:32732392-32732411 None:intergenic 30.0%
AGGATGCAATCAAATCTATA+AGG - chr2_2:32732441-32732460 Msa0248570:intron 30.0%
! CAGATACCCTCTTTTTAATA+GGG - chr2_2:32732881-32732900 Msa0248570:intron 30.0%
! ATTGTTGGTAGAGTATTTGT+TGG - chr2_2:32732943-32732962 Msa0248570:intron 30.0%
ACATATTACAGTCGCATAAT+CGG - chr2_2:32733358-32733377 Msa0248570:intron 30.0%
ATTAAGTAAAGTCAGAACGT+GGG + chr2_2:32733388-32733407 None:intergenic 30.0%
AATTAAGTAAAGTCAGAACG+TGG + chr2_2:32733389-32733408 None:intergenic 30.0%
ACGTTCTGACTTTACTTAAT+TGG - chr2_2:32733388-32733407 Msa0248570:intron 30.0%
!! AAAAAAGTTGCGTTGATTGA+TGG + chr2_2:32733485-32733504 None:intergenic 30.0%
!! GATTCAAGCATTGAAAGAAT+CGG - chr2_2:32733655-32733674 Msa0248570:intron 30.0%
ATTGAAAGAATCGGTTGAAA+TGG - chr2_2:32733664-32733683 Msa0248570:intron 30.0%
AAAACAACATCTGTTAGAAG+AGG - chr2_2:32733728-32733747 Msa0248570:intron 30.0%
! GCATTTTTCCAACAATTTGT+CGG - chr2_2:32733773-32733792 Msa0248570:intron 30.0%
AAATTGAACCTATTGCATTG+AGG + chr2_2:32733895-32733914 None:intergenic 30.0%
CAGCTATGAACAATCATAAT+TGG - chr2_2:32734101-32734120 Msa0248570:intron 30.0%
GGAATTGTATGAAGTGTATA+AGG - chr2_2:32734122-32734141 Msa0248570:intron 30.0%
!! CAAGACATTGGTTATCTTTT+GGG - chr2_2:32734924-32734943 Msa0248570:CDS 30.0%
AAAGCAAGACGAAGAACATA+AGG + chr2_2:32729572-32729591 None:intergenic 35.0%
CAGTATCATAGCCAAAAAGA+AGG + chr2_2:32729613-32729632 None:intergenic 35.0%
!!! CTTCTTTTTGGCTATGATAC+TGG - chr2_2:32729611-32729630 Msa0248570:three_prime_UTR 35.0%
GTGTATGTTTAGTATGACGA+TGG + chr2_2:32729919-32729938 None:intergenic 35.0%
GTCCTCTTAGAGAATTTCAA+TGG + chr2_2:32731391-32731410 None:intergenic 35.0%
! AAATGTTCGATTGGTCCAAT+TGG - chr2_2:32731442-32731461 Msa0248570:CDS 35.0%
! AATGTTCGATTGGTCCAATT+GGG - chr2_2:32731443-32731462 Msa0248570:CDS 35.0%
! TTCAACTTTCCATTGGTTGT+TGG + chr2_2:32731503-32731522 None:intergenic 35.0%
! TGTGGTTTTCAACTTTCCAT+TGG + chr2_2:32731510-32731529 None:intergenic 35.0%
GAGTAACATCGATATACAGA+TGG + chr2_2:32731720-32731739 None:intergenic 35.0%
AAAATGAGGTGGTTTCTCAT+GGG + chr2_2:32731857-32731876 None:intergenic 35.0%
TAAAATGAGGTGGTTTCTCA+TGG + chr2_2:32731858-32731877 None:intergenic 35.0%
! ATGAGAAACCACCTCATTTT+AGG - chr2_2:32731857-32731876 Msa0248570:intron 35.0%
! GACACTGAAAATTTTGCAAG+TGG - chr2_2:32731894-32731913 Msa0248570:intron 35.0%
!! CAAGTGGTGTTGTAAATTCT+TGG - chr2_2:32731910-32731929 Msa0248570:intron 35.0%
! ATTACGTTACTGCCTTTTTC+AGG + chr2_2:32732083-32732102 None:intergenic 35.0%
AGGCAGTAACGTAATGATTT+AGG - chr2_2:32732088-32732107 Msa0248570:intron 35.0%
