AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0325480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325480 MtrunA17_Chr2g0303701 97.378 572 12 2 1 572 1 569 0.0 1129
Msa0325480 MtrunA17_Chr2g0303731 74.826 576 136 6 1 572 1 571 0.0 884
Msa0325480 MtrunA17_Chr8g0376631 74.913 574 137 4 1 571 1 570 0.0 845
Msa0325480 MtrunA17_Chr8g0376601 71.350 548 149 5 1 545 1 543 0.0 776
Msa0325480 MtrunA17_Chr8g0376611 74.200 500 120 4 70 566 3 496 0.0 747
Msa0325480 MtrunA17_Chr2g0290181 58.201 567 227 4 2 562 3 565 0.0 649
Msa0325480 MtrunA17_Chr2g0290161 50.996 502 210 6 67 562 1 472 8.01e-162 470
Msa0325480 MtrunA17_Chr7g0214451 56.338 355 147 1 6 360 21 367 3.14e-131 392
Msa0325480 MtrunA17_Chr7g0214451 56.667 120 50 1 439 556 363 482 2.50e-38 147
Msa0325480 MtrunA17_Chr1g0213611 57.386 352 142 1 6 357 66 409 1.04e-129 390
Msa0325480 MtrunA17_Chr1g0213611 56.481 108 47 0 449 556 424 531 5.26e-36 141
Msa0325480 MtrunA17_Chr5g0434261 53.740 361 108 7 188 545 1 305 1.63e-123 366
Msa0325480 MtrunA17_Chr1g0213631 55.911 313 138 0 45 357 4 316 4.01e-112 342
Msa0325480 MtrunA17_Chr1g0213631 55.172 116 51 1 442 556 320 435 7.26e-36 140
Msa0325480 MtrunA17_Chr5g0434251 71.622 148 42 0 419 566 5 152 6.54e-78 243
Msa0325480 MtrunA17_Chr6g0450271 67.857 196 54 4 223 415 32 221 1.37e-74 238
Msa0325480 MtrunA17_Chr5g0434231 68.208 173 31 1 70 242 6 154 9.60e-73 229
Msa0325480 MtrunA17_Chr6g0450291 68.421 171 45 4 248 415 1 165 9.71e-64 207
Msa0325480 MtrunA17_Chr6g0450281 68.421 171 45 4 248 415 1 165 2.33e-63 206
Msa0325480 MtrunA17_Chr6g0450241 67.836 171 46 4 248 415 1 165 8.49e-63 204
Msa0325480 MtrunA17_Chr2g0282031 36.747 332 201 3 25 350 52 380 1.44e-57 201
Msa0325480 MtrunA17_Chr2g0282031 40.385 104 62 0 452 555 399 502 6.69e-15 77.4
Msa0325480 MtrunA17_Chr7g0250881 36.923 325 198 3 33 357 72 389 8.10e-56 196
Msa0325480 MtrunA17_Chr4g0036021 33.051 354 213 6 22 357 23 370 6.98e-55 194
Msa0325480 MtrunA17_Chr4g0036021 38.596 114 64 1 452 565 386 493 3.01e-12 69.3
Msa0325480 MtrunA17_Chr6g0457781 36.923 325 198 3 33 357 112 429 1.02e-54 194
Msa0325480 MtrunA17_Chr6g0485661 33.994 353 221 5 7 350 37 386 1.48e-51 184
Msa0325480 MtrunA17_Chr4g0034681 33.426 359 206 8 22 357 26 374 8.03e-51 182
Msa0325480 MtrunA17_Chr4g0034681 33.929 112 68 1 460 571 398 503 5.86e-11 65.1
Msa0325480 MtrunA17_Chr3g0121674 49.701 167 84 0 188 354 1 167 1.80e-50 176
Msa0325480 MtrunA17_Chr3g0121674 53.982 113 50 1 446 556 177 289 9.64e-37 139
Msa0325480 MtrunA17_Chr3g0144361 32.597 362 215 6 20 357 18 374 4.89e-50 180
Msa0325480 MtrunA17_Chr5g0432581 34.903 361 211 8 23 364 16 371 2.35e-49 178
Msa0325480 MtrunA17_Chr5g0432581 37.383 107 63 2 452 556 381 485 8.08e-13 70.9
Msa0325480 MtrunA17_Chr5g0394341 34.513 339 194 7 24 340 20 352 4.90e-49 177
Msa0325480 MtrunA17_Chr8g0373531 34.783 345 202 7 23 348 16 356 5.47e-48 174
Msa0325480 MtrunA17_Chr8g0373531 37.143 105 66 0 452 556 381 485 3.80e-14 75.1
Msa0325480 MtrunA17_Chr1g0164871 33.433 335 201 6 24 340 21 351 6.40e-48 174
Msa0325480 MtrunA17_Chr5g0437021 33.134 335 202 5 24 340 21 351 8.43e-48 174
Msa0325480 MtrunA17_Chr1g0164851 33.333 336 202 6 23 340 20 351 8.97e-48 174
Msa0325480 MtrunA17_Chr4g0021771 34.286 350 218 6 25 367 54 398 1.01e-47 174
Msa0325480 MtrunA17_Chr4g0021771 39.815 108 60 1 454 556 398 505 5.81e-15 77.8
Msa0325480 MtrunA17_Chr8g0390141 33.724 341 202 7 21 340 18 355 4.56e-47 172
Msa0325480 MtrunA17_Chr5g0434241 80.198 101 17 1 248 345 1 101 8.47e-47 159
Msa0325480 MtrunA17_Chr8g0390521 34.024 338 209 5 23 350 15 348 2.72e-46 170
Msa0325480 MtrunA17_Chr1g0205671 31.965 341 201 8 23 340 20 352 6.17e-46 169
Msa0325480 MtrunA17_Chr4g0048411 33.828 337 198 6 24 340 21 352 8.28e-46 169
Msa0325480 MtrunA17_Chr4g0032021 33.148 359 215 8 20 358 92 445 1.05e-45 169
Msa0325480 MtrunA17_Chr4g0032021 39.423 104 63 0 452 555 453 556 1.77e-14 76.3
Msa0325480 MtrunA17_Chr4g0048051 34.320 338 195 7 24 340 21 352 1.07e-45 168
Msa0325480 MtrunA17_Chr1g0205681 33.133 332 190 8 33 340 30 353 5.96e-45 166
Msa0325480 MtrunA17_Chr4g0065311 32.865 356 211 9 1 338 1 346 1.34e-44 165
Msa0325480 MtrunA17_Chr4g0039651 32.836 335 205 7 36 353 55 386 1.50e-44 165
Msa0325480 MtrunA17_Chr4g0039651 34.286 105 69 0 447 551 394 498 1.67e-11 66.6
Msa0325480 MtrunA17_Chr5g0417611 31.548 336 206 7 23 338 20 351 3.93e-43 161
Msa0325480 MtrunA17_Chr1g0205691 33.140 344 204 8 33 355 29 367 5.73e-43 161
Msa0325480 MtrunA17_Chr5g0445601 32.132 333 205 7 23 338 24 352 4.41e-42 158
Msa0325480 MtrunA17_Chr7g0257631 32.326 331 203 6 25 338 60 386 1.97e-41 157
Msa0325480 MtrunA17_Chr5g0420841 31.487 343 211 7 33 355 28 366 2.86e-41 156
Msa0325480 MtrunA17_Chr8g0390261 32.515 326 195 8 35 340 35 355 7.00e-41 155
Msa0325480 MtrunA17_Chr4g0065324 32.817 323 196 7 33 338 36 354 1.01e-39 151
Msa0325480 MtrunA17_Chr3g0085971 32.024 331 195 7 33 340 28 351 3.03e-39 150
Msa0325480 MtrunA17_Chr6g0486681 31.737 334 207 7 35 350 35 365 5.38e-39 149
Msa0325480 MtrunA17_Chr6g0486671 31.737 334 207 7 35 350 35 365 5.38e-39 149
Msa0325480 MtrunA17_Chr3g0128081 31.343 335 206 7 26 340 22 352 5.48e-39 149
Msa0325480 MtrunA17_Chr5g0403831 30.362 359 226 5 16 355 21 374 8.09e-39 149
Msa0325480 MtrunA17_Chr3g0119401 30.931 333 215 5 24 353 95 415 1.52e-37 145
Msa0325480 MtrunA17_Chr3g0115721 30.194 361 224 9 37 379 34 384 1.60e-36 142
Msa0325480 MtrunA17_Chr3g0115711 30.368 326 198 6 37 341 34 351 1.73e-36 142
Msa0325480 MtrunA17_Chr6g0486021 31.085 341 221 6 14 352 40 368 1.80e-36 142
Msa0325480 MtrunA17_Chr5g0407441 35.426 223 141 3 26 246 4 225 4.54e-36 143
Msa0325480 MtrunA17_Chr5g0407441 35.417 96 62 0 452 547 608 703 5.42e-11 65.5
Msa0325480 MtrunA17_Chr3g0144261 35.455 220 137 3 29 246 7 223 1.97e-35 141
Msa0325480 MtrunA17_Chr3g0144261 35.417 96 62 0 452 547 616 711 7.36e-14 74.7
Msa0325480 MtrunA17_Chr3g0115741 28.446 341 214 8 37 356 37 368 2.69e-35 139
Msa0325480 MtrunA17_Chr1g0155221 33.096 281 177 5 78 357 98 368 4.62e-35 138
Msa0325480 MtrunA17_Chr1g0155221 30.645 124 74 3 438 554 371 489 2.04e-11 66.6
Msa0325480 MtrunA17_Chr8g0376621 86.765 68 9 0 1 68 1 68 5.03e-35 126
Msa0325480 MtrunA17_Chr3g0128171 32.090 268 176 4 73 338 40 303 6.88e-35 137
Msa0325480 MtrunA17_Chr3g0115751 30.341 323 205 6 33 338 35 354 2.55e-34 136
Msa0325480 MtrunA17_Chr3g0078991 29.882 338 212 7 25 341 22 355 2.61e-34 136
Msa0325480 MtrunA17_Chr7g0273281 29.655 290 186 6 78 363 111 386 5.35e-34 135
Msa0325480 MtrunA17_Chr7g0273281 32.381 105 70 1 452 556 395 498 2.70e-11 66.2
Msa0325480 MtrunA17_Chr5g0434221 85.294 68 10 0 1 68 1 68 5.56e-34 123
Msa0325480 MtrunA17_Chr3g0115781 31.065 338 209 8 37 356 36 367 9.11e-34 134
Msa0325480 MtrunA17_Chr3g0146061 37.850 214 128 4 36 246 14 225 1.13e-33 136
Msa0325480 MtrunA17_Chr3g0146061 35.417 96 62 0 452 547 626 721 1.84e-13 73.6
Msa0325480 MtrunA17_Chr3g0078971 31.268 339 203 9 23 338 20 351 4.69e-33 132
Msa0325480 MtrunA17_Chr4g0004821 29.464 336 227 5 21 356 33 358 7.67e-33 131
Msa0325480 MtrunA17_Chr2g0286721 30.851 282 182 6 78 357 98 368 8.60e-33 131
Msa0325480 MtrunA17_Chr2g0286721 30.189 159 106 3 399 554 328 484 6.87e-12 67.8
Msa0325480 MtrunA17_Chr8g0370141 33.333 225 145 4 26 247 4 226 1.61e-32 129
Msa0325480 MtrunA17_Chr7g0259471 30.088 339 215 7 24 357 37 358 1.63e-32 130
Msa0325480 MtrunA17_Chr7g0259471 37.383 107 58 2 452 554 373 474 4.82e-13 71.6
