AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0389800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389800 MtrunA17_Chr3g0122371 97.561 123 3 0 1 123 1 123 1.48e-88 252
Msa0389800 MtrunA17_Chr8g0377491 90.244 123 12 0 1 123 1 123 1.13e-81 235
Msa0389800 MtrunA17_Chr2g0308331 80.851 94 12 1 1 94 1 88 2.46e-49 153
Msa0389800 MtrunA17_Chr7g0235151 35.246 122 71 5 3 119 12 130 3.73e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0389800 AT1G27970.1 82.114 123 22 0 1 123 4 126 5.30e-74 216
Msa0389800 AT1G27310.1 82.927 123 20 1 1 123 1 122 2.57e-73 214
Msa0389800 AT1G27970.2 81.356 118 22 0 1 118 4 121 1.22e-69 205
Msa0389800 AT1G11570.2 59.504 121 46 1 6 123 12 132 9.42e-47 147
Msa0389800 AT1G11570.3 59.504 121 46 1 6 123 33 153 1.24e-46 147
Msa0389800 AT1G11570.1 57.426 101 40 1 6 103 12 112 1.57e-34 116
Msa0389800 AT1G11570.4 57.426 101 40 1 6 103 33 133 2.59e-34 116
Msa0389800 AT5G48650.1 37.302 126 70 6 1 120 11 133 2.73e-12 62.4

Find 57 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAATTTGCATCTAAAATT+TGG 0.111315 3_2:+202745 Msa0389800:three_prime_UTR
CAGACATTTAAAATTAAAAT+TGG 0.120296 3_2:+202594 Msa0389800:three_prime_UTR
AGATGCAAATTGCATGAATA+TGG 0.182084 3_2:-202736 None:intergenic
CTTTGAAGGTCAGCAAATTA+TGG 0.205195 3_2:+200626 Msa0389800:CDS
AAAATTAAAATTGGGTCTTT+TGG 0.234324 3_2:+202603 Msa0389800:three_prime_UTR
TGTTGAAGATCAATGAATAT+TGG 0.239280 3_2:+202690 Msa0389800:three_prime_UTR
GTTGAAGATCAATGAATATT+GGG 0.271194 3_2:+202691 Msa0389800:three_prime_UTR
TTTGAAGGTCAGCAAATTAT+GGG 0.362536 3_2:+200627 Msa0389800:CDS
AATGCCTTTGACAATGCGTT+TGG 0.385167 3_2:-200525 None:intergenic
ATTGTGTTTAAACTCTTTGA+AGG 0.385926 3_2:+202661 Msa0389800:three_prime_UTR
CTCTATCTCACTCCTTGGCC+TGG 0.398404 3_2:-200441 None:intergenic
GGTTCTATGCTCACCTTTGA+AGG 0.402799 3_2:+200612 Msa0389800:CDS
CGTGTTGTTCGCCGGCGAGC+TGG 0.403242 3_2:-200776 None:intergenic
CGCATTGTCAAAGGCATTCG+TGG 0.412022 3_2:+200530 Msa0389800:CDS
CATAATTTGCTGACCTTCAA+AGG 0.412917 3_2:-200625 None:intergenic
GTTTAAACACAATTCTAAAC+AGG 0.413628 3_2:-202651 None:intergenic
AGACATTTAAAATTAAAATT+GGG 0.414797 3_2:+202595 Msa0389800:three_prime_UTR
CTTGCGGTGTTGGTATCAAA+TGG 0.429115 3_2:-202476 None:intergenic
TTGGTAGAGAGTGGCGAGAT+TGG 0.433392 3_2:-200586 None:intergenic
TGGTAGAGAGTGGCGAGATT+GGG 0.451654 3_2:-200585 None:intergenic
TTCTTCACGCATAGTTCAAA+CGG 0.464644 3_2:-202527 None:intergenic
TGATGGAGTGATGGCACTGC+TGG 0.466864 3_2:-200689 None:intergenic
AATTGACCTGACTGAATTTG+AGG 0.471209 3_2:-200800 None:intergenic
TTTGAGGGCGTGTTGTTCGC+CGG 0.484969 3_2:-200784 None:intergenic
TTGAAGATCAATGAATATTG+GGG 0.510000 3_2:+202692 Msa0389800:three_prime_UTR
GCGCTTATTTATAAGAAGCC+AGG 0.512620 3_2:+200423 Msa0389800:five_prime_UTR
ACCGTCGATTGTCAACCTTC+TGG 0.514517 3_2:+200714 Msa0389800:CDS
ATTGGGACGGTTGGTGTCGA+AGG 0.521383 3_2:-200568 None:intergenic
GAGTGATGGCACTGCTGGAA+AGG 0.524413 3_2:-200684 None:intergenic
TTGACAATCGACGGTGGTGA+TGG 0.528680 3_2:-200706 None:intergenic
TAATAGCTTCCTTGCGGTGT+TGG 0.531758 3_2:-202486 None:intergenic
ATTGACCTGACTGAATTTGA+GGG 0.536270 3_2:-200799 None:intergenic
AGTCTCTCTATCTCACTCCT+TGG 0.546043 3_2:-200446 None:intergenic
ATTTATAAGAAGCCAGGCCA+AGG 0.547142 3_2:+200429 Msa0389800:five_prime_UTR
ATGCCGCCGTTAGCGCCAGA+AGG 0.549119 3_2:-200729 None:intergenic
TGTCAACCTTCTGGCGCTAA+CGG 0.557071 3_2:+200723 Msa0389800:CDS
AGTGGCGAGATTGGGACGGT+TGG 0.563337 3_2:-200577 None:intergenic
GGGACGGTTGGTGTCGAAGG+TGG 0.565989 3_2:-200565 None:intergenic