CCACAGAATCAATACAAAGA+TGG + chr2_2:32732173-32732192 None:intergenic 35.0%
!! CCATCTTTGTATTGATTCTG+TGG - chr2_2:32732170-32732189 Msa0248570:intron 35.0%
ATGTTTGAATGTTCAAGTCC+GGG - chr2_2:32732360-32732379 Msa0248570:intron 35.0%
AATGTGTACATCTCTTCCAA+CGG + chr2_2:32732649-32732668 None:intergenic 35.0%
GGATGGATCAATGATAGATT+TGG - chr2_2:32732835-32732854 Msa0248570:intron 35.0%
! GCAGATACCCTCTTTTTAAT+AGG - chr2_2:32732880-32732899 Msa0248570:intron 35.0%
AGTTTCACACACCTTAGTAA+AGG + chr2_2:32733109-32733128 None:intergenic 35.0%
ATGCGACTGTAATATGTCTA+AGG + chr2_2:32733355-32733374 None:intergenic 35.0%
GTTAGAAGAGGTTTATATGC+AGG - chr2_2:32733740-32733759 Msa0248570:intron 35.0%
TGTTGATACCGACAAATTGT+TGG + chr2_2:32733784-32733803 None:intergenic 35.0%
! TGTTCTTTTCGATGCAAAAC+CGG + chr2_2:32733843-32733862 None:intergenic 35.0%
!! CTTGCATTGATTAGTTTGAC+CGG - chr2_2:32733953-32733972 Msa0248570:intron 35.0%
TTCGCTTTCACGAAAAGTAA+CGG + chr2_2:32734005-32734024 None:intergenic 35.0%
TACATCATATTCTTCTCACC+TGG - chr2_2:32734403-32734422 Msa0248570:intron 35.0%
ATATTCTTCTCACCTGGAAT+GGG - chr2_2:32734409-32734428 Msa0248570:intron 35.0%
ATTTCAGAGTTAACAACCCA+TGG + chr2_2:32734442-32734461 None:intergenic 35.0%
!! ACTCTGAAATCTATCCATTG+AGG - chr2_2:32734452-32734471 Msa0248570:intron 35.0%
ATCTATCCATTGAGGTATAG+AGG - chr2_2:32734460-32734479 Msa0248570:intron 35.0%
CATATTCCTCTATACCTCAA+TGG + chr2_2:32734469-32734488 None:intergenic 35.0%
TTGAGGTATAGAGGAATATG+CGG - chr2_2:32734469-32734488 Msa0248570:intron 35.0%
AGAAGGATTGTGAAACAACA+AGG + chr2_2:32734528-32734547 None:intergenic 35.0%
AATATCATGAAAGTCCAAGC+AGG + chr2_2:32734574-32734593 None:intergenic 35.0%
! ATTTTTGTGCCAGAGACTAA+AGG - chr2_2:32734631-32734650 Msa0248570:intron 35.0%
! TTTTTGTGCCAGAGACTAAA+GGG - chr2_2:32734632-32734651 Msa0248570:intron 35.0%
! GATTTGTGCAGATCAAGTTT+TGG - chr2_2:32734692-32734711 Msa0248570:intron 35.0%
! TTCTCCCTCTGAGAAATAAT+TGG - chr2_2:32734726-32734745 Msa0248570:intron 35.0%
! CTGACCAATTATTTCTCAGA+GGG + chr2_2:32734733-32734752 None:intergenic 35.0%
! TCTGACCAATTATTTCTCAG+AGG + chr2_2:32734734-32734753 None:intergenic 35.0%
!!! GTTAGTTTTGCGTGTATGTT+TGG - chr2_2:32734831-32734850 Msa0248570:intron 35.0%
TGCGTGTATGTTTGGATTAA+CGG - chr2_2:32734839-32734858 Msa0248570:CDS 35.0%
!! GCAAGACATTGGTTATCTTT+TGG - chr2_2:32734923-32734942 Msa0248570:CDS 35.0%
AAATGGGTCGTATGATTAGT+TGG - chr2_2:32734982-32735001 Msa0248570:five_prime_UTR 35.0%
AATCCTCATGAAATCTGTAG+AGG - chr2_2:32735014-32735033 Msa0248570:five_prime_UTR 35.0%
AATCCTCTACAGATTTCATG+AGG + chr2_2:32735020-32735039 None:intergenic 35.0%