Msa0325480 MtrunA17_Chr8g0373181 32.180 289 169 6 78 357 96 366 7.01e-32 129
Msa0325480 MtrunA17_Chr8g0373181 35.238 105 65 2 447 550 380 482 9.04e-12 67.8
Msa0325480 MtrunA17_Chr7g0259221 30.282 284 180 5 78 357 91 360 1.68e-30 124
Msa0325480 MtrunA17_Chr7g0259221 35.922 103 65 1 452 554 375 476 1.02e-12 70.5
Msa0325480 MtrunA17_Chr4g0066581 28.470 281 190 5 78 357 101 371 2.85e-30 124
Msa0325480 MtrunA17_Chr4g0066581 36.893 103 64 1 452 554 386 487 1.10e-12 70.5
Msa0325480 MtrunA17_Chr5g0419321 35.176 199 126 3 48 244 54 251 2.42e-29 123
Msa0325480 MtrunA17_Chr3g0078791 30.800 250 147 4 93 340 52 277 1.34e-26 112
Msa0325480 MtrunA17_Chr8g0373191 31.164 292 158 8 73 357 83 338 3.05e-26 112
Msa0325480 MtrunA17_Chr3g0115731 28.108 370 199 13 37 379 34 363 3.36e-23 103
Msa0325480 MtrunA17_Chr5g0404191 34.659 176 109 2 73 247 94 264 1.33e-21 95.5
Msa0325480 MtrunA17_Chr2g0290171 62.687 67 22 1 2 68 3 66 1.62e-20 85.9
Msa0325480 MtrunA17_Chr4g0065351 29.688 192 130 4 148 338 2 189 3.99e-18 86.3
Msa0325480 MtrunA17_Chr7g0273271 32.353 136 87 2 78 213 76 206 2.35e-16 78.2
Msa0325480 MtrunA17_Chr7g0273261 35.338 133 84 2 423 554 107 238 2.67e-14 73.2
Msa0325480 MtrunA17_Chr5g0404181 35.238 105 65 2 447 550 26 128 7.18e-14 68.9
Msa0325480 MtrunA17_Chr4g0065341 33.333 129 70 3 25 137 26 154 1.01e-11 63.9
Msa0325480 MtrunA17_Chr8g0370151 33.333 120 70 1 452 571 247 356 1.12e-11 66.6
Msa0325480 MtrunA17_Chr2g0319001 25.862 290 171 11 77 340 132 403 1.47e-11 67.0
Msa0325480 MtrunA17_Chr5g0446681 31.788 151 84 4 33 183 29 160 3.12e-11 64.7
Msa0325480 MtrunA17_Chr8g0356471 26.007 273 179 8 73 336 132 390 3.23e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325480 AT1G30220.1 67.418 577 181 4 1 572 1 575 0.0 803
Msa0325480 AT4G16480.2 58.201 567 223 5 1 557 2 564 0.0 650
Msa0325480 AT4G16480.3 58.201 567 223 5 1 557 2 564 0.0 650
Msa0325480 AT4G16480.1 58.201 567 223 5 1 557 2 564 0.0 650
Msa0325480 AT2G35740.1 56.169 543 226 4 24 557 24 563 0.0 631
Msa0325480 AT2G43330.1 55.742 357 149 2 6 361 19 367 5.67e-123 372
Msa0325480 AT2G43330.1 58.333 108 45 0 449 556 375 482 1.80e-37 145
Msa0325480 AT4G36670.1 34.770 348 207 5 23 353 14 358 4.73e-55 194
Msa0325480 AT4G36670.1 38.462 104 64 0 452 555 378 481 1.28e-14 77.0
Msa0325480 AT3G18830.1 33.616 354 205 6 22 353 32 377 3.07e-52 187
Msa0325480 AT3G19940.1 34.627 335 195 6 25 340 24 353 4.61e-51 183
Msa0325480 AT1G07340.1 33.951 324 195 5 33 340 30 350 4.65e-51 183
Msa0325480 AT1G50310.1 33.234 334 202 5 25 340 24 354 6.16e-51 183
Msa0325480 AT2G20780.1 34.402 343 216 5 20 357 49 387 1.82e-50 182
Msa0325480 AT2G20780.1 35.922 103 66 0 452 554 399 501 4.49e-14 75.5
Msa0325480 AT2G18480.1 35.393 356 204 8 23 356 15 366 3.25e-50 181
Msa0325480 AT2G18480.1 40.196 102 61 0 452 553 382 483 6.43e-16 81.3
Msa0325480 AT5G16150.2 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa0325480 AT5G16150.1 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa0325480 AT5G16150.3 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa0325480 AT3G05960.1 33.333 357 208 9 5 342 5 350 1.12e-48 177
Msa0325480 AT2G16120.1 32.092 349 217 4 22 353 22 367 3.27e-47 173
Msa0325480 AT5G26250.1 33.631 336 200 8 25 342 21 351 4.64e-47 172
Msa0325480 AT5G59250.1 32.884 371 224 9 8 358 82 447 7.82e-47 173
Msa0325480 AT5G59250.1 39.815 108 65 0 448 555 451 558 2.35e-14 76.3
Msa0325480 AT2G16130.1 32.277 347 211 5 28 353 24 367 7.84e-46 169
Msa0325480 AT2G16130.1 33.333 102 68 0 452 553 388 489 8.97e-12 68.2
Msa0325480 AT1G11260.1 32.653 343 196 7 23 340 20 352 2.79e-45 168
Msa0325480 AT5G23270.1 33.432 338 197 7 25 340 23 354 1.59e-43 162
Msa0325480 AT5G26340.1 32.544 338 202 7 24 340 21 353 7.57e-43 161
Msa0325480 AT5G17010.1 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa0325480 AT5G17010.3 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa0325480 AT5G17010.4 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa0325480 AT1G05030.1 33.333 324 204 5 33 353 86 400 1.76e-41 157
Msa0325480 AT3G19930.1 31.343 335 208 5 24 340 21 351 3.27e-41 156
Msa0325480 AT3G19930.2 31.343 335 208 5 24 340 21 351 3.27e-41 156
Msa0325480 AT1G77210.2 29.972 357 222 6 2 340 9 355 3.71e-41 156
Msa0325480 AT1G77210.1 29.972 357 222 6 2 340 9 355 3.71e-41 156
Msa0325480 AT2G20780.2 32.934 334 210 7 31 357 3 329 4.49e-40 152
Msa0325480 AT2G20780.2 38.298 94 58 0 461 554 350 443 9.33e-14 74.3
Msa0325480 AT4G21480.1 32.537 335 201 6 25 340 22 350 4.74e-40 153
Msa0325480 AT3G03090.1 30.448 335 215 5 35 353 56 388 1.74e-39 151
Msa0325480 AT3G03090.1 34.615 104 68 0 448 551 397 500 3.74e-11 66.2
Msa0325480 AT3G51490.1 35.714 224 139 4 26 246 4 225 6.01e-38 149
Msa0325480 AT3G51490.1 37.500 96 60 0 452 547 611 706 6.67e-13 72.0
Msa0325480 AT3G51490.2 35.714 224 139 4 26 246 4 225 6.97e-38 149
Msa0325480 AT3G51490.2 37.500 96 60 0 452 547 619 714 6.22e-13 72.4
Msa0325480 AT4G02050.2 30.931 333 205 8 25 338 26 352 1.23e-37 146
Msa0325480 AT4G02050.1 30.931 333 205 8 25 338 26 352 1.23e-37 146
Msa0325480 AT1G05030.2 32.797 311 197 5 46 353 47 348 2.19e-37 145
Msa0325480 AT2G48020.4 30.769 338 218 7 22 357 23 346 3.71e-35 136
Msa0325480 AT2G48020.2 30.769 338 218 7 22 357 23 346 8.78e-35 137
Msa0325480 AT2G48020.2 39.806 103 61 1 452 554 361 462 1.97e-15 79.3
Msa0325480 AT2G48020.1 30.769 338 218 7 22 357 23 346 8.78e-35 137
Msa0325480 AT2G48020.1 39.806 103 61 1 452 554 361 462 1.97e-15 79.3
Msa0325480 AT1G20840.2 34.649 228 142 4 29 253 7 230 9.41e-35 140
Msa0325480 AT1G20840.2 38.462 91 56 0 457 547 623 713 8.64e-14 75.1
Msa0325480 AT1G20840.1 34.649 228 142 4 29 253 7 230 9.41e-35 140
Msa0325480 AT1G20840.1 38.462 91 56 0 457 547 623 713 8.64e-14 75.1
Msa0325480 AT1G34580.1 30.530 321 202 5 37 338 35 353 1.88e-34 137
Msa0325480 AT5G61520.1 27.368 380 249 6 7 363 5 380 2.43e-34 137
Msa0325480 AT1G67300.2 28.371 356 239 6 4 355 31 374 2.50e-34 136
Msa0325480 AT5G18840.1 32.509 283 176 6 78 357 93 363 2.97e-34 136
Msa0325480 AT5G18840.1 33.071 127 81 2 433 556 356 481 3.91e-12 69.3
Msa0325480 AT1G54730.3 31.673 281 180 6 78 357 81 350 3.14e-34 135
Msa0325480 AT1G79820.4 28.324 346 234 6 14 357 44 377 3.34e-34 135
Msa0325480 AT1G54730.2 31.673 281 180 6 78 357 81 350 5.20e-34 135
Msa0325480 AT1G54730.9 31.673 281 180 6 78 357 81 350 5.30e-34 134
Msa0325480 AT1G54730.7 31.673 281 180 6 78 357 81 350 5.30e-34 134
Msa0325480 AT1G67300.4 27.762 353 239 6 4 352 31 371 6.95e-34 134
Msa0325480 AT1G67300.5 27.762 353 239 6 4 352 31 371 6.95e-34 134
Msa0325480 AT1G67300.6 27.762 353 239 6 4 352 31 371 9.13e-34 134
Msa0325480 AT1G67300.7 27.762 353 239 6 4 352 31 371 9.13e-34 134
Msa0325480 AT1G79820.2 28.613 346 233 6 14 357 44 377 1.09e-33 134
Msa0325480 AT1G79820.1 28.613 346 233 6 14 357 44 377 1.09e-33 134
Msa0325480 AT1G67300.1 27.762 353 239 6 4 352 31 371 1.37e-33 134
Msa0325480 AT1G67300.3 27.762 353 239 6 4 352 31 371 1.37e-33 134