AGGTGAGCATAGAACCATCT+TGG 0.568405 3_2:-200605 None:intergenic
CTCGCCACTCTCTACCAAGA+TGG 0.569246 3_2:+200591 Msa0389800:CDS
ACACGCCCTCAAATTCAGTC+AGG 0.570302 3_2:+200794 Msa0389800:CDS
CAGAGAAAGAGATCGTGTTA+CGG 0.571732 3_2:+200483 Msa0389800:five_prime_UTR
GGATCCAAACGCATTGTCAA+AGG 0.574827 3_2:+200521 Msa0389800:CDS
TTACGGCGGCGTAAGAGCGA+TGG 0.580005 3_2:+200500 Msa0389800:exon
AGTGGTAATCTCCAGCTCGC+CGG 0.581878 3_2:+200765 Msa0389800:CDS
AGTGATGGCACTGCTGGAAA+GGG 0.591260 3_2:-200683 None:intergenic
GGCATGCTTGTCTTTGTCAG+TGG 0.596448 3_2:+200747 Msa0389800:CDS
CATTTGATACCAACACCGCA+AGG 0.621557 3_2:+202477 Msa0389800:CDS
GCCAGAAGGTTGACAATCGA+CGG 0.623192 3_2:-200715 None:intergenic
AGAACCATCTTGGTAGAGAG+TGG 0.624728 3_2:-200595 None:intergenic
CGACGGTGGTGATGGAGTGA+TGG 0.635677 3_2:-200698 None:intergenic
AACACATAATAGCTTCCTTG+CGG 0.638641 3_2:-202492 None:intergenic
CAACCTTCTGGCGCTAACGG+CGG 0.643186 3_2:+200726 Msa0389800:CDS
AGAGAGTGGCGAGATTGGGA+CGG 0.652017 3_2:-200581 None:intergenic
AGAAAGAGATCGTGTTACGG+CGG 0.704735 3_2:+200486 Msa0389800:five_prime_UTR
TGAAGATCAATGAATATTGG+GGG 0.706123 3_2:+202693 Msa0389800:three_prime_UTR
AGAAGGTTGACAATCGACGG+TGG 0.721439 3_2:-200712 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTATTTGTTAATTTTA+GGG + chr3_2:200843-200862 Msa0389800:intron 10.0%
!!! AGACATTTAAAATTAAAATT+GGG + chr3_2:202595-202614 Msa0389800:three_prime_UTR 10.0%
!!! TTTTCTATTTGTTAATTTTA+GGG + chr3_2:200843-200862 Msa0389800:intron 10.0%
!!! AGACATTTAAAATTAAAATT+GGG + chr3_2:202595-202614 Msa0389800:three_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+AGG + chr3_2:201981-202000 Msa0389800:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+AGG + chr3_2:201981-202000 Msa0389800:intron 100.0%
!!! GTTTTCTATTTGTTAATTTT+AGG + chr3_2:200842-200861 Msa0389800:intron 15.0%
!!! TTTCATGATTAAGTTTTAAT+TGG + chr3_2:200917-200936 Msa0389800:intron 15.0%
!!! GTATTATCAATATTCTAAAA+TGG + chr3_2:201138-201157 Msa0389800:intron 15.0%
!!! ATTAACATTTTACAATTCTA+AGG - chr3_2:201165-201184 None:intergenic 15.0%
!! AGAATTGTAAAATGTTAATT+AGG + chr3_2:201166-201185 Msa0389800:intron 15.0%
!!! TTTTATTTTAGTGATCATTT+TGG + chr3_2:201419-201438 Msa0389800:intron 15.0%
!! TTGATATAATCAACAATTTA+AGG + chr3_2:201468-201487 Msa0389800:intron 15.0%
!! TGATATAATCAACAATTTAA+GGG + chr3_2:201469-201488 Msa0389800:intron 15.0%
!! TCCATCATAATAATAATAAT+AGG - chr3_2:201512-201531 None:intergenic 15.0%
!!! TATTATTATTATGATGGATT+TGG + chr3_2:201514-201533 Msa0389800:intron 15.0%
!! AATAATGAAATGATTAACTA+CGG + chr3_2:202111-202130 Msa0389800:intron 15.0%
!!! CAGACATTTAAAATTAAAAT+TGG + chr3_2:202594-202613 Msa0389800:three_prime_UTR 15.0%
!!! GTTTTCTATTTGTTAATTTT+AGG + chr3_2:200842-200861 Msa0389800:intron 15.0%
!!! TTTCATGATTAAGTTTTAAT+TGG + chr3_2:200917-200936 Msa0389800:intron 15.0%
!!! GTATTATCAATATTCTAAAA+TGG + chr3_2:201138-201157 Msa0389800:intron 15.0%
!!! ATTAACATTTTACAATTCTA+AGG - chr3_2:201165-201184 None:intergenic 15.0%
!! AGAATTGTAAAATGTTAATT+AGG + chr3_2:201166-201185 Msa0389800:intron 15.0%
!!! TTTTATTTTAGTGATCATTT+TGG + chr3_2:201419-201438 Msa0389800:intron 15.0%
!! TTGATATAATCAACAATTTA+AGG + chr3_2:201468-201487 Msa0389800:intron 15.0%
!! TGATATAATCAACAATTTAA+GGG + chr3_2:201469-201488 Msa0389800:intron 15.0%
!! TCCATCATAATAATAATAAT+AGG - chr3_2:201512-201531 None:intergenic 15.0%
!!! TATTATTATTATGATGGATT+TGG + chr3_2:201514-201533 Msa0389800:intron 15.0%
!! AATAATGAAATGATTAACTA+CGG + chr3_2:202111-202130 Msa0389800:intron 15.0%