AAAGCAGACATATCTGCTTC+TGG + chr2_2:32729518-32729537 None:intergenic 40.0%
!!! CTTGCTTTTTCTGCTGGAAT+TGG - chr2_2:32729584-32729603 Msa0248570:three_prime_UTR 40.0%
CGTCAGAATTACGATGATTC+TGG - chr2_2:32729888-32729907 Msa0248570:CDS 40.0%
AATCTCAGTTGCATGCATTG+TGG + chr2_2:32730055-32730074 None:intergenic 40.0%
GATAAATGGTGAGTATGTGC+AGG - chr2_2:32730345-32730364 Msa0248570:CDS 40.0%
GTATGTGCAGGAGTTATATC+TGG - chr2_2:32730357-32730376 Msa0248570:CDS 40.0%
ATGAATTCCCAGCAGTAGAA+AGG - chr2_2:32730400-32730419 Msa0248570:CDS 40.0%
ATGTCTTCCTTTCTACTGCT+GGG + chr2_2:32730410-32730429 None:intergenic 40.0%
GTGAAGCAGAGAACATGTAA+GGG + chr2_2:32730540-32730559 None:intergenic 40.0%
TGTGAAGCAGAGAACATGTA+AGG + chr2_2:32730541-32730560 None:intergenic 40.0%
! GTTTTCTATGTAACCCGATC+CGG - chr2_2:32730847-32730866 Msa0248570:CDS 40.0%
TTATCCGTTAAATCCGGATC+GGG + chr2_2:32730863-32730882 None:intergenic 40.0%
CTTATCCGTTAAATCCGGAT+CGG + chr2_2:32730864-32730883 None:intergenic 40.0%
GCAAGTTGTATCCCTTCTAT+TGG - chr2_2:32731045-32731064 Msa0248570:intron 40.0%
! ATGTTCGATTGGTCCAATTG+GGG - chr2_2:32731444-32731463 Msa0248570:CDS 40.0%
! TGGAGATGGAGTATTATCGA+TGG + chr2_2:32731700-32731719 None:intergenic 40.0%
CATCGATATACAGATGGAGA+TGG + chr2_2:32731714-32731733 None:intergenic 40.0%
! GCCGGTTCAACTATTCAAAT+TGG + chr2_2:32732299-32732318 None:intergenic 40.0%
ATTAGAGACTCTTCGGTTCA+TGG + chr2_2:32732326-32732345 None:intergenic 40.0%
TCTGAGTTATGGTTCAAACC+CGG + chr2_2:32732381-32732400 None:intergenic 40.0%
ACCTTCATACAAATCTCCGT+TGG - chr2_2:32732630-32732649 Msa0248570:intron 40.0%
TCCAACGGAGATTTGTATGA+AGG + chr2_2:32732634-32732653 None:intergenic 40.0%
AGCAATTGCTGTACTCACTA+TGG + chr2_2:32732788-32732807 None:intergenic 40.0%
ATAGTGAGTACAGCAATTGC+TGG - chr2_2:32732787-32732806 Msa0248570:intron 40.0%
GCAATTGCTGGAGCAATTAT+TGG - chr2_2:32732799-32732818 Msa0248570:intron 40.0%
GCAATTATTGGAGCAGCAAT+TGG - chr2_2:32732811-32732830 Msa0248570:intron 40.0%
ATTATTGGAGCAGCAATTGG+TGG - chr2_2:32732814-32732833 Msa0248570:intron 40.0%
ACAATGAGAGTAGCTGGATT+TGG + chr2_2:32732928-32732947 None:intergenic 40.0%
AATCCAGCTACTCTCATTGT+TGG - chr2_2:32732928-32732947 Msa0248570:intron 40.0%
! GGTAGAGTATTTGTTGGTCT+TGG - chr2_2:32732949-32732968 Msa0248570:intron 40.0%
!! AGTATTTGTTGGTCTTGGTG+TGG - chr2_2:32732954-32732973 Msa0248570:intron 40.0%
!! GTATTTGTTGGTCTTGGTGT+GGG - chr2_2:32732955-32732974 Msa0248570:intron 40.0%
!! TATTTGTTGGTCTTGGTGTG+GGG - chr2_2:32732956-32732975 Msa0248570:intron 40.0%
ATCTCCTTTGTATATCTCCG+AGG - chr2_2:32732993-32733012 Msa0248570:intron 40.0%