Msa0325480 AT4G35300.9 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa0325480 AT4G35300.9 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa0325480 AT4G35300.2 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa0325480 AT4G35300.2 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa0325480 AT4G35300.3 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa0325480 AT4G35300.3 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa0325480 AT4G35300.4 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.4 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT4G35300.8 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.8 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT4G35300.6 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.6 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT4G35300.11 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.11 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT4G35300.1 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.1 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT4G35300.10 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.10 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT4G35300.7 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa0325480 AT4G35300.7 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa0325480 AT3G05155.1 30.114 352 220 6 78 428 76 402 2.13e-33 133
Msa0325480 AT3G05155.1 33.333 99 65 1 452 550 358 455 9.84e-13 70.9
Msa0325480 AT1G75220.1 31.834 289 186 5 78 365 97 375 4.55e-33 132
Msa0325480 AT1G75220.1 31.193 109 71 2 449 554 380 487 1.43e-11 67.4
Msa0325480 AT3G05400.1 31.849 292 185 6 73 362 70 349 1.11e-32 131
Msa0325480 AT3G05155.2 32.830 265 163 5 78 341 76 326 2.77e-32 127
Msa0325480 AT1G19450.1 31.333 300 190 5 78 376 98 382 2.82e-32 130
Msa0325480 AT3G05150.2 32.384 281 179 5 78 357 84 354 3.68e-32 130
Msa0325480 AT3G05150.2 38.095 105 64 1 452 556 369 472 2.35e-15 79.3
Msa0325480 AT3G05150.1 32.384 281 179 5 78 357 84 354 3.75e-32 129
Msa0325480 AT3G05150.1 38.235 102 62 1 452 553 369 469 3.05e-15 79.0
Msa0325480 AT3G05150.3 32.384 281 179 5 78 357 84 354 3.75e-32 129
Msa0325480 AT3G05150.3 38.235 102 62 1 452 553 369 469 3.05e-15 79.0
Msa0325480 AT2G48020.3 30.341 323 209 7 22 342 23 331 4.19e-32 127
Msa0325480 AT1G54730.11 31.321 265 170 6 78 341 81 334 9.29e-32 126
Msa0325480 AT1G08930.1 30.769 286 176 8 78 357 107 376 2.64e-31 127
Msa0325480 AT1G08930.2 30.769 286 176 8 78 357 107 376 2.64e-31 127
Msa0325480 AT5G27360.4 31.118 331 207 6 31 357 40 353 2.85e-31 126
Msa0325480 AT5G27360.3 30.564 337 213 6 31 363 88 407 3.13e-31 127
Msa0325480 AT5G27360.3 33.333 99 65 1 455 553 419 516 4.23e-11 65.9
Msa0325480 AT5G27360.1 30.564 337 213 6 31 363 40 359 6.35e-31 126
Msa0325480 AT5G27360.1 33.333 99 65 1 455 553 371 468 4.33e-11 65.9
Msa0325480 AT1G34580.2 29.801 302 194 4 53 338 4 303 7.67e-31 125
Msa0325480 AT5G61520.2 28.859 298 207 4 67 363 39 332 2.18e-30 124
Msa0325480 AT1G50310.2 33.990 203 130 3 139 340 12 211 2.37e-30 122
Msa0325480 AT3G05165.3 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa0325480 AT3G05165.2 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa0325480 AT3G05165.1 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa0325480 AT5G27350.1 30.435 345 222 5 31 370 36 367 2.68e-29 121
Msa0325480 AT3G05165.4 29.021 286 193 3 78 363 79 354 3.08e-29 121
Msa0325480 AT3G05165.5 29.021 286 193 3 78 363 79 354 3.08e-29 121
Msa0325480 AT3G05165.6 29.021 286 193 3 78 363 79 354 4.57e-29 121
Msa0325480 AT3G05160.1 29.655 290 186 5 78 363 70 345 4.58e-29 120
Msa0325480 AT3G05160.1 34.343 99 64 1 455 553 357 454 6.97e-11 65.1
Msa0325480 AT3G05160.3 29.655 290 186 5 78 363 21 296 5.66e-29 119
Msa0325480 AT3G05160.3 34.343 99 64 1 455 553 308 405 9.70e-11 64.3
Msa0325480 AT3G05160.2 29.655 290 186 5 78 363 21 296 5.66e-29 119
Msa0325480 AT3G05160.2 34.343 99 64 1 455 553 308 405 9.70e-11 64.3
Msa0325480 AT1G54730.10 32.751 229 146 5 78 305 81 302 8.40e-29 117
Msa0325480 AT1G54730.6 32.751 229 146 5 78 305 81 302 8.40e-29 117
Msa0325480 AT1G54730.4 30.824 279 177 8 78 348 81 351 9.02e-29 119
Msa0325480 AT1G54730.5 30.824 279 177 8 78 348 81 351 1.44e-28 119
Msa0325480 AT1G54730.5 31.933 119 80 1 432 550 324 441 1.52e-13 73.6
Msa0325480 AT1G54730.8 30.824 279 177 8 78 348 81 351 1.51e-28 118
Msa0325480 AT3G05400.2 30.822 292 168 7 73 362 70 329 1.97e-28 118
Msa0325480 AT5G17010.2 31.618 272 160 8 35 284 53 320 7.48e-28 117
Msa0325480 AT3G51490.3 35.429 175 109 3 75 246 2 175 9.08e-28 118
Msa0325480 AT3G51490.3 37.500 96 60 0 452 547 569 664 6.09e-13 72.0
Msa0325480 AT1G08920.1 31.502 273 169 7 78 346 81 339 1.72e-27 116
Msa0325480 AT1G08920.3 31.502 273 169 7 78 346 81 339 1.90e-27 115
Msa0325480 AT1G08920.2 31.227 269 167 7 78 342 81 335 5.69e-27 114
Msa0325480 AT1G08890.1 31.317 281 181 4 78 357 76 345 7.84e-27 114
Msa0325480 AT5G27360.2 31.086 267 166 5 101 363 3 255 1.27e-26 112
Msa0325480 AT5G27360.2 32.353 102 68 1 455 556 267 367 5.20e-11 65.1
Msa0325480 AT5G27360.5 31.086 267 166 5 101 363 3 255 1.27e-26 112
Msa0325480 AT5G27360.5 32.353 102 68 1 455 556 267 367 5.20e-11 65.1
Msa0325480 AT1G08900.4 30.882 272 176 5 78 348 74 334 2.71e-26 112
Msa0325480 AT1G08900.5 29.964 277 182 5 73 348 27 292 4.77e-26 111
Msa0325480 AT1G08900.1 30.147 272 178 5 78 348 74 334 5.67e-26 111
Msa0325480 AT1G08900.1 32.353 102 68 1 454 555 360 460 9.74e-11 64.7
Msa0325480 AT1G08900.2 30.147 272 178 5 78 348 74 334 5.67e-26 111
Msa0325480 AT1G08900.2 32.353 102 68 1 454 555 360 460 9.74e-11 64.7
Msa0325480 AT3G20460.1 27.458 295 197 6 78 366 102 385 5.84e-26 112
Msa0325480 AT1G08900.3 30.147 272 178 5 78 348 66 326 6.08e-26 111
Msa0325480 AT1G08900.3 32.353 102 68 1 454 555 352 452 9.71e-11 64.7
Msa0325480 AT4G04750.1 28.369 282 190 5 78 357 85 356 1.10e-24 107
Msa0325480 AT4G04750.1 34.000 100 65 1 452 551 371 469 6.95e-11 65.1
Msa0325480 AT4G04750.2 28.369 282 190 5 78 357 85 356 1.10e-24 107
Msa0325480 AT4G04750.2 34.000 100 65 1 452 551 371 469 6.95e-11 65.1
Msa0325480 AT4G04750.3 28.369 282 190 5 78 357 129 400 1.41e-24 108
Msa0325480 AT4G04750.3 34.000 100 65 1 452 551 415 513 4.78e-11 65.9
Msa0325480 AT1G77210.3 33.005 203 132 3 139 340 7 206 1.17e-23 103
Msa0325480 AT4G04760.3 29.110 292 188 7 78 363 21 299 2.67e-23 103
Msa0325480 AT4G04760.3 32.203 118 74 3 436 553 297 408 3.80e-11 65.9
Msa0325480 AT4G04760.1 29.110 292 188 7 78 363 80 358 3.13e-23 103
Msa0325480 AT4G04760.1 32.203 118 74 3 436 553 356 467 4.72e-11 65.9
Msa0325480 AT1G79820.3 28.016 257 176 4 14 268 44 293 8.74e-22 99.0
Msa0325480 AT4G04760.2 29.057 265 169 7 78 336 80 331 8.11e-20 93.2
Msa0325480 AT4G04760.2 32.500 120 75 3 434 553 351 464 8.92e-12 68.2
Msa0325480 AT4G35300.5 40.625 96 57 0 452 547 428 523 7.68e-16 80.9
Msa0325480 AT1G79820.5 27.044 159 114 1 110 268 75 231 7.22e-11 64.7

Find 141 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGACATTGGTTATCTTT+TGG 0.215526 2_4:-32925460 Msa0325480:three_prime_UTR
GTTTCATAGCTTAAATTAAT+TGG 0.217938 2_4:-32925595 Msa0325480:three_prime_UTR
GCAATTGCTGGAGCAATTAT+TGG 0.236188 2_4:-32927584 Msa0325480:CDS
AGTATTAAATGATTTCTAAT+TGG 0.243935 2_4:-32925302 Msa0325480:three_prime_UTR
GGAATTGTATGAAGTGTATA+AGG 0.246709 2_4:-32926261 Msa0325480:CDS
CAGCTATGAACAATCATAAT+TGG 0.292908 2_4:-32926282 Msa0325480:CDS
TTGACTTTGACTGTGGCAAT+TGG 0.311315 2_4:-32925836 Msa0325480:CDS
CTTCTGTCACTAATCACTTC+TGG 0.342039 2_4:-32926514 Msa0325480:CDS
TTTAATAGGGTCAATTATCT+TGG 0.346819 2_4:-32927489 Msa0325480:CDS
TGCGTGTATGTTTGGATTAA+CGG 0.349020 2_4:-32925544 Msa0325480:three_prime_UTR
GGTAGAGTATTTGTTGGTCT+TGG 0.352669 2_4:-32927434 Msa0325480:CDS
ACCTCCTTCCATGCTGTTGT+TGG 0.357762 2_4:+32930985 None:intergenic
ATAGCTGCTGTCTTGAACTC+AGG 0.365217 2_4:+32926298 None:intergenic
CATGGAACTGTTCCCATTCC+AGG 0.373716 2_4:+32925962 None:intergenic
TTTGATTTGGTCAAATTTGT+TGG 0.375895 2_4:-32925495 Msa0325480:three_prime_UTR