!!! CAGACATTTAAAATTAAAAT+TGG + chr3_2:202594-202613 Msa0389800:three_prime_UTR 15.0%
!! CATGAAAAACTTAAATAACA+CGG - chr3_2:200904-200923 None:intergenic 20.0%
!! ATAATACCAATCAAATTTCA+GGG - chr3_2:201125-201144 None:intergenic 20.0%
!!! TGGAATATTGTTATTGTAAA+TGG + chr3_2:201439-201458 Msa0389800:intron 20.0%
!! GCCTATTATTATTATTATGA+TGG + chr3_2:201508-201527 Msa0389800:intron 20.0%
!!! TAGAGTGAAATTTCTAATTT+TGG + chr3_2:202212-202231 Msa0389800:intron 20.0%
!!! AAAATTAAAATTGGGTCTTT+TGG + chr3_2:202603-202622 Msa0389800:three_prime_UTR 20.0%
!! CATGAAAAACTTAAATAACA+CGG - chr3_2:200904-200923 None:intergenic 20.0%
!! ATAATACCAATCAAATTTCA+GGG - chr3_2:201125-201144 None:intergenic 20.0%
!!! TGGAATATTGTTATTGTAAA+TGG + chr3_2:201439-201458 Msa0389800:intron 20.0%
!! GCCTATTATTATTATTATGA+TGG + chr3_2:201508-201527 Msa0389800:intron 20.0%
!!! TAGAGTGAAATTTCTAATTT+TGG + chr3_2:202212-202231 Msa0389800:intron 20.0%
!!! AAAATTAAAATTGGGTCTTT+TGG + chr3_2:202603-202622 Msa0389800:three_prime_UTR 20.0%
!!! CATGATTAAGTTTTAATTGG+TGG + chr3_2:200920-200939 Msa0389800:intron 25.0%
! GATAATACCAATCAAATTTC+AGG - chr3_2:201126-201145 None:intergenic 25.0%
!! AATTAGGTTTTTCTATCTGT+TGG + chr3_2:201182-201201 Msa0389800:intron 25.0%
! TTGGAATGTCAAAATTACAT+AGG - chr3_2:201292-201311 None:intergenic 25.0%
! AACAATTTAAGGGACTAAAT+TGG + chr3_2:201479-201498 Msa0389800:intron 25.0%
! AAAACAACATTGATACAAAG+AGG - chr3_2:201607-201626 None:intergenic 25.0%
! TGATGTTGTTGAACATTTAT+TGG + chr3_2:201651-201670 Msa0389800:intron 25.0%
! GATGTTGTTGAACATTTATT+GGG + chr3_2:201652-201671 Msa0389800:intron 25.0%
! TGAACAAATCAAAGCATAAA+AGG - chr3_2:201759-201778 None:intergenic 25.0%
! CATATTAACTAGCATTAGAT+TGG - chr3_2:201782-201801 None:intergenic 25.0%
!!! AAATATTGGTTAACTTGTCA+GGG + chr3_2:201934-201953 Msa0389800:intron 25.0%
! AGTCTATAGCTATAAGAAAA+TGG + chr3_2:202141-202160 Msa0389800:intron 25.0%
! ATTTCACTCTAATCATGAAT+TGG - chr3_2:202203-202222 None:intergenic 25.0%
!! AGTTTTCCTCATATTGATAA+TGG + chr3_2:202235-202254 Msa0389800:intron 25.0%
! AAAACACCATTATCAATATG+AGG - chr3_2:202244-202263 None:intergenic 25.0%
! CTTCATATGTTACTGAAATT+TGG - chr3_2:202286-202305 None:intergenic 25.0%
! CAAATTTCAGTAACATATGA+AGG + chr3_2:202284-202303 Msa0389800:intron 25.0%
! TCTATCTGGACAATAATAAA+TGG - chr3_2:202329-202348 None:intergenic 25.0%
! GTTAAATCATCAATATCACT+TGG + chr3_2:202358-202377 Msa0389800:intron 25.0%
! GTTTAAACACAATTCTAAAC+AGG - chr3_2:202654-202673 None:intergenic 25.0%
! ATTGTGTTTAAACTCTTTGA+AGG + chr3_2:202661-202680 Msa0389800:three_prime_UTR 25.0%
! TGTTGAAGATCAATGAATAT+TGG + chr3_2:202690-202709 Msa0389800:three_prime_UTR 25.0%
! GTTGAAGATCAATGAATATT+GGG + chr3_2:202691-202710 Msa0389800:three_prime_UTR 25.0%
! TTGAAGATCAATGAATATTG+GGG + chr3_2:202692-202711 Msa0389800:three_prime_UTR 25.0%
!! TGCAATTTGCATCTAAAATT+TGG + chr3_2:202745-202764 Msa0389800:three_prime_UTR 25.0%
!!! CATGATTAAGTTTTAATTGG+TGG + chr3_2:200920-200939 Msa0389800:intron 25.0%
! GATAATACCAATCAAATTTC+AGG - chr3_2:201126-201145 None:intergenic 25.0%
!! AATTAGGTTTTTCTATCTGT+TGG + chr3_2:201182-201201 Msa0389800:intron 25.0%
! TTGGAATGTCAAAATTACAT+AGG - chr3_2:201292-201311 None:intergenic 25.0%
! AACAATTTAAGGGACTAAAT+TGG + chr3_2:201479-201498 Msa0389800:intron 25.0%
! AAAACAACATTGATACAAAG+AGG - chr3_2:201607-201626 None:intergenic 25.0%
! TGATGTTGTTGAACATTTAT+TGG + chr3_2:201651-201670 Msa0389800:intron 25.0%
! GATGTTGTTGAACATTTATT+GGG + chr3_2:201652-201671 Msa0389800:intron 25.0%