! CTCAACAGTTTTCTCATCAC+TGG - chr2_2:32733051-32733070 Msa0248570:intron 40.0%
! AACAGTTTTCTCATCACTGG+TGG - chr2_2:32733054-32733073 Msa0248570:intron 40.0%
!! CCAAGTTGATGAGATAGGAA+AGG + chr2_2:32733086-32733105 None:intergenic 40.0%
CCTTTCCTATCTCATCAACT+TGG - chr2_2:32733083-32733102 Msa0248570:intron 40.0%
!! AAAGGCCAAGTTGATGAGAT+AGG + chr2_2:32733091-32733110 None:intergenic 40.0%
! CATCAACTTGGCCTTTACTA+AGG - chr2_2:32733095-32733114 Msa0248570:intron 40.0%
TTGAACATGATTTCTCGCTC+AGG - chr2_2:32733209-32733228 Msa0248570:intron 40.0%
AGCACAATTTGTATCACAGC+AGG + chr2_2:32733276-32733295 None:intergenic 40.0%
AGGATGTTGAACTAACCTTG+CGG + chr2_2:32733335-32733354 None:intergenic 40.0%
GTCGTCTGACATTGATCAAA+TGG - chr2_2:32733436-32733455 Msa0248570:intron 40.0%
! GTTGATTGATGGTCGGATTT+GGG + chr2_2:32733474-32733493 None:intergenic 40.0%
!! AAGTTGCGTTGATTGATGGT+CGG + chr2_2:32733481-32733500 None:intergenic 40.0%
AACAATGTAACAGGGCAAAG+AGG - chr2_2:32733577-32733596 Msa0248570:intron 40.0%
GAAAAAGATATACGAGGTCG+AGG - chr2_2:32733619-32733638 Msa0248570:intron 40.0%
ATCGGTTGAAATGGAGCTTA+AGG - chr2_2:32733673-32733692 Msa0248570:intron 40.0%
AGAGGTTTATATGCAGGTTG+TGG - chr2_2:32733746-32733765 Msa0248570:intron 40.0%
CTTCTGTCACTAATCACTTC+TGG - chr2_2:32733869-32733888 Msa0248570:intron 40.0%
ATTTCATTGACAAAACCGGG+AGG - chr2_2:32733924-32733943 Msa0248570:intron 40.0%
CGGTTAAAAGAGTCAAAGAG+AGG + chr2_2:32733985-32734004 None:intergenic 40.0%
AAGCGAAATTCATGCACCAA+TGG - chr2_2:32734018-32734037 Msa0248570:intron 40.0%
CTTTCGATGACACTAACCAT+TGG + chr2_2:32734037-32734056 None:intergenic 40.0%
AGCACAAAATCCACAAGTAG+TGG + chr2_2:32734155-32734174 None:intergenic 40.0%
AAGAGATTTACCATGTCACC+AGG + chr2_2:32734181-32734200 None:intergenic 40.0%
TTCGAGATTAAACATGCACC+TGG + chr2_2:32734283-32734302 None:intergenic 40.0%
CATAGAGCATGGTACACAAA+AGG - chr2_2:32734334-32734353 Msa0248570:intron 40.0%
GAATATGATGTAGAGTGCGA+GGG + chr2_2:32734395-32734414 None:intergenic 40.0%
AGAATATGATGTAGAGTGCG+AGG + chr2_2:32734396-32734415 None:intergenic 40.0%
CATATTCTTCTCACCTGGAA+TGG - chr2_2:32734408-32734427 Msa0248570:intron 40.0%
AATAGCATCAACAACGGTGT+GGG - chr2_2:32734495-32734514 Msa0248570:intron 40.0%
ATCCTTCTTGACTTTGACTG+TGG - chr2_2:32734540-32734559 Msa0248570:intron 40.0%
TTGACTTTGACTGTGGCAAT+TGG - chr2_2:32734547-32734566 Msa0248570:intron 40.0%
! TTTTGTGCCAGAGACTAAAG+GGG - chr2_2:32734633-32734652 Msa0248570:intron 40.0%
! CGTATGATTAGTTGGATTGC+TGG - chr2_2:32734990-32735009 Msa0248570:five_prime_UTR 40.0%
CTGTAGAGGATTGTGAAATG+AGG - chr2_2:32735028-32735047 Msa0248570:five_prime_UTR 40.0%
