AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1428400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428400 MtrunA17_Chr2g0303701 97.378 572 12 2 1 572 1 569 0.0 1129
Msa1428400 MtrunA17_Chr2g0303731 74.826 576 136 6 1 572 1 571 0.0 884
Msa1428400 MtrunA17_Chr8g0376631 74.913 574 137 4 1 571 1 570 0.0 845
Msa1428400 MtrunA17_Chr8g0376601 71.350 548 149 5 1 545 1 543 0.0 776
Msa1428400 MtrunA17_Chr8g0376611 74.200 500 120 4 70 566 3 496 0.0 747
Msa1428400 MtrunA17_Chr2g0290181 58.201 567 227 4 2 562 3 565 0.0 649
Msa1428400 MtrunA17_Chr2g0290161 50.996 502 210 6 67 562 1 472 8.01e-162 470
Msa1428400 MtrunA17_Chr7g0214451 56.338 355 147 1 6 360 21 367 3.14e-131 392
Msa1428400 MtrunA17_Chr7g0214451 56.667 120 50 1 439 556 363 482 2.50e-38 147
Msa1428400 MtrunA17_Chr1g0213611 57.386 352 142 1 6 357 66 409 1.04e-129 390
Msa1428400 MtrunA17_Chr1g0213611 56.481 108 47 0 449 556 424 531 5.26e-36 141
Msa1428400 MtrunA17_Chr5g0434261 53.740 361 108 7 188 545 1 305 1.63e-123 366
Msa1428400 MtrunA17_Chr1g0213631 55.911 313 138 0 45 357 4 316 4.01e-112 342
Msa1428400 MtrunA17_Chr1g0213631 55.172 116 51 1 442 556 320 435 7.26e-36 140
Msa1428400 MtrunA17_Chr5g0434251 71.622 148 42 0 419 566 5 152 6.54e-78 243
Msa1428400 MtrunA17_Chr6g0450271 67.857 196 54 4 223 415 32 221 1.37e-74 238
Msa1428400 MtrunA17_Chr5g0434231 68.208 173 31 1 70 242 6 154 9.60e-73 229
Msa1428400 MtrunA17_Chr6g0450291 68.421 171 45 4 248 415 1 165 9.71e-64 207
Msa1428400 MtrunA17_Chr6g0450281 68.421 171 45 4 248 415 1 165 2.33e-63 206
Msa1428400 MtrunA17_Chr6g0450241 67.836 171 46 4 248 415 1 165 8.49e-63 204
Msa1428400 MtrunA17_Chr2g0282031 36.747 332 201 3 25 350 52 380 1.44e-57 201
Msa1428400 MtrunA17_Chr2g0282031 40.385 104 62 0 452 555 399 502 6.69e-15 77.4
Msa1428400 MtrunA17_Chr7g0250881 36.923 325 198 3 33 357 72 389 8.10e-56 196
Msa1428400 MtrunA17_Chr4g0036021 33.051 354 213 6 22 357 23 370 6.98e-55 194
Msa1428400 MtrunA17_Chr4g0036021 38.596 114 64 1 452 565 386 493 3.01e-12 69.3
Msa1428400 MtrunA17_Chr6g0457781 36.923 325 198 3 33 357 112 429 1.02e-54 194
Msa1428400 MtrunA17_Chr6g0485661 33.994 353 221 5 7 350 37 386 1.48e-51 184
Msa1428400 MtrunA17_Chr4g0034681 33.426 359 206 8 22 357 26 374 8.03e-51 182
Msa1428400 MtrunA17_Chr4g0034681 33.929 112 68 1 460 571 398 503 5.86e-11 65.1
Msa1428400 MtrunA17_Chr3g0121674 49.701 167 84 0 188 354 1 167 1.80e-50 176
Msa1428400 MtrunA17_Chr3g0121674 53.982 113 50 1 446 556 177 289 9.64e-37 139
Msa1428400 MtrunA17_Chr3g0144361 32.597 362 215 6 20 357 18 374 4.89e-50 180
Msa1428400 MtrunA17_Chr5g0432581 34.903 361 211 8 23 364 16 371 2.35e-49 178
Msa1428400 MtrunA17_Chr5g0432581 37.383 107 63 2 452 556 381 485 8.08e-13 70.9
Msa1428400 MtrunA17_Chr5g0394341 34.513 339 194 7 24 340 20 352 4.90e-49 177
Msa1428400 MtrunA17_Chr8g0373531 34.783 345 202 7 23 348 16 356 5.47e-48 174
Msa1428400 MtrunA17_Chr8g0373531 37.143 105 66 0 452 556 381 485 3.80e-14 75.1
Msa1428400 MtrunA17_Chr1g0164871 33.433 335 201 6 24 340 21 351 6.40e-48 174
Msa1428400 MtrunA17_Chr5g0437021 33.134 335 202 5 24 340 21 351 8.43e-48 174
Msa1428400 MtrunA17_Chr1g0164851 33.333 336 202 6 23 340 20 351 8.97e-48 174
Msa1428400 MtrunA17_Chr4g0021771 34.286 350 218 6 25 367 54 398 1.01e-47 174
Msa1428400 MtrunA17_Chr4g0021771 39.815 108 60 1 454 556 398 505 5.81e-15 77.8
Msa1428400 MtrunA17_Chr8g0390141 33.724 341 202 7 21 340 18 355 4.56e-47 172
Msa1428400 MtrunA17_Chr5g0434241 80.198 101 17 1 248 345 1 101 8.47e-47 159
Msa1428400 MtrunA17_Chr8g0390521 34.024 338 209 5 23 350 15 348 2.72e-46 170
Msa1428400 MtrunA17_Chr1g0205671 31.965 341 201 8 23 340 20 352 6.17e-46 169
Msa1428400 MtrunA17_Chr4g0048411 33.828 337 198 6 24 340 21 352 8.28e-46 169
Msa1428400 MtrunA17_Chr4g0032021 33.148 359 215 8 20 358 92 445 1.05e-45 169
Msa1428400 MtrunA17_Chr4g0032021 39.423 104 63 0 452 555 453 556 1.77e-14 76.3
Msa1428400 MtrunA17_Chr4g0048051 34.320 338 195 7 24 340 21 352 1.07e-45 168
Msa1428400 MtrunA17_Chr1g0205681 33.133 332 190 8 33 340 30 353 5.96e-45 166
Msa1428400 MtrunA17_Chr4g0065311 32.865 356 211 9 1 338 1 346 1.34e-44 165
Msa1428400 MtrunA17_Chr4g0039651 32.836 335 205 7 36 353 55 386 1.50e-44 165
Msa1428400 MtrunA17_Chr4g0039651 34.286 105 69 0 447 551 394 498 1.67e-11 66.6
Msa1428400 MtrunA17_Chr5g0417611 31.548 336 206 7 23 338 20 351 3.93e-43 161
Msa1428400 MtrunA17_Chr1g0205691 33.140 344 204 8 33 355 29 367 5.73e-43 161
Msa1428400 MtrunA17_Chr5g0445601 32.132 333 205 7 23 338 24 352 4.41e-42 158
Msa1428400 MtrunA17_Chr7g0257631 32.326 331 203 6 25 338 60 386 1.97e-41 157
Msa1428400 MtrunA17_Chr5g0420841 31.487 343 211 7 33 355 28 366 2.86e-41 156
Msa1428400 MtrunA17_Chr8g0390261 32.515 326 195 8 35 340 35 355 7.00e-41 155
Msa1428400 MtrunA17_Chr4g0065324 32.817 323 196 7 33 338 36 354 1.01e-39 151
Msa1428400 MtrunA17_Chr3g0085971 32.024 331 195 7 33 340 28 351 3.03e-39 150
Msa1428400 MtrunA17_Chr6g0486681 31.737 334 207 7 35 350 35 365 5.38e-39 149
Msa1428400 MtrunA17_Chr6g0486671 31.737 334 207 7 35 350 35 365 5.38e-39 149
Msa1428400 MtrunA17_Chr3g0128081 31.343 335 206 7 26 340 22 352 5.48e-39 149
Msa1428400 MtrunA17_Chr5g0403831 30.362 359 226 5 16 355 21 374 8.09e-39 149
Msa1428400 MtrunA17_Chr3g0119401 30.931 333 215 5 24 353 95 415 1.52e-37 145
Msa1428400 MtrunA17_Chr3g0115721 30.194 361 224 9 37 379 34 384 1.60e-36 142
Msa1428400 MtrunA17_Chr3g0115711 30.368 326 198 6 37 341 34 351 1.73e-36 142
Msa1428400 MtrunA17_Chr6g0486021 31.085 341 221 6 14 352 40 368 1.80e-36 142
Msa1428400 MtrunA17_Chr5g0407441 35.426 223 141 3 26 246 4 225 4.54e-36 143
Msa1428400 MtrunA17_Chr5g0407441 35.417 96 62 0 452 547 608 703 5.42e-11 65.5
Msa1428400 MtrunA17_Chr3g0144261 35.455 220 137 3 29 246 7 223 1.97e-35 141
Msa1428400 MtrunA17_Chr3g0144261 35.417 96 62 0 452 547 616 711 7.36e-14 74.7
Msa1428400 MtrunA17_Chr3g0115741 28.446 341 214 8 37 356 37 368 2.69e-35 139
Msa1428400 MtrunA17_Chr1g0155221 33.096 281 177 5 78 357 98 368 4.62e-35 138
Msa1428400 MtrunA17_Chr1g0155221 30.645 124 74 3 438 554 371 489 2.04e-11 66.6
Msa1428400 MtrunA17_Chr8g0376621 86.765 68 9 0 1 68 1 68 5.03e-35 126
Msa1428400 MtrunA17_Chr3g0128171 32.090 268 176 4 73 338 40 303 6.88e-35 137
Msa1428400 MtrunA17_Chr3g0115751 30.341 323 205 6 33 338 35 354 2.55e-34 136
Msa1428400 MtrunA17_Chr3g0078991 29.882 338 212 7 25 341 22 355 2.61e-34 136
Msa1428400 MtrunA17_Chr7g0273281 29.655 290 186 6 78 363 111 386 5.35e-34 135
Msa1428400 MtrunA17_Chr7g0273281 32.381 105 70 1 452 556 395 498 2.70e-11 66.2
Msa1428400 MtrunA17_Chr5g0434221 85.294 68 10 0 1 68 1 68 5.56e-34 123
Msa1428400 MtrunA17_Chr3g0115781 31.065 338 209 8 37 356 36 367 9.11e-34 134
Msa1428400 MtrunA17_Chr3g0146061 37.850 214 128 4 36 246 14 225 1.13e-33 136
Msa1428400 MtrunA17_Chr3g0146061 35.417 96 62 0 452 547 626 721 1.84e-13 73.6
Msa1428400 MtrunA17_Chr3g0078971 31.268 339 203 9 23 338 20 351 4.69e-33 132
Msa1428400 MtrunA17_Chr4g0004821 29.464 336 227 5 21 356 33 358 7.67e-33 131
Msa1428400 MtrunA17_Chr2g0286721 30.851 282 182 6 78 357 98 368 8.60e-33 131
Msa1428400 MtrunA17_Chr2g0286721 30.189 159 106 3 399 554 328 484 6.87e-12 67.8
Msa1428400 MtrunA17_Chr8g0370141 33.333 225 145 4 26 247 4 226 1.61e-32 129
Msa1428400 MtrunA17_Chr7g0259471 30.088 339 215 7 24 357 37 358 1.63e-32 130
Msa1428400 MtrunA17_Chr7g0259471 37.383 107 58 2 452 554 373 474 4.82e-13 71.6