! TGAACAAATCAAAGCATAAA+AGG - chr3_2:201759-201778 None:intergenic 25.0%
! CATATTAACTAGCATTAGAT+TGG - chr3_2:201782-201801 None:intergenic 25.0%
!!! AAATATTGGTTAACTTGTCA+GGG + chr3_2:201934-201953 Msa0389800:intron 25.0%
! AGTCTATAGCTATAAGAAAA+TGG + chr3_2:202141-202160 Msa0389800:intron 25.0%
! ATTTCACTCTAATCATGAAT+TGG - chr3_2:202203-202222 None:intergenic 25.0%
!! AGTTTTCCTCATATTGATAA+TGG + chr3_2:202235-202254 Msa0389800:intron 25.0%
! AAAACACCATTATCAATATG+AGG - chr3_2:202244-202263 None:intergenic 25.0%
! CTTCATATGTTACTGAAATT+TGG - chr3_2:202286-202305 None:intergenic 25.0%
! CAAATTTCAGTAACATATGA+AGG + chr3_2:202284-202303 Msa0389800:intron 25.0%
! TCTATCTGGACAATAATAAA+TGG - chr3_2:202329-202348 None:intergenic 25.0%
! GTTAAATCATCAATATCACT+TGG + chr3_2:202358-202377 Msa0389800:intron 25.0%
! GTTTAAACACAATTCTAAAC+AGG - chr3_2:202654-202673 None:intergenic 25.0%
! ATTGTGTTTAAACTCTTTGA+AGG + chr3_2:202661-202680 Msa0389800:three_prime_UTR 25.0%
! TGTTGAAGATCAATGAATAT+TGG + chr3_2:202690-202709 Msa0389800:three_prime_UTR 25.0%
! GTTGAAGATCAATGAATATT+GGG + chr3_2:202691-202710 Msa0389800:three_prime_UTR 25.0%
! TTGAAGATCAATGAATATTG+GGG + chr3_2:202692-202711 Msa0389800:three_prime_UTR 25.0%
!! TGCAATTTGCATCTAAAATT+TGG + chr3_2:202745-202764 Msa0389800:three_prime_UTR 25.0%
TTTGAAGGTCAGCAAATTAT+GGG + chr3_2:200627-200646 Msa0389800:CDS 30.0%
! TTGCAACTTTATCTGGTTTA+GGG + chr3_2:201002-201021 Msa0389800:intron 30.0%
TCAAATTTCAGGGATCAAAT+TGG - chr3_2:201115-201134 None:intergenic 30.0%
TTTGATCCCTGAAATTTGAT+TGG + chr3_2:201116-201135 Msa0389800:intron 30.0%
TGTCATGTTAGAAATGCATT+AGG - chr3_2:201329-201348 None:intergenic 30.0%
TTCTAACATGACAAACGTAT+CGG + chr3_2:201336-201355 Msa0389800:intron 30.0%
AGTTAGATTCATCTCTTTGT+TGG - chr3_2:201382-201401 None:intergenic 30.0%
!!! AATGTTGTTTTCTCTAGTCT+AGG + chr3_2:201616-201635 Msa0389800:intron 30.0%
!!! ATGTTGTTTTCTCTAGTCTA+GGG + chr3_2:201617-201636 Msa0389800:intron 30.0%
! GAAATAACTAAGAAAGCACA+TGG - chr3_2:201835-201854 None:intergenic 30.0%
! AGTTATTTCACTCAGATTTC+AGG + chr3_2:201846-201865 Msa0389800:intron 30.0%
TATTTCGTATAGAAGTAGGA+TGG - chr3_2:201873-201892 None:intergenic 30.0%
TCACTATTTCGTATAGAAGT+AGG - chr3_2:201877-201896 None:intergenic 30.0%
!! CAAATATTGGTTAACTTGTC+AGG + chr3_2:201933-201952 Msa0389800:intron 30.0%
ATTGAGTTAGAGAAGAACAT+GGG + chr3_2:202072-202091 Msa0389800:intron 30.0%
! TGAAATTTGGTCTTTCTCTA+TGG - chr3_2:202273-202292 None:intergenic 30.0%
ATTTCAGTAACATATGAAGG+CGG + chr3_2:202287-202306 Msa0389800:intron 30.0%
TTAACAATCACAGTTCTATC+TGG - chr3_2:202343-202362 None:intergenic 30.0%
TGAAGATCAATGAATATTGG+GGG + chr3_2:202693-202712 Msa0389800:three_prime_UTR 30.0%
AGATGCAAATTGCATGAATA+TGG - chr3_2:202739-202758 None:intergenic 30.0%
TTTGAAGGTCAGCAAATTAT+GGG + chr3_2:200627-200646 Msa0389800:CDS 30.0%
! TTGCAACTTTATCTGGTTTA+GGG + chr3_2:201002-201021 Msa0389800:intron 30.0%
TCAAATTTCAGGGATCAAAT+TGG - chr3_2:201115-201134 None:intergenic 30.0%
TTTGATCCCTGAAATTTGAT+TGG + chr3_2:201116-201135 Msa0389800:intron 30.0%
TGTCATGTTAGAAATGCATT+AGG - chr3_2:201329-201348 None:intergenic 30.0%
TTCTAACATGACAAACGTAT+CGG + chr3_2:201336-201355 Msa0389800:intron 30.0%
AGTTAGATTCATCTCTTTGT+TGG - chr3_2:201382-201401 None:intergenic 30.0%
!!! AATGTTGTTTTCTCTAGTCT+AGG + chr3_2:201616-201635 Msa0389800:intron 30.0%
!!! ATGTTGTTTTCTCTAGTCTA+GGG + chr3_2:201617-201636 Msa0389800:intron 30.0%
! GAAATAACTAAGAAAGCACA+TGG - chr3_2:201835-201854 None:intergenic 30.0%