AGAACACACCAACAACAGCA+TGG - chr2_2:32729481-32729500 Msa0248570:three_prime_UTR 45.0%
!!! CTTCGTCTTGCTTTTTCTGC+TGG - chr2_2:32729578-32729597 Msa0248570:three_prime_UTR 45.0%
!! GCTTTTTCTGCTGGAATTGG+TGG - chr2_2:32729587-32729606 Msa0248570:three_prime_UTR 45.0%
!! GGAATTGGTGGCCTTCTTTT+TGG - chr2_2:32729599-32729618 Msa0248570:three_prime_UTR 45.0%
TATGAAGAAACAGAGGAGGG+TGG + chr2_2:32729651-32729670 None:intergenic 45.0%
TCGTAATTCTGACGTAGCGA+TGG + chr2_2:32729882-32729901 None:intergenic 45.0%
CATGTCTTCCTTTCTACTGC+TGG + chr2_2:32730411-32730430 None:intergenic 45.0%
CAGCAGTAGAAAGGAAGACA+TGG - chr2_2:32730409-32730428 Msa0248570:CDS 45.0%
AGAAAGGAAGACATGGCTTC+AGG - chr2_2:32730416-32730435 Msa0248570:CDS 45.0%
GTAACCCGATCCGGATTTAA+CGG - chr2_2:32730856-32730875 Msa0248570:intron 45.0%
! CCGGCTTTAACTGCTTTGTT+GGG + chr2_2:32731476-32731495 None:intergenic 45.0%
CCCAACAAAGCAGTTAAAGC+CGG - chr2_2:32731473-32731492 Msa0248570:CDS 45.0%
! TCCGGCTTTAACTGCTTTGT+TGG + chr2_2:32731477-32731496 None:intergenic 45.0%
! TCCATTGGTTGTTGGTGTTC+CGG + chr2_2:32731495-32731514 None:intergenic 45.0%
! GGTGGTTTCTCATGGGTTTT+TGG + chr2_2:32731850-32731869 None:intergenic 45.0%
CTACCAACAATGAGAGTAGC+TGG + chr2_2:32732934-32732953 None:intergenic 45.0%
GAAGCCTCGGAGATATACAA+AGG + chr2_2:32733000-32733019 None:intergenic 45.0%
! AGAGCACCTCTAACTCTAGT+TGG + chr2_2:32733024-32733043 None:intergenic 45.0%
! GTCGGATTTGGGTTTCTATC+TGG + chr2_2:32733463-32733482 None:intergenic 45.0%
! CGTTGATTGATGGTCGGATT+TGG + chr2_2:32733475-32733494 None:intergenic 45.0%
CAGTCCTTCCATTGTTCAGT+TGG - chr2_2:32733817-32733836 Msa0248570:intron 45.0%
AAAACCGGCCAACTGAACAA+TGG + chr2_2:32733828-32733847 None:intergenic 45.0%
ACTTCTGGCCTCAATGCAAT+AGG - chr2_2:32733884-32733903 Msa0248570:intron 45.0%
CAATGCAAGTTTCTTCCTCC+CGG + chr2_2:32733942-32733961 None:intergenic 45.0%
AGTCAAAGAGAGGACAACAC+CGG + chr2_2:32733975-32733994 None:intergenic 45.0%
TAGCTGCTGTCTTGAACTCA+GGG + chr2_2:32734087-32734106 None:intergenic 45.0%
ATAGCTGCTGTCTTGAACTC+AGG + chr2_2:32734088-32734107 None:intergenic 45.0%
TGAAATTTGCAGACCAAGCC+AGG - chr2_2:32734262-32734281 Msa0248570:intron 45.0%
GATTAAACATGCACCTGGCT+TGG + chr2_2:32734278-32734297 None:intergenic 45.0%
TGGAATGGGAACAGTTCCAT+GGG - chr2_2:32734423-32734442 Msa0248570:intron 45.0%
AGGTATAGAGGAATATGCGG+AGG - chr2_2:32734472-32734491 Msa0248570:intron 45.0%
CGGAGGAATAGCATCAACAA+CGG - chr2_2:32734489-32734508 Msa0248570:intron 45.0%
GAATAGCATCAACAACGGTG+TGG - chr2_2:32734494-32734513 Msa0248570:intron 45.0%
TGCCACAGTCAAAGTCAAGA+AGG + chr2_2:32734545-32734564 None:intergenic 45.0%