Msa1428400 MtrunA17_Chr8g0373181 32.180 289 169 6 78 357 96 366 7.01e-32 129
Msa1428400 MtrunA17_Chr8g0373181 35.238 105 65 2 447 550 380 482 9.04e-12 67.8
Msa1428400 MtrunA17_Chr7g0259221 30.282 284 180 5 78 357 91 360 1.68e-30 124
Msa1428400 MtrunA17_Chr7g0259221 35.922 103 65 1 452 554 375 476 1.02e-12 70.5
Msa1428400 MtrunA17_Chr4g0066581 28.470 281 190 5 78 357 101 371 2.85e-30 124
Msa1428400 MtrunA17_Chr4g0066581 36.893 103 64 1 452 554 386 487 1.10e-12 70.5
Msa1428400 MtrunA17_Chr5g0419321 35.176 199 126 3 48 244 54 251 2.42e-29 123
Msa1428400 MtrunA17_Chr3g0078791 30.800 250 147 4 93 340 52 277 1.34e-26 112
Msa1428400 MtrunA17_Chr8g0373191 31.164 292 158 8 73 357 83 338 3.05e-26 112
Msa1428400 MtrunA17_Chr3g0115731 28.108 370 199 13 37 379 34 363 3.36e-23 103
Msa1428400 MtrunA17_Chr5g0404191 34.659 176 109 2 73 247 94 264 1.33e-21 95.5
Msa1428400 MtrunA17_Chr2g0290171 62.687 67 22 1 2 68 3 66 1.62e-20 85.9
Msa1428400 MtrunA17_Chr4g0065351 29.688 192 130 4 148 338 2 189 3.99e-18 86.3
Msa1428400 MtrunA17_Chr7g0273271 32.353 136 87 2 78 213 76 206 2.35e-16 78.2
Msa1428400 MtrunA17_Chr7g0273261 35.338 133 84 2 423 554 107 238 2.67e-14 73.2
Msa1428400 MtrunA17_Chr5g0404181 35.238 105 65 2 447 550 26 128 7.18e-14 68.9
Msa1428400 MtrunA17_Chr4g0065341 33.333 129 70 3 25 137 26 154 1.01e-11 63.9
Msa1428400 MtrunA17_Chr8g0370151 33.333 120 70 1 452 571 247 356 1.12e-11 66.6
Msa1428400 MtrunA17_Chr2g0319001 25.862 290 171 11 77 340 132 403 1.47e-11 67.0
Msa1428400 MtrunA17_Chr5g0446681 31.788 151 84 4 33 183 29 160 3.12e-11 64.7
Msa1428400 MtrunA17_Chr8g0356471 26.007 273 179 8 73 336 132 390 3.23e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1428400 AT1G30220.1 67.418 577 181 4 1 572 1 575 0.0 803
Msa1428400 AT4G16480.2 58.201 567 223 5 1 557 2 564 0.0 650
Msa1428400 AT4G16480.3 58.201 567 223 5 1 557 2 564 0.0 650
Msa1428400 AT4G16480.1 58.201 567 223 5 1 557 2 564 0.0 650
Msa1428400 AT2G35740.1 56.169 543 226 4 24 557 24 563 0.0 631
Msa1428400 AT2G43330.1 55.742 357 149 2 6 361 19 367 5.67e-123 372
Msa1428400 AT2G43330.1 58.333 108 45 0 449 556 375 482 1.80e-37 145
Msa1428400 AT4G36670.1 34.770 348 207 5 23 353 14 358 4.73e-55 194
Msa1428400 AT4G36670.1 38.462 104 64 0 452 555 378 481 1.28e-14 77.0
Msa1428400 AT3G18830.1 33.616 354 205 6 22 353 32 377 3.07e-52 187
Msa1428400 AT3G19940.1 34.627 335 195 6 25 340 24 353 4.61e-51 183
Msa1428400 AT1G07340.1 33.951 324 195 5 33 340 30 350 4.65e-51 183
Msa1428400 AT1G50310.1 33.234 334 202 5 25 340 24 354 6.16e-51 183
Msa1428400 AT2G20780.1 34.402 343 216 5 20 357 49 387 1.82e-50 182
Msa1428400 AT2G20780.1 35.922 103 66 0 452 554 399 501 4.49e-14 75.5
Msa1428400 AT2G18480.1 35.393 356 204 8 23 356 15 366 3.25e-50 181
Msa1428400 AT2G18480.1 40.196 102 61 0 452 553 382 483 6.43e-16 81.3
Msa1428400 AT5G16150.2 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa1428400 AT5G16150.1 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa1428400 AT5G16150.3 36.859 312 190 3 35 346 114 418 3.96e-49 179
Msa1428400 AT3G05960.1 33.333 357 208 9 5 342 5 350 1.12e-48 177
Msa1428400 AT2G16120.1 32.092 349 217 4 22 353 22 367 3.27e-47 173
Msa1428400 AT5G26250.1 33.631 336 200 8 25 342 21 351 4.64e-47 172
Msa1428400 AT5G59250.1 32.884 371 224 9 8 358 82 447 7.82e-47 173
Msa1428400 AT5G59250.1 39.815 108 65 0 448 555 451 558 2.35e-14 76.3
Msa1428400 AT2G16130.1 32.277 347 211 5 28 353 24 367 7.84e-46 169
Msa1428400 AT2G16130.1 33.333 102 68 0 452 553 388 489 8.97e-12 68.2
Msa1428400 AT1G11260.1 32.653 343 196 7 23 340 20 352 2.79e-45 168
Msa1428400 AT5G23270.1 33.432 338 197 7 25 340 23 354 1.59e-43 162
Msa1428400 AT5G26340.1 32.544 338 202 7 24 340 21 353 7.57e-43 161
Msa1428400 AT5G17010.1 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa1428400 AT5G17010.3 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa1428400 AT5G17010.4 32.938 337 204 8 35 353 56 388 3.69e-42 159
Msa1428400 AT1G05030.1 33.333 324 204 5 33 353 86 400 1.76e-41 157
Msa1428400 AT3G19930.1 31.343 335 208 5 24 340 21 351 3.27e-41 156
Msa1428400 AT3G19930.2 31.343 335 208 5 24 340 21 351 3.27e-41 156
Msa1428400 AT1G77210.2 29.972 357 222 6 2 340 9 355 3.71e-41 156
Msa1428400 AT1G77210.1 29.972 357 222 6 2 340 9 355 3.71e-41 156
Msa1428400 AT2G20780.2 32.934 334 210 7 31 357 3 329 4.49e-40 152
Msa1428400 AT2G20780.2 38.298 94 58 0 461 554 350 443 9.33e-14 74.3
Msa1428400 AT4G21480.1 32.537 335 201 6 25 340 22 350 4.74e-40 153
Msa1428400 AT3G03090.1 30.448 335 215 5 35 353 56 388 1.74e-39 151
Msa1428400 AT3G03090.1 34.615 104 68 0 448 551 397 500 3.74e-11 66.2
Msa1428400 AT3G51490.1 35.714 224 139 4 26 246 4 225 6.01e-38 149
Msa1428400 AT3G51490.1 37.500 96 60 0 452 547 611 706 6.67e-13 72.0
Msa1428400 AT3G51490.2 35.714 224 139 4 26 246 4 225 6.97e-38 149
Msa1428400 AT3G51490.2 37.500 96 60 0 452 547 619 714 6.22e-13 72.4
Msa1428400 AT4G02050.2 30.931 333 205 8 25 338 26 352 1.23e-37 146
Msa1428400 AT4G02050.1 30.931 333 205 8 25 338 26 352 1.23e-37 146
Msa1428400 AT1G05030.2 32.797 311 197 5 46 353 47 348 2.19e-37 145
Msa1428400 AT2G48020.4 30.769 338 218 7 22 357 23 346 3.71e-35 136
Msa1428400 AT2G48020.2 30.769 338 218 7 22 357 23 346 8.78e-35 137
Msa1428400 AT2G48020.2 39.806 103 61 1 452 554 361 462 1.97e-15 79.3
Msa1428400 AT2G48020.1 30.769 338 218 7 22 357 23 346 8.78e-35 137
Msa1428400 AT2G48020.1 39.806 103 61 1 452 554 361 462 1.97e-15 79.3
Msa1428400 AT1G20840.2 34.649 228 142 4 29 253 7 230 9.41e-35 140
Msa1428400 AT1G20840.2 38.462 91 56 0 457 547 623 713 8.64e-14 75.1
Msa1428400 AT1G20840.1 34.649 228 142 4 29 253 7 230 9.41e-35 140
Msa1428400 AT1G20840.1 38.462 91 56 0 457 547 623 713 8.64e-14 75.1
Msa1428400 AT1G34580.1 30.530 321 202 5 37 338 35 353 1.88e-34 137
Msa1428400 AT5G61520.1 27.368 380 249 6 7 363 5 380 2.43e-34 137
Msa1428400 AT1G67300.2 28.371 356 239 6 4 355 31 374 2.50e-34 136
Msa1428400 AT5G18840.1 32.509 283 176 6 78 357 93 363 2.97e-34 136
Msa1428400 AT5G18840.1 33.071 127 81 2 433 556 356 481 3.91e-12 69.3
Msa1428400 AT1G54730.3 31.673 281 180 6 78 357 81 350 3.14e-34 135
Msa1428400 AT1G79820.4 28.324 346 234 6 14 357 44 377 3.34e-34 135
Msa1428400 AT1G54730.2 31.673 281 180 6 78 357 81 350 5.20e-34 135
Msa1428400 AT1G54730.9 31.673 281 180 6 78 357 81 350 5.30e-34 134
Msa1428400 AT1G54730.7 31.673 281 180 6 78 357 81 350 5.30e-34 134
Msa1428400 AT1G67300.4 27.762 353 239 6 4 352 31 371 6.95e-34 134
Msa1428400 AT1G67300.5 27.762 353 239 6 4 352 31 371 6.95e-34 134
Msa1428400 AT1G67300.6 27.762 353 239 6 4 352 31 371 9.13e-34 134
Msa1428400 AT1G67300.7 27.762 353 239 6 4 352 31 371 9.13e-34 134
Msa1428400 AT1G79820.2 28.613 346 233 6 14 357 44 377 1.09e-33 134
Msa1428400 AT1G79820.1 28.613 346 233 6 14 357 44 377 1.09e-33 134
Msa1428400 AT1G67300.1 27.762 353 239 6 4 352 31 371 1.37e-33 134
Msa1428400 AT1G67300.3 27.762 353 239 6 4 352 31 371 1.37e-33 134
Msa1428400 AT4G35300.9 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa1428400 AT4G35300.9 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa1428400 AT4G35300.2 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa1428400 AT4G35300.2 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa1428400 AT4G35300.3 37.559 213 130 3 36 246 14 225 1.53e-33 136
Msa1428400 AT4G35300.3 40.625 96 57 0 452 547 615 710 1.78e-15 80.5