TTCTCCCTCTGAGAAATAAT+TGG 0.381457 2_4:-32925657 Msa0325480:exon
GATTTGTGCAGATCAAGTTT+TGG 0.388591 2_4:-32925691 Msa0325480:CDS
ACAATGAGAGTAGCTGGATT+TGG 0.389582 2_4:+32927458 None:intergenic
CGTATGATTAGTTGGATTGC+TGG 0.392546 2_4:-32925393 Msa0325480:three_prime_UTR
CATGTCTTCCTTTCTACTGC+TGG 0.393342 2_4:+32930063 None:intergenic
AGAAAGGAAGACATGGCTTC+AGG 0.394649 2_4:-32930055 Msa0325480:intron
AAAGCAGACATATCTGCTTC+TGG 0.397219 2_4:+32930959 None:intergenic
ATCAGTTGAAATGGAGCTTA+AGG 0.397966 2_4:-32926710 Msa0325480:CDS
TTGATTTGGTCAAATTTGTT+GGG 0.403219 2_4:-32925494 Msa0325480:three_prime_UTR
ATTGTTGGTAGAGTATTTGT+TGG 0.405460 2_4:-32927440 Msa0325480:CDS
GAGAATGTTTATCTCTATCA+TGG 0.407356 2_4:-32930934 Msa0325480:CDS
GTTGCGGTGTCACTTTGATT+TGG 0.410522 2_4:-32925508 Msa0325480:three_prime_UTR
ATATATTTCATTGACAAAAC+CGG 0.410815 2_4:-32926463 Msa0325480:CDS
AAATGGGTCGTATGATTAGT+TGG 0.412737 2_4:-32925401 Msa0325480:three_prime_UTR
GGCACATGGAGGTGGATGTT+AGG 0.417581 2_4:-32927146 Msa0325480:CDS
ATACTTGTTGTGTTGTGTTT+CGG 0.418328 2_4:+32931118 None:intergenic
GGATGGATCAATGATAGATT+TGG 0.419766 2_4:-32927548 Msa0325480:CDS
GCTTCGCCAACTAGAGTTAG+AGG 0.419914 2_4:-32927368 Msa0325480:CDS
ATTGAAAGAATCAGTTGAAA+TGG 0.425753 2_4:-32926719 Msa0325480:CDS
CATATTCTTCTCACCTGGAA+TGG 0.431782 2_4:-32925975 Msa0325480:CDS
GCAATTATTGGAGCAGCAAT+TGG 0.438593 2_4:-32927572 Msa0325480:CDS
GTATGTGCAGGAGTTATATC+TGG 0.439009 2_4:-32930114 Msa0325480:intron
CCTTCCATTGTTCAGTTGGC+CGG 0.440677 2_4:-32926562 Msa0325480:CDS
AGCAATTGCTGTACTCACTA+TGG 0.443192 2_4:+32927598 None:intergenic
ACTTCTGGCCTCAATGCAAT+AGG 0.445200 2_4:-32926499 Msa0325480:CDS
CATCAACTTGGCCTTTACTA+AGG 0.446650 2_4:-32927288 Msa0325480:intron
AAAGGTTGTCCTAGCAACTT+TGG 0.448496 2_4:-32926031 Msa0325480:CDS
GTATTTGTTGGTCTTGGTGT+CGG 0.448585 2_4:-32927428 Msa0325480:CDS
ATTGGAACCCCTTTAGTCTC+TGG 0.450446 2_4:+32925743 None:intergenic
GTTAGAAGAGGTTTATATGC+AGG 0.450905 2_4:-32926643 Msa0325480:CDS
AAAGGCCAAGTTGATGAGAT+AGG 0.452110 2_4:+32927295 None:intergenic
TGGTGTCGGGATGGCTTCAA+TGG 0.453048 2_4:-32927414 Msa0325480:CDS
CCTTTCCTATCTCATCAACT+TGG 0.453480 2_4:-32927300 Msa0325480:CDS
TGTTGATACCGACAAATTGT+TGG 0.456542 2_4:+32926602 None:intergenic
TGAAATTTGCAGACCAAGCC+AGG 0.459373 2_4:-32926121 Msa0325480:intron
AACATCCACCTCCATGTGCC+TGG 0.460125 2_4:+32927149 None:intergenic
ATCTATCCATTGAGGTATAG+AGG 0.460517 2_4:-32925923 Msa0325480:CDS
ATGTCTTCCTTTCTACTGCT+GGG 0.469742 2_4:+32930064 None:intergenic
TATTTGTTGGTCTTGGTGTC+GGG 0.470395 2_4:-32927427 Msa0325480:CDS
CTGTGGCAATTGGACCTGCT+TGG 0.472061 2_4:-32925826 Msa0325480:CDS
CAATGCAAGTTTCTTCCTCC+CGG 0.473299 2_4:+32926444 None:intergenic
AATCCAGCTACTCTCATTGT+TGG 0.476349 2_4:-32927455 Msa0325480:CDS
ATATTCTTCTCACCTGGAAT+GGG 0.477734 2_4:-32925974 Msa0325480:CDS
AAAGCAAGACGAAGAACATA+AGG 0.481359 2_4:+32930905 None:intergenic
CTACCAACAATGAGAGTAGC+TGG 0.485518 2_4:+32927452 None:intergenic
AGGGGTTCCAATGGAGGAAG+TGG 0.488028 2_4:-32925732 Msa0325480:CDS
GATTAAACATGCACCTGGCT+TGG 0.488753 2_4:+32926108 None:intergenic
AGGCACCAGGCACATGGAGG+TGG 0.488950 2_4:-32927154 Msa0325480:CDS
CATATTCCTCTATACCTCAA+TGG 0.493473 2_4:+32925917 None:intergenic
AGAGGTTTATATGCAGGTTG+TGG 0.493521 2_4:-32926637 Msa0325480:CDS
ATAGTGAGTACAGCAATTGC+TGG 0.496005 2_4:-32927596 Msa0325480:CDS
CGGTGAATTTGTCCGAGTTG+CGG 0.500173 2_4:-32925524 Msa0325480:three_prime_UTR
AACTCTAGTTGGCGAAGCCT+CGG 0.502911 2_4:+32927373 None:intergenic
TTGTGCTGCTCCTGGTGACA+TGG 0.507167 2_4:-32926215 Msa0325480:intron
ATGAATTCCCAGCAGTAGAA+AGG 0.509817 2_4:-32930071 Msa0325480:CDS
AGTTTCACACACCTTAGTAA+AGG 0.510939 2_4:+32927277 None:intergenic
CATAGAGCATGGTACACAAA+AGG 0.511414 2_4:-32926049 Msa0325480:CDS
CTGACCAATTATTTCTCAGA+GGG 0.515286 2_4:+32925653 None:intergenic
CTTGCATTGATTAGTTTGAC+CGG 0.517094 2_4:-32926430 Msa0325480:CDS
CACACCAACAACAGCATGGA+AGG 0.522819 2_4:-32930989 Msa0325480:exon
TCGCTCAGGCACCAGGCACA+TGG 0.524907 2_4:-32927160 Msa0325480:intron
CTGGAATGGGAACAGTTCCA+TGG 0.524999 2_4:-32925961 Msa0325480:CDS
CAGTCCTTCCATTGTTCAGT+TGG 0.529091 2_4:-32926566 Msa0325480:CDS
ATCCTTCTTGACTTTGACTG+TGG 0.529313 2_4:-32925843 Msa0325480:CDS
AGAGCACCTCTAACTCTAGT+TGG 0.534348 2_4:+32927362 None:intergenic
CACTTCCCGAGTCACCTCGT+TGG 0.534418 2_4:-32927079 Msa0325480:CDS
ATACTCTCCACTTCCTCCAT+TGG 0.537148 2_4:+32925725 None:intergenic
GTACAACCAACGAGGTGACT+CGG 0.541162 2_4:+32927073 None:intergenic
AAAACAACATCTGTTAGAAG+AGG 0.541737 2_4:-32926655 Msa0325480:CDS
GTTGTCCTAGCAACTTTGGT+TGG 0.543320 2_4:-32926027 Msa0325480:CDS
ATTTCAGAGTTAACAACCCA+TGG 0.544878 2_4:+32925944 None:intergenic
TTCGCTTTCACGAAAAGTAA+CGG 0.545737 2_4:+32926381 None:intergenic
TGATTTCTCGCTCAGGCACC+AGG 0.546000 2_4:-32927167 Msa0325480:intron
ATTATTGGAGCAGCAATTGG+TGG 0.548778 2_4:-32927569 Msa0325480:CDS
ATTCTAAATATGCAAGACAT+TGG 0.551719 2_4:-32925471 Msa0325480:three_prime_UTR
TTGGAGCAGCAATTGGTGGA+TGG 0.555014 2_4:-32927565 Msa0325480:CDS
AGCACAATTTGTATCACAGC+AGG 0.556466 2_4:+32927110 None:intergenic
TACAACCAACGAGGTGACTC+GGG 0.561888 2_4:+32927074 None:intergenic
ACCTCGTTGGTTGTACCGCA+AGG 0.564238 2_4:-32927066 Msa0325480:intron
AGAGACTAAAGGGGTTCCAA+TGG 0.566345 2_4:-32925741 Msa0325480:CDS
GAATTGTATGAAGTGTATAA+GGG 0.566500 2_4:-32926260 Msa0325480:CDS
TAGCTGCTGTCTTGAACTCA+GGG 0.566600 2_4:+32926299 None:intergenic
TGCCACAGTCAAAGTCAAGA+AGG 0.567232 2_4:+32925841 None:intergenic
TGTTGGTCTTGGTGTCGGGA+TGG 0.567461 2_4:-32927423 Msa0325480:CDS
TTCGAGATTAAACATGCACC+TGG 0.569618 2_4:+32926103 None:intergenic
TACATCATATTCTTCTCACC+TGG 0.570930 2_4:-32925980 Msa0325480:CDS
AGGGCTGAGTCCACTACTTG+TGG 0.575120 2_4:-32926241 Msa0325480:CDS
TATATTTCATTGACAAAACC+GGG 0.581152 2_4:-32926462 Msa0325480:CDS
CTGTAGAGGATTGTGAAATG+AGG 0.586256 2_4:-32925355 Msa0325480:three_prime_UTR
GACTAAAGGGGTTCCAATGG+AGG 0.587381 2_4:-32925738 Msa0325480:CDS
GCGATCCAACCAAAGTTGCT+AGG 0.590293 2_4:+32926022 None:intergenic
TGGAATGGGAACAGTTCCAT+GGG 0.592733 2_4:-32925960 Msa0325480:CDS
AGAATATGATGTAGAGTGCG+AGG 0.597439 2_4:+32925990 None:intergenic
CCGGCCAACTGAACAATGGA+AGG 0.599512 2_4:+32926562 None:intergenic
AAATTGAACCTATTGCATTG+AGG 0.600439 2_4:+32926491 None:intergenic
CTTTCGATGACACTAACCAT+TGG 0.601711 2_4:+32926349 None:intergenic
ATCAAAGTGACACCGCAACT+CGG 0.602637 2_4:+32925512 None:intergenic
CAGCAGTAGAAAGGAAGACA+TGG 0.606845 2_4:-32930062 Msa0325480:CDS
AGAACACACCAACAACAGCA+TGG 0.608073 2_4:-32930993 Msa0325480:exon
AACAATGTAACAGGGCAAAG+AGG 0.608199 2_4:-32926806 Msa0325480:intron
AATAGCATCAACAACGGTGT+GGG 0.610367 2_4:-32925888 Msa0325480:CDS
ACTCTGAAATCTATCCATTG+AGG 0.612345 2_4:-32925931 Msa0325480:CDS
AAGCGAAATTCATGCACCAA+TGG 0.615781 2_4:-32926365 Msa0325480:CDS
AAGAGATTTACCATGTCACC+AGG 0.619446 2_4:+32926205 None:intergenic
AGCACAAAATCCACAAGTAG+TGG 0.619823 2_4:+32926231 None:intergenic
AATCCTCATGAAATCTGTAG+AGG 0.620619 2_4:-32925369 Msa0325480:three_prime_UTR
AATATCATGAAAGTCCAAGC+AGG 0.622278 2_4:+32925812 None:intergenic
ATCTCCTTTGTATATCTCCG+AGG 0.630924 2_4:-32927390 Msa0325480:CDS
CCAAGTTGATGAGATAGGAA+AGG 0.636278 2_4:+32927300 None:intergenic
TCTGACCAATTATTTCTCAG+AGG 0.636844 2_4:+32925652 None:intergenic
GAATATGATGTAGAGTGCGA+GGG 0.637075 2_4:+32925991 None:intergenic
AGAAGGATTGTGAAACAACA+AGG 0.638416 2_4:+32925858 None:intergenic
AATCCTCTACAGATTTCATG+AGG 0.647807 2_4:+32925366 None:intergenic