ATTGGAACCCCTTTAGTCTC+TGG + chr2_2:32734643-32734662 None:intergenic 45.0%
AGAGACTAAAGGGGTTCCAA+TGG - chr2_2:32734642-32734661 Msa0248570:intron 45.0%
ATACTCTCCACTTCCTCCAT+TGG + chr2_2:32734661-32734680 None:intergenic 45.0%
ATCAAAGTGACACCGCAACT+CGG + chr2_2:32734874-32734893 None:intergenic 45.0%
!! GTTGCGGTGTCACTTTGATT+TGG - chr2_2:32734875-32734894 Msa0248570:CDS 45.0%
!!! TATCATTTTTATATTTTTAA+AGG - chr2_2:32730175-32730194 Msa0248570:intron 5.0%
!! TTATTTATATTATTATGTAA+AGG - chr2_2:32730320-32730339 Msa0248570:CDS 5.0%
!! CTTAAATAATATAAAAAAAT+TGG - chr2_2:32730622-32730641 Msa0248570:CDS 5.0%
CACACCAACAACAGCATGGA+AGG - chr2_2:32729485-32729504 Msa0248570:three_prime_UTR 50.0%
ACCAACAACAGCATGGAAGG+AGG - chr2_2:32729488-32729507 Msa0248570:three_prime_UTR 50.0%
ACCTCCTTCCATGCTGTTGT+TGG + chr2_2:32729492-32729511 None:intergenic 50.0%
GCAGAGCAAGCACATGTATC+TGG - chr2_2:32731347-32731366 Msa0248570:intron 50.0%
! TCGATTGGTCCAATTGGGGA+TGG - chr2_2:32731448-32731467 Msa0248570:CDS 50.0%
TGTTGGGTACCATCCCCAAT+TGG + chr2_2:32731460-32731479 None:intergenic 50.0%
TGTTAGTGTCGTGTCGTGTC+TGG - chr2_2:32731649-32731668 Msa0248570:CDS 50.0%
TCTTCGGTTCATGGTTCAGC+CGG + chr2_2:32732317-32732336 None:intergenic 50.0%
ATTTACTGCCAGACGATGCC+CGG - chr2_2:32732666-32732685 Msa0248570:intron 50.0%
! TTAACATTCCGGGCATCGTC+TGG + chr2_2:32732677-32732696 None:intergenic 50.0%
TTGGAGCAGCAATTGGTGGA+TGG - chr2_2:32732818-32732837 Msa0248570:intron 50.0%
AACTCTAGTTGGCGAAGCCT+CGG + chr2_2:32733013-32733032 None:intergenic 50.0%
GCTTCGCCAACTAGAGTTAG+AGG - chr2_2:32733015-32733034 Msa0248570:intron 50.0%
TACAACCAACGAGGTGACTC+GGG + chr2_2:32733312-32733331 None:intergenic 50.0%
GTACAACCAACGAGGTGACT+CGG + chr2_2:32733313-32733332 None:intergenic 50.0%
CCTTCCATTGTTCAGTTGGC+CGG - chr2_2:32733821-32733840 Msa0248570:intron 50.0%
!! TGTGGATTTTGTGCTGCTCC+TGG - chr2_2:32734160-32734179 Msa0248570:intron 50.0%
GCGATCCAACCAAAGTTGCT+AGG + chr2_2:32734364-32734383 None:intergenic 50.0%
CATGGAACTGTTCCCATTCC+AGG + chr2_2:32734424-32734443 None:intergenic 50.0%
CTGGAATGGGAACAGTTCCA+TGG - chr2_2:32734422-32734441 Msa0248570:intron 50.0%
GACTAAAGGGGTTCCAATGG+AGG - chr2_2:32734645-32734664 Msa0248570:intron 50.0%
CGGTGAATTTGTCCGAGTTG+CGG - chr2_2:32734859-32734878 Msa0248570:CDS 50.0%
GCCGGAACACCAACAACCAA+TGG - chr2_2:32731491-32731510 Msa0248570:CDS 55.0%
!! TCGGTGTCGGACACGACAAA+GGG + chr2_2:32731584-32731603 None:intergenic 55.0%
!! TGTTGGTCTTGGTGTGGGGA+TGG - chr2_2:32732960-32732979 Msa0248570:intron 55.0%
TGGTGTGGGGATGGCTTCAA+TGG - chr2_2:32732969-32732988 Msa0248570:intron 55.0%