Msa1428400 AT4G35300.4 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.4 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT4G35300.8 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.8 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT4G35300.6 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.6 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT4G35300.11 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.11 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT4G35300.1 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.1 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT4G35300.10 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.10 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT4G35300.7 37.559 213 130 3 36 246 14 225 1.93e-33 136
Msa1428400 AT4G35300.7 40.625 96 57 0 452 547 625 720 1.81e-15 80.5
Msa1428400 AT3G05155.1 30.114 352 220 6 78 428 76 402 2.13e-33 133
Msa1428400 AT3G05155.1 33.333 99 65 1 452 550 358 455 9.84e-13 70.9
Msa1428400 AT1G75220.1 31.834 289 186 5 78 365 97 375 4.55e-33 132
Msa1428400 AT1G75220.1 31.193 109 71 2 449 554 380 487 1.43e-11 67.4
Msa1428400 AT3G05400.1 31.849 292 185 6 73 362 70 349 1.11e-32 131
Msa1428400 AT3G05155.2 32.830 265 163 5 78 341 76 326 2.77e-32 127
Msa1428400 AT1G19450.1 31.333 300 190 5 78 376 98 382 2.82e-32 130
Msa1428400 AT3G05150.2 32.384 281 179 5 78 357 84 354 3.68e-32 130
Msa1428400 AT3G05150.2 38.095 105 64 1 452 556 369 472 2.35e-15 79.3
Msa1428400 AT3G05150.1 32.384 281 179 5 78 357 84 354 3.75e-32 129
Msa1428400 AT3G05150.1 38.235 102 62 1 452 553 369 469 3.05e-15 79.0
Msa1428400 AT3G05150.3 32.384 281 179 5 78 357 84 354 3.75e-32 129
Msa1428400 AT3G05150.3 38.235 102 62 1 452 553 369 469 3.05e-15 79.0
Msa1428400 AT2G48020.3 30.341 323 209 7 22 342 23 331 4.19e-32 127
Msa1428400 AT1G54730.11 31.321 265 170 6 78 341 81 334 9.29e-32 126
Msa1428400 AT1G08930.1 30.769 286 176 8 78 357 107 376 2.64e-31 127
Msa1428400 AT1G08930.2 30.769 286 176 8 78 357 107 376 2.64e-31 127
Msa1428400 AT5G27360.4 31.118 331 207 6 31 357 40 353 2.85e-31 126
Msa1428400 AT5G27360.3 30.564 337 213 6 31 363 88 407 3.13e-31 127
Msa1428400 AT5G27360.3 33.333 99 65 1 455 553 419 516 4.23e-11 65.9
Msa1428400 AT5G27360.1 30.564 337 213 6 31 363 40 359 6.35e-31 126
Msa1428400 AT5G27360.1 33.333 99 65 1 455 553 371 468 4.33e-11 65.9
Msa1428400 AT1G34580.2 29.801 302 194 4 53 338 4 303 7.67e-31 125
Msa1428400 AT5G61520.2 28.859 298 207 4 67 363 39 332 2.18e-30 124
Msa1428400 AT1G50310.2 33.990 203 130 3 139 340 12 211 2.37e-30 122
Msa1428400 AT3G05165.3 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa1428400 AT3G05165.2 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa1428400 AT3G05165.1 29.021 286 193 3 78 363 79 354 2.28e-29 121
Msa1428400 AT5G27350.1 30.435 345 222 5 31 370 36 367 2.68e-29 121
Msa1428400 AT3G05165.4 29.021 286 193 3 78 363 79 354 3.08e-29 121
Msa1428400 AT3G05165.5 29.021 286 193 3 78 363 79 354 3.08e-29 121
Msa1428400 AT3G05165.6 29.021 286 193 3 78 363 79 354 4.57e-29 121
Msa1428400 AT3G05160.1 29.655 290 186 5 78 363 70 345 4.58e-29 120
Msa1428400 AT3G05160.1 34.343 99 64 1 455 553 357 454 6.97e-11 65.1
Msa1428400 AT3G05160.3 29.655 290 186 5 78 363 21 296 5.66e-29 119
Msa1428400 AT3G05160.3 34.343 99 64 1 455 553 308 405 9.70e-11 64.3
Msa1428400 AT3G05160.2 29.655 290 186 5 78 363 21 296 5.66e-29 119
Msa1428400 AT3G05160.2 34.343 99 64 1 455 553 308 405 9.70e-11 64.3
Msa1428400 AT1G54730.10 32.751 229 146 5 78 305 81 302 8.40e-29 117
Msa1428400 AT1G54730.6 32.751 229 146 5 78 305 81 302 8.40e-29 117
Msa1428400 AT1G54730.4 30.824 279 177 8 78 348 81 351 9.02e-29 119
Msa1428400 AT1G54730.5 30.824 279 177 8 78 348 81 351 1.44e-28 119
Msa1428400 AT1G54730.5 31.933 119 80 1 432 550 324 441 1.52e-13 73.6
Msa1428400 AT1G54730.8 30.824 279 177 8 78 348 81 351 1.51e-28 118
Msa1428400 AT3G05400.2 30.822 292 168 7 73 362 70 329 1.97e-28 118
Msa1428400 AT5G17010.2 31.618 272 160 8 35 284 53 320 7.48e-28 117
Msa1428400 AT3G51490.3 35.429 175 109 3 75 246 2 175 9.08e-28 118
Msa1428400 AT3G51490.3 37.500 96 60 0 452 547 569 664 6.09e-13 72.0
Msa1428400 AT1G08920.1 31.502 273 169 7 78 346 81 339 1.72e-27 116
Msa1428400 AT1G08920.3 31.502 273 169 7 78 346 81 339 1.90e-27 115
Msa1428400 AT1G08920.2 31.227 269 167 7 78 342 81 335 5.69e-27 114
Msa1428400 AT1G08890.1 31.317 281 181 4 78 357 76 345 7.84e-27 114
Msa1428400 AT5G27360.2 31.086 267 166 5 101 363 3 255 1.27e-26 112
Msa1428400 AT5G27360.2 32.353 102 68 1 455 556 267 367 5.20e-11 65.1
Msa1428400 AT5G27360.5 31.086 267 166 5 101 363 3 255 1.27e-26 112
Msa1428400 AT5G27360.5 32.353 102 68 1 455 556 267 367 5.20e-11 65.1
Msa1428400 AT1G08900.4 30.882 272 176 5 78 348 74 334 2.71e-26 112
Msa1428400 AT1G08900.5 29.964 277 182 5 73 348 27 292 4.77e-26 111
Msa1428400 AT1G08900.1 30.147 272 178 5 78 348 74 334 5.67e-26 111
Msa1428400 AT1G08900.1 32.353 102 68 1 454 555 360 460 9.74e-11 64.7
Msa1428400 AT1G08900.2 30.147 272 178 5 78 348 74 334 5.67e-26 111
Msa1428400 AT1G08900.2 32.353 102 68 1 454 555 360 460 9.74e-11 64.7
Msa1428400 AT3G20460.1 27.458 295 197 6 78 366 102 385 5.84e-26 112
Msa1428400 AT1G08900.3 30.147 272 178 5 78 348 66 326 6.08e-26 111
Msa1428400 AT1G08900.3 32.353 102 68 1 454 555 352 452 9.71e-11 64.7
Msa1428400 AT4G04750.1 28.369 282 190 5 78 357 85 356 1.10e-24 107
Msa1428400 AT4G04750.1 34.000 100 65 1 452 551 371 469 6.95e-11 65.1
Msa1428400 AT4G04750.2 28.369 282 190 5 78 357 85 356 1.10e-24 107
Msa1428400 AT4G04750.2 34.000 100 65 1 452 551 371 469 6.95e-11 65.1
Msa1428400 AT4G04750.3 28.369 282 190 5 78 357 129 400 1.41e-24 108
Msa1428400 AT4G04750.3 34.000 100 65 1 452 551 415 513 4.78e-11 65.9
Msa1428400 AT1G77210.3 33.005 203 132 3 139 340 7 206 1.17e-23 103
Msa1428400 AT4G04760.3 29.110 292 188 7 78 363 21 299 2.67e-23 103
Msa1428400 AT4G04760.3 32.203 118 74 3 436 553 297 408 3.80e-11 65.9
Msa1428400 AT4G04760.1 29.110 292 188 7 78 363 80 358 3.13e-23 103
Msa1428400 AT4G04760.1 32.203 118 74 3 436 553 356 467 4.72e-11 65.9
Msa1428400 AT1G79820.3 28.016 257 176 4 14 268 44 293 8.74e-22 99.0
Msa1428400 AT4G04760.2 29.057 265 169 7 78 336 80 331 8.11e-20 93.2
Msa1428400 AT4G04760.2 32.500 120 75 3 434 553 351 464 8.92e-12 68.2
Msa1428400 AT4G35300.5 40.625 96 57 0 452 547 428 523 7.68e-16 80.9
Msa1428400 AT1G79820.5 27.044 159 114 1 110 268 75 231 7.22e-11 64.7

Find 141 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGACATTGGTTATCTTT+TGG 0.215526 tig0026345:+30407 Msa1428400:three_prime_UTR
GTTTCATAGCTTAAATTAAT+TGG 0.217938 tig0026345:+30272 Msa1428400:three_prime_UTR
GCAATTGCTGGAGCAATTAT+TGG 0.236188 tig0026345:+28279 Msa1428400:CDS
AGTATTAAATGATTTCTAAT+TGG 0.243935 tig0026345:+30565 Msa1428400:three_prime_UTR
GGAATTGTATGAAGTGTATA+AGG 0.246709 tig0026345:+29606 Msa1428400:CDS
CAGCTATGAACAATCATAAT+TGG 0.292908 tig0026345:+29585 Msa1428400:CDS
TTGACTTTGACTGTGGCAAT+TGG 0.311315 tig0026345:+30031 Msa1428400:CDS
CTTCTGTCACTAATCACTTC+TGG 0.342039 tig0026345:+29353 Msa1428400:CDS
TTTAATAGGGTCAATTATCT+TGG 0.346819 tig0026345:+28374 Msa1428400:CDS
TGCGTGTATGTTTGGATTAA+CGG 0.349020 tig0026345:+30323 Msa1428400:three_prime_UTR
ACCTCCTTCCATGCTGTTGT+TGG 0.357762 tig0026345:-24756 None:intergenic
ATAGCTGCTGTCTTGAACTC+AGG 0.365217 tig0026345:-29569 None:intergenic
CATGGAACTGTTCCCATTCC+AGG 0.373716 tig0026345:-29905 None:intergenic
TTTGATTTGGTCAAATTTGT+TGG 0.375895 tig0026345:+30372 Msa1428400:three_prime_UTR
TTCTCCCTCTGAGAAATAAT+TGG 0.381457 tig0026345:+30210 Msa1428400:exon