! AGTTATTTCACTCAGATTTC+AGG + chr3_2:201846-201865 Msa0389800:intron 30.0%
TATTTCGTATAGAAGTAGGA+TGG - chr3_2:201873-201892 None:intergenic 30.0%
TCACTATTTCGTATAGAAGT+AGG - chr3_2:201877-201896 None:intergenic 30.0%
!! CAAATATTGGTTAACTTGTC+AGG + chr3_2:201933-201952 Msa0389800:intron 30.0%
ATTGAGTTAGAGAAGAACAT+GGG + chr3_2:202072-202091 Msa0389800:intron 30.0%
! TGAAATTTGGTCTTTCTCTA+TGG - chr3_2:202273-202292 None:intergenic 30.0%
ATTTCAGTAACATATGAAGG+CGG + chr3_2:202287-202306 Msa0389800:intron 30.0%
TTAACAATCACAGTTCTATC+TGG - chr3_2:202343-202362 None:intergenic 30.0%
TGAAGATCAATGAATATTGG+GGG + chr3_2:202693-202712 Msa0389800:three_prime_UTR 30.0%
AGATGCAAATTGCATGAATA+TGG - chr3_2:202739-202758 None:intergenic 30.0%
!! CATAATTTGCTGACCTTCAA+AGG - chr3_2:200628-200647 None:intergenic 35.0%
! CTTTGAAGGTCAGCAAATTA+TGG + chr3_2:200626-200645 Msa0389800:CDS 35.0%
ATTGACCTGACTGAATTTGA+GGG - chr3_2:200802-200821 None:intergenic 35.0%
AATTGACCTGACTGAATTTG+AGG - chr3_2:200803-200822 None:intergenic 35.0%
! GTTGCAACTTTATCTGGTTT+AGG + chr3_2:201001-201020 Msa0389800:intron 35.0%
!! GTTAATAGTTTTGCTGTCGT+AGG + chr3_2:201067-201086 Msa0389800:intron 35.0%
CTGTCGTAGGATTTCAATAT+TGG + chr3_2:201080-201099 Msa0389800:intron 35.0%
TCATTGTTCATTTGCATGCT+TGG + chr3_2:201234-201253 Msa0389800:intron 35.0%
TTAGGAGCTAAGTGTGTATT+TGG - chr3_2:201311-201330 None:intergenic 35.0%
GATACAAAGAGGAATCTACA+TGG - chr3_2:201596-201615 None:intergenic 35.0%
GTTGTTGAACATTTATTGGG+TGG + chr3_2:201655-201674 Msa0389800:intron 35.0%
GAGAGCAATTTAACAAAACC+AGG - chr3_2:201702-201721 None:intergenic 35.0%
TCACTTCCTTTGCGATAAAA+GGG - chr3_2:201909-201928 None:intergenic 35.0%
TTCACTTCCTTTGCGATAAA+AGG - chr3_2:201910-201929 None:intergenic 35.0%
TTTATCGCAAAGGAAGTGAA+TGG + chr3_2:201910-201929 Msa0389800:intron 35.0%
AGGAAGTGAATGGCAAATAT+TGG + chr3_2:201920-201939 Msa0389800:intron 35.0%
TGCATCACTAAATTCTCGTT+TGG + chr3_2:202009-202028 Msa0389800:intron 35.0%
CTAAATTCTCGTTTGGAAGA+TGG + chr3_2:202016-202035 Msa0389800:intron 35.0%
GATTGAGTTAGAGAAGAACA+TGG + chr3_2:202071-202090 Msa0389800:intron 35.0%
! GAGAAGAACATGGGTTAATT+AGG + chr3_2:202081-202100 Msa0389800:intron 35.0%
AGCTATAAGAAAATGGTCTG+TGG + chr3_2:202148-202167 Msa0389800:intron 35.0%
ATAAGAAAATGGTCTGTGGT+TGG + chr3_2:202152-202171 Msa0389800:intron 35.0%
TAAGAAAATGGTCTGTGGTT+GGG + chr3_2:202153-202172 Msa0389800:intron 35.0%
TCACTCTAATCATGAATTGG+TGG - chr3_2:202200-202219 None:intergenic 35.0%
TGAGAAATAAGAGCAGGATT+AGG - chr3_2:202412-202431 None:intergenic 35.0%
CAAGATTGAGAAATAAGAGC+AGG - chr3_2:202418-202437 None:intergenic 35.0%
AACACATAATAGCTTCCTTG+CGG - chr3_2:202495-202514 None:intergenic 35.0%
TTCTTCACGCATAGTTCAAA+CGG - chr3_2:202530-202549 None:intergenic 35.0%
!! CATAATTTGCTGACCTTCAA+AGG - chr3_2:200628-200647 None:intergenic 35.0%
! CTTTGAAGGTCAGCAAATTA+TGG + chr3_2:200626-200645 Msa0389800:CDS 35.0%
ATTGACCTGACTGAATTTGA+GGG - chr3_2:200802-200821 None:intergenic 35.0%
AATTGACCTGACTGAATTTG+AGG - chr3_2:200803-200822 None:intergenic 35.0%
! GTTGCAACTTTATCTGGTTT+AGG + chr3_2:201001-201020 Msa0389800:intron 35.0%
!! GTTAATAGTTTTGCTGTCGT+AGG + chr3_2:201067-201086 Msa0389800:intron 35.0%
CTGTCGTAGGATTTCAATAT+TGG + chr3_2:201080-201099 Msa0389800:intron 35.0%
TCATTGTTCATTTGCATGCT+TGG + chr3_2:201234-201253 Msa0389800:intron 35.0%
TTAGGAGCTAAGTGTGTATT+TGG - chr3_2:201311-201330 None:intergenic 35.0%
GATACAAAGAGGAATCTACA+TGG - chr3_2:201596-201615 None:intergenic 35.0%
GTTGTTGAACATTTATTGGG+TGG + chr3_2:201655-201674 Msa0389800:intron 35.0%
GAGAGCAATTTAACAAAACC+AGG - chr3_2:201702-201721 None:intergenic 35.0%
TCACTTCCTTTGCGATAAAA+GGG - chr3_2:201909-201928 None:intergenic 35.0%
TTCACTTCCTTTGCGATAAA+AGG - chr3_2:201910-201929 None:intergenic 35.0%
TTTATCGCAAAGGAAGTGAA+TGG + chr3_2:201910-201929 Msa0389800:intron 35.0%
AGGAAGTGAATGGCAAATAT+TGG + chr3_2:201920-201939 Msa0389800:intron 35.0%
TGCATCACTAAATTCTCGTT+TGG + chr3_2:202009-202028 Msa0389800:intron 35.0%
CTAAATTCTCGTTTGGAAGA+TGG + chr3_2:202016-202035 Msa0389800:intron 35.0%
GATTGAGTTAGAGAAGAACA+TGG + chr3_2:202071-202090 Msa0389800:intron 35.0%
! GAGAAGAACATGGGTTAATT+AGG + chr3_2:202081-202100 Msa0389800:intron 35.0%
AGCTATAAGAAAATGGTCTG+TGG + chr3_2:202148-202167 Msa0389800:intron 35.0%
ATAAGAAAATGGTCTGTGGT+TGG + chr3_2:202152-202171 Msa0389800:intron 35.0%
TAAGAAAATGGTCTGTGGTT+GGG + chr3_2:202153-202172 Msa0389800:intron 35.0%
TCACTCTAATCATGAATTGG+TGG - chr3_2:202200-202219 None:intergenic 35.0%
TGAGAAATAAGAGCAGGATT+AGG - chr3_2:202412-202431 None:intergenic 35.0%
CAAGATTGAGAAATAAGAGC+AGG - chr3_2:202418-202437 None:intergenic 35.0%
AACACATAATAGCTTCCTTG+CGG - chr3_2:202495-202514 None:intergenic 35.0%
TTCTTCACGCATAGTTCAAA+CGG - chr3_2:202530-202549 None:intergenic 35.0%
GCGCTTATTTATAAGAAGCC+AGG + chr3_2:200423-200442 Msa0389800:five_prime_UTR 40.0%
ATTTATAAGAAGCCAGGCCA+AGG + chr3_2:200429-200448 Msa0389800:five_prime_UTR 40.0%
CAGAGAAAGAGATCGTGTTA+CGG + chr3_2:200483-200502 Msa0389800:five_prime_UTR 40.0%
AATGCCTTTGACAATGCGTT+TGG - chr3_2:200528-200547 None:intergenic 40.0%
TCTAGCGTTGCAACTTTATC+TGG + chr3_2:200995-201014 Msa0389800:intron 40.0%
CATTTGCATGCTTGGATTTG+CGG + chr3_2:201242-201261 Msa0389800:intron 40.0%
TGAACATTTATTGGGTGGAG+TGG + chr3_2:201660-201679 Msa0389800:intron 40.0%
GAACATTTATTGGGTGGAGT+GGG + chr3_2:201661-201680 Msa0389800:intron 40.0%
AACATTTATTGGGTGGAGTG+GGG + chr3_2:201662-201681 Msa0389800:intron 40.0%
TTCCTTTGCGATAAAAGGGA+TGG - chr3_2:201905-201924 None:intergenic 40.0%
GAGACTTCAATGTCTAGAGA+TGG - chr3_2:202050-202069 None:intergenic 40.0%
GGGGGTTGAAAACTTTATAC+TGG + chr3_2:202711-202730 Msa0389800:three_prime_UTR 40.0%
GCGCTTATTTATAAGAAGCC+AGG + chr3_2:200423-200442 Msa0389800:five_prime_UTR 40.0%
ATTTATAAGAAGCCAGGCCA+AGG + chr3_2:200429-200448 Msa0389800:five_prime_UTR 40.0%
CAGAGAAAGAGATCGTGTTA+CGG + chr3_2:200483-200502 Msa0389800:five_prime_UTR 40.0%
AATGCCTTTGACAATGCGTT+TGG - chr3_2:200528-200547 None:intergenic 40.0%
TCTAGCGTTGCAACTTTATC+TGG + chr3_2:200995-201014 Msa0389800:intron 40.0%
CATTTGCATGCTTGGATTTG+CGG + chr3_2:201242-201261 Msa0389800:intron 40.0%
TGAACATTTATTGGGTGGAG+TGG + chr3_2:201660-201679 Msa0389800:intron 40.0%
GAACATTTATTGGGTGGAGT+GGG + chr3_2:201661-201680 Msa0389800:intron 40.0%
AACATTTATTGGGTGGAGTG+GGG + chr3_2:201662-201681 Msa0389800:intron 40.0%
TTCCTTTGCGATAAAAGGGA+TGG - chr3_2:201905-201924 None:intergenic 40.0%
GAGACTTCAATGTCTAGAGA+TGG - chr3_2:202050-202069 None:intergenic 40.0%
GGGGGTTGAAAACTTTATAC+TGG + chr3_2:202711-202730 Msa0389800:three_prime_UTR 40.0%
AGTCTCTCTATCTCACTCCT+TGG - chr3_2:200449-200468 None:intergenic 45.0%
AGAAAGAGATCGTGTTACGG+CGG + chr3_2:200486-200505 Msa0389800:five_prime_UTR 45.0%
GGATCCAAACGCATTGTCAA+AGG + chr3_2:200521-200540 Msa0389800:CDS 45.0%
AGAACCATCTTGGTAGAGAG+TGG - chr3_2:200598-200617 None:intergenic 45.0%
AGGTGAGCATAGAACCATCT+TGG - chr3_2:200608-200627 None:intergenic 45.0%
GGTTCTATGCTCACCTTTGA+AGG + chr3_2:200612-200631 Msa0389800:CDS 45.0%
AATTCCCTCTCTCTCTCTCT+AGG + chr3_2:200819-200838 Msa0389800:intron 45.0%
ATTCCCTCTCTCTCTCTCTA+GGG + chr3_2:200820-200839 Msa0389800:intron 45.0%
AAACCCTAGAGAGAGAGAGA+GGG - chr3_2:200826-200845 None:intergenic 45.0%
AAAACCCTAGAGAGAGAGAG+AGG - chr3_2:200827-200846 None:intergenic 45.0%
ACATTTATTGGGTGGAGTGG+GGG + chr3_2:201663-201682 Msa0389800:intron 45.0%
GCTAGTTAATATGCGCCTTG+TGG + chr3_2:201789-201808 Msa0389800:intron 45.0%
AATATGCGCCTTGTGGTCAA+TGG + chr3_2:201796-201815 Msa0389800:intron 45.0%
TCCAAGAACCATTGACCACA+AGG - chr3_2:201807-201826 None:intergenic 45.0%
! GACCATCCCTTTTATCGCAA+AGG + chr3_2:201900-201919 Msa0389800:intron 45.0%
CTCAACAGACCCTTCAAGAT+GGG - chr3_2:201962-201981 None:intergenic 45.0%
CATCTTGAAGGGTCTGTTGA+GGG + chr3_2:201961-201980 Msa0389800:intron 45.0%
ATCTTGAAGGGTCTGTTGAG+GGG + chr3_2:201962-201981 Msa0389800:intron 45.0%
TGGTTGGGCAATGGGAATTA+GGG + chr3_2:202168-202187 Msa0389800:intron 45.0%
!! CTTGCGGTGTTGGTATCAAA+TGG - chr3_2:202479-202498 None:intergenic 45.0%
CATTTGATACCAACACCGCA+AGG + chr3_2:202477-202496 Msa0389800:CDS 45.0%
TAATAGCTTCCTTGCGGTGT+TGG - chr3_2:202489-202508 None:intergenic 45.0%
AGTCTCTCTATCTCACTCCT+TGG - chr3_2:200449-200468 None:intergenic 45.0%
AGAAAGAGATCGTGTTACGG+CGG + chr3_2:200486-200505 Msa0389800:five_prime_UTR 45.0%
GGATCCAAACGCATTGTCAA+AGG + chr3_2:200521-200540 Msa0389800:CDS 45.0%
AGAACCATCTTGGTAGAGAG+TGG - chr3_2:200598-200617 None:intergenic 45.0%
AGGTGAGCATAGAACCATCT+TGG - chr3_2:200608-200627 None:intergenic 45.0%
GGTTCTATGCTCACCTTTGA+AGG + chr3_2:200612-200631 Msa0389800:CDS 45.0%
AATTCCCTCTCTCTCTCTCT+AGG + chr3_2:200819-200838 Msa0389800:intron 45.0%
ATTCCCTCTCTCTCTCTCTA+GGG + chr3_2:200820-200839 Msa0389800:intron 45.0%
AAACCCTAGAGAGAGAGAGA+GGG - chr3_2:200826-200845 None:intergenic 45.0%
AAAACCCTAGAGAGAGAGAG+AGG - chr3_2:200827-200846 None:intergenic 45.0%
ACATTTATTGGGTGGAGTGG+GGG + chr3_2:201663-201682 Msa0389800:intron 45.0%
GCTAGTTAATATGCGCCTTG+TGG + chr3_2:201789-201808 Msa0389800:intron 45.0%
AATATGCGCCTTGTGGTCAA+TGG + chr3_2:201796-201815 Msa0389800:intron 45.0%
TCCAAGAACCATTGACCACA+AGG - chr3_2:201807-201826 None:intergenic 45.0%
! GACCATCCCTTTTATCGCAA+AGG + chr3_2:201900-201919 Msa0389800:intron 45.0%
CTCAACAGACCCTTCAAGAT+GGG - chr3_2:201962-201981 None:intergenic 45.0%
CATCTTGAAGGGTCTGTTGA+GGG + chr3_2:201961-201980 Msa0389800:intron 45.0%
ATCTTGAAGGGTCTGTTGAG+GGG + chr3_2:201962-201981 Msa0389800:intron 45.0%
TGGTTGGGCAATGGGAATTA+GGG + chr3_2:202168-202187 Msa0389800:intron 45.0%
!! CTTGCGGTGTTGGTATCAAA+TGG - chr3_2:202479-202498 None:intergenic 45.0%
CATTTGATACCAACACCGCA+AGG + chr3_2:202477-202496 Msa0389800:CDS 45.0%
TAATAGCTTCCTTGCGGTGT+TGG - chr3_2:202489-202508 None:intergenic 45.0%
!! CGCATTGTCAAAGGCATTCG+TGG + chr3_2:200530-200549 Msa0389800:CDS 50.0%
TGGTAGAGAGTGGCGAGATT+GGG - chr3_2:200588-200607 None:intergenic 50.0%
TTGGTAGAGAGTGGCGAGAT+TGG - chr3_2:200589-200608 None:intergenic 50.0%
AGTGATGGCACTGCTGGAAA+GGG - chr3_2:200686-200705 None:intergenic 50.0%
TTGACAATCGACGGTGGTGA+TGG - chr3_2:200709-200728 None:intergenic 50.0%
AGAAGGTTGACAATCGACGG+TGG - chr3_2:200715-200734 None:intergenic 50.0%
! ACCGTCGATTGTCAACCTTC+TGG + chr3_2:200714-200733 Msa0389800:CDS 50.0%
GCCAGAAGGTTGACAATCGA+CGG - chr3_2:200718-200737 None:intergenic 50.0%
TGTCAACCTTCTGGCGCTAA+CGG + chr3_2:200723-200742 Msa0389800:CDS 50.0%
GGCATGCTTGTCTTTGTCAG+TGG + chr3_2:200747-200766 Msa0389800:CDS 50.0%
ACACGCCCTCAAATTCAGTC+AGG + chr3_2:200794-200813 Msa0389800:CDS 50.0%
GCTTGGATTTGCGGTGAGTT+TGG + chr3_2:201251-201270 Msa0389800:intron 50.0%
AGGCGCGTTCTTTCTAGACA+TGG - chr3_2:201739-201758 None:intergenic 50.0%
GCCTTGTGGTCAATGGTTCT+TGG + chr3_2:201803-201822 Msa0389800:intron 50.0%
CCTCAACAGACCCTTCAAGA+TGG - chr3_2:201963-201982 None:intergenic 50.0%
CCATCTTGAAGGGTCTGTTG+AGG + chr3_2:201960-201979 Msa0389800:intron 50.0%
TCTTGAAGGGTCTGTTGAGG+GGG + chr3_2:201963-201982 Msa0389800:intron 50.0%
AATGGTCTGTGGTTGGGCAA+TGG + chr3_2:202159-202178 Msa0389800:intron 50.0%
ATGGTCTGTGGTTGGGCAAT+GGG + chr3_2:202160-202179 Msa0389800:intron 50.0%
GTGGTTGGGCAATGGGAATT+AGG + chr3_2:202167-202186 Msa0389800:intron 50.0%
!! CGCATTGTCAAAGGCATTCG+TGG + chr3_2:200530-200549 Msa0389800:CDS 50.0%
TGGTAGAGAGTGGCGAGATT+GGG - chr3_2:200588-200607 None:intergenic 50.0%
TTGGTAGAGAGTGGCGAGAT+TGG - chr3_2:200589-200608 None:intergenic 50.0%
AGTGATGGCACTGCTGGAAA+GGG - chr3_2:200686-200705 None:intergenic 50.0%
TTGACAATCGACGGTGGTGA+TGG - chr3_2:200709-200728 None:intergenic 50.0%
AGAAGGTTGACAATCGACGG+TGG - chr3_2:200715-200734 None:intergenic 50.0%
! ACCGTCGATTGTCAACCTTC+TGG + chr3_2:200714-200733 Msa0389800:CDS 50.0%
GCCAGAAGGTTGACAATCGA+CGG - chr3_2:200718-200737 None:intergenic 50.0%
TGTCAACCTTCTGGCGCTAA+CGG + chr3_2:200723-200742 Msa0389800:CDS 50.0%
GGCATGCTTGTCTTTGTCAG+TGG + chr3_2:200747-200766 Msa0389800:CDS 50.0%
ACACGCCCTCAAATTCAGTC+AGG + chr3_2:200794-200813 Msa0389800:CDS 50.0%
GCTTGGATTTGCGGTGAGTT+TGG + chr3_2:201251-201270 Msa0389800:intron 50.0%
AGGCGCGTTCTTTCTAGACA+TGG - chr3_2:201739-201758 None:intergenic 50.0%
GCCTTGTGGTCAATGGTTCT+TGG + chr3_2:201803-201822 Msa0389800:intron 50.0%
CCTCAACAGACCCTTCAAGA+TGG - chr3_2:201963-201982 None:intergenic 50.0%
CCATCTTGAAGGGTCTGTTG+AGG + chr3_2:201960-201979 Msa0389800:intron 50.0%
TCTTGAAGGGTCTGTTGAGG+GGG + chr3_2:201963-201982 Msa0389800:intron 50.0%
AATGGTCTGTGGTTGGGCAA+TGG + chr3_2:202159-202178 Msa0389800:intron 50.0%
ATGGTCTGTGGTTGGGCAAT+GGG + chr3_2:202160-202179 Msa0389800:intron 50.0%
GTGGTTGGGCAATGGGAATT+AGG + chr3_2:202167-202186 Msa0389800:intron 50.0%
CTCTATCTCACTCCTTGGCC+TGG - chr3_2:200444-200463 None:intergenic 55.0%
!! ATTGGGACGGTTGGTGTCGA+AGG - chr3_2:200571-200590 None:intergenic 55.0%
AGAGAGTGGCGAGATTGGGA+CGG - chr3_2:200584-200603 None:intergenic 55.0%
CTCGCCACTCTCTACCAAGA+TGG + chr3_2:200591-200610 Msa0389800:CDS 55.0%
GAGTGATGGCACTGCTGGAA+AGG - chr3_2:200687-200706 None:intergenic 55.0%
TGATGGAGTGATGGCACTGC+TGG - chr3_2:200692-200711 None:intergenic 55.0%
AGTGGTAATCTCCAGCTCGC+CGG + chr3_2:200765-200784 Msa0389800:CDS 55.0%
! TTTGAGGGCGTGTTGTTCGC+CGG - chr3_2:200787-200806 None:intergenic 55.0%
!! TGGAGTGGGGGAAGTGTTTG+TGG + chr3_2:201675-201694 Msa0389800:intron 55.0%
! TGTCAGGGCACCCATCTTGA+AGG + chr3_2:201949-201968 Msa0389800:intron 55.0%
! GTCAGGGCACCCATCTTGAA+GGG + chr3_2:201950-201969 Msa0389800:intron 55.0%
CTTGAAGGGTCTGTTGAGGG+GGG + chr3_2:201964-201983 Msa0389800:intron 55.0%
TTGAAGGGTCTGTTGAGGGG+GGG + chr3_2:201965-201984 Msa0389800:intron 55.0%
CTCTATCTCACTCCTTGGCC+TGG - chr3_2:200444-200463 None:intergenic 55.0%
!! ATTGGGACGGTTGGTGTCGA+AGG - chr3_2:200571-200590 None:intergenic 55.0%
AGAGAGTGGCGAGATTGGGA+CGG - chr3_2:200584-200603 None:intergenic 55.0%
CTCGCCACTCTCTACCAAGA+TGG + chr3_2:200591-200610 Msa0389800:CDS 55.0%
GAGTGATGGCACTGCTGGAA+AGG - chr3_2:200687-200706 None:intergenic 55.0%
TGATGGAGTGATGGCACTGC+TGG - chr3_2:200692-200711 None:intergenic 55.0%
AGTGGTAATCTCCAGCTCGC+CGG + chr3_2:200765-200784 Msa0389800:CDS 55.0%
! TTTGAