Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253300 | XP_003596004.1 | 69.231 | 117 | 2 | 1 | 1 | 83 | 1 | 117 | 3.73e-43 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253300 | B7FN21 | 69.231 | 117 | 2 | 1 | 1 | 83 | 1 | 117 | 1.78e-43 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0253300 | Msa0389800 | 0.829408 | 5.235221e-55 | -8.615850e-47 |
| Msa0253300 | Msa0468140 | 0.842410 | 2.629693e-58 | -8.615850e-47 |
| Msa0253300 | Msa0982260 | 0.829002 | 6.566169e-55 | -8.615850e-47 |
| Msa0253300 | Msa1307730 | 0.833356 | 5.589385e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253300 | MtrunA17_Chr2g0312591 | 69.231 | 117 | 2 | 1 | 1 | 83 | 1 | 117 | 3.43e-47 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253300 | AT5G64130.1 | 39.831 | 118 | 32 | 3 | 1 | 82 | 1 | 115 | 8.49e-17 | 69.3 |
Find 50 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGCGTAAGGGGATTTC+CGG | 0.294868 | 2_2:-44993464 | None:intergenic |
| ATATGAAAAGAACCTGCTTT+TGG | 0.296974 | 2_2:-44992001 | None:intergenic |
| TATTGTTCTGATACCTCATT+AGG | 0.302021 | 2_2:+44993652 | Msa0253300:three_prime_UTR |
| TAAAATACTGTTGATTTGTT+TGG | 0.325835 | 2_2:+44993927 | Msa0253300:three_prime_UTR |
| GTATGAAGGGAAGGGGAAGA+AGG | 0.367540 | 2_2:-44993798 | None:intergenic |
| ACTGTTGATTTGTTTGGTTT+CGG | 0.372206 | 2_2:+44993933 | Msa0253300:three_prime_UTR |
| CGCAGCAGCAAACACGTTAC+CGG | 0.407404 | 2_2:+44993445 | Msa0253300:CDS |
| TGAATGTAAGAAAAGGGATT+AGG | 0.416481 | 2_2:+44989036 | Msa0253300:five_prime_UTR |
| TTGAATTGAATGTAAGAAAA+GGG | 0.417026 | 2_2:+44989030 | Msa0253300:five_prime_UTR |
| ATTGAATTGAATGTAAGAAA+AGG | 0.424852 | 2_2:+44989029 | Msa0253300:five_prime_UTR |
| AAATCCCCTTACGCTCCTTC+CGG | 0.426971 | 2_2:+44993468 | Msa0253300:CDS |
| TTCAAAACTATGAAATAAAG+AGG | 0.443750 | 2_2:-44993820 | None:intergenic |
| TGCTGCTTCCCTCACATCTC+CGG | 0.445219 | 2_2:+44989148 | Msa0253300:five_prime_UTR |
| CTCAACACCGACCCGACGTT+CGG | 0.450960 | 2_2:+44989107 | Msa0253300:five_prime_UTR |
| TGAGCGGAGCACCGAACGTC+GGG | 0.462061 | 2_2:-44989118 | None:intergenic |
| TATGAAATAAAGAGGTATGA+AGG | 0.473794 | 2_2:-44993812 | None:intergenic |
| TATGAAGGGAAGGGGAAGAA+GGG | 0.481069 | 2_2:-44993797 | None:intergenic |
| TAACGTGTTTGCTGCTGCGT+TGG | 0.485967 | 2_2:-44993441 | None:intergenic |
| AAACAATAAGAAATTAATGA+TGG | 0.496359 | 2_2:+44993851 | Msa0253300:three_prime_UTR |
| TAAAGAGGTATGAAGGGAAG+GGG | 0.508738 | 2_2:-44993805 | None:intergenic |
| CCTTCACCGGAAGGAGCGTA+AGG | 0.513456 | 2_2:-44993474 | None:intergenic |
| CCTTACGCTCCTTCCGGTGA+AGG | 0.513735 | 2_2:+44993474 | Msa0253300:CDS |
| AAATTAAAACATACCTTCAC+CGG | 0.515718 | 2_2:-44993487 | None:intergenic |
| TTGGAAGCTGCATCCTCAGA+TGG | 0.522717 | 2_2:-44993610 | None:intergenic |
| AAACAAAGACATTGGACAGA+TGG | 0.536462 | 2_2:+44991938 | Msa0253300:CDS |
| ATGAAATAAAGAGGTATGAA+GGG | 0.536689 | 2_2:-44993811 | None:intergenic |
| AAGAAATTAATGATGGATAG+TGG | 0.544714 | 2_2:+44993858 | Msa0253300:three_prime_UTR |
| ATAAAGAGGTATGAAGGGAA+GGG | 0.546301 | 2_2:-44993806 | None:intergenic |
| GTTCGGTGCTCCGCTCATCA+CGG | 0.546326 | 2_2:+44989124 | Msa0253300:five_prime_UTR |
| AATAAAGAGGTATGAAGGGA+AGG | 0.554646 | 2_2:-44993807 | None:intergenic |
| CATGCCATCACCCCAAAAGC+AGG | 0.559564 | 2_2:+44991989 | Msa0253300:CDS |
| ATAGAGGAAAACAAAGACAT+TGG | 0.560634 | 2_2:+44991930 | Msa0253300:CDS |
| AAAGCCACCACTTATTTCCA+AGG | 0.561400 | 2_2:+44992192 | Msa0253300:CDS |
| ATGGATGTGGATGCATCTGA+TGG | 0.574994 | 2_2:+44991957 | Msa0253300:CDS |
| GGATCACATGTCAAACATAG+AGG | 0.587961 | 2_2:+44991914 | Msa0253300:exon |
| AGAACTGACCGGAGATGTGA+GGG | 0.588935 | 2_2:-44989156 | None:intergenic |
| AGGTGGAAGTGTTCCATCTG+AGG | 0.593464 | 2_2:+44993597 | Msa0253300:CDS |
| TTCACCGGAAGGAGCGTAAG+GGG | 0.603501 | 2_2:-44993472 | None:intergenic |
| AAGAACTGACCGGAGATGTG+AGG | 0.611778 | 2_2:-44989157 | None:intergenic |
| CTTCACCGGAAGGAGCGTAA+GGG | 0.612254 | 2_2:-44993473 | None:intergenic |
| AGTCCCTACAGCAAAACTGC+AGG | 0.614184 | 2_2:-44993749 | None:intergenic |
| TTAATGATGGATAGTGGTCA+TGG | 0.625530 | 2_2:+44993864 | Msa0253300:three_prime_UTR |
| TAAAACATACCTTCACCGGA+AGG | 0.628441 | 2_2:-44993483 | None:intergenic |
| GAAGCAGCAACCGTGATGAG+CGG | 0.632408 | 2_2:-44989134 | None:intergenic |