GATTTGTGCAGATCAAGTTT+TGG 0.388591 tig0026345:+30176 Msa1428400:CDS
ACAATGAGAGTAGCTGGATT+TGG 0.389582 tig0026345:-28405 None:intergenic
CGTATGATTAGTTGGATTGC+TGG 0.392546 tig0026345:+30474 Msa1428400:three_prime_UTR
CATGTCTTCCTTTCTACTGC+TGG 0.393342 tig0026345:-25709 None:intergenic
AGAAAGGAAGACATGGCTTC+AGG 0.394649 tig0026345:+25717 Msa1428400:CDS
AAAGCAGACATATCTGCTTC+TGG 0.397219 tig0026345:-24782 None:intergenic
ATCAGTTGAAATGGAGCTTA+AGG 0.397966 tig0026345:+29157 Msa1428400:CDS
TTGATTTGGTCAAATTTGTT+GGG 0.403219 tig0026345:+30373 Msa1428400:three_prime_UTR
ATTGTTGGTAGAGTATTTGT+TGG 0.405460 tig0026345:+28423 Msa1428400:CDS
GAGAATGTTTATCTCTATCA+TGG 0.407356 tig0026345:+24807 Msa1428400:CDS
GTTGCGGTGTCACTTTGATT+TGG 0.410522 tig0026345:+30359 Msa1428400:three_prime_UTR
ATATATTTCATTGACAAAAC+CGG 0.410815 tig0026345:+29404 Msa1428400:CDS
AAATGGGTCGTATGATTAGT+TGG 0.412737 tig0026345:+30466 Msa1428400:three_prime_UTR
ATACTTGCTGTGTTGTGTTT+CGG 0.413397 tig0026345:-24623 None:intergenic
GGCACATGGAGGTGGATGTT+AGG 0.417581 tig0026345:+28717 Msa1428400:CDS
GGATGGATCAATGATAGATT+TGG 0.419766 tig0026345:+28315 Msa1428400:CDS
GCTTCGCCAACTAGAGTTAG+AGG 0.419914 tig0026345:+28495 Msa1428400:CDS
ATTGAAAGAATCAGTTGAAA+TGG 0.425753 tig0026345:+29148 Msa1428400:CDS
CATATTCTTCTCACCTGGAA+TGG 0.431782 tig0026345:+29892 Msa1428400:CDS
GTATGTGCAGGAGTTATATC+TGG 0.439009 tig0026345:+25658 Msa1428400:intron
CCTTCCATTGTTCAGTTGGC+CGG 0.440677 tig0026345:+29305 Msa1428400:CDS
AGCAATTGCTGTACTCACTA+TGG 0.443192 tig0026345:-28265 None:intergenic
GTATTTGTTGGTCTCGGTGT+AGG 0.444492 tig0026345:+28435 Msa1428400:CDS
ACTTCTGGCCTCAATGCAAT+AGG 0.445200 tig0026345:+29368 Msa1428400:CDS
CATCAACTTGGCCTTTACTA+AGG 0.446650 tig0026345:+28575 Msa1428400:CDS
AAAGGTTGTCCTAGCAACTT+TGG 0.448496 tig0026345:+29836 Msa1428400:CDS
ATTGGAACCCCTTTAGTCTC+TGG 0.450446 tig0026345:-30124 None:intergenic
GTTAGAAGAGGTTTATATGC+AGG 0.450905 tig0026345:+29224 Msa1428400:CDS
AAAGGCCAAGTTGATGAGAT+AGG 0.452110 tig0026345:-28568 None:intergenic
CCTTTCCTATCTCATCAACT+TGG 0.453480 tig0026345:+28563 Msa1428400:CDS
TGTTGATACCGACAAATTGT+TGG 0.456542 tig0026345:-29265 None:intergenic
TGAAATTTGCAGACCAAGCC+AGG 0.459373 tig0026345:+29746 Msa1428400:intron
AACATCCACCTCCATGTGCC+TGG 0.460125 tig0026345:-28714 None:intergenic
ATCTATCCATTGAGGTATAG+AGG 0.460517 tig0026345:+29944 Msa1428400:CDS
GGTAGAGTATTTGTTGGTCT+CGG 0.467636 tig0026345:+28429 Msa1428400:CDS
ATGTCTTCCTTTCTACTGCT+GGG 0.469742 tig0026345:-25708 None:intergenic
CTGTGGCAATTGGACCTGCT+TGG 0.472061 tig0026345:+30041 Msa1428400:CDS
CAATGCAAGTTTCTTCCTCC+CGG 0.473299 tig0026345:-29423 None:intergenic
AATCCAGCTACTCTCATTGT+TGG 0.476349 tig0026345:+28408 Msa1428400:CDS
CGGTGTAGGGATGGCTTCAA+TGG 0.477124 tig0026345:+28449 Msa1428400:CDS
ATATTCTTCTCACCTGGAAT+GGG 0.477734 tig0026345:+29893 Msa1428400:CDS
AAAGCAAGACGAAGAACATA+AGG 0.481359 tig0026345:-24836 None:intergenic
GCAATTATTGGAGCTGCAAT+TGG 0.481840 tig0026345:+28291 Msa1428400:CDS
CTACCAACAATGAGAGTAGC+TGG 0.485518 tig0026345:-28411 None:intergenic
AGGGGTTCCAATGGAGGAAG+TGG 0.488028 tig0026345:+30135 Msa1428400:CDS
GATTAAACATGCACCTGGCT+TGG 0.488753 tig0026345:-29759 None:intergenic
AGGCACCAGGCACATGGAGG+TGG 0.488950 tig0026345:+28709 Msa1428400:intron
CATATTCCTCTATACCTCAA+TGG 0.493473 tig0026345:-29950 None:intergenic
AGAGGTTTATATGCAGGTTG+TGG 0.493521 tig0026345:+29230 Msa1428400:CDS
TATTTGTTGGTCTCGGTGTA+GGG 0.494879 tig0026345:+28436 Msa1428400:CDS
ATAGTGAGTACAGCAATTGC+TGG 0.496005 tig0026345:+28267 Msa1428400:CDS
TGTTGGTCTCGGTGTAGGGA+TGG 0.499710 tig0026345:+28440 Msa1428400:CDS
CGGTGAATTTGTCCGAGTTG+CGG 0.500173 tig0026345:+30343 Msa1428400:three_prime_UTR
AACTCTAGTTGGCGAAGCCT+CGG 0.502911 tig0026345:-28490 None:intergenic
TTGTGCTGCTCCTGGTGACA+TGG 0.507167 tig0026345:+29652 Msa1428400:CDS
ATGAATTCCCAGCAGTAGAA+AGG 0.509817 tig0026345:+25701 Msa1428400:CDS
AGTTTCACACACCTTAGTAA+AGG 0.510939 tig0026345:-28586 None:intergenic
CATAGAGCATGGTACACAAA+AGG 0.511414 tig0026345:+29818 Msa1428400:CDS
CTGACCAATTATTTCTCAGA+GGG 0.515286 tig0026345:-30214 None:intergenic
CTTGCATTGATTAGTTTGAC+CGG 0.517094 tig0026345:+29437 Msa1428400:CDS
CACACCAACAACAGCATGGA+AGG 0.522819 tig0026345:+24752 Msa1428400:exon
TCGCTCAGGCACCAGGCACA+TGG 0.524907 tig0026345:+28703 Msa1428400:intron
CTGGAATGGGAACAGTTCCA+TGG 0.524999 tig0026345:+29906 Msa1428400:CDS
CAGTCCTTCCATTGTTCAGT+TGG 0.529091 tig0026345:+29301 Msa1428400:CDS
ATCCTTCTTGACTTTGACTG+TGG 0.529313 tig0026345:+30024 Msa1428400:CDS
AGAGCACCTCTAACTCTAGT+TGG 0.534348 tig0026345:-28501 None:intergenic
CACTTCCCGAGTCACCTCGT+TGG 0.534418 tig0026345:+28784 Msa1428400:CDS
ATACTCTCCACTTCCTCCAT+TGG 0.537148 tig0026345:-30142 None:intergenic
GTACAACCAACGAGGTGACT+CGG 0.541162 tig0026345:-28790 None:intergenic
AAAACAACATCTGTTAGAAG+AGG 0.541737 tig0026345:+29212 Msa1428400:CDS
GTTGTCCTAGCAACTTTGGT+TGG 0.543320 tig0026345:+29840 Msa1428400:CDS
ATTTCAGAGTTAACAACCCA+TGG 0.544878 tig0026345:-29923 None:intergenic
TTCGCTTTCACGAAAAGTAA+CGG 0.545737 tig0026345:-29486 None:intergenic
TGATTTCTCGCTCAGGCACC+AGG 0.546000 tig0026345:+28696 Msa1428400:intron
ATTCTAAATATGCAAGACAT+TGG 0.551719 tig0026345:+30396 Msa1428400:three_prime_UTR
AGCACAATTTGTATCACAGC+AGG 0.556466 tig0026345:-28753 None:intergenic
TACAACCAACGAGGTGACTC+GGG 0.561888 tig0026345:-28789 None:intergenic
ACCTCGTTGGTTGTACCGCA+AGG 0.564238 tig0026345:+28797 Msa1428400:CDS
AGAGACTAAAGGGGTTCCAA+TGG 0.566345 tig0026345:+30126 Msa1428400:CDS
GAATTGTATGAAGTGTATAA+GGG 0.566500 tig0026345:+29607 Msa1428400:CDS
TAGCTGCTGTCTTGAACTCA+GGG 0.566600 tig0026345:-29568 None:intergenic
TGCCACAGTCAAAGTCAAGA+AGG 0.567232 tig0026345:-30026 None:intergenic
ATTATTGGAGCTGCAATTGG+TGG 0.568495 tig0026345:+28294 Msa1428400:CDS
TTCGAGATTAAACATGCACC+TGG 0.569618 tig0026345:-29764 None:intergenic
TACATCATATTCTTCTCACC+TGG 0.570930 tig0026345:+29887 Msa1428400:CDS
AGGGCTGAGTCCACTACTTG+TGG 0.575120 tig0026345:+29626 Msa1428400:CDS
TTGGAGCTGCAATTGGTGGA+TGG 0.577444 tig0026345:+28298 Msa1428400:CDS
TATATTTCATTGACAAAACC+GGG 0.581152 tig0026345:+29405 Msa1428400:CDS
CTGTAGAGGATTGTGAAATG+AGG 0.586256 tig0026345:+30512 Msa1428400:three_prime_UTR
GACTAAAGGGGTTCCAATGG+AGG 0.587381 tig0026345:+30129 Msa1428400:CDS
GCGATCCAACCAAAGTTGCT+AGG 0.590293 tig0026345:-29845 None:intergenic
TGGAATGGGAACAGTTCCAT+GGG 0.592733 tig0026345:+29907 Msa1428400:CDS
AGAATATGATGTAGAGTGCG+AGG 0.597439 tig0026345:-29877 None:intergenic
CCGGCCAACTGAACAATGGA+AGG 0.599512 tig0026345:-29305 None:intergenic
AAATTGAACCTATTGCATTG+AGG 0.600439 tig0026345:-29376 None:intergenic
CTTTCGATGACACTAACCAT+TGG 0.601711 tig0026345:-29518 None:intergenic
ATCAAAGTGACACCGCAACT+CGG 0.602637 tig0026345:-30355 None:intergenic
CAGCAGTAGAAAGGAAGACA+TGG 0.606845 tig0026345:+25710 Msa1428400:CDS
AGAACACACCAACAACAGCA+TGG 0.608073 tig0026345:+24748 Msa1428400:exon
AACAATGTAACAGGGCAAAG+AGG 0.608199 tig0026345:+29061 Msa1428400:intron
AATAGCATCAACAACGGTGT+GGG 0.610367 tig0026345:+29979 Msa1428400:CDS
ACTCTGAAATCTATCCATTG+AGG 0.612345 tig0026345:+29936 Msa1428400:CDS
AAGCGAAATTCATGCACCAA+TGG 0.615781 tig0026345:+29502 Msa1428400:CDS
AAGAGATTTACCATGTCACC+AGG 0.619446 tig0026345:-29662 None:intergenic
AGCACAAAATCCACAAGTAG+TGG 0.619823 tig0026345:-29636 None:intergenic
AATCCTCATGAAATCTGTAG+AGG 0.620619 tig0026345:+30498 Msa1428400:three_prime_UTR
AATATCATGAAAGTCCAAGC+AGG 0.622278 tig0026345:-30055 None:intergenic
ATCTCCTTTGTATATCTCCG+AGG 0.630924 tig0026345:+28473 Msa1428400:CDS
CCAAGTTGATGAGATAGGAA+AGG 0.636278 tig0026345:-28563 None:intergenic
TCTGACCAATTATTTCTCAG+AGG 0.636844 tig0026345:-30215 None:intergenic
GAATATGATGTAGAGTGCGA+GGG 0.637075 tig0026345:-29876 None:intergenic
AGAAGGATTGTGAAACAACA+AGG 0.638416 tig0026345:-30009 None:intergenic
AATCCTCTACAGATTTCATG+AGG 0.647807 tig0026345:-30501 None:intergenic
GCGGCGTTGATCATAGAGCA+TGG 0.648819 tig0026345:+29807 Msa1428400:CDS
GAATAGCATCAACAACGGTG+TGG 0.653838 tig0026345:+29978 Msa1428400:CDS
CGGTTAAAAGAGTCAAAGAG+AGG 0.654748 tig0026345:-29466 None:intergenic
GAAGCCTCGGAGATATACAA+AGG 0.655795 tig0026345:-28477 None:intergenic
AGGTATAGAGGAATATGCGG+AGG 0.666557 tig0026345:+29956 Msa1428400:CDS
CTCAGGCACCAGGCACATGG+AGG 0.675695 tig0026345:+28706 Msa1428400:intron
ACCAACAACAGCATGGAAGG+AGG 0.679431 tig0026345:+24755 Msa1428400:exon
AAAACCGGCCAACTGAACAA+TGG 0.684628 tig0026345:-29309 None:intergenic
TTGAGGTATAGAGGAATATG+CGG 0.686287 tig0026345:+29953 Msa1428400:CDS
AGTCAAAGAGAGGACAACAC+CGG 0.714867 tig0026345:-29456 None:intergenic
CGGAGGAATAGCATCAACAA+CGG 0.719019 tig0026345:+29973 Msa1428400:CDS
ATTTCATTGACAAAACCGGG+AGG 0.748225 tig0026345:+29408 Msa1428400:CDS
ACCTTGCGGTACAACCAACG+AGG 0.754260 tig0026345:-28798 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAAAAAAATTGGAT+TGG + tig0026345:25929-25948 Msa1428400:intron 10.0%
!! TAAGATCAAATTTAATATAT+CGG + tig0026345:26154-26173 Msa1428400:intron 10.0%
!! ACATAAAATATGAAAATTAA+TGG - tig0026345:26774-26793 None:intergenic 10.0%
!!! TATGTGATTTTATATTTATT+AGG + tig0026345:27229-27248 Msa1428400:intron 10.0%
!!! ATGTGATTTTATATTTATTA+GGG + tig0026345:27230-27249 Msa1428400:intron 10.0%
!!! ATTTTATTTTTTTAACATTC+CGG - tig0026345:28168-28187 None:intergenic 10.0%
!!! TATTGATTTTATGAAACATA+AGG - tig0026345:25290-25309 None:intergenic 15.0%
!! ATAATTAGATTAGATTTACA+TGG - tig0026345:26390-26409 None:intergenic 15.0%
!!! ATTGTTTTTGACAAATTTTT+TGG + tig0026345:26479-26498 Msa1428400:intron 15.0%
!!! TGTGATTTTATATTTATTAG+GGG + tig0026345:27231-27250 Msa1428400:intron 15.0%
!! TAAAAAAAGAGTAAACTATT+TGG - tig0026345:27421-27440 None:intergenic 15.0%
!!! AGATTTAGTAAATTACTTTT+TGG - tig0026345:27509-27528 None:intergenic 15.0%
!!! TTTTATTTTTTTAACATTCC+GGG - tig0026345:28167-28186 None:intergenic 15.0%
!! TGATAAAAAAAAAATGTAAC+AGG + tig0026345:28239-28258 Msa1428400:intron 15.0%
!! AGTATTAAATGATTTCTAAT+TGG + tig0026345:30565-30584 Msa1428400:three_prime_UTR 15.0%
!! AAAAATTTATGAAGAAACAG+AGG - tig0026345:24925-24944 None:intergenic 20.0%
!!! ATTCTTTTTAACTTCAATTG+TGG + tig0026345:25057-25076 Msa1428400:intron 20.0%
!!! TTCAAATTTTTGTGTATGTT+TGG - tig0026345:25197-25216 None:intergenic 20.0%
!!! ATTATGTAAAGGTTGATAAA+TGG + tig0026345:25632-25651 Msa1428400:intron 20.0%
!!! ATTTCAACCTTTTACTTTAA+TGG + tig0026345:25806-25825 Msa1428400:intron 20.0%
!! CATTTAATTAATGATGTATG+TGG + tig0026345:26565-26584 Msa1428400:intron 20.0%
!! GTTCAAAAAAAGACATTATT+AGG - tig0026345:26894-26913 None:intergenic 20.0%
!! AATTCAATGTAATTATGTCT+CGG - tig0026345:27077-27096 None:intergenic 20.0%
!! TTGATATAATTTAGAAGAGA+TGG - tig0026345:27187-27206 None:intergenic 20.0%
!!! ATCACATAATTTAAAACAGA+TGG - tig0026345:27217-27236 None:intergenic 20.0%
!!! GTGATTTTATATTTATTAGG+GGG + tig0026345:27232-27251 Msa1428400:intron 20.0%
!! AGTTTGGAAAAATTAATGAT+GGG - tig0026345:27259-27278 None:intergenic 20.0%
!! TTGACTAATTTATAAGAGTT+TGG - tig0026345:27275-27294 None:intergenic 20.0%
!! TTTGATGAGATAAATTACTT+GGG - tig0026345:27462-27481 None:intergenic 20.0%
!!! TTTTGATGAGATAAATTACT+TGG - tig0026345:27463-27482 None:intergenic 20.0%
!!! AATTTATTCCTTTTCATTTG+TGG - tig0026345:27533-27552 None:intergenic 20.0%
!!! GAATAAATTTTTCCTGAAAA+AGG + tig0026345:27544-27563 Msa1428400:intron 20.0%
!!! CTTTTTAACAATTATGGAAA+CGG - tig0026345:27899-27918 None:intergenic 20.0%
!! AATATATAATGCTTCTTTGT+TGG + tig0026345:28062-28081 Msa1428400:intron 20.0%
!! ACTTATAAAAACGAAAAAAG+AGG - tig0026345:28632-28651 None:intergenic 20.0%
!!! CTTTTTTCGTTTTTATAAGT+CGG + tig0026345:28632-28651 Msa1428400:intron 20.0%
!! ATTGGATGTAAAATAAAAGT+TGG + tig0026345:28890-28909 Msa1428400:intron 20.0%
!! ATATATTTCATTGACAAAAC+CGG + tig0026345:29404-29423 Msa1428400:CDS 20.0%
!! TGATGTAAAAATATCACATT+GGG - tig0026345:29689-29708 None:intergenic 20.0%
!! ATGATGTAAAAATATCACAT+TGG - tig0026345:29690-29709 None:intergenic 20.0%
!! AAAAATACAGAAGATATTTG+CGG + tig0026345:29788-29807 Msa1428400:CDS 20.0%
!! AAAAATGATGACAAAGAAAA+TGG - tig0026345:30101-30120 None:intergenic 20.0%
!! GTTTCATAGCTTAAATTAAT+TGG + tig0026345:30272-30291 Msa1428400:three_prime_UTR 20.0%
!!! AGTTAGCATTTTAATTCAAA+TGG + tig0026345:30449-30468 Msa1428400:three_prime_UTR 20.0%
!!! GTTAGCATTTTAATTCAAAT+GGG + tig0026345:30450-30469 Msa1428400:three_prime_UTR 20.0%
!!! TGATTTTAATGTTGAGTCAA+AGG + tig0026345:25335-25354 Msa1428400:intron 25.0%
! AAGAAAAGCTATTATTTGAC+TGG + tig0026345:25514-25533 Msa1428400:intron 25.0%
!! GAAAAGGGATTTATTTGTTA+AGG - tig0026345:25780-25799 None:intergenic 25.0%
! TTCAAGTCCATTAAAGTAAA+AGG - tig0026345:25816-25835 None:intergenic 25.0%
!!! TGTTTTTTTGTGAATCAAGT+TGG - tig0026345:25869-25888 None:intergenic 25.0%
! TTAGATTAGATTTACATGGT+TGG - tig0026345:26386-26405 None:intergenic 25.0%
!! ATGATACGTATGTATTCTTT+TGG + tig0026345:26454-26473 Msa1428400:intron 25.0%
!! TTTTTCCTTATATTAGTGAC+CGG - tig0026345:26530-26549 None:intergenic 25.0%
! TATGAAAATTAATGGTTGAG+AGG - tig0026345:26766-26785 None:intergenic 25.0%
!!! TCAATGGTATTTTAGTTATG+TGG - tig0026345:26847-26866 None:intergenic 25.0%
! CAAAAAAAGACATTATTAGG+AGG - tig0026345:26891-26910 None:intergenic 25.0%
!! TTTTTGAACAAATGTTCGAT+TGG + tig0026345:26905-26924 Msa1428400:intron 25.0%
! ATGCTTAATTCATAGATCAA+TGG - tig0026345:27009-27028 None:intergenic 25.0%
!!! TCTCAAAATTTTAGTTGTGT+CGG + tig0026345:27105-27124 Msa1428400:intron 25.0%
! GAGTTTGGAAAAATTAATGA+TGG - tig0026345:27260-27279 None:intergenic 25.0%
!! AACCATGAGTTTTCAAATAA+AGG + tig0026345:27293-27312 Msa1428400:intron 25.0%
!! ATCCTTTATTTGAAAACTCA+TGG - tig0026345:27298-27317 None:intergenic 25.0%
!!! GTTATTTCTAACCTAAAATG+AGG - tig0026345:27347-27366 None:intergenic 25.0%
! CGTTTCCATAATTGTTAAAA+AGG + tig0026345:27897-27916 Msa1428400:intron 25.0%
!! TGCATCCTTTTTAACAATTA+TGG - tig0026345:27905-27924 None:intergenic 25.0%
!!! TGTTTTCATTCTTTGAGAAA+AGG - tig0026345:28031-28050 None:intergenic 25.0%
! AATTGACCCTATTAAAAAGA+GGG - tig0026345:28370-28389 None:intergenic 25.0%
! TAATTGACCCTATTAAAAAG+AGG - tig0026345:28371-28390 None:intergenic 25.0%
! TTTAATAGGGTCAATTATCT+TGG + tig0026345:28374-28393 Msa1428400:CDS 25.0%
! ATCTTCTTTAACAATGTAAC+AGG + tig0026345:29052-29071 Msa1428400:intron 25.0%
! TCTTCTTTAACAATGTAACA+GGG + tig0026345:29053-29072 Msa1428400:intron 25.0%
!! AATTCTGAAAAAGATATACG+AGG + tig0026345:29097-29116 Msa1428400:CDS 25.0%
! ATTGAAAGAATCAGTTGAAA+TGG + tig0026345:29148-29167 Msa1428400:CDS 25.0%
! TATATTTCATTGACAAAACC+GGG + tig0026345:29405-29424 Msa1428400:CDS 25.0%
! GATGTAAAAATATCACATTG+GGG - tig0026345:29688-29707 None:intergenic 25.0%
!!! TTTGATTTGGTCAAATTTGT+TGG + tig0026345:30372-30391 Msa1428400:three_prime_UTR 25.0%
!!! TTGATTTGGTCAAATTTGTT+GGG + tig0026345:30373-30392 Msa1428400:three_prime_UTR 25.0%
! ATTCTAAATATGCAAGACAT+TGG + tig0026345:30396-30415 Msa1428400:three_prime_UTR 25.0%