TGATTTCTCGCTCAGGCACC+AGG - chr2_2:32733216-32733235 Msa0248570:intron 55.0%
AACATCCACCTCCATGTGCC+TGG + chr2_2:32733237-32733256 None:intergenic 55.0%
GGCACATGGAGGTGGATGTT+AGG - chr2_2:32733237-32733256 Msa0248570:intron 55.0%
! ACCTCGTTGGTTGTACCGCA+AGG - chr2_2:32733317-32733336 Msa0248570:intron 55.0%
ACCTTGCGGTACAACCAACG+AGG + chr2_2:32733321-32733340 None:intergenic 55.0%
CCGGCCAACTGAACAATGGA+AGG + chr2_2:32733824-32733843 None:intergenic 55.0%
AGGGCTGAGTCCACTACTTG+TGG - chr2_2:32734142-32734161 Msa0248570:intron 55.0%
! TTGTGCTGCTCCTGGTGACA+TGG - chr2_2:32734168-32734187 Msa0248570:intron 55.0%
!! GCGGCGTTGATCATAGAGCA+TGG - chr2_2:32734323-32734342 Msa0248570:intron 55.0%
CTGTGGCAATTGGACCTGCT+TGG - chr2_2:32734557-32734576 Msa0248570:intron 55.0%
AGGGGTTCCAATGGAGGAAG+TGG - chr2_2:32734651-32734670 Msa0248570:intron 55.0%
!! GTCGGTGTCGGACACGACAA+AGG + chr2_2:32731585-32731604 None:intergenic 60.0%
CACTTCCCGAGTCACCTCGT+TGG - chr2_2:32733304-32733323 Msa0248570:intron 60.0%
TCGCTCAGGCACCAGGCACA+TGG - chr2_2:32733223-32733242 Msa0248570:intron 65.0%
CTCAGGCACCAGGCACATGG+AGG - chr2_2:32733226-32733245 Msa0248570:intron 65.0%
AGGCACCAGGCACATGGAGG+TGG - chr2_2:32733229-32733248 Msa0248570:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 32729358 32735106 32729358 ID=Msa0248570;Name=Msa0248570
chr2_2 mRNA 32729358 32735106 32729358 ID=Msa0248570-mRNA-1;Parent=Msa0248570;Name=Msa0248570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=142|0.8|0.83|1|1|1|6|362|552
chr2_2 exon 32729358 32730190 32729358 ID=Msa0248570-mRNA-1:exon:11157;Parent=Msa0248570-mRNA-1
chr2_2 exon 32730275 32730874 32730275 ID=Msa0248570-mRNA-1:exon:11156;Parent=Msa0248570-mRNA-1
chr2_2 exon 32731186 32731233 32731186 ID=Msa0248570-mRNA-1:exon:11155;Parent=Msa0248570-mRNA-1
chr2_2 exon 32731348 32731683 32731348 ID=Msa0248570-mRNA-1:exon:11154;Parent=Msa0248570-mRNA-1
chr2_2 exon 32734027 32734097 32734027 ID=Msa0248570-mRNA-1:exon:11153;Parent=Msa0248570-mRNA-1
chr2_2 exon 32734832 32735106 32734832 ID=Msa0248570-mRNA-1:exon:11152;Parent=Msa0248570-mRNA-1
chr2_2 five_prime_UTR 32734965 32735106 32734965 ID=Msa0248570-mRNA-1:five_prime_utr;Parent=Msa0248570-mRNA-1
chr2_2 CDS 32734832 32734964 32734832 ID=Msa0248570-mRNA-1:cds;Parent=Msa0248570-mRNA-1
chr2_2 CDS 32734027 32734097 32734027 ID=Msa0248570-mRNA-1:cds;Parent=Msa0248570-mRNA-1
chr2_2 CDS 32731348 32731683 32731348 ID=Msa0248570-mRNA-1:cds;Parent=Msa0248570-mRNA-1
chr2_2 CDS 32731186 32731233 32731186 ID=Msa0248570-mRNA-1:cds;Parent=Msa0248570-mRNA-1