| TGGTGTACCTTGGAAATAAG+TGG | 0.633332 | 2_2:-44992199 | None:intergenic |
| AGACATTGGACAGATGGATG+TGG | 0.636895 | 2_2:+44991944 | Msa0253300:CDS |
| CGGAGCACCGAACGTCGGGT+CGG | 0.637467 | 2_2:-44989114 | None:intergenic |
| ATGAGCGGAGCACCGAACGT+CGG | 0.650848 | 2_2:-44989119 | None:intergenic |
| TGGATGTGGATGCATCTGAT+GGG | 0.677419 | 2_2:+44991958 | Msa0253300:CDS |
| TGTACCTTGGAAATAAGTGG+TGG | 0.738918 | 2_2:-44992196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTGTAAATTTGTAATATT+AGG | + | chr2_2:44989571-44989590 | Msa0253300:intron | 10.0% |
| !! | AAAAAATAAAGAAATTCATT+TGG | - | chr2_2:44992105-44992124 | None:intergenic | 10.0% |
| !! | TACAAATTTACAATTAAACA+AGG | - | chr2_2:44989566-44989585 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTGTTGAAATTT+GGG | + | chr2_2:44991015-44991034 | Msa0253300:intron | 15.0% |
| !!! | GAAACTTTAAAGAAAAAATA+TGG | + | chr2_2:44992154-44992173 | Msa0253300:CDS | 15.0% |
| !!! | ACAAATAAATTTTCTAATTG+TGG | + | chr2_2:44992936-44992955 | Msa0253300:intron | 15.0% |
| !!! | TATTTATTACTACAGTTTTT+TGG | + | chr2_2:44993024-44993043 | Msa0253300:intron | 15.0% |
| !! | TCAAACACATTAAAATAAAA+TGG | - | chr2_2:44993390-44993409 | None:intergenic | 15.0% |
| !!! | TAAATTCTTCTTTTTATAGA+AGG | + | chr2_2:44993577-44993596 | Msa0253300:intron | 15.0% |
| !!! | TTTATTTCATAGTTTTGAAA+AGG | + | chr2_2:44993824-44993843 | Msa0253300:three_prime_UTR | 15.0% |
| !! | AAACAATAAGAAATTAATGA+TGG | + | chr2_2:44993851-44993870 | Msa0253300:three_prime_UTR | 15.0% |
| !! | ATTGAATTGAATGTAAGAAA+AGG | + | chr2_2:44989029-44989048 | Msa0253300:five_prime_UTR | 20.0% |
| !! | TTGAATTGAATGTAAGAAAA+GGG | + | chr2_2:44989030-44989049 | Msa0253300:five_prime_UTR | 20.0% |
| !! | CAAAATAATTGAAGCTAAAT+CGG | - | chr2_2:44989249-44989268 | None:intergenic | 20.0% |
| !!! | TTTAGCTTCAATTATTTTGT+TGG | + | chr2_2:44989250-44989269 | Msa0253300:intron | 20.0% |
| !! | AATGAATTAATTGAACGTAA+CGG | - | chr2_2:44989433-44989452 | None:intergenic | 20.0% |
| !!! | TTTTTTTAAATTATTACCGC+CGG | + | chr2_2:44989452-44989471 | Msa0253300:intron | 20.0% |
| !!! | TTTTAACCCCAAAAAAATTA+GGG | + | chr2_2:44990007-44990026 | Msa0253300:intron | 20.0% |
| !!! | AATTTTTTAATAACGTATCG+AGG | + | chr2_2:44990452-44990471 | Msa0253300:intron | 20.0% |
| !!! | GATTTCTTTTTGTTGAAATT+TGG | + | chr2_2:44991014-44991033 | Msa0253300:intron | 20.0% |
| !!! | TTTCTTTTTGTTGAAATTTG+GGG | + | chr2_2:44991016-44991035 | Msa0253300:intron | 20.0% |
| !!! | GAAAAAGAAATAGAAGTATT+GGG | - | chr2_2:44991349-44991368 | None:intergenic | 20.0% |
| !!! | AGAAAAAGAAATAGAAGTAT+TGG | - | chr2_2:44991350-44991369 | None:intergenic | 20.0% |
| !! | CTTCATCTGAAAAATTTATT+GGG | - | chr2_2:44991463-44991482 | None:intergenic | 20.0% |
| !! | ACTTCATCTGAAAAATTTAT+TGG | - | chr2_2:44991464-44991483 | None:intergenic | 20.0% |
| !! | TTTCTATTTGTTTAAATGTG+TGG | + | chr2_2:44991630-44991649 | Msa0253300:intron | 20.0% |
| !! | ATTAGATATTCTCTTTACTA+TGG | + | chr2_2:44992068-44992087 | Msa0253300:intron | 20.0% |
| !!! | ACTTTAAAGAAAAAATATGG+AGG | + | chr2_2:44992157-44992176 | Msa0253300:CDS | 20.0% |
| !! | AAATTAAATACCTGTAGTTT+AGG | - | chr2_2:44992747-44992766 | None:intergenic | 20.0% |
| !! | CCATATATAAATCAGATATT+GGG | - | chr2_2:44992779-44992798 | None:intergenic | 20.0% |
| !! | TGTAATAATAAATACTCCAT+CGG | - | chr2_2:44993113-44993132 | None:intergenic | 20.0% |
| !! | ACACATTAAAATAAAATGGA+AGG | - | chr2_2:44993386-44993405 | None:intergenic | 20.0% |
| !! | TTCAAAACTATGAAATAAAG+AGG | - | chr2_2:44993823-44993842 | None:intergenic | 20.0% |
| !!! | TAAAATACTGTTGATTTGTT+TGG | + | chr2_2:44993927-44993946 | Msa0253300:three_prime_UTR | 20.0% |
| ! | CCAATATGTCAAAAACTAAT+TGG | - | chr2_2:44989518-44989537 | None:intergenic | 25.0% |
| !!! | CCAATTAGTTTTTGACATAT+TGG | + | chr2_2:44989515-44989534 | Msa0253300:intron | 25.0% |
| !!! | TTTCACTATTTTTGGAGTAT+CGG | - | chr2_2:44989748-44989767 | None:intergenic | 25.0% |
| !! | GCATGATTTTTCACTATTTT+TGG | - | chr2_2:44989756-44989775 | None:intergenic | 25.0% |
| ! | AAAAAATTACCAATACGTGT+CGG | + | chr2_2:44989859-44989878 | Msa0253300:intron | 25.0% |
| !! | AATATGTACGAAAGAAGTAT+CGG | - | chr2_2:44989909-44989928 | None:intergenic | 25.0% |