GAGAATGTTTATCTCTATCA+TGG + tig0026345:24807-24826 Msa1428400:CDS 30.0%
ATTTATGAAGAAACAGAGGA+GGG - tig0026345:24921-24940 None:intergenic 30.0%
AATTTATGAAGAAACAGAGG+AGG - tig0026345:24922-24941 None:intergenic 30.0%
!!! CTTTTTAACTTCAATTGTGG+CGG + tig0026345:25060-25079 Msa1428400:intron 30.0%
TCATGCATTTACACAATCAA+CGG + tig0026345:25240-25259 Msa1428400:intron 30.0%
GGTTGAAATTCACAAGAAAA+GGG - tig0026345:25795-25814 None:intergenic 30.0%
AGGTTGAAATTCACAAGAAA+AGG - tig0026345:25796-25815 None:intergenic 30.0%
!!! TTTTTTGTGAATCAAGTTGG+TGG - tig0026345:25866-25885 None:intergenic 30.0%
TTTCTATGTATCACAACACT+TGG + tig0026345:25900-25919 Msa1428400:intron 30.0%
TTGATCTTATCCGTTAAATC+CGG - tig0026345:26143-26162 None:intergenic 30.0%
AGGTAAATTTGCCAATAGAA+GGG - tig0026345:26333-26352 None:intergenic 30.0%
TAGGTAAATTTGCCAATAGA+AGG - tig0026345:26334-26353 None:intergenic 30.0%
AAACTCTAAATTCATCGAGT+AGG - tig0026345:26353-26372 None:intergenic 30.0%
TACCATTGAAATTCTCTAAG+AGG + tig0026345:26858-26877 Msa1428400:intron 30.0%
TCATAGATCAATGGAAATTG+TGG - tig0026345:27000-27019 None:intergenic 30.0%
ATTTCTAACCTAAAATGAGG+TGG - tig0026345:27344-27363 None:intergenic 30.0%
TAAATCTGCCACAAATGAAA+AGG + tig0026345:27522-27541 Msa1428400:intron 30.0%
!! TTGTATTGATTCTGTGGATT+TGG + tig0026345:27652-27671 Msa1428400:intron 30.0%
ACCAATTTGAATAGTTGAAC+CGG + tig0026345:27771-27790 Msa1428400:intron 30.0%
TAACTGAATTAGAGACTCTT+CGG - tig0026345:27809-27828 None:intergenic 30.0%
AATGTTTGAATGTTCAAGTC+CGG + tig0026345:27835-27854 Msa1428400:intron 30.0%
TCTAAGAAACATGTGAGTTA+TGG - tig0026345:27868-27887 None:intergenic 30.0%
AGGATGCAATCAAATCTATA+AGG + tig0026345:27917-27936 Msa1428400:intron 30.0%
AATATGTACATCTCTTCCAA+CGG - tig0026345:28123-28142 None:intergenic 30.0%
! CAGATACCCTCTTTTTAATA+GGG + tig0026345:28361-28380 Msa1428400:CDS 30.0%
! ATTGTTGGTAGAGTATTTGT+TGG + tig0026345:28423-28442 Msa1428400:CDS 30.0%
GACTGTAATATGTCTGATTA+AGG - tig0026345:28835-28854 None:intergenic 30.0%
ACATATTACAGTCGCATAAT+CGG + tig0026345:28842-28861 Msa1428400:intron 30.0%
ATTAAGTAAAGTCAGAACGT+GGG - tig0026345:28872-28891 None:intergenic 30.0%
AATTAAGTAAAGTCAGAACG+TGG - tig0026345:28873-28892 None:intergenic 30.0%
ACGTTCTGACTTTACTTAAT+TGG + tig0026345:28872-28891 Msa1428400:intron 30.0%
!! AAAAAAGTTGCGTTGATTGA+TGG - tig0026345:28969-28988 None:intergenic 30.0%
AAAACAACATCTGTTAGAAG+AGG + tig0026345:29212-29231 Msa1428400:CDS 30.0%
! GCATTTTTCCAACAATTTGT+CGG + tig0026345:29257-29276 Msa1428400:CDS 30.0%
AAATTGAACCTATTGCATTG+AGG - tig0026345:29379-29398 None:intergenic 30.0%
CAGCTATGAACAATCATAAT+TGG + tig0026345:29585-29604 Msa1428400:CDS 30.0%
!! CAAGACATTGGTTATCTTTT+GGG + tig0026345:30408-30427 Msa1428400:three_prime_UTR 30.0%
AAAGCAAGACGAAGAACATA+AGG - tig0026345:24839-24858 None:intergenic 35.0%
CAGTATCATAGCCAAAAAGA+AGG - tig0026345:24880-24899 None:intergenic 35.0%
!!! CTTCTTTTTGGCTATGATAC+TGG + tig0026345:24878-24897 Msa1428400:CDS 35.0%
TGTCAGAATTACGATGATTC+TGG + tig0026345:25155-25174 Msa1428400:intron 35.0%
CATGCATTTACACAATCAAC+GGG + tig0026345:25241-25260 Msa1428400:intron 35.0%
! AGTGAATTTTTGCTTACCGA+AGG + tig0026345:26633-26652 Msa1428400:intron 35.0%
! GTGAATTTTTGCTTACCGAA+GGG + tig0026345:26634-26653 Msa1428400:intron 35.0%
CTATTCACATATACACCCTT+CGG - tig0026345:26652-26671 None:intergenic 35.0%
! AAGGGTGTATATGTGAATAG+AGG + tig0026345:26652-26671 Msa1428400:intron 35.0%
GTCCTCTTAGAGAATTTCAA+TGG - tig0026345:26863-26882 None:intergenic 35.0%
! AAATGTTCGATTGGTCCAAT+TGG + tig0026345:26914-26933 Msa1428400:intron 35.0%
! AATGTTCGATTGGTCCAATT+GGG + tig0026345:26915-26934 Msa1428400:intron 35.0%
! CAGGCTTTAACTACTTTGTT+GGG - tig0026345:26948-26967 None:intergenic 35.0%
! TCAGGCTTTAACTACTTTGT+TGG - tig0026345:26949-26968 None:intergenic 35.0%
! TTCAACTTTCCATTGGTTGT+TGG - tig0026345:26975-26994 None:intergenic 35.0%
! TGTGGTTTTCAACTTTCCAT+TGG - tig0026345:26982-27001 None:intergenic 35.0%
CAATGTAATTATGTCTCGGT+CGG - tig0026345:27073-27092 None:intergenic 35.0%
! AAGAGATGGAGTATTATCGT+TGG - tig0026345:27173-27192 None:intergenic 35.0%
AAAATGAGGTGGTTTCTCAT+AGG - tig0026345:27333-27352 None:intergenic 35.0%
! ATGAGAAACCACCTCATTTT+AGG + tig0026345:27333-27352 Msa1428400:intron 35.0%
! GACACTGAAAATTTTGCAAG+TGG + tig0026345:27370-27389 Msa1428400:intron 35.0%
!! CAAGTGGTGTTGTAAATTCT+TGG + tig0026345:27386-27405 Msa1428400:intron 35.0%
! ATTACGTTACTGCCTTTTTC+AGG - tig0026345:27559-27578 None:intergenic 35.0%
! AGGCAGTAACGTAATGATTT+TGG + tig0026345:27564-27583 Msa1428400:intron 35.0%
CCACAGAATCAATACAAAGA+TGG - tig0026345:27649-27668 None:intergenic 35.0%
!! CCATCTTTGTATTGATTCTG+TGG + tig0026345:27646-27665 Msa1428400:intron 35.0%
ATGTTTGAATGTTCAAGTCC+GGG + tig0026345:27836-27855 Msa1428400:intron 35.0%
!!! TTTTTTAACATTCCGGGCAA+TGG - tig0026345:28161-28180 None:intergenic 35.0%
GGATGGATCAATGATAGATT+TGG + tig0026345:28315-28334 Msa1428400:CDS 35.0%
! GCAGATACCCTCTTTTTAAT+AGG + tig0026345:28360-28379 Msa1428400:CDS 35.0%
AGTTTCACACACCTTAGTAA+AGG - tig0026345:28589-28608 None:intergenic 35.0%
!!! AGTCGGTTTTTTCTTTCACT+TGG + tig0026345:28649-28668 Msa1428400:intron 35.0%
ATCAGTTGAAATGGAGCTTA+AGG + tig0026345:29157-29176 Msa1428400:CDS 35.0%
GTTAGAAGAGGTTTATATGC+AGG + tig0026345:29224-29243 Msa1428400:CDS 35.0%
TGTTGATACCGACAAATTGT+TGG - tig0026345:29268-29287 None:intergenic 35.0%
! TGTTCTTTTCGATGCAAAAC+CGG - tig0026345:29327-29346 None:intergenic 35.0%
!! CTTGCATTGATTAGTTTGAC+CGG + tig0026345:29437-29456 Msa1428400:CDS 35.0%
TTCGCTTTCACGAAAAGTAA+CGG - tig0026345:29489-29508 None:intergenic 35.0%
TACATCATATTCTTCTCACC+TGG + tig0026345:29887-29906 Msa1428400:CDS 35.0%
ATATTCTTCTCACCTGGAAT+GGG + tig0026345:29893-29912 Msa1428400:CDS 35.0%
ATTTCAGAGTTAACAACCCA+TGG - tig0026345:29926-29945 None:intergenic 35.0%
!! ACTCTGAAATCTATCCATTG+AGG + tig0026345:29936-29955 Msa1428400:CDS 35.0%
ATCTATCCATTGAGGTATAG+AGG + tig0026345:29944-29963 Msa1428400:CDS 35.0%
CATATTCCTCTATACCTCAA+TGG - tig0026345:29953-29972 None:intergenic 35.0%
TTGAGGTATAGAGGAATATG+CGG + tig0026345:29953-29972 Msa1428400:CDS 35.0%
AGAAGGATTGTGAAACAACA+AGG - tig0026345:30012-30031 None:intergenic 35.0%
AATATCATGAAAGTCCAAGC+AGG - tig0026345:30058-30077 None:intergenic 35.0%
! ATTTTTGTGCCAGAGACTAA+AGG + tig0026345:30115-30134 Msa1428400:CDS 35.0%
! TTTTTGTGCCAGAGACTAAA+GGG + tig0026345:30116-30135 Msa1428400:CDS 35.0%
! GATTTGTGCAGATCAAGTTT+TGG + tig0026345:30176-30195 Msa1428400:CDS 35.0%
! TTCTCCCTCTGAGAAATAAT+TGG + tig0026345:30210-30229 Msa1428400:exon 35.0%
! CTGACCAATTATTTCTCAGA+GGG - tig0026345:30217-30236 None:intergenic 35.0%
! TCTGACCAATTATTTCTCAG+AGG - tig0026345:30218-30237 None:intergenic 35.0%
!!! GTTAGTTTTGCGTGTATGTT+TGG + tig0026345:30315-30334 Msa1428400:three_prime_UTR 35.0%
TGCGTGTATGTTTGGATTAA+CGG + tig0026345:30323-30342 Msa1428400:three_prime_UTR 35.0%
!! GCAAGACATTGGTTATCTTT+TGG + tig0026345:30407-30426 Msa1428400:three_prime_UTR 35.0%
AAATGGGTCGTATGATTAGT+TGG + tig0026345:30466-30485 Msa1428400:three_prime_UTR 35.0%
AATCCTCATGAAATCTGTAG+AGG + tig0026345:30498-30517 Msa1428400:three_prime_UTR 35.0%
AATCCTCTACAGATTTCATG+AGG - tig0026345:30504-30523 None:intergenic 35.0%
AAAGCAGACATATCTGCTTC+TGG - tig0026345:24785-24804 None:intergenic 40.0%
!!! CTTGCTTTTTCTGCTGGAAT+TGG + tig0026345:24851-24870 Msa1428400:CDS 40.0%
TCGTAATTCTGACATAGCGA+TGG - tig0026345:25149-25168 None:intergenic 40.0%
GTGTATGTTTGGTATGACGA+TGG - tig0026345:25186-25205 None:intergenic 40.0%
AATCACAGTTGCATGCATTG+TGG - tig0026345:25320-25339 None:intergenic 40.0%
GATAAATGGTGAGTATGTGC+AGG + tig0026345:25646-25665 Msa1428400:intron 40.0%
GTATGTGCAGGAGTTATATC+TGG + tig0026345:25658-25677 Msa1428400:intron 40.0%
ATGAATTCCCAGCAGTAGAA+AGG + tig0026345:25701-25720 Msa1428400:CDS 40.0%
ATGTCTTCCTTTCTACTGCT+GGG - tig0026345:25711-25730 None:intergenic 40.0%
GTGAAGCAGAGAACATGTAA+GGG - tig0026345:25841-25860 None:intergenic 40.0%
TGTGAAGCAGAGAACATGTA+AGG - tig0026345:25842-25861 None:intergenic 40.0%
! GTTTTCTATGTAACCCGATC+CGG + tig0026345:26121-26140 Msa1428400:intron 40.0%
TTATCCGTTAAATCCGGATC+GGG - tig0026345:26137-26156 None:intergenic 40.0%
CTTATCCGTTAAATCCGGAT+CGG - tig0026345:26138-26157 None:intergenic 40.0%
! GCAAGTTGAATCCCTTCTAT+TGG + tig0026345:26319-26338 Msa1428400:intron 40.0%
ATAATGACATGTACACCCTC+CGG + tig0026345:26508-26527 Msa1428400:intron 40.0%
TCCTTATATTAGTGACCGGA+GGG - tig0026345:26526-26545 None:intergenic 40.0%
TTCCTTATATTAGTGACCGG+AGG - tig0026345:26527-26546 None:intergenic 40.0%
! ATGTTCGATTGGTCCAATTG+GGG + tig0026345:26916-26935 Msa1428400:intron 40.0%
! TTATCGTTGGCTATGAAGCA+TGG - tig0026345:27160-27179 None:intergenic 40.0%
! GCCGGTTCAACTATTCAAAT+TGG - tig0026345:27775-27794 None:intergenic 40.0%
ATTAGAGACTCTTCGGTTCA+TGG - tig0026345:27802-27821 None:intergenic 40.0%
TGTGAGTTATGGTTCAAACC+CGG - tig0026345:27857-27876 None:intergenic 40.0%
ACCTTCATACAAATCTCCGT+TGG + tig0026345:28104-28123 Msa1428400:intron 40.0%
TCCAACGGAGATTTGTATGA+AGG - tig0026345:28108-28127 None:intergenic 40.0%
AGCAATTGCTGTACTCACTA+TGG - tig0026345:28268-28287 None:intergenic 40.0%
ATAGTGAGTACAGCAATTGC+TGG + tig0026345:28267-28286 Msa1428400:CDS 40.0%
GCAATTGCTGGAGCAATTAT+TGG + tig0026345:28279-28298 Msa1428400:CDS 40.0%
GCAATTATTGGAGCTGCAAT+TGG + tig0026345:28291-28310 Msa1428400:CDS 40.0%
ATTATTGGAGCTGCAATTGG+TGG + tig0026345:28294-28313 Msa1428400:CDS 40.0%
ACAATGAGAGTAGCTGGATT+TGG - tig0026345:28408-28427 None:intergenic 40.0%
AATCCAGCTACTCTCATTGT+TGG + tig0026345:28408-28427 Msa1428400:CDS 40.0%
! GGTAGAGTATTTGTTGGTCT+CGG + tig0026345:28429-28448 Msa1428400:CDS 40.0%
! TATTTGTTGGTCTCGGTGTA+GGG + tig0026345:28436-28455 Msa1428400:CDS 40.0%
ATCTCCTTTGTATATCTCCG+AGG + tig0026345:28473-28492 Msa1428400:CDS 40.0%
! CTCAACAGTTTTCTCATCAC+TGG + tig0026345:28531-28550 Msa1428400:CDS 40.0%
! AACAGTTTTCTCATCACTGG+TGG + tig0026345:28534-28553 Msa1428400:CDS 40.0%
!! CCAAGTTGATGAGATAGGAA+AGG - tig0026345:28566-28585 None:intergenic 40.0%
CCTTTCCTATCTCATCAACT+TGG + tig0026345:28563-28582 Msa1428400:CDS 40.0%
!! AAAGGCCAAGTTGATGAGAT+AGG - tig0026345:28571-28590 None:intergenic 40.0%
! CATCAACTTGGCCTTTACTA+AGG + tig0026345:28575-28594 Msa1428400:CDS 40.0%
TTGAACATGATTTCTCGCTC+AGG + tig0026345:28689-28708 Msa1428400:intron 40.0%
AGCACAATTTGTATCACAGC+AGG - tig0026345:28756-28775 None:intergenic 40.0%
AGGATGTTGAACTAACCTTG+CGG - tig0026345:28815-28834 None:intergenic 40.0%
GTCGTCTGACATTGATCAAA+TGG + tig0026345:28920-28939 Msa1428400:intron 40.0%
! GTTGATTGATGGTCGGATTT+GGG - tig0026345:28958-28977 None:intergenic 40.0%
!! AAGTTGCGTTGATTGATGGT+CGG - tig0026345:28965-28984 None:intergenic 40.0%
AACAATGTAACAGGGCAAAG+AGG + tig0026345:29061-29080 Msa1428400:intron 40.0%
GAAAAAGATATACGAGGTCG+AGG + tig0026345:29103-29122 Msa1428400:CDS 40.0%
AGAGGTTTATATGCAGGTTG+TGG + tig0026345:29230-29249 Msa1428400:CDS 40.0%
CTTCTGTCACTAATCACTTC+TGG + tig0026345:29353-29372 Msa1428400:CDS 40.0%
ATTTCATTGACAAAACCGGG+AGG + tig0026345:29408-29427 Msa1428400:CDS 40.0%
CGGTTAAAAGAGTCAAAGAG+AGG - tig0026345:29469-29488 None:intergenic 40.0%
AAGCGAAATTCATGCACCAA+TGG + tig0026345:29502-29521 Msa1428400:CDS 40.0%
CTTTCGATGACACTAACCAT+TGG - tig0026345:29521-29540 None:intergenic 40.0%
AGCACAAAATCCACAAGTAG+TGG - tig0026345:29639-29658 None:intergenic 40.0%
AAGAGATTTACCATGTCACC+AGG - tig0026345:29665-29684 None:intergenic 40.0%
TTCGAGATTAAACATGCACC+TGG - tig0026345:29767-29786 None:intergenic 40.0%
CATAGAGCATGGTACACAAA+AGG + tig0026345:29818-29837 Msa1428400:CDS 40.0%
AAAGGTTGTCCTAGCAACTT+TGG + tig0026345:29836-29855 Msa1428400:CDS 40.0%
GAATATGATGTAGAGTGCGA+GGG - tig0026345:29879-29898 None:intergenic 40.0%
AGAATATGATGTAGAGTGCG+AGG - tig0026345:29880-29899 None:intergenic 40.0%
CATATTCTTCTCACCTGGAA+TGG + tig0026345:29892-29911 Msa1428400:CDS 40.0%
AATAGCATCAACAACGGTGT+GGG + tig0026345:29979-29998 Msa1428400:CDS 40.0%
ATCCTTCTTGACTTTGACTG+TGG + tig0026345:30024-30043 Msa1428400:CDS 40.0%
TTGACTTTGACTGTGGCAAT+TGG + tig0026345:30031-30050 Msa1428400:CDS 40.0%
! TTTTGTGCCAGAGACTAAAG+GGG + tig0026345:30117-30136 Msa1428400:CDS 40.0%
! CGTATGATTAGTTGGATTGC+TGG + tig0026345:30474-30493 Msa1428400:three_prime_UTR 40.0%
CTGTAGAGGATTGTGAAATG+AGG + tig0026345:30512-30531 Msa1428400:three_prime_UTR 40.0%
AGAACACACCAACAACAGCA+TGG + tig0026345:24748-24767 Msa1428400:exon 45.0%
!!! CTTCGTCTTGCTTTTTCTGC+TGG + tig0026345:24845-24864 Msa1428400:CDS 45.0%
!! GCTTTTTCTGCTGGAATTGG+TGG + tig0026345:24854-24873 Msa1428400:CDS 45.0%
!! GGAATTGGTGGCCTTCTTTT+TGG + tig0026345:24866-24885 Msa1428400:CDS 45.0%
TATGAAGAAACAGAGGAGGG+TGG - tig0026345:24918-24937 None:intergenic 45.0%
CATGTCTTCCTTTCTACTGC+TGG - tig0026345:25712-25731 None:intergenic 45.0%
CAGCAGTAGAAAGGAAGACA+TGG + tig0026345:25710-25729 Msa1428400:CDS 45.0%
AGAAAGGAAGACATGGCTTC+AGG + tig0026345:25717-25736 Msa1428400:CDS 45.0%
GTAACCCGATCCGGATTTAA+CGG + tig0026345:26130-26149 Msa1428400:intron 45.0%
ACCCTCCGGTCACTAATATA+AGG + tig0026345:26522-26541 Msa1428400:intron 45.0%
! TCCATTGGTTGTTGGTGTTC+AGG - tig0026345:26967-26986 None:intergenic 45.0%
TGGCTATGAAGCATGGATAC+TGG - tig0026345:27153-27172 None:intergenic 45.0%
GGTGGTTTCTCATAGGTTTC+TGG - tig0026345:27326-27345 None:intergenic 45.0%
CTACCAACAATGAGAGTAGC+TGG - tig0026345:28414-28433 None:intergenic 45.0%
! GTATTTGTTGGTCTCGGTGT+AGG + tig0026345:28435-28454 Msa1428400:CDS 45.0%
GAAGCCTCGGAGATATACAA+AGG - tig0026345:28480-28499 None:intergenic 45.0%
! AGAGCACCTCTAACTCTAGT+TGG - tig0026345:28504-28523 None:intergenic 45.0%
! GTCGGATTTGGGTTTCTATC+TGG - tig0026345:28947-28966 None:intergenic 45.0%
! CGTTGATTGATGGTCGGATT+TGG - tig0026345:28959-28978 None:intergenic 45.0%
CAGTCCTTCCATTGTTCAGT+TGG + tig0026345:29301-29320 Msa1428400:CDS 45.0%
AAAACCGGCCAACTGAACAA+TGG - tig0026345:29312-29331 None:intergenic 45.0%
ACTTCTGGCCTCAATGCAAT+AGG + tig0026345:29368-29387 Msa1428400:CDS 45.0%
CAATGCAAGTTTCTTCCTCC+CGG - tig0026345:29426-29445 None:intergenic 45.0%
AGTCAAAGAGAGGACAACAC+CGG - tig0026345:29459-29478 None:intergenic 45.0%
TAGCTGCTGTCTTGAACTCA+GGG - tig0026345:29571-29590 None:intergenic 45.0%
ATAGCTGCTGTCTTGAACTC+AGG - tig0026345:29572-29591 None:intergenic 45.0%
TGAAATTTGCAGACCAAGCC+AGG + tig0026345:29746-29765 Msa1428400:intron 45.0%
GATTAAACATGCACCTGGCT+TGG - tig0026345:29762-29781 None:intergenic 45.0%
GTTGTCCTAGCAACTTTGGT+TGG + tig0026345:29840-29859 Msa1428400:CDS 45.0%
TGGAATGGGAACAGTTCCAT+GGG + tig0026345:29907-29926 Msa1428400:CDS 45.0%
AGGTATAGAGGAATATGCGG+AGG + tig0026345:29956-29975 Msa1428400:CDS 45.0%
CGGAGGAATAGCATCAACAA+CGG + tig0026345:29973-29992 Msa1428400:CDS 45.0%
GAATAGCATCAACAACGGTG+TGG + tig0026345:29978-29997 Msa1428400:CDS 45.0%
TGCCACAGTCAAAGTCAAGA+AGG - tig0026345:30029-30048 None:intergenic 45.0%
ATTGGAACCCCTTTAGTCTC+TGG - tig0026345:30127-30146 None:intergenic 45.0%
AGAGACTAAAGGGGTTCCAA+TGG + tig0026345:30126-30145 Msa1428400:CDS 45.0%