GCGGCGTTGATCATAGAGCA+TGG 0.648819 2_4:-32926060 Msa0325480:CDS
GAATAGCATCAACAACGGTG+TGG 0.653838 2_4:-32925889 Msa0325480:CDS
CGGTTAAAAGAGTCAAAGAG+AGG 0.654748 2_4:+32926401 None:intergenic
GAAGCCTCGGAGATATACAA+AGG 0.655795 2_4:+32927386 None:intergenic
AGGTATAGAGGAATATGCGG+AGG 0.666557 2_4:-32925911 Msa0325480:CDS
CTCAGGCACCAGGCACATGG+AGG 0.675695 2_4:-32927157 Msa0325480:intron
ACCAACAACAGCATGGAAGG+AGG 0.679431 2_4:-32930986 Msa0325480:exon
AAAACCGGCCAACTGAACAA+TGG 0.684628 2_4:+32926558 None:intergenic
TTGAGGTATAGAGGAATATG+CGG 0.686287 2_4:-32925914 Msa0325480:CDS
AGTCAAAGAGAGGACAACAC+CGG 0.714867 2_4:+32926411 None:intergenic
CGGAGGAATAGCATCAACAA+CGG 0.719019 2_4:-32925894 Msa0325480:CDS
ATTTCATTGACAAAACCGGG+AGG 0.748225 2_4:-32926459 Msa0325480:CDS
ACCTTGCGGTACAACCAACG+AGG 0.754260 2_4:+32927065 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGTATATATACTTTTTT+AGG - chr2_4:32926091-32926110 Msa0325480:CDS 10.0%
!!! TTTGTATATATACTTTTTTA+GGG - chr2_4:32926092-32926111 Msa0325480:CDS 10.0%
!! ATAATATAAAAAAATTGGAT+TGG - chr2_4:32926572-32926591 Msa0325480:CDS 10.0%
!! TAAGATCAAATTTAATATAT+CGG - chr2_4:32926839-32926858 Msa0325480:intron 10.0%
!! ACATAAAATATGAAAATTAA+TGG + chr2_4:32927327-32927346 None:intergenic 10.0%
!!! TATGTGATTTTATATTTATT+AGG - chr2_4:32927782-32927801 Msa0325480:intron 10.0%
!!! ATGTGATTTTATATTTATTA+GGG - chr2_4:32927783-32927802 Msa0325480:intron 10.0%
!!! ATTTTATTTTTTTAACATTC+CGG + chr2_4:32928722-32928741 None:intergenic 10.0%
!!! TACTGATTTTATGAAATATA+AGG + chr2_4:32925966-32925985 None:intergenic 15.0%
!!! TTGTATATATACTTTTTTAG+GGG - chr2_4:32926093-32926112 Msa0325480:CDS 15.0%
!! ATAAATAGATTAGATTTACA+TGG + chr2_4:32927075-32927094 None:intergenic 15.0%
!!! ATTGTTTTTGACAAATTTTT+TGG - chr2_4:32927164-32927183 Msa0325480:intron 15.0%
!!! TGTGATTTTATATTTATTAG+GGG - chr2_4:32927784-32927803 Msa0325480:intron 15.0%
!! TAAAAAAAGAGTAAACTATT+TGG + chr2_4:32927974-32927993 None:intergenic 15.0%
!!! AGATTTAGTATATTACTTTT+TGG + chr2_4:32928065-32928084 None:intergenic 15.0%
!!! TTTTATTTTTTTAACATTCC+GGG + chr2_4:32928721-32928740 None:intergenic 15.0%
!! GATAAAAAAAAAAATGTAAC+AGG - chr2_4:32928791-32928810 Msa0325480:intron 15.0%
!! AGTATTAAATGATTTCTAAT+TGG - chr2_4:32931113-32931132 Msa0325480:five_prime_UTR 15.0%
!! AAAAATTTATGAAGAAACAG+AGG + chr2_4:32925599-32925618 None:intergenic 20.0%
!!! ATTCTTTTTAACTTCAATTG+TGG - chr2_4:32925731-32925750 Msa0325480:CDS 20.0%
!!! ATTATGTAAAGGTTGATAAA+TGG - chr2_4:32926275-32926294 Msa0325480:CDS 20.0%
!!! ATTTCAACCTTTTACTTTAA+TGG - chr2_4:32926449-32926468 Msa0325480:CDS 20.0%
!! TTAAAGTCCATTAAAGTAAA+AGG + chr2_4:32926459-32926478 None:intergenic 20.0%
!! GTTCAAAAAAAGACATTATT+AGG + chr2_4:32927447-32927466 None:intergenic 20.0%
!! AATTCAATGTAATTATGTCT+CGG + chr2_4:32927630-32927649 None:intergenic 20.0%
!! TTGATATAATTTAGAAGAGA+TGG + chr2_4:32927740-32927759 None:intergenic 20.0%
!!! ATCACATAATTTAAAACAGA+TGG + chr2_4:32927770-32927789 None:intergenic 20.0%
!!! GTGATTTTATATTTATTAGG+GGG - chr2_4:32927785-32927804 Msa0325480:intron 20.0%
!! AGTTTGGAAAAATTAATGAT+GGG + chr2_4:32927812-32927831 None:intergenic 20.0%
!! TTGACTAATTTATAAGAGTT+TGG + chr2_4:32927828-32927847 None:intergenic 20.0%
!! TTTGATGAGATAAATTACTT+GGG + chr2_4:32928015-32928034 None:intergenic 20.0%
!!! TTTTGATGAGATAAATTACT+TGG + chr2_4:32928016-32928035 None:intergenic 20.0%
!!! AATTTATTCCTTTTCATTTG+TGG + chr2_4:32928089-32928108 None:intergenic 20.0%
!!! GAATAAATTTTTCCTGAAAA+AGG - chr2_4:32928100-32928119 Msa0325480:intron 20.0%
!!! CTTTTTAACAATTATGGAAA+CGG + chr2_4:32928455-32928474 None:intergenic 20.0%
!! AAAATATAATGCTTCTTTGT+TGG - chr2_4:32928622-32928641 Msa0325480:intron 20.0%
!! ACATATAAAAACGAAAAAAG+AGG + chr2_4:32929184-32929203 None:intergenic 20.0%
!!! CTTTTTTCGTTTTTATATGT+CGG - chr2_4:32929184-32929203 Msa0325480:intron 20.0%
!! ATATATTTCATTGACAAAAC+CGG - chr2_4:32929952-32929971 Msa0325480:intron 20.0%
!! TGATGTAAAAATATCACATT+GGG + chr2_4:32930237-32930256 None:intergenic 20.0%
!! ATGATGTAAAAATATCACAT+TGG + chr2_4:32930238-32930257 None:intergenic 20.0%
!! AAAAATACAGAAGATATTTG+CGG - chr2_4:32930336-32930355 Msa0325480:intron 20.0%
!! AAAAATGATGACAAAGAAAA+TGG + chr2_4:32930649-32930668 None:intergenic 20.0%
!! GTTTCATAGCTTAAATTAAT+TGG - chr2_4:32930820-32930839 Msa0325480:intron 20.0%
!!! AGTTAGCATTTTAATTCAAA+TGG - chr2_4:32930997-32931016 Msa0325480:five_prime_UTR 20.0%
!!! GTTAGCATTTTAATTCAAAT+GGG - chr2_4:32930998-32931017 Msa0325480:five_prime_UTR 20.0%
! TCATGCATTTAAACAATCAA+CGG - chr2_4:32925916-32925935 Msa0325480:CDS 25.0%
!!! TGATTTTAATGTTGAGTCAA+AGG - chr2_4:32926011-32926030 Msa0325480:CDS 25.0%
! AAGAAAAGCTATTATTTGAC+TGG - chr2_4:32926190-32926209 Msa0325480:intron 25.0%
!! GAAAAGGGATTTATTTGTTA+AGG + chr2_4:32926423-32926442 None:intergenic 25.0%
! ATAGATTAGATTTACATGGT+TGG + chr2_4:32927071-32927090 None:intergenic 25.0%
!! ATGATACGTATGTATTCTTT+TGG - chr2_4:32927139-32927158 Msa0325480:CDS 25.0%
! TATGAAAATTAATGGTTGAG+AGG + chr2_4:32927319-32927338 None:intergenic 25.0%
!!! TCAATGGTATTTTAGTTATG+TGG + chr2_4:32927400-32927419 None:intergenic 25.0%
! CAAAAAAAGACATTATTAGG+AGG + chr2_4:32927444-32927463 None:intergenic 25.0%
!! TTTTTGAACAAATGTTCGAT+TGG - chr2_4:32927458-32927477 Msa0325480:CDS 25.0%
! ATGCTTAATTCATAGATCAA+TGG + chr2_4:32927562-32927581 None:intergenic 25.0%
!!! GCATATACACTTTTTGAATT+AGG - chr2_4:32927578-32927597 Msa0325480:CDS 25.0%
!!! TCTCAAAATTTTAGTTGTGT+CGG - chr2_4:32927658-32927677 Msa0325480:intron 25.0%
! GAGTTTGGAAAAATTAATGA+TGG + chr2_4:32927813-32927832 None:intergenic 25.0%
!! AACCATGAGTTTTCAAATAA+AGG - chr2_4:32927846-32927865 Msa0325480:intron 25.0%
!! ATCCTTTATTTGAAAACTCA+TGG + chr2_4:32927851-32927870 None:intergenic 25.0%
!!! GTTATTTCTAACCTAAAATG+AGG + chr2_4:32927900-32927919 None:intergenic 25.0%
! CGTTTCCATAATTGTTAAAA+AGG - chr2_4:32928453-32928472 Msa0325480:intron 25.0%
!! TGCATCCTTTTTAACAATTA+TGG + chr2_4:32928461-32928480 None:intergenic 25.0%
!!! TGTTTTCATTCTTTGAGAAA+AGG + chr2_4:32928587-32928606 None:intergenic 25.0%
! AATTGACCCTATTAAAAAGA+GGG + chr2_4:32928922-32928941 None:intergenic 25.0%
! TAATTGACCCTATTAAAAAG+AGG + chr2_4:32928923-32928942 None:intergenic 25.0%
! TTTAATAGGGTCAATTATCT+TGG - chr2_4:32928926-32928945 Msa0325480:intron 25.0%
! ATCTTCTTTAACAATGTAAC+AGG - chr2_4:32929600-32929619 Msa0325480:intron 25.0%
! TCTTCTTTAACAATGTAACA+GGG - chr2_4:32929601-32929620 Msa0325480:intron 25.0%
!! AATTCTGAAAAAGATATACG+AGG - chr2_4:32929645-32929664 Msa0325480:intron 25.0%
! ATTGAAAGAATCAGTTGAAA+TGG - chr2_4:32929696-32929715 Msa0325480:intron 25.0%
! TATATTTCATTGACAAAACC+GGG - chr2_4:32929953-32929972 Msa0325480:intron 25.0%
! GAATTGTATGAAGTGTATAA+GGG - chr2_4:32930155-32930174 Msa0325480:intron 25.0%
! GATGTAAAAATATCACATTG+GGG + chr2_4:32930236-32930255 None:intergenic 25.0%
!!! TTTGATTTGGTCAAATTTGT+TGG - chr2_4:32930920-32930939 Msa0325480:CDS 25.0%
!!! TTGATTTGGTCAAATTTGTT+GGG - chr2_4:32930921-32930940 Msa0325480:CDS 25.0%
! ATTCTAAATATGCAAGACAT+TGG - chr2_4:32930944-32930963 Msa0325480:CDS 25.0%
GAGAATGTTTATCTCTATCA+TGG - chr2_4:32925481-32925500 Msa0325480:three_prime_UTR 30.0%
ATTTATGAAGAAACAGAGGA+GGG + chr2_4:32925595-32925614 None:intergenic 30.0%
AATTTATGAAGAAACAGAGG+AGG + chr2_4:32925596-32925615 None:intergenic 30.0%
!!! CTTTTTAACTTCAATTGTGG+CGG - chr2_4:32925734-32925753 Msa0325480:CDS 30.0%
AATGCATGAAATTGCGATAA+CGG + chr2_4:32925905-32925924 None:intergenic 30.0%
CATGCATTTAAACAATCAAC+GGG - chr2_4:32925917-32925936 Msa0325480:CDS 30.0%
GGTTGAAATTCACAAGAAAA+GGG + chr2_4:32926438-32926457 None:intergenic 30.0%
AGGTTGAAATTCACAAGAAA+AGG + chr2_4:32926439-32926458 None:intergenic 30.0%
!!! TGTTGTTTTGTGAATCAAGT+TGG + chr2_4:32926512-32926531 None:intergenic 30.0%
TTTCTATGTATCACAACACT+TGG - chr2_4:32926543-32926562 Msa0325480:CDS 30.0%
TTGATCTTATCCGTTAAATC+CGG + chr2_4:32926828-32926847 None:intergenic 30.0%
AGGTAAATTTGCCAATAGAA+GGG + chr2_4:32927018-32927037 None:intergenic 30.0%
TAGGTAAATTTGCCAATAGA+AGG + chr2_4:32927019-32927038 None:intergenic 30.0%
AAACTCTAAATTCATCGAGT+AGG + chr2_4:32927038-32927057 None:intergenic 30.0%
TGACATGTATATGTGAATAG+AGG - chr2_4:32927197-32927216 Msa0325480:intron 30.0%
ATATGTGAATAGAGGAATAG+AGG - chr2_4:32927205-32927224 Msa0325480:intron 30.0%
TACCATTGAAATTCTCTAAG+AGG - chr2_4:32927411-32927430 Msa0325480:CDS 30.0%
TCATAGATCAATGGAAATTG+TGG + chr2_4:32927553-32927572 None:intergenic 30.0%
ATTTCTAACCTAAAATGAGG+TGG + chr2_4:32927897-32927916 None:intergenic 30.0%
TAAATCTGCCACAAATGAAA+AGG - chr2_4:32928078-32928097 Msa0325480:intron 30.0%
!! TTGTATTGATTCTGTGGATT+TGG - chr2_4:32928208-32928227 Msa0325480:intron 30.0%
ACCAATTTGAATAGTTGAAC+CGG - chr2_4:32928327-32928346 Msa0325480:intron 30.0%
TAACTGAATTAGAGACTCTT+CGG + chr2_4:32928365-32928384 None:intergenic 30.0%
AATGTTTGAATGTTCAAGTC+CGG - chr2_4:32928391-32928410 Msa0325480:intron 30.0%
TCTAAGAAACATCTGAGTTA+TGG + chr2_4:32928424-32928443 None:intergenic 30.0%
AGGATGCAATCAAATCTATA+AGG - chr2_4:32928473-32928492 Msa0325480:intron 30.0%
! CAGATACCCTCTTTTTAATA+GGG - chr2_4:32928913-32928932 Msa0325480:intron 30.0%
! ATTGTTGGTAGAGTATTTGT+TGG - chr2_4:32928975-32928994 Msa0325480:intron 30.0%
ACATATTACAGTCGCATAAT+CGG - chr2_4:32929390-32929409 Msa0325480:intron 30.0%
ATTAAGTAAAGTCAGAACGT+GGG + chr2_4:32929420-32929439 None:intergenic 30.0%
AATTAAGTAAAGTCAGAACG+TGG + chr2_4:32929421-32929440 None:intergenic 30.0%
ACGTTCTGACTTTACTTAAT+TGG - chr2_4:32929420-32929439 Msa0325480:intron 30.0%
!! AAAAAAGTTGCGTTGATTGA+TGG + chr2_4:32929517-32929536 None:intergenic 30.0%
AAAACAACATCTGTTAGAAG+AGG - chr2_4:32929760-32929779 Msa0325480:intron 30.0%
! GCATTTTTCCAACAATTTGT+CGG - chr2_4:32929805-32929824 Msa0325480:intron 30.0%
AAATTGAACCTATTGCATTG+AGG + chr2_4:32929927-32929946 None:intergenic 30.0%
CAGCTATGAACAATCATAAT+TGG - chr2_4:32930133-32930152 Msa0325480:intron 30.0%
GGAATTGTATGAAGTGTATA+AGG - chr2_4:32930154-32930173 Msa0325480:intron 30.0%
!! CAAGACATTGGTTATCTTTT+GGG - chr2_4:32930956-32930975 Msa0325480:CDS 30.0%
AAAGCAAGACGAAGAACATA+AGG + chr2_4:32925513-32925532 None:intergenic 35.0%
CAGTATCATAGCCAAAAAGA+AGG + chr2_4:32925554-32925573 None:intergenic 35.0%
!!! CTTCTTTTTGGCTATGATAC+TGG - chr2_4:32925552-32925571 Msa0325480:three_prime_UTR 35.0%
GTGTATGTTTAGTATGACGA+TGG + chr2_4:32925860-32925879 None:intergenic 35.0%
!!! TGTTTTGTGAATCAAGTTGG+TGG + chr2_4:32926509-32926528 None:intergenic 35.0%
GTCCTCTTAGAGAATTTCAA+TGG + chr2_4:32927416-32927435 None:intergenic 35.0%
! AAATGTTCGATTGGTCCAAT+TGG - chr2_4:32927467-32927486 Msa0325480:CDS 35.0%
! AATGTTCGATTGGTCCAATT+GGG - chr2_4:32927468-32927487 Msa0325480:CDS 35.0%
! CAGGCTTTAACTACTTTGTT+GGG + chr2_4:32927501-32927520 None:intergenic 35.0%
! TCAGGCTTTAACTACTTTGT+TGG + chr2_4:32927502-32927521 None:intergenic 35.0%
! TTCAACTTTCCATTGGTTGT+TGG + chr2_4:32927528-32927547 None:intergenic 35.0%
! TGTGGTTTTCAACTTTCCAT+TGG + chr2_4:32927535-32927554 None:intergenic 35.0%
CAATGTAATTATGTCTCGGT+CGG + chr2_4:32927626-32927645 None:intergenic 35.0%
! AAGAGATGGAGTATTATCGT+TGG + chr2_4:32927726-32927745 None:intergenic 35.0%
AAAATGAGGTGGTTTCTCAT+AGG + chr2_4:32927886-32927905 None:intergenic 35.0%
! ATGAGAAACCACCTCATTTT+AGG - chr2_4:32927886-32927905 Msa0325480:intron 35.0%
! GACACTGAAAATTTTGCAAG+TGG - chr2_4:32927923-32927942 Msa0325480:intron 35.0%
!! CAAGTGGTGTTGTAAATTCT+TGG - chr2_4:32927939-32927958 Msa0325480:intron 35.0%
! ATTACGTTACTGCCTTTTTC+AGG + chr2_4:32928115-32928134 None:intergenic 35.0%
! AGGCAGTAACGTAATGATTT+TGG - chr2_4:32928120-32928139 Msa0325480:intron 35.0%
CCACAGAATCAATACAAAGA+TGG + chr2_4:32928205-32928224 None:intergenic 35.0%
!! CCATCTTTGTATTGATTCTG+TGG - chr2_4:32928202-32928221 Msa0325480:intron 35.0%
ATGTTTGAATGTTCAAGTCC+GGG - chr2_4:32928392-32928411 Msa0325480:intron 35.0%
AATGTGTACATCTCTTCCAA+CGG + chr2_4:32928683-32928702 None:intergenic 35.0%
GGATGGATCAATGATAGATT+TGG - chr2_4:32928867-32928886 Msa0325480:intron 35.0%
! GCAGATACCCTCTTTTTAAT+AGG - chr2_4:32928912-32928931 Msa0325480:intron 35.0%
AGTTTCACACACCTTAGTAA+AGG + chr2_4:32929141-32929160 None:intergenic 35.0%
ATGCGACTGTAATATGTCTA+AGG + chr2_4:32929387-32929406 None:intergenic 35.0%
ATCAGTTGAAATGGAGCTTA+AGG - chr2_4:32929705-32929724 Msa0325480:intron 35.0%
GTTAGAAGAGGTTTATATGC+AGG - chr2_4:32929772-32929791 Msa0325480:intron 35.0%
TGTTGATACCGACAAATTGT+TGG + chr2_4:32929816-32929835 None:intergenic 35.0%
! TGTTCTTTTCGATGCAAAAC+CGG + chr2_4:32929875-32929894 None:intergenic 35.0%
!! CTTGCATTGATTAGTTTGAC+CGG - chr2_4:32929985-32930004 Msa0325480:intron 35.0%
TTCGCTTTCACGAAAAGTAA+CGG + chr2_4:32930037-32930056 None:intergenic 35.0%
TACATCATATTCTTCTCACC+TGG - chr2_4:32930435-32930454 Msa0325480:intron 35.0%
ATATTCTTCTCACCTGGAAT+GGG - chr2_4:32930441-32930460 Msa0325480:intron 35.0%
ATTTCAGAGTTAACAACCCA+TGG + chr2_4:32930474-32930493 None:intergenic 35.0%
!! ACTCTGAAATCTATCCATTG+AGG - chr2_4:32930484-32930503 Msa0325480:intron 35.0%
ATCTATCCATTGAGGTATAG+AGG - chr2_4:32930492-32930511 Msa0325480:intron 35.0%
CATATTCCTCTATACCTCAA+TGG + chr2_4:32930501-32930520 None:intergenic 35.0%
TTGAGGTATAGAGGAATATG+CGG - chr2_4:32930501-32930520 Msa0325480:intron 35.0%
AGAAGGATTGTGAAACAACA+AGG + chr2_4:32930560-32930579 None:intergenic 35.0%
AATATCATGAAAGTCCAAGC+AGG + chr2_4:32930606-32930625 None:intergenic 35.0%
! ATTTTTGTGCCAGAGACTAA+AGG - chr2_4:32930663-32930682 Msa0325480:intron 35.0%
! TTTTTGTGCCAGAGACTAAA+GGG - chr2_4:32930664-32930683 Msa0325480:intron 35.0%
! GATTTGTGCAGATCAAGTTT+TGG - chr2_4:32930724-32930743 Msa0325480:intron 35.0%
! TTCTCCCTCTGAGAAATAAT+TGG - chr2_4:32930758-32930777 Msa0325480:intron 35.0%
! CTGACCAATTATTTCTCAGA+GGG + chr2_4:32930765-32930784 None:intergenic 35.0%
! TCTGACCAATTATTTCTCAG+AGG + chr2_4:32930766-32930785 None:intergenic 35.0%
!!! GTTAGTTTTGCGTGTATGTT+TGG - chr2_4:32930863-32930882 Msa0325480:intron 35.0%
TGCGTGTATGTTTGGATTAA+CGG - chr2_4:32930871-32930890 Msa0325480:CDS 35.0%
!! GCAAGACATTGGTTATCTTT+TGG - chr2_4:32930955-32930974 Msa0325480:CDS 35.0%
AAATGGGTCGTATGATTAGT+TGG - chr2_4:32931014-32931033 Msa0325480:five_prime_UTR 35.0%
AATCCTCATGAAATCTGTAG+AGG - chr2_4:32931046-32931065 Msa0325480:five_prime_UTR 35.0%
AATCCTCTACAGATTTCATG+AGG + chr2_4:32931052-32931071 None:intergenic 35.0%
AAAGCAGACATATCTGCTTC+TGG + chr2_4:32925459-32925478 None:intergenic 40.0%
!!! CTTGCTTTTTCTGCTGGAAT+TGG - chr2_4:32925525-32925544 Msa0325480:three_prime_UTR 40.0%
CGTCAGAATTACGATGATTC+TGG - chr2_4:32925829-32925848 Msa0325480:CDS 40.0%
GATAAATGGTGAGTATGTGC+AGG - chr2_4:32926289-32926308 Msa0325480:CDS 40.0%
GTATGTGCAGGAGTTATATC+TGG - chr2_4:32926301-32926320 Msa0325480:CDS 40.0%
ATGAATTCCCAGCAGTAGAA+AGG - chr2_4:32926344-32926363 Msa0325480:CDS 40.0%
ATGTCTTCCTTTCTACTGCT+GGG + chr2_4:32926354-32926373 None:intergenic 40.0%