| !! | CTTTTAACCCCAAAAAAATT+AGG | + | chr2_2:44990006-44990025 | Msa0253300:intron | 25.0% |
| !!! | AAAGAGAAGAAGGTATTAAA+GGG | - | chr2_2:44990191-44990210 | None:intergenic | 25.0% |
| !!! | TAAAGAGAAGAAGGTATTAA+AGG | - | chr2_2:44990192-44990211 | None:intergenic | 25.0% |
| ! | CAATCTGAATTAGTATTAAG+TGG | + | chr2_2:44990267-44990286 | Msa0253300:intron | 25.0% |
| !! | CCAGAAAATTTTCAAAATTC+CGG | - | chr2_2:44990489-44990508 | None:intergenic | 25.0% |
| !!! | AATGTCCTTTACTTTTGATT+AGG | + | chr2_2:44990697-44990716 | Msa0253300:intron | 25.0% |
| ! | ACTATCCTAATCAAAAGTAA+AGG | - | chr2_2:44990705-44990724 | None:intergenic | 25.0% |
| !!! | AAATTTTGAGTAGTCTCAAT+CGG | + | chr2_2:44990862-44990881 | Msa0253300:intron | 25.0% |
| !! | AAGAAAAACTTCAAGTTAGA+AGG | + | chr2_2:44990900-44990919 | Msa0253300:intron | 25.0% |
| !! | AGAAAAACTTCAAGTTAGAA+GGG | + | chr2_2:44990901-44990920 | Msa0253300:intron | 25.0% |
| !! | AAAGTCTGTAATCAGAATTT+TGG | - | chr2_2:44991515-44991534 | None:intergenic | 25.0% |
| ! | CCCAATATCTGATTTATATA+TGG | + | chr2_2:44992776-44992795 | Msa0253300:intron | 25.0% |
| ! | GCCATATATAAATCAGATAT+TGG | - | chr2_2:44992780-44992799 | None:intergenic | 25.0% |
| !!! | TCTCCATTTCTTTTGAAAAA+CGG | - | chr2_2:44993004-44993023 | None:intergenic | 25.0% |
| ! | TGGTGTATAAAGAATATAAG+CGG | + | chr2_2:44993044-44993063 | Msa0253300:intron | 25.0% |
| !!! | TTCTTGTTTTATAATCCAGT+TGG | + | chr2_2:44993074-44993093 | Msa0253300:intron | 25.0% |
| ! | TTAATTGTGTTCAACTATGA+AGG | - | chr2_2:44993156-44993175 | None:intergenic | 25.0% |
| ! | TTCATAGTTGAACACAATTA+AGG | + | chr2_2:44993155-44993174 | Msa0253300:intron | 25.0% |
| ! | TCATAGTTGAACACAATTAA+GGG | + | chr2_2:44993156-44993175 | Msa0253300:intron | 25.0% |
| !!! | TCTACAAAACAACTAGTTTT+CGG | - | chr2_2:44993269-44993288 | None:intergenic | 25.0% |
| ! | TATGAGTATGATCATGTTAA+AGG | - | chr2_2:44993363-44993382 | None:intergenic | 25.0% |
| ! | AAATTAAAACATACCTTCAC+CGG | - | chr2_2:44993490-44993509 | None:intergenic | 25.0% |
| !!! | GAAGGTATGTTTTAATTTGA+TGG | + | chr2_2:44993492-44993511 | Msa0253300:intron | 25.0% |
| !! | ATTCTTCTTTTTATAGAAGG+TGG | + | chr2_2:44993580-44993599 | Msa0253300:intron | 25.0% |
| ! | ACAAAAAGTTATACCTAATG+AGG | - | chr2_2:44993668-44993687 | None:intergenic | 25.0% |
| !! | ATGAAATAAAGAGGTATGAA+GGG | - | chr2_2:44993814-44993833 | None:intergenic | 25.0% |
| !! | TATGAAATAAAGAGGTATGA+AGG | - | chr2_2:44993815-44993834 | None:intergenic | 25.0% |
| !!! | AAGAAATTAATGATGGATAG+TGG | + | chr2_2:44993858-44993877 | Msa0253300:three_prime_UTR | 25.0% |
| ! | TCATGGTGTAAAAATAGAAT+AGG | + | chr2_2:44993881-44993900 | Msa0253300:three_prime_UTR | 25.0% |
| TGAATGTAAGAAAAGGGATT+AGG | + | chr2_2:44989036-44989055 | Msa0253300:five_prime_UTR | 30.0% | |
| !!! | TTCACTATTTTTGGAGTATC+GGG | - | chr2_2:44989747-44989766 | None:intergenic | 30.0% |
| ATTGGTATCAAATACTTGTC+TGG | - | chr2_2:44989778-44989797 | None:intergenic | 30.0% | |
| AAGAACAGATAAAGAGAAGA+AGG | - | chr2_2:44990201-44990220 | None:intergenic | 30.0% | |
| ATCTGTTCTTCTCTCTAATA+AGG | + | chr2_2:44990211-44990230 | Msa0253300:intron | 30.0% | |
| !! | CCGGAATTTTGAAAATTTTC+TGG | + | chr2_2:44990486-44990505 | Msa0253300:intron | 30.0% |
| TGATCTACTAAGTCTATGTT+TGG | - | chr2_2:44990632-44990651 | None:intergenic | 30.0% | |
| TGAGACTACTCAAAATTTAG+TGG | - | chr2_2:44990860-44990879 | None:intergenic | 30.0% | |
| !! | AATTTTGAGTAGTCTCAATC+GGG | + | chr2_2:44990863-44990882 | Msa0253300:intron | 30.0% |
| !! | TTTCACTTTTGCAGTATACT+TGG | + | chr2_2:44990988-44991007 | Msa0253300:intron | 30.0% |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr2_2:44991087-44991106 | None:intergenic | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | + | chr2_2:44991219-44991238 | Msa0253300:intron | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | + | chr2_2:44991220-44991239 | Msa0253300:intron | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | + | chr2_2:44991221-44991240 | Msa0253300:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr2_2:44991087-44991106 | None:intergenic | 30.0% | |
| GCGTGATTACATTTAAATGA+CGG | + | chr2_2:44991377-44991396 | Msa0253300:intron | 30.0% | |
| !!! | AATCAGAATTTTGGTTTGCA+GGG | - | chr2_2:44991506-44991525 | None:intergenic | 30.0% |