ATACTCTCCACTTCCTCCAT+TGG - tig0026345:30145-30164 None:intergenic 45.0%
ATCAAAGTGACACCGCAACT+CGG - tig0026345:30358-30377 None:intergenic 45.0%
!! GTTGCGGTGTCACTTTGATT+TGG + tig0026345:30359-30378 Msa1428400:three_prime_UTR 45.0%
!!! TATCATTTTTATATTTTTAA+AGG + tig0026345:25441-25460 Msa1428400:intron 5.0%
!! TTATTTATATTATTATGTAA+AGG + tig0026345:25621-25640 Msa1428400:intron 5.0%
!! CTTAAATAATATAAAAAAAT+TGG + tig0026345:25924-25943 Msa1428400:intron 5.0%
CACACCAACAACAGCATGGA+AGG + tig0026345:24752-24771 Msa1428400:exon 50.0%
ACCAACAACAGCATGGAAGG+AGG + tig0026345:24755-24774 Msa1428400:exon 50.0%
ACCTCCTTCCATGCTGTTGT+TGG - tig0026345:24759-24778 None:intergenic 50.0%
GCAGAGCAAGCACATGTATC+TGG + tig0026345:26819-26838 Msa1428400:intron 50.0%
! TCGATTGGTCCAATTGGGGA+TGG + tig0026345:26920-26939 Msa1428400:intron 50.0%
TGTTGGGTACCATCCCCAAT+TGG - tig0026345:26932-26951 None:intergenic 50.0%
GCCTGAACACCAACAACCAA+TGG + tig0026345:26963-26982 Msa1428400:intron 50.0%
GGTCGGTCGAACAAGACATA+AGG - tig0026345:27056-27075 None:intergenic 50.0%
TCTTCGGTTCATGGTTCAGC+CGG - tig0026345:27793-27812 None:intergenic 50.0%
TTGGAGCTGCAATTGGTGGA+TGG + tig0026345:28298-28317 Msa1428400:CDS 50.0%
AACTCTAGTTGGCGAAGCCT+CGG - tig0026345:28493-28512 None:intergenic 50.0%
GCTTCGCCAACTAGAGTTAG+AGG + tig0026345:28495-28514 Msa1428400:CDS 50.0%
TACAACCAACGAGGTGACTC+GGG - tig0026345:28792-28811 None:intergenic 50.0%
GTACAACCAACGAGGTGACT+CGG - tig0026345:28793-28812 None:intergenic 50.0%
CCTTCCATTGTTCAGTTGGC+CGG + tig0026345:29305-29324 Msa1428400:CDS 50.0%
!! TGTGGATTTTGTGCTGCTCC+TGG + tig0026345:29644-29663 Msa1428400:CDS 50.0%
GCGATCCAACCAAAGTTGCT+AGG - tig0026345:29848-29867 None:intergenic 50.0%
CATGGAACTGTTCCCATTCC+AGG - tig0026345:29908-29927 None:intergenic 50.0%
CTGGAATGGGAACAGTTCCA+TGG + tig0026345:29906-29925 Msa1428400:CDS 50.0%
GACTAAAGGGGTTCCAATGG+AGG + tig0026345:30129-30148 Msa1428400:CDS 50.0%
CGGTGAATTTGTCCGAGTTG+CGG + tig0026345:30343-30362 Msa1428400:three_prime_UTR 50.0%
! TGTTGGTCTCGGTGTAGGGA+TGG + tig0026345:28440-28459 Msa1428400:CDS 55.0%
CGGTGTAGGGATGGCTTCAA+TGG + tig0026345:28449-28468 Msa1428400:CDS 55.0%
TGATTTCTCGCTCAGGCACC+AGG + tig0026345:28696-28715 Msa1428400:intron 55.0%
AACATCCACCTCCATGTGCC+TGG - tig0026345:28717-28736 None:intergenic 55.0%
GGCACATGGAGGTGGATGTT+AGG + tig0026345:28717-28736 Msa1428400:CDS 55.0%
! ACCTCGTTGGTTGTACCGCA+AGG + tig0026345:28797-28816 Msa1428400:CDS 55.0%
ACCTTGCGGTACAACCAACG+AGG - tig0026345:28801-28820 None:intergenic 55.0%
CCGGCCAACTGAACAATGGA+AGG - tig0026345:29308-29327 None:intergenic 55.0%
AGGGCTGAGTCCACTACTTG+TGG + tig0026345:29626-29645 Msa1428400:CDS 55.0%
! TTGTGCTGCTCCTGGTGACA+TGG + tig0026345:29652-29671 Msa1428400:CDS 55.0%
!! GCGGCGTTGATCATAGAGCA+TGG + tig0026345:29807-29826 Msa1428400:CDS 55.0%
CTGTGGCAATTGGACCTGCT+TGG + tig0026345:30041-30060 Msa1428400:CDS 55.0%
AGGGGTTCCAATGGAGGAAG+TGG + tig0026345:30135-30154 Msa1428400:CDS 55.0%
TCCCAGACGATGCCATTGCC+CGG + tig0026345:28146-28165 Msa1428400:intron 60.0%
TCCGGGCAATGGCATCGTCT+GGG - tig0026345:28150-28169 None:intergenic 60.0%
TTCCGGGCAATGGCATCGTC+TGG - tig0026345:28151-28170 None:intergenic 60.0%
CACTTCCCGAGTCACCTCGT+TGG + tig0026345:28784-28803 Msa1428400:CDS 60.0%
TCGCTCAGGCACCAGGCACA+TGG + tig0026345:28703-28722 Msa1428400:intron 65.0%
CTCAGGCACCAGGCACATGG+AGG + tig0026345:28706-28725 Msa1428400:intron 65.0%
AGGCACCAGGCACATGGAGG+TGG + tig0026345:28709-28728 Msa1428400:intron 65.0%
Chromosome Type Strat End Strand Name
tig0026345 gene 24625 30590 24625 ID=Msa1428400;Name=Msa1428400
tig0026345 mRNA 24625 30590 24625 ID=Msa1428400-mRNA-1;Parent=Msa1428400;Name=Msa1428400-mRNA-1;_AED=0.06;_eAED=0.06;_QI=142|1|1|1|1|1|6|362|572
tig0026345 exon 24625 24899 24625 ID=Msa1428400-mRNA-1:exon:5955;Parent=Msa1428400-mRNA-1
tig0026345 exon 25668 25738 25668 ID=Msa1428400-mRNA-1:exon:5956;Parent=Msa1428400-mRNA-1
tig0026345 exon 28261 28596 28261 ID=Msa1428400-mRNA-1:exon:5957;Parent=Msa1428400-mRNA-1
tig0026345 exon 28711 28818 28711 ID=Msa1428400-mRNA-1:exon:5958;Parent=Msa1428400-mRNA-1
tig0026345 exon 29074 29673 29074 ID=Msa1428400-mRNA-1:exon:5959;Parent=Msa1428400-mRNA-1
tig0026345 exon 29758 30590 29758 ID=Msa1428400-mRNA-1:exon:5960;Parent=Msa1428400-mRNA-1
tig0026345 five_prime_UTR 24625 24766 24625 ID=Msa1428400-mRNA-1:five_prime_utr;Parent=Msa1428400-mRNA-1
tig0026345 CDS 24767 24899 24767 ID=Msa1428400-mRNA-1:cds;Parent=Msa1428400-mRNA-1
tig0026345 CDS 25668 25738 25668 ID=Msa1428400-mRNA-1:cds;Parent=Msa1428400-mRNA-1
tig0026345 CDS 28261 28596 28261 ID=Msa1428400-mRNA-1:cds;Parent=Msa1428400-mRNA-1
tig0026345 CDS 28711 28818 28711 ID=Msa1428400-mRNA-1:cds;Parent=Msa1428400-mRNA-1
tig0026345 CDS 29074 29673 29074 ID=Msa1428400-mRNA-1:cds;Parent=Msa1428400-mRNA-1
tig0026345 CDS 29758 30228 29758 ID=Msa1428400-mRNA-1:cds;Parent=Msa1428400-mRNA-1
tig0026345 three_prime_UTR 30229 30590 30229 ID=Msa1428400-mRNA-1:three_prime_utr;Parent=Msa1428400-mRNA-1
Gene Sequence

>Msa1428400

ATGGAAGGAGGTGTACCAGAAGCAGATATGTCTGCTTTCAGAGAATGTTTATCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTTTCTGCTGGAATTGGTGGCCTTCTTTTTGGCTATGATACTGGAGTTATATCTGGAGCTCTTTTGTATATAAGAGATGAATTCCCAGCAGTAGAAAGGAAGACATGGCTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATTATTGGAGCTGCAATTGGTGGATGGATCAATGATAGATTTGGAAGAAAAGTATCAATAATTGTTGCAGATACCCTCTTTTTAATAGGGTCAATTATCTTGGCTGCTGCTCCAAATCCAGCTACTCTCATTGTTGGTAGAGTATTTGTTGGTCTCGGTGTAGGGATGGCTTCAATGGCATCTCCTTTGTATATCTCCGAGGCTTCGCCAACTAGAGTTAGAGGTGCTCTTGTTAGTCTCAACAGTTTTCTCATCACTGGTGGACAGTTCCTTTCCTATCTCATCAACTTGGCCTTTACTAAGGCACCAGGCACATGGAGGTGGATGTTAGGAGTTGCAGCAGCACCTGCTGTGATACAAATTGTGCTCATGTTGTCACTTCCCGAGTCACCTCGTTGGTTGTACCGCAAGGGCAAAGAGGAAGAAGCAAAAGTAATTCTGAAAAAGATATACGAGGTCGAGGACTATGACAATGAGATTCAAGCATTGAAAGAATCAGTTGAAATGGAGCTTAAGGAAACAGAAAAAATCAGCATAATGCAGCTTCTAAAAACAACATCTGTTAGAAGAGGTTTATATGCAGGTTGTGGACTTGCATTTTTCCAACAATTTGTCGGTATCAACACTGTGATGTACTACAGTCCTTCCATTGTTCAGTTGGCCGGTTTTGCATCGAAAAGAACAGCACTTCTTCTGTCACTAATCACTTCTGGCCTCAATGCAATAGGTTCAATTTTGAGCATATATTTCATTGACAAAACCGGGAGGAAGAAACTTGCATTGATTAGTTTGACCGGTGTTGTCCTCTCTTTGACTCTTTTAACCGTTACTTTTCGTGAAAGCGAAATTCATGCACCAATGGTTAGTGTCATCGAAAGCTCTCATTTCAATAACACTAACACATGCCCTGAGTTCAAGACAGCAGCTATGAACAATCATAATTGGAATTGTATGAAGTGTATAAGGGCTGAGTCCACTACTTGTGGATTTTGTGCTGCTCCTGGTGACATGACCAAGCCAGGTGCATGTTTAATCTCGAATAAAAATACAGAAGATATTTGCGGCGTTGATCATAGAGCATGGTACACAAAAGGTTGTCCTAGCAACTTTGGTTGGATCGCTATAATAGCCCTCGCACTCTACATCATATTCTTCTCACCTGGAATGGGAACAGTTCCATGGGTTGTTAACTCTGAAATCTATCCATTGAGGTATAGAGGAATATGCGGAGGAATAGCATCAACAACGGTGTGGGTTTCTAACCTTGTTGTTTCACAATCCTTCTTGACTTTGACTGTGGCAATTGGACCTGCTTGGACTTTCATGATATTTGCAATCATTGCTATTGTTGCCATTTTCTTTGTCATCATTTTTGTGCCAGAGACTAAAGGGGTTCCAATGGAGGAAGTGGAGAGTATGCTTGAAAAGAGATTTGTGCAGATCAAGTTTTGGAAGAAGAGAGATTCTCCCTCTGAGAAATAA
Protein sequence

>Msa1428400

MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFPAVERKTWLQEAIVSTAIAGAIIGAAIGGWINDRFGRKVSIIVADTLFLIGSIILAAAPNPATLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPGTWRWMLGVAAAPAVIQIVLMLSLPESPRWLYRKGKEEEAKVILKKIYEVEDYDNEIQALKESVEMELKETEKISIMQLLKTTSVRRGLYAGCGLAFFQQFVGINTVMYYSPSIVQLAGFASKRTALLLSLITSGLNAIGSILSIYFIDKTGRKKLALISLTGVVLSLTLLTVTFRESEIHAPMVSVIESSHFNNTNTCPEFKTAAMNNHNWNCMKCIRAESTTCGFCAAPGDMTKPGACLISNKNTEDICGVDHRAWYTKGCPSNFGWIAIIALALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTTVWVSNLVVSQSFLTLTVAIGPAWTFMIFAIIAIVAIFFVIIFVPETKGVPMEEVESMLEKRFVQIKFWKKRDSPSEK*