GTGAAGCAGAGAACATGTAA+GGG + chr2_4:32926484-32926503 None:intergenic 40.0%
TGTGAAGCAGAGAACATGTA+AGG + chr2_4:32926485-32926504 None:intergenic 40.0%
! GTTTTCTATGTAACCCGATC+CGG - chr2_4:32926806-32926825 Msa0325480:intron 40.0%
TTATCCGTTAAATCCGGATC+GGG + chr2_4:32926822-32926841 None:intergenic 40.0%
CTTATCCGTTAAATCCGGAT+CGG + chr2_4:32926823-32926842 None:intergenic 40.0%
GCAAGTTGTATCCCTTCTAT+TGG - chr2_4:32927004-32927023 Msa0325480:intron 40.0%
! ATGTTCGATTGGTCCAATTG+GGG - chr2_4:32927469-32927488 Msa0325480:CDS 40.0%
! TTATCGTTGGCTATGAAGCA+TGG + chr2_4:32927713-32927732 None:intergenic 40.0%
! GCCGGTTCAACTATTCAAAT+TGG + chr2_4:32928331-32928350 None:intergenic 40.0%
ATTAGAGACTCTTCGGTTCA+TGG + chr2_4:32928358-32928377 None:intergenic 40.0%
TCTGAGTTATGGTTCAAACC+CGG + chr2_4:32928413-32928432 None:intergenic 40.0%
ACCTTCATACAAATCTCCGT+TGG - chr2_4:32928664-32928683 Msa0325480:intron 40.0%
TCCAACGGAGATTTGTATGA+AGG + chr2_4:32928668-32928687 None:intergenic 40.0%
AGCAATTGCTGTACTCACTA+TGG + chr2_4:32928820-32928839 None:intergenic 40.0%
ATAGTGAGTACAGCAATTGC+TGG - chr2_4:32928819-32928838 Msa0325480:intron 40.0%
GCAATTGCTGGAGCAATTAT+TGG - chr2_4:32928831-32928850 Msa0325480:intron 40.0%
GCAATTATTGGAGCAGCAAT+TGG - chr2_4:32928843-32928862 Msa0325480:intron 40.0%
ATTATTGGAGCAGCAATTGG+TGG - chr2_4:32928846-32928865 Msa0325480:intron 40.0%
ACAATGAGAGTAGCTGGATT+TGG + chr2_4:32928960-32928979 None:intergenic 40.0%
AATCCAGCTACTCTCATTGT+TGG - chr2_4:32928960-32928979 Msa0325480:intron 40.0%
! GGTAGAGTATTTGTTGGTCT+TGG - chr2_4:32928981-32929000 Msa0325480:intron 40.0%
!! GTATTTGTTGGTCTTGGTGT+CGG - chr2_4:32928987-32929006 Msa0325480:intron 40.0%
!! TATTTGTTGGTCTTGGTGTC+GGG - chr2_4:32928988-32929007 Msa0325480:intron 40.0%
ATCTCCTTTGTATATCTCCG+AGG - chr2_4:32929025-32929044 Msa0325480:intron 40.0%
! CTCAACAGTTTTCTCATCAC+TGG - chr2_4:32929083-32929102 Msa0325480:intron 40.0%
! AACAGTTTTCTCATCACTGG+TGG - chr2_4:32929086-32929105 Msa0325480:intron 40.0%
!! CCAAGTTGATGAGATAGGAA+AGG + chr2_4:32929118-32929137 None:intergenic 40.0%
CCTTTCCTATCTCATCAACT+TGG - chr2_4:32929115-32929134 Msa0325480:intron 40.0%
!! AAAGGCCAAGTTGATGAGAT+AGG + chr2_4:32929123-32929142 None:intergenic 40.0%
! CATCAACTTGGCCTTTACTA+AGG - chr2_4:32929127-32929146 Msa0325480:intron 40.0%
TTGAACATGATTTCTCGCTC+AGG - chr2_4:32929241-32929260 Msa0325480:intron 40.0%
AGCACAATTTGTATCACAGC+AGG + chr2_4:32929308-32929327 None:intergenic 40.0%
AGGATGTTGAACTAACCTTG+CGG + chr2_4:32929367-32929386 None:intergenic 40.0%
CATTTGATCAAGGTCAGATG+AGG + chr2_4:32929470-32929489 None:intergenic 40.0%
CTCATCTGACCTTGATCAAA+TGG - chr2_4:32929468-32929487 Msa0325480:intron 40.0%
CTATCTGGACCATTTGATCA+AGG + chr2_4:32929480-32929499 None:intergenic 40.0%
!! AAGTTGCGTTGATTGATGGT+CGG + chr2_4:32929513-32929532 None:intergenic 40.0%
AACAATGTAACAGGGCAAAG+AGG - chr2_4:32929609-32929628 Msa0325480:intron 40.0%
GAAAAAGATATACGAGGTCG+AGG - chr2_4:32929651-32929670 Msa0325480:intron 40.0%
AGAGGTTTATATGCAGGTTG+TGG - chr2_4:32929778-32929797 Msa0325480:intron 40.0%
CTTCTGTCACTAATCACTTC+TGG - chr2_4:32929901-32929920 Msa0325480:intron 40.0%
ATTTCATTGACAAAACCGGG+AGG - chr2_4:32929956-32929975 Msa0325480:intron 40.0%
CGGTTAAAAGAGTCAAAGAG+AGG + chr2_4:32930017-32930036 None:intergenic 40.0%
AAGCGAAATTCATGCACCAA+TGG - chr2_4:32930050-32930069 Msa0325480:intron 40.0%
CTTTCGATGACACTAACCAT+TGG + chr2_4:32930069-32930088 None:intergenic 40.0%
AGCACAAAATCCACAAGTAG+TGG + chr2_4:32930187-32930206 None:intergenic 40.0%
AAGAGATTTACCATGTCACC+AGG + chr2_4:32930213-32930232 None:intergenic 40.0%
TTCGAGATTAAACATGCACC+TGG + chr2_4:32930315-32930334 None:intergenic 40.0%
CATAGAGCATGGTACACAAA+AGG - chr2_4:32930366-32930385 Msa0325480:intron 40.0%
AAAGGTTGTCCTAGCAACTT+TGG - chr2_4:32930384-32930403 Msa0325480:intron 40.0%
GAATATGATGTAGAGTGCGA+GGG + chr2_4:32930427-32930446 None:intergenic 40.0%
AGAATATGATGTAGAGTGCG+AGG + chr2_4:32930428-32930447 None:intergenic 40.0%
CATATTCTTCTCACCTGGAA+TGG - chr2_4:32930440-32930459 Msa0325480:intron 40.0%
AATAGCATCAACAACGGTGT+GGG - chr2_4:32930527-32930546 Msa0325480:intron 40.0%
ATCCTTCTTGACTTTGACTG+TGG - chr2_4:32930572-32930591 Msa0325480:intron 40.0%
TTGACTTTGACTGTGGCAAT+TGG - chr2_4:32930579-32930598 Msa0325480:intron 40.0%
! TTTTGTGCCAGAGACTAAAG+GGG - chr2_4:32930665-32930684 Msa0325480:intron 40.0%
! CGTATGATTAGTTGGATTGC+TGG - chr2_4:32931022-32931041 Msa0325480:five_prime_UTR 40.0%
CTGTAGAGGATTGTGAAATG+AGG - chr2_4:32931060-32931079 Msa0325480:five_prime_UTR 40.0%
AGAACACACCAACAACAGCA+TGG - chr2_4:32925422-32925441 Msa0325480:three_prime_UTR 45.0%
!!! CTTCGTCTTGCTTTTTCTGC+TGG - chr2_4:32925519-32925538 Msa0325480:three_prime_UTR 45.0%
!! GCTTTTTCTGCTGGAATTGG+TGG - chr2_4:32925528-32925547 Msa0325480:three_prime_UTR 45.0%
!! GGAATTGGTGGCCTTCTTTT+TGG - chr2_4:32925540-32925559 Msa0325480:three_prime_UTR 45.0%
TATGAAGAAACAGAGGAGGG+TGG + chr2_4:32925592-32925611 None:intergenic 45.0%
TCGTAATTCTGACGTAGCGA+TGG + chr2_4:32925823-32925842 None:intergenic 45.0%
CATGTCTTCCTTTCTACTGC+TGG + chr2_4:32926355-32926374 None:intergenic 45.0%
CAGCAGTAGAAAGGAAGACA+TGG - chr2_4:32926353-32926372 Msa0325480:CDS 45.0%
AGAAAGGAAGACATGGCTTC+AGG - chr2_4:32926360-32926379 Msa0325480:CDS 45.0%
GTAACCCGATCCGGATTTAA+CGG - chr2_4:32926815-32926834 Msa0325480:intron 45.0%
! TCCATTGGTTGTTGGTGTTC+AGG + chr2_4:32927520-32927539 None:intergenic 45.0%
TGGCTATGAAGCATGGATAC+AGG + chr2_4:32927706-32927725 None:intergenic 45.0%
GGTGGTTTCTCATAGGTTTC+TGG + chr2_4:32927879-32927898 None:intergenic 45.0%
CTACCAACAATGAGAGTAGC+TGG + chr2_4:32928966-32928985 None:intergenic 45.0%
GAAGCCTCGGAGATATACAA+AGG + chr2_4:32929032-32929051 None:intergenic 45.0%
! AGAGCACCTCTAACTCTAGT+TGG + chr2_4:32929056-32929075 None:intergenic 45.0%
! GTTGATTGATGGTCGGATTG+GGG + chr2_4:32929506-32929525 None:intergenic 45.0%
! CGTTGATTGATGGTCGGATT+GGG + chr2_4:32929507-32929526 None:intergenic 45.0%
CAGTCCTTCCATTGTTCAGT+TGG - chr2_4:32929849-32929868 Msa0325480:intron 45.0%
AAAACCGGCCAACTGAACAA+TGG + chr2_4:32929860-32929879 None:intergenic 45.0%
ACTTCTGGCCTCAATGCAAT+AGG - chr2_4:32929916-32929935 Msa0325480:intron 45.0%
CAATGCAAGTTTCTTCCTCC+CGG + chr2_4:32929974-32929993 None:intergenic 45.0%
AGTCAAAGAGAGGACAACAC+CGG + chr2_4:32930007-32930026 None:intergenic 45.0%
TAGCTGCTGTCTTGAACTCA+GGG + chr2_4:32930119-32930138 None:intergenic 45.0%
ATAGCTGCTGTCTTGAACTC+AGG + chr2_4:32930120-32930139 None:intergenic 45.0%
GATTAAACATGCACCTGGCT+TGG + chr2_4:32930310-32930329 None:intergenic 45.0%
GTTGTCCTAGCAACTTTGGT+TGG - chr2_4:32930388-32930407 Msa0325480:intron 45.0%
TGGAATGGGAACAGTTCCAT+GGG - chr2_4:32930455-32930474 Msa0325480:intron 45.0%
AGGTATAGAGGAATATGCGG+AGG - chr2_4:32930504-32930523 Msa0325480:intron 45.0%
CGGAGGAATAGCATCAACAA+CGG - chr2_4:32930521-32930540 Msa0325480:intron 45.0%
GAATAGCATCAACAACGGTG+TGG - chr2_4:32930526-32930545 Msa0325480:intron 45.0%
TGCCACAGTCAAAGTCAAGA+AGG + chr2_4:32930577-32930596 None:intergenic 45.0%
ATTGGAACCCCTTTAGTCTC+TGG + chr2_4:32930675-32930694 None:intergenic 45.0%
AGAGACTAAAGGGGTTCCAA+TGG - chr2_4:32930674-32930693 Msa0325480:intron 45.0%
ATACTCTCCACTTCCTCCAT+TGG + chr2_4:32930693-32930712 None:intergenic 45.0%
ATCAAAGTGACACCGCAACT+CGG + chr2_4:32930906-32930925 None:intergenic 45.0%
!! GTTGCGGTGTCACTTTGATT+TGG - chr2_4:32930907-32930926 Msa0325480:CDS 45.0%
!!! TATCATTTTTATATTTTTAA+AGG - chr2_4:32926116-32926135 Msa0325480:intron 5.0%