| !!! | TAATCAGAATTTTGGTTTGC+AGG | - | chr2_2:44991507-44991526 | None:intergenic | 30.0% |
| TTCTAACTGATATAGTTGCA+AGG | + | chr2_2:44991547-44991566 | Msa0253300:intron | 30.0% | |
| TTAGCAGAAAATTCTCAAGT+AGG | - | chr2_2:44991854-44991873 | None:intergenic | 30.0% | |
| ! | TTGAGAATTTTCTGCTAACA+TGG | + | chr2_2:44991856-44991875 | Msa0253300:intron | 30.0% |
| ATAGAGGAAAACAAAGACAT+TGG | + | chr2_2:44991930-44991949 | Msa0253300:CDS | 30.0% | |
| !! | TATGAAAAGAACCTGCTTTT+GGG | - | chr2_2:44992003-44992022 | None:intergenic | 30.0% |
| ! | ATATGAAAAGAACCTGCTTT+TGG | - | chr2_2:44992004-44992023 | None:intergenic | 30.0% |
| CGAAGTTTATGAAATCAAGA+CGG | + | chr2_2:44992264-44992283 | Msa0253300:intron | 30.0% | |
| ! | TGACATTTAAATTTTGTGCC+AGG | + | chr2_2:44992344-44992363 | Msa0253300:intron | 30.0% |
| !! | TAGGTGCTATTTAACAACAT+TGG | - | chr2_2:44992474-44992493 | None:intergenic | 30.0% |
| !! | TGATTTGTTCAAATTCCACT+AGG | - | chr2_2:44992511-44992530 | None:intergenic | 30.0% |
| TACCAAATGCTGTCAAATAA+CGG | + | chr2_2:44992557-44992576 | Msa0253300:intron | 30.0% | |
| ! | TTGATAATAACTGTTCTGCT+GGG | + | chr2_2:44992820-44992839 | Msa0253300:intron | 30.0% |
| ! | TAGCTATGTTAGCTTATCTA+TGG | + | chr2_2:44992903-44992922 | Msa0253300:intron | 30.0% |
| ! | AGCTATGTTAGCTTATCTAT+GGG | + | chr2_2:44992904-44992923 | Msa0253300:intron | 30.0% |
| !! | TCTCCGTTTTTCAAAAGAAA+TGG | + | chr2_2:44992998-44993017 | Msa0253300:intron | 30.0% |
| AATAATAAATACTCCATCGG+TGG | - | chr2_2:44993110-44993129 | None:intergenic | 30.0% | |
| !! | GAAAACTAGTTGTTTTGTAG+AGG | + | chr2_2:44993268-44993287 | Msa0253300:intron | 30.0% |
| !!! | ATATTGCTGCTTTTACTCAT+TGG | - | chr2_2:44993632-44993651 | None:intergenic | 30.0% |
| TATTGTTCTGATACCTCATT+AGG | + | chr2_2:44993652-44993671 | Msa0253300:three_prime_UTR | 30.0% | |
| GACACATGAAGATTGAGAAA+AGG | - | chr2_2:44989220-44989239 | None:intergenic | 35.0% | |
| GGCTAAAAAAGAAGAATGTG+TGG | - | chr2_2:44989545-44989564 | None:intergenic | 35.0% | |
| !!! | TCACTATTTTTGGAGTATCG+GGG | - | chr2_2:44989746-44989765 | None:intergenic | 35.0% |
| !!! | GAGGAACCCTAATTTTTTTG+GGG | - | chr2_2:44990016-44990035 | None:intergenic | 35.0% |
| !!! | CGAGGAACCCTAATTTTTTT+GGG | - | chr2_2:44990017-44990036 | None:intergenic | 35.0% |
| !!! | ACGAGGAACCCTAATTTTTT+TGG | - | chr2_2:44990018-44990037 | None:intergenic | 35.0% |
| TCAAAATTCCGGATACGATA+CGG | - | chr2_2:44990478-44990497 | None:intergenic | 35.0% | |
| TTATCGTATCGTATCCGTAT+CGG | + | chr2_2:44990514-44990533 | Msa0253300:intron | 35.0% | |
| TTAGTAGATCACTTGTAAGC+TGG | + | chr2_2:44990641-44990660 | Msa0253300:intron | 35.0% | |
| ! | TTTGAGGTAGCATTGTTCAT+TGG | + | chr2_2:44990674-44990693 | Msa0253300:intron | 35.0% |
| TTTGTTTGAGAATCCAGTGT+GGG | - | chr2_2:44990958-44990977 | None:intergenic | 35.0% | |
| !! | TTTTGTTTGAGAATCCAGTG+TGG | - | chr2_2:44990959-44990978 | None:intergenic | 35.0% |
| CTAACTCATCCTTACAAAAC+CGG | + | chr2_2:44991040-44991059 | Msa0253300:intron | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr2_2:44991084-44991103 | None:intergenic | 35.0% | |
| GATACCATGTTGAAATTTGG+GGG | + | chr2_2:44991222-44991241 | Msa0253300:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | + | chr2_2:44991040-44991059 | Msa0253300:intron | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr2_2:44991084-44991103 | None:intergenic | 35.0% | |
| CTGCATACATTGAGATCAAT+TGG | - | chr2_2:44991430-44991449 | None:intergenic | 35.0% | |
| ! | GATATAGTTGCAAGGTGTTT+AGG | + | chr2_2:44991555-44991574 | Msa0253300:intron | 35.0% |
| AACAAATAGAAAGACCAGCA+TGG | - | chr2_2:44991622-44991641 | None:intergenic | 35.0% | |
| AAATTCTCAAGTAGGTAGCT+TGG | - | chr2_2:44991846-44991865 | None:intergenic | 35.0% | |
| ! | TGCAGTATTTTACGCTCTAA+AGG | + | chr2_2:44991893-44991912 | Msa0253300:intron | 35.0% |
| AAACAAAGACATTGGACAGA+TGG | + | chr2_2:44991938-44991957 | Msa0253300:CDS | 35.0% | |
| !! | ATGAAAAGAACCTGCTTTTG+GGG | - | chr2_2:44992002-44992021 | None:intergenic | 35.0% |
| CACGAGTTTATAAACCTTGT+AGG | + | chr2_2:44992129-44992148 | Msa0253300:intron | 35.0% | |
| GAGTTTATAAACCTTGTAGG+AGG | + | chr2_2:44992132-44992151 | Msa0253300:intron | 35.0% | |
| !! | CTTTAAAGTTTCCTCCTACA+AGG | - | chr2_2:44992146-44992165 | None:intergenic | 35.0% |