chr2_2 CDS 32730275 32730874 32730275 ID=Msa0248570-mRNA-1:cds;Parent=Msa0248570-mRNA-1
chr2_2 CDS 32729720 32730190 32729720 ID=Msa0248570-mRNA-1:cds;Parent=Msa0248570-mRNA-1
chr2_2 three_prime_UTR 32729358 32729719 32729358 ID=Msa0248570-mRNA-1:three_prime_utr;Parent=Msa0248570-mRNA-1
Gene Sequence

>Msa0248570

ATGGAAGGAGGTGTACCAGAAGCAGATATGTCTGCTTTCAGAGAATGTTTATCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTTTCTGCTGGAATTGGTGGCCTTCTTTTTGGCTATGATACTGGAGTTATATCTGGAGCTCTTTTGTATATAAGAGATGAATTCCCAGCAGTAGAAAGGAAGACATGGCTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATTATTGGAGCAGCAATTGGTGGATGGATCAATGATAGATTTGGAAGAAAAGTATCAATAATTGTTGCAGATACCCTCTTTTTAATAGGGTCAATTATCTTGGCTGCTGCTCCAAATCCAGCTACTCTCATTGTTGGTAGAGTATTTGTTGGTCTTGGTGTGGGGATGGCTTCAATGGCATCTCCTTTGTATATCTCCGAGGCTTCGCCAACTAGAGTTAGAGGTGCTCTTGTTAGTCTCAACAGTTTTCTCATCACTGGTGGACAGTTCCTTTCCTATCTCATCAACTTGGCCTTTACTAAGGCACCAGGCACATGGAGGTGGATGTTAGGAGTTGCAGCAGCACCTGCTGGCAAAGAGGAAGAAGCAAAAGTAATTCTGAAAAAGATATACGAGGTCGAGGACTATGACAATGAGATTCAAGCATTGAAAGAATCGGTTGAAATGGAGCTTAAGGAAACAGAAAAAATCAGCATAATGCAGCTTCTAAAAACAACATCTGTTAGAAGAGGTTTATATGCAGGTTGTGGACTTGCATTTTTCCAACAATTTGTCGGTATCAACACTGTGATGTACTACAGTCCTTCCATTGTTCAGTTGGCCGGTTTTGCATCGAAAAGAACAGCACTTCTTCTGTCACTAATCACTTCTGGCCTCAATGCAATAGGTTCAATTTTGAGCATATATTTCATTGACAAAACCGGGAGGAAGAAACTTGCATTGATTAGTTTGACCGGTGTTGTCCTCTCTTTGACTCTTTTAACCGTTACTTTTCGTGAAAGCGAAATTCATGCACCAATGGTTAGTGTCATCGAAAGCTCTCATTTCAATAACACTAACACATGCCCTGAGTTCAAGACAGCAGCTATGAACAATCATAATTGGAATTGTATGAAGTGTATAAGGGCTGAGTCCACTACTTGTGGATTTTGTGCTGCTCCTGGTGACATGACCAAGCCAGGTGCATGTTTAATCTCGAATAAAAATACAGAAGATATTTGCGGCGTTGATCATAGAGCATGGTACACAAAAGGTTGTCCTAGCAACTTTGGTTGGATCGCTATAATAGCCCTCGCACTCTACATCATATTCTTCTCACCTGGAATGGGAACAGTTCCATGGGTTGTTAACTCTGAAATCTATCCATTGAGGTATAGAGGAATATGCGGAGGAATAGCATCAACAACGGTGTGGGTTTCTAACCTTGTTGTTTCACAATCCTTCTTGACTTTGACTGTGGCAATTGGACCTGCTTGGACTTTCATGATATTTGCAATCATTGCTATTGTTGCCATTTTCTTTGTCATCATTTTTGTGCCAGAGACTAAAGGGGTTCCAATGGAGGAAGTGGAGAGTATGCTTGAAAAGAGATTTGTGCAGATCAAGTTTTGGAAGAAGAGAGATTCTCCCTCTGAGAAATAA
Protein sequence

>Msa0248570

MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFPAVERKTWLQEAIVSTAIAGAIIGAAIGGWINDRFGRKVSIIVADTLFLIGSIILAAAPNPATLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAAPAGKEEEAKVILKKIYEVEDYDNEIQALKESVEMELKETEKISIMQLLKTTSVRRGLYAGCGLAFFQQFVGINTVMYYSPSIVQLAGFASKRTALLLSLITSGLNAIGSILSIYFIDKTGRKKLALISLTGVVLSLTLLTVTFRESEIHAPMVSVIESSHFNNTNTCPEFKTAAMNNHNWNCMKCIRAESTTCGFCAAPGDMTKPGACLISNKNTEDICGVDHRAWYTKGCPSNFGWIAIIALALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTTVWVSNLVVSQSFLTLTVAIGPAWTFMIFAIIAIVAIFFVIIFVPETKGVPMEEVESMLEKRFVQIKFWKKRDSPSEK*