!! TTATTTATATTATTATGTAA+AGG - chr2_4:32926264-32926283 Msa0325480:CDS 5.0%
!! CTTAAATAATATAAAAAAAT+TGG - chr2_4:32926567-32926586 Msa0325480:CDS 5.0%
CACACCAACAACAGCATGGA+AGG - chr2_4:32925426-32925445 Msa0325480:three_prime_UTR 50.0%
ACCAACAACAGCATGGAAGG+AGG - chr2_4:32925429-32925448 Msa0325480:three_prime_UTR 50.0%
ACCTCCTTCCATGCTGTTGT+TGG + chr2_4:32925433-32925452 None:intergenic 50.0%
GCAGAGCAAGCACATGTATC+TGG - chr2_4:32927372-32927391 Msa0325480:CDS 50.0%
! TCGATTGGTCCAATTGGGGA+TGG - chr2_4:32927473-32927492 Msa0325480:CDS 50.0%
TGTTGGGTACCATCCCCAAT+TGG + chr2_4:32927485-32927504 None:intergenic 50.0%
GCCTGAACACCAACAACCAA+TGG - chr2_4:32927516-32927535 Msa0325480:CDS 50.0%
TCTTCGGTTCATGGTTCAGC+CGG + chr2_4:32928349-32928368 None:intergenic 50.0%
ATTTACTGCCAGACGATGCC+CGG - chr2_4:32928700-32928719 Msa0325480:intron 50.0%
! TTAACATTCCGGGCATCGTC+TGG + chr2_4:32928711-32928730 None:intergenic 50.0%
TTGGAGCAGCAATTGGTGGA+TGG - chr2_4:32928850-32928869 Msa0325480:intron 50.0%
AACTCTAGTTGGCGAAGCCT+CGG + chr2_4:32929045-32929064 None:intergenic 50.0%
GCTTCGCCAACTAGAGTTAG+AGG - chr2_4:32929047-32929066 Msa0325480:intron 50.0%
TACAACCAACGAGGTGACTC+GGG + chr2_4:32929344-32929363 None:intergenic 50.0%
GTACAACCAACGAGGTGACT+CGG + chr2_4:32929345-32929364 None:intergenic 50.0%
! GTCGGATTGGGGTTTCTATC+TGG + chr2_4:32929495-32929514 None:intergenic 50.0%
!! GCGTTGATTGATGGTCGGAT+TGG + chr2_4:32929508-32929527 None:intergenic 50.0%
CCTTCCATTGTTCAGTTGGC+CGG - chr2_4:32929853-32929872 Msa0325480:intron 50.0%
!! TGTGGATTTTGTGCTGCTCC+TGG - chr2_4:32930192-32930211 Msa0325480:intron 50.0%
GCGATCCAACCAAAGTTGCT+AGG + chr2_4:32930396-32930415 None:intergenic 50.0%
CATGGAACTGTTCCCATTCC+AGG + chr2_4:32930456-32930475 None:intergenic 50.0%
CTGGAATGGGAACAGTTCCA+TGG - chr2_4:32930454-32930473 Msa0325480:intron 50.0%
GACTAAAGGGGTTCCAATGG+AGG - chr2_4:32930677-32930696 Msa0325480:intron 50.0%
CGGTGAATTTGTCCGAGTTG+CGG - chr2_4:32930891-32930910 Msa0325480:CDS 50.0%
!! TGTTGGTCTTGGTGTCGGGA+TGG - chr2_4:32928992-32929011 Msa0325480:intron 55.0%
! TGGTGTCGGGATGGCTTCAA+TGG - chr2_4:32929001-32929020 Msa0325480:intron 55.0%
TGATTTCTCGCTCAGGCACC+AGG - chr2_4:32929248-32929267 Msa0325480:intron 55.0%
AACATCCACCTCCATGTGCC+TGG + chr2_4:32929269-32929288 None:intergenic 55.0%
GGCACATGGAGGTGGATGTT+AGG - chr2_4:32929269-32929288 Msa0325480:intron 55.0%
! ACCTCGTTGGTTGTACCGCA+AGG - chr2_4:32929349-32929368 Msa0325480:intron 55.0%
ACCTTGCGGTACAACCAACG+AGG + chr2_4:32929353-32929372 None:intergenic 55.0%
CCGGCCAACTGAACAATGGA+AGG + chr2_4:32929856-32929875 None:intergenic 55.0%
AGGGCTGAGTCCACTACTTG+TGG - chr2_4:32930174-32930193 Msa0325480:intron 55.0%
! TTGTGCTGCTCCTGGTGACA+TGG - chr2_4:32930200-32930219 Msa0325480:intron 55.0%
!! GCGGCGTTGATCATAGAGCA+TGG - chr2_4:32930355-32930374 Msa0325480:intron 55.0%
CTGTGGCAATTGGACCTGCT+TGG - chr2_4:32930589-32930608 Msa0325480:intron 55.0%
AGGGGTTCCAATGGAGGAAG+TGG - chr2_4:32930683-32930702 Msa0325480:intron 55.0%
GGTCGGTCGAACACGACACA+AGG + chr2_4:32927609-32927628 None:intergenic 60.0%
CACTTCCCGAGTCACCTCGT+TGG - chr2_4:32929336-32929355 Msa0325480:intron 60.0%
TCGCTCAGGCACCAGGCACA+TGG - chr2_4:32929255-32929274 Msa0325480:intron 65.0%
CTCAGGCACCAGGCACATGG+AGG - chr2_4:32929258-32929277 Msa0325480:intron 65.0%
AGGCACCAGGCACATGGAGG+TGG - chr2_4:32929261-32929280 Msa0325480:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 32925299 32931138 32925299 ID=Msa0325480;Name=Msa0325480
chr2_4 mRNA 32925299 32931138 32925299 ID=Msa0325480-mRNA-1;Parent=Msa0325480;Name=Msa0325480-mRNA-1;_AED=0.09;_eAED=0.09;_QI=142|1|1|1|1|1|6|362|572
chr2_4 exon 32925299 32926131 32925299 ID=Msa0325480-mRNA-1:exon:10695;Parent=Msa0325480-mRNA-1
chr2_4 exon 32926216 32926815 32926216 ID=Msa0325480-mRNA-1:exon:10694;Parent=Msa0325480-mRNA-1
chr2_4 exon 32927067 32927174 32927067 ID=Msa0325480-mRNA-1:exon:10693;Parent=Msa0325480-mRNA-1
chr2_4 exon 32927289 32927624 32927289 ID=Msa0325480-mRNA-1:exon:10692;Parent=Msa0325480-mRNA-1
chr2_4 exon 32930056 32930126 32930056 ID=Msa0325480-mRNA-1:exon:10691;Parent=Msa0325480-mRNA-1
chr2_4 exon 32930864 32931138 32930864 ID=Msa0325480-mRNA-1:exon:10690;Parent=Msa0325480-mRNA-1
chr2_4 five_prime_UTR 32930997 32931138 32930997 ID=Msa0325480-mRNA-1:five_prime_utr;Parent=Msa0325480-mRNA-1
chr2_4 CDS 32930864 32930996 32930864 ID=Msa0325480-mRNA-1:cds;Parent=Msa0325480-mRNA-1
chr2_4 CDS 32930056 32930126 32930056 ID=Msa0325480-mRNA-1:cds;Parent=Msa0325480-mRNA-1
chr2_4 CDS 32927289 32927624 32927289 ID=Msa0325480-mRNA-1:cds;Parent=Msa0325480-mRNA-1
chr2_4 CDS 32927067 32927174 32927067 ID=Msa0325480-mRNA-1:cds;Parent=Msa0325480-mRNA-1
chr2_4 CDS 32926216 32926815 32926216 ID=Msa0325480-mRNA-1:cds;Parent=Msa0325480-mRNA-1
chr2_4 CDS 32925661 32926131 32925661 ID=Msa0325480-mRNA-1:cds;Parent=Msa0325480-mRNA-1
chr2_4 three_prime_UTR 32925299 32925660 32925299 ID=Msa0325480-mRNA-1:three_prime_utr;Parent=Msa0325480-mRNA-1
Gene Sequence

>Msa0325480

ATGGAAGGAGGTGTACCAGAAGCAGATATGTCTGCTTTCAGAGAATGTTTATCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTTTCTGCTGGAATTGGTGGCCTTCTTTTTGGCTATGATACTGGAGTTATATCTGGAGCTCTTTTGTATATAAGAGATGAATTCCCAGCAGTAGAAAGGAAGACATGGCTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATTATTGGAGCAGCAATTGGTGGATGGATCAATGATAGATTTGGAAGAAAAGTATCAATAATTGTTGCAGATACCCTCTTTTTAATAGGGTCAATTATCTTGGCTGCTGCTCCAAATCCAGCTACTCTCATTGTTGGTAGAGTATTTGTTGGTCTTGGTGTCGGGATGGCTTCAATGGCATCTCCTTTGTATATCTCCGAGGCTTCGCCAACTAGAGTTAGAGGTGCTCTTGTTAGTCTCAACAGTTTTCTCATCACTGGTGGACAGTTCCTTTCCTATCTCATCAACTTGGCCTTTACTAAGGCACCAGGCACATGGAGGTGGATGTTAGGAGTTGCAGCAGCACCTGCTGTGATACAAATTGTGCTCATGTTGTCACTTCCCGAGTCACCTCGTTGGTTGTACCGCAAGGGCAAAGAGGAAGAAGCAAAAGTAATTCTGAAAAAGATATACGAGGTCGAGGACTATGACAATGAGATTCAAGCATTGAAAGAATCAGTTGAAATGGAGCTTAAGGAAACAGAAAAAATCAGCATAATGCAGCTTCTAAAAACAACATCTGTTAGAAGAGGTTTATATGCAGGTTGTGGACTTGCATTTTTCCAACAATTTGTCGGTATCAACACTGTGATGTACTACAGTCCTTCCATTGTTCAGTTGGCCGGTTTTGCATCGAAAAGAACAGCACTTCTTCTGTCACTAATCACTTCTGGCCTCAATGCAATAGGTTCAATTTTGAGCATATATTTCATTGACAAAACCGGGAGGAAGAAACTTGCATTGATTAGTTTGACCGGTGTTGTCCTCTCTTTGACTCTTTTAACCGTTACTTTTCGTGAAAGCGAAATTCATGCACCAATGGTTAGTGTCATCGAAAGCTCTCATTTCAATAACACTAACACATGCCCTGAGTTCAAGACAGCAGCTATGAACAATCATAATTGGAATTGTATGAAGTGTATAAGGGCTGAGTCCACTACTTGTGGATTTTGTGCTGCTCCTGGTGACATGACCAAGCCAGGTGCATGTTTAATCTCGAATAAAAATACAGAAGATATTTGCGGCGTTGATCATAGAGCATGGTACACAAAAGGTTGTCCTAGCAACTTTGGTTGGATCGCTATAATAGCCCTCGCACTCTACATCATATTCTTCTCACCTGGAATGGGAACAGTTCCATGGGTTGTTAACTCTGAAATCTATCCATTGAGGTATAGAGGAATATGCGGAGGAATAGCATCAACAACGGTGTGGGTTTCTAACCTTGTTGTTTCACAATCCTTCTTGACTTTGACTGTGGCAATTGGACCTGCTTGGACTTTCATGATATTTGCAATCATTGCTATTGTTGCCATTTTCTTTGTCATCATTTTTGTGCCAGAGACTAAAGGGGTTCCAATGGAGGAAGTGGAGAGTATGCTTGAAAAGAGATTTGTGCAGATCAAGTTTTGGAAGAAGAGAGATTCTCCCTCTGAGAAATAA
Protein sequence

>Msa0325480

MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFPAVERKTWLQEAIVSTAIAGAIIGAAIGGWINDRFGRKVSIIVADTLFLIGSIILAAAPNPATLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAAPAVIQIVLMLSLPESPRWLYRKGKEEEAKVILKKIYEVEDYDNEIQALKESVEMELKETEKISIMQLLKTTSVRRGLYAGCGLAFFQQFVGINTVMYYSPSIVQLAGFASKRTALLLSLITSGLNAIGSILSIYFIDKTGRKKLALISLTGVVLSLTLLTVTFRESEIHAPMVSVIESSHFNNTNTCPEFKTAAMNNHNWNCMKCIRAESTTCGFCAAPGDMTKPGACLISNKNTEDICGVDHRAWYTKGCPSNFGWIAIIALALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTTVWVSNLVVSQSFLTLTVAIGPAWTFMIFAIIAIVAIFFVIIFVPETKGVPMEEVESMLEKRFVQIKFWKKRDSPSEK*