| ! | GAAATAAGTGGTGGCTTTTT+GGG | - | chr2_2:44992190-44992209 | None:intergenic | 35.0% |
| CTAGGCTATAGCATTACTAT+AGG | - | chr2_2:44992493-44992512 | None:intergenic | 35.0% | |
| ATAGTAATGCTATAGCCTAG+TGG | + | chr2_2:44992493-44992512 | Msa0253300:intron | 35.0% | |
| AACCGTTATTTGACAGCATT+TGG | - | chr2_2:44992562-44992581 | None:intergenic | 35.0% | |
| CAATTGCAGATCATGGAAAA+TGG | - | chr2_2:44992631-44992650 | None:intergenic | 35.0% | |
| GTATTGTCAATTGCAGATCA+TGG | - | chr2_2:44992638-44992657 | None:intergenic | 35.0% | |
| ! | CTTGATAATAACTGTTCTGC+TGG | + | chr2_2:44992819-44992838 | Msa0253300:intron | 35.0% |
| ! | TCGACGCAAACTATTTTACT+AGG | - | chr2_2:44992975-44992994 | None:intergenic | 35.0% |
| TTGTGTTCAACTATGAAGGT+TGG | - | chr2_2:44993152-44993171 | None:intergenic | 35.0% | |
| ! | GATCATGTTAAAGGCACATT+TGG | - | chr2_2:44993354-44993373 | None:intergenic | 35.0% |
| ! | AGAAACTGTAGTAATGGGAA+GGG | - | chr2_2:44993534-44993553 | None:intergenic | 35.0% |
| TGCTGAGAAACTGTAGTAAT+GGG | - | chr2_2:44993539-44993558 | None:intergenic | 35.0% | |
| ATGCTGAGAAACTGTAGTAA+TGG | - | chr2_2:44993540-44993559 | None:intergenic | 35.0% | |
| ! | ATAAAGAGGTATGAAGGGAA+GGG | - | chr2_2:44993809-44993828 | None:intergenic | 35.0% |
| ! | AATAAAGAGGTATGAAGGGA+AGG | - | chr2_2:44993810-44993829 | None:intergenic | 35.0% |
| !! | TTAATGATGGATAGTGGTCA+TGG | + | chr2_2:44993864-44993883 | Msa0253300:three_prime_UTR | 35.0% |
| GAAGAAGAAGAAGAACTGAC+CGG | - | chr2_2:44989170-44989189 | None:intergenic | 40.0% | |
| !! | AACGTAACGGTTTTGATCAG+AGG | - | chr2_2:44989420-44989439 | None:intergenic | 40.0% |
| TTGGTTATGAAGCAGTGAGA+TGG | - | chr2_2:44989499-44989518 | None:intergenic | 40.0% | |
| TGATGTAAAACTCCGCGTAA+AGG | + | chr2_2:44989669-44989688 | Msa0253300:intron | 40.0% | |
| ATTAGATCAACGCCTTTACG+CGG | - | chr2_2:44989684-44989703 | None:intergenic | 40.0% | |
| !! | TACGAAAGAAGTATCGGTGT+CGG | - | chr2_2:44989903-44989922 | None:intergenic | 40.0% |
| !! | CGGTGGTAATGGTTAGAAAA+GGG | - | chr2_2:44990062-44990081 | None:intergenic | 40.0% |
| !! | TCGGTGGTAATGGTTAGAAA+AGG | - | chr2_2:44990063-44990082 | None:intergenic | 40.0% |
| GATGTTGAGATTGGGTCAAT+CGG | - | chr2_2:44990082-44990101 | None:intergenic | 40.0% | |
| GTGATGCTGATGTTGAGATT+GGG | - | chr2_2:44990090-44990109 | None:intergenic | 40.0% | |
| AGTGATGCTGATGTTGAGAT+TGG | - | chr2_2:44990091-44990110 | None:intergenic | 40.0% | |
| TATCGTATCGTATCCGTATC+GGG | + | chr2_2:44990515-44990534 | Msa0253300:intron | 40.0% | |
| TCTACTAGAATATGCTCGAC+AGG | + | chr2_2:44990574-44990593 | Msa0253300:intron | 40.0% | |
| ! | ACTTCAAGTTAGAAGGGCAT+TGG | + | chr2_2:44990907-44990926 | Msa0253300:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | - | chr2_2:44991042-44991061 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | chr2_2:44991105-44991124 | Msa0253300:intron | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | chr2_2:44991106-44991125 | Msa0253300:intron | 40.0% |
| TATCTATCCGATGTGGGAAT+TGG | + | chr2_2:44991112-44991131 | Msa0253300:intron | 40.0% | |
| ATCTATCCGATGTGGGAATT+GGG | + | chr2_2:44991113-44991132 | Msa0253300:intron | 40.0% | |
| GAAAAACCCAATTCCCACAT+CGG | - | chr2_2:44991122-44991141 | None:intergenic | 40.0% | |
| TCAGAGCTTGTCGAATTCAA+GGG | - | chr2_2:44991204-44991223 | None:intergenic | 40.0% | |
| ATCAGAGCTTGTCGAATTCA+AGG | - | chr2_2:44991205-44991224 | None:intergenic | 40.0% | |
| TTAGCCCCCAAATTTCAACA+TGG | - | chr2_2:44991229-44991248 | None:intergenic | 40.0% | |
| ! | AGAGTCTTATCTATCCGATG+TGG | + | chr2_2:44991105-44991124 | Msa0253300:intron | 40.0% |
| ! | GAGTCTTATCTATCCGATGT+GGG | + | chr2_2:44991106-44991125 | Msa0253300:intron | 40.0% |
| ! | AGTCTTATCTATCCGATGTG+GGG | + | chr2_2:44991107-44991126 | Msa0253300:intron | 40.0% |
| CGTTCTGCTTATATCTCCTT+TGG | + | chr2_2:44991803-44991822 | Msa0253300:intron | 40.0% | |
| AATACTGCAGATGCAACAAC+AGG | - | chr2_2:44991882-44991901 | None:intergenic | 40.0% | |
| GGATCACATGTCAAACATAG+AGG | + | chr2_2:44991914-44991933 | Msa0253300:exon | 40.0% | |
| ! | GGAAATAAGTGGTGGCTTTT+TGG | - | chr2_2:44992191-44992210 | None:intergenic | 40.0% |
| AAAGCCACCACTTATTTCCA+AGG | + | chr2_2:44992192-44992211 | Msa0253300:CDS | 40.0% | |
| TGTACCTTGGAAATAAGTGG+TGG | - | chr2_2:44992199-44992218 | None:intergenic | 40.0% | |
| TGGTGTACCTTGGAAATAAG+TGG | - | chr2_2:44992202-44992221 | None:intergenic | 40.0% | |
| GCAATGCACACGTGAATATT+TGG | + | chr2_2:44992292-44992311 | Msa0253300:intron | 40.0% | |
| TTACTTCGATTCTGCGGATT+GGG | + | chr2_2:44992380-44992399 | Msa0253300:intron | 40.0% | |
| CTGTCAAATAACGGTTGTAG+CGG | + | chr2_2:44992566-44992585 | Msa0253300:intron | 40.0% | |
| TTGCAGATCATGGAAAATGG+CGG | - | chr2_2:44992628-44992647 | None:intergenic | 40.0% | |
| TATCCTCATGTGAAACAGCA+AGG | + | chr2_2:44992684-44992703 | Msa0253300:intron | 40.0% | |
| GTGAATTGCTTATTGCCTGA+TGG | + | chr2_2:44992842-44992861 | Msa0253300:intron | 40.0% | |
| GTCAAAACTCAAGAACCATC+AGG | - | chr2_2:44992860-44992879 | None:intergenic | 40.0% | |
| GTGTTTGACAAAGTTGTGCT+TGG | + | chr2_2:44993402-44993421 | Msa0253300:intron | 40.0% | |
| TAAAACATACCTTCACCGGA+AGG | - | chr2_2:44993486-44993505 | None:intergenic | 40.0% | |
| ! | AAACTGTAGTAATGGGAAGG+GGG | - | chr2_2:44993532-44993551 | None:intergenic | 40.0% |
| ! | GAAACTGTAGTAATGGGAAG+GGG | - | chr2_2:44993533-44993552 | None:intergenic | 40.0% |
| ! | GAGAAACTGTAGTAATGGGA+AGG | - | chr2_2:44993535-44993554 | None:intergenic | 40.0% |
| ! | TAAAGAGGTATGAAGGGAAG+GGG | - | chr2_2:44993808-44993827 | None:intergenic | 40.0% |
| !! | ACGGTTTTGATCAGAGGTGT+CGG | - | chr2_2:44989414-44989433 | None:intergenic | 45.0% |
| TGAAGCAGTGAGATGGACAT+CGG | - | chr2_2:44989492-44989511 | None:intergenic | 45.0% | |
| CGGAACTTATCGGGACATAT+TGG | - | chr2_2:44989796-44989815 | None:intergenic | 45.0% | |
| ! | TCTGCGTAACGGAACTTATC+GGG | - | chr2_2:44989805-44989824 | None:intergenic | 45.0% |
| ! | CTCTGCGTAACGGAACTTAT+CGG | - | chr2_2:44989806-44989825 | None:intergenic | 45.0% |
| ! | TCCGTTACGCAGAGAAGTAT+CGG | + | chr2_2:44989812-44989831 | Msa0253300:intron | 45.0% |
| TAGCTGTATCCGACACGTAT+TGG | - | chr2_2:44989871-44989890 | None:intergenic | 45.0% | |
| ATTGGGTCAATCGGTGGTAA+TGG | - | chr2_2:44990073-44990092 | None:intergenic | 45.0% | |
| ATTGCCTCCATCAACAGCTT+CGG | + | chr2_2:44990112-44990131 | Msa0253300:intron | 45.0% | |
| ATCGTATCGTATCCGTATCG+GGG | + | chr2_2:44990516-44990535 | Msa0253300:intron | 45.0% | |
| AGCTGGATAGCAGTTCTTTG+AGG | + | chr2_2:44990658-44990677 | Msa0253300:intron | 45.0% | |
| TATTTCCCATTTGCCCACAC+TGG | + | chr2_2:44990942-44990961 | Msa0253300:intron | 45.0% | |
| AGAATCCAGTGTGGGCAAAT+GGG | - | chr2_2:44990950-44990969 | None:intergenic | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr2_2:44991052-44991071 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr2_2:44991049-44991068 | Msa0253300:intron | 45.0% |
| TTGGTGCGTGAATATGTAGG+TGG | + | chr2_2:44991178-44991197 | Msa0253300:intron | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr2_2:44991052-44991071 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr2_2:44991049-44991068 | Msa0253300:intron | 45.0% |
| TATCTATCCGATGTGGGGAT+TGG | + | chr2_2:44991317-44991336 | Msa0253300:intron | 45.0% | |
| ATCTATCCGATGTGGGGATT+GGG | + | chr2_2:44991318-44991337 | Msa0253300:intron | 45.0% | |
| GAAAAACCCAATCCCCACAT+CGG | - | chr2_2:44991327-44991346 | None:intergenic | 45.0% | |
| ! | TGGTTTGCAGGGTAAAAGAG+AGG | - | chr2_2:44991495-44991514 | None:intergenic | 45.0% |
| !! | GTTTGTTGTACTGTCCATGC+TGG | + | chr2_2:44991605-44991624 | Msa0253300:intron | 45.0% |
| ! | GTAGCTTGGTGGTAAGCTAA+GGG | - | chr2_2:44991832-44991851 | None:intergenic | 45.0% |
| TTCTCAAGTAGGTAGCTTGG+TGG | - | chr2_2:44991843-44991862 | None:intergenic | 45.0% | |
| AGACATTGGACAGATGGATG+TGG | + | chr2_2:44991944-44991963 | Msa0253300:CDS | 45.0% | |
| ATGGATGTGGATGCATCTGA+TGG | + | chr2_2:44991957-44991976 | Msa0253300:CDS | 45.0% | |
| TGGATGTGGATGCATCTGAT+GGG | + | chr2_2:44991958-44991977 | Msa0253300:CDS | 45.0% | |
| CAGAAATCTGCATGCGTGTA+CGG | - | chr2_2:44992225-44992244 | None:intergenic | 45.0% | |
| AATCGAAGTAAGCACGCTCA+TGG | - | chr2_2:44992371-44992390 | None:intergenic | 45.0% | |
| CTTACTTCGATTCTGCGGAT+TGG | + | chr2_2:44992379-44992398 | Msa0253300:intron | 45.0% | |
| GCTGTATCACTTTCGCATAG+AGG | + | chr2_2:44992590-44992609 | Msa0253300:intron | 45.0% | |
| CAAGGTGGTAGTAAGCCTAA+GGG | + | chr2_2:44992702-44992721 | Msa0253300:intron | 45.0% | |
| ! | TGGCAACGTTGCTTTCTTTG+TGG | + | chr2_2:44992796-44992815 | Msa0253300:intron | 45.0% |
| !! | TTGACCTGCAGTTTTGCTGT+AGG | + | chr2_2:44993745-44993764 | Msa0253300:three_prime_UTR | 45.0% |
| !! | TGACCTGCAGTTTTGCTGTA+GGG | + | chr2_2:44993746-44993765 | Msa0253300:three_prime_UTR | 45.0% |
| TATGAAGGGAAGGGGAAGAA+GGG | - | chr2_2:44993800-44993819 | None:intergenic | 45.0% | |
| !! | TCAAAAAAATAAATATTAAT+TGG | - | chr2_2:44989838-44989857 | None:intergenic | 5.0% |
| AGAACTGACCGGAGATGTGA+GGG | - | chr2_2:44989159-44989178 | None:intergenic | 50.0% | |
| AAGAACTGACCGGAGATGTG+AGG | - | chr2_2:44989160-44989179 | None:intergenic | 50.0% | |
| GGGGCTTCACAAATGACTAG+AGG | - | chr2_2:44989727-44989746 | None:intergenic | 50.0% | |
| GCCGATACTTCTCTGCGTAA+CGG | - | chr2_2:44989816-44989835 | None:intergenic | 50.0% | |
| GCTATAGCTCAGTAGTGACG+AGG | - | chr2_2:44990035-44990054 | None:intergenic | 50.0% | |
| GTTGAGATTGGGTCAATCGG+TGG | - | chr2_2:44990079-44990098 | None:intergenic | 50.0% | |
| GAACTCTCCGAAGCTGTTGA+TGG | - | chr2_2:44990122-44990141 | None:intergenic | 50.0% | |
| TATCGAGGCCGTATCGTATC+CGG | + | chr2_2:44990467-44990486 | Msa0253300:intron | 50.0% | |
| CTAGCTATGAAGCCCCGATA+CGG | - | chr2_2:44990531-44990550 | None:intergenic | 50.0% | |
| GAGAATCCAGTGTGGGCAAA+TGG | - | chr2_2:44990951-44990970 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr2_2:44991054-44991073 | Msa0253300:intron | 50.0% |
| GCAATCCTCACCTTACAAGC+CGG | - | chr2_2:44991062-44991081 | None:intergenic | 50.0% | |
| !! | GGCTTGGTGCGTGAATATGT+AGG | + | chr2_2:44991175-44991194 | Msa0253300:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr2_2:44991054-44991073 | Msa0253300:intron | 50.0% |
| GCAATCCTCACCTTACAAGC+CGG | - | chr2_2:44991062-44991081 | None:intergenic | 50.0% | |
| GGTAAGCTAAGGGACACCAA+AGG | - | chr2_2:44991822-44991841 | None:intergenic | 50.0% | |
| ! | GGTAGCTTGGTGGTAAGCTA+AGG | - | chr2_2:44991833-44991852 | None:intergenic | 50.0% |
| !!! | AGAACCTGCTTTTGGGGTGA+TGG | - | chr2_2:44991996-44992015 | None:intergenic | 50.0% |
| AAATCTGCATGCGTGTACGG+TGG | - | chr2_2:44992222-44992241 | None:intergenic | 50.0% | |
| GCGTGCTTACTTCGATTCTG+CGG | + | chr2_2:44992374-44992393 | Msa0253300:intron | 50.0% | |
| !! | GATTCTGCGGATTGGGCATT+GGG | + | chr2_2:44992387-44992406 | Msa0253300:intron | 50.0% |
| !! | GGCATTGGGAAAGGTACTTC+TGG | + | chr2_2:44992401-44992420 | Msa0253300:intron | 50.0% |
| !! | CCACCTTGCTGTTTCACATG+AGG | - | chr2_2:44992690-44992709 | None:intergenic | 50.0% |
| CCTCATGTGAAACAGCAAGG+TGG | + | chr2_2:44992687-44992706 | Msa0253300:intron | 50.0% | |
| GCAAGGTGGTAGTAAGCCTA+AGG | + | chr2_2:44992701-44992720 | Msa0253300:intron | 50.0% | |
| TAAGCCTAAGGGACCACTTG+AGG | + | chr2_2:44992713-44992732 | Msa0253300:intron | 50.0% | |
| GGTGGAAGCTTCAATCCAAC+TGG | - | chr2_2:44993092-44993111 | None:intergenic | 50.0% | |
| TGGATTGAAGCTTCCACCGA+TGG | + | chr2_2:44993094-44993113 | Msa0253300:intron | 50.0% | |
| ! | TAACGTGTTTGCTGCTGCGT+TGG | - | chr2_2:44993444-44993463 | None:intergenic | 50.0% |
| ! | AAGGAGCGTAAGGGGATTTC+CGG | - | chr2_2:44993467-44993486 | None:intergenic | 50.0% |
| AAATCCCCTTACGCTCCTTC+CGG | + | chr2_2:44993468-44993487 | Msa0253300:CDS | 50.0% | |
| !! | AGGTGGAAGTGTTCCATCTG+AGG | + | chr2_2:44993597-44993616 | Msa0253300:CDS | 50.0% |
| TTGGAAGCTGCATCCTCAGA+TGG | - | chr2_2:44993613-44993632 | None:intergenic | 50.0% | |
| AGTCCCTACAGCAAAACTGC+AGG | - | chr2_2:44993752-44993771 | None:intergenic | 50.0% | |
| GTATGAAGGGAAGGGGAAGA+AGG | - | chr2_2:44993801-44993820 | None:intergenic | 50.0% | |
| GAAGCAGCAACCGTGATGAG+CGG | - | chr2_2:44989137-44989156 | None:intergenic | 55.0% | |
| ! | TGCTGCTTCCCTCACATCTC+CGG | + | chr2_2:44989148-44989167 | Msa0253300:five_prime_UTR | 55.0% |
| ATCGGACACGACACTGACAC+CGG | - | chr2_2:44989474-44989493 | None:intergenic | 55.0% | |
| ! | CTCTCCGAAGCTGTTGATGG+AGG | - | chr2_2:44990119-44990138 | None:intergenic | 55.0% |
| !! | CACCAAGCCCAAAGAGTGCT+GGG | - | chr2_2:44991164-44991183 | None:intergenic | 55.0% |
| CATGCCATCACCCCAAAAGC+AGG | + | chr2_2:44991989-44992008 | Msa0253300:CDS | 55.0% | |
| AGTAAGCACGCTCATGGTCC+TGG | - | chr2_2:44992365-44992384 | None:intergenic | 55.0% | |
| !! | CGATTCTGCGGATTGGGCAT+TGG | + | chr2_2:44992386-44992405 | Msa0253300:intron | 55.0% |
| !! | TGCGGATTGGGCATTGGGAA+AGG | + | chr2_2:44992392-44992411 | Msa0253300:intron | 55.0% |
| AGAGCCTCAAGTGGTCCCTT+AGG | - | chr2_2:44992720-44992739 | None:intergenic | 55.0% | |
| AGGGACCACTTGAGGCTCTT+CGG | + | chr2_2:44992721-44992740 | Msa0253300:intron | 55.0% | |
| TTAGGCCGAAGAGCCTCAAG+TGG | - | chr2_2:44992729-44992748 | None:intergenic | 55.0% | |
| GGCTCTTCGGCCTAAACTAC+AGG | + | chr2_2:44992734-44992753 | Msa0253300:intron | 55.0% | |
| CGCAGCAGCAAACACGTTAC+CGG | + | chr2_2:44993445-44993464 | Msa0253300:CDS | 55.0% | |
| ! | TTCACCGGAAGGAGCGTAAG+GGG | - | chr2_2:44993475-44993494 | None:intergenic | 55.0% |
| ! | CTTCACCGGAAGGAGCGTAA+GGG | - | chr2_2:44993476-44993495 | None:intergenic | 55.0% |
| CTCAACACCGACCCGACGTT+CGG | + | chr2_2:44989107-44989126 | Msa0253300:five_prime_UTR | 60.0% | |
| !! | ATGAGCGGAGCACCGAACGT+CGG | - | chr2_2:44989122-44989141 | None:intergenic | 60.0% |
| !! | GTTCGGTGCTCCGCTCATCA+CGG | + | chr2_2:44989124-44989143 | Msa0253300:five_prime_UTR | 60.0% |
| !! | AAAGAGTGCTGGGCGTGAGG+GGG | - | chr2_2:44991154-44991173 | None:intergenic | 60.0% |
| !! | CAAAGAGTGCTGGGCGTGAG+GGG | - | chr2_2:44991155-44991174 | None:intergenic | 60.0% |
| !! | CCAAAGAGTGCTGGGCGTGA+GGG | - | chr2_2:44991156-44991175 | None:intergenic | 60.0% |
| CCTCACGCCCAGCACTCTTT+GGG | + | chr2_2:44991154-44991173 | Msa0253300:intron | 60.0% | |
| ! | GCACCAAGCCCAAAGAGTGC+TGG | - | chr2_2:44991165-44991184 | None:intergenic | 60.0% |
| GCGTGTACGGTGGTGTACCT+TGG | - | chr2_2:44992212-44992231 | None:intergenic | 60.0% | |
| ! | CCTTCACCGGAAGGAGCGTA+AGG | - | chr2_2:44993477-44993496 | None:intergenic | 60.0% |
| CCTTACGCTCCTTCCGGTGA+AGG | + | chr2_2:44993474-44993493 | Msa0253300:CDS | 60.0% | |
| !! | TGAGCGGAGCACCGAACGTC+GGG | - | chr2_2:44989121-44989140 | None:intergenic | 65.0% |
| GGACACGACACTGACACCGG+CGG | - | chr2_2:44989471-44989490 | None:intergenic | 65.0% | |
| ! | GGGCGTGAGGGGGGTGTATT+GGG | - | chr2_2:44991144-44991163 | None:intergenic | 65.0% |
| ! | TGGGCGTGAGGGGGGTGTAT+TGG | - | chr2_2:44991145-44991164 | None:intergenic | 65.0% |
| !! | AAGAGTGCTGGGCGTGAGGG+GGG | - | chr2_2:44991153-44991172 | None:intergenic | 65.0% |
| CCCTCACGCCCAGCACTCTT+TGG | + | chr2_2:44991153-44991172 | Msa0253300:intron | 65.0% | |
| !! | CCCAAAGAGTGCTGGGCGTG+AGG | - | chr2_2:44991157-44991176 | None:intergenic | 65.0% |
| CGCCCAGCACTCTTTGGGCT+TGG | + | chr2_2:44991159-44991178 | Msa0253300:intron | 65.0% | |
| !! | CGGAGCACCGAACGTCGGGT+CGG | - | chr2_2:44989117-44989136 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 44989029 | 44993955 | 44989029 | ID=Msa0253300;Name=Msa0253300 |
| chr2_2 | mRNA | 44989029 | 44993955 | 44989029 | ID=Msa0253300-mRNA-1;Parent=Msa0253300;Name=Msa0253300-mRNA-1;_AED=0.07;_eAED=0.07;_QI=164|0.75|1|1|0.75|0.6|5|316|83 |
| chr2_2 | exon | 44989029 | 44989169 | 44989029 | ID=Msa0253300-mRNA-1:exon:13865;Parent=Msa0253300-mRNA-1 |
| chr2_2 | exon | 44991898 | 44992010 | 44991898 | ID=Msa0253300-mRNA-1:exon:13866;Parent=Msa0253300-mRNA-1 |
| chr2_2 | exon | 44992151 | 44992213 | 44992151 | ID=Msa0253300-mRNA-1:exon:13867;Parent=Msa0253300-mRNA-1 |
| chr2_2 | exon | 44993441 | 44993495 | 44993441 | ID=Msa0253300-mRNA-1:exon:13868;Parent=Msa0253300-mRNA-1 |
| chr2_2 | exon | 44993596 | 44993955 | 44993596 | ID=Msa0253300-mRNA-1:exon:13869;Parent=Msa0253300-mRNA-1 |
| chr2_2 | five_prime_UTR | 44989029 | 44989169 | 44989029 | ID=Msa0253300-mRNA-1:five_prime_utr;Parent=Msa0253300-mRNA-1 |
| chr2_2 | five_prime_UTR | 44991898 | 44991920 | 44991898 | ID=Msa0253300-mRNA-1:five_prime_utr;Parent=Msa0253300-mRNA-1 |
| chr2_2 | CDS | 44991921 | 44992010 | 44991921 | ID=Msa0253300-mRNA-1:cds;Parent=Msa0253300-mRNA-1 |
| chr2_2 | CDS | 44992151 | 44992213 | 44992151 | ID=Msa0253300-mRNA-1:cds;Parent=Msa0253300-mRNA-1 |
| chr2_2 | CDS | 44993441 | 44993495 | 44993441 | ID=Msa0253300-mRNA-1:cds;Parent=Msa0253300-mRNA-1 |
| chr2_2 | CDS | 44993596 | 44993639 | 44993596 | ID=Msa0253300-mRNA-1:cds;Parent=Msa0253300-mRNA-1 |
| chr2_2 | three_prime_UTR | 44993640 | 44993955 | 44993640 | ID=Msa0253300-mRNA-1:three_prime_utr;Parent=Msa0253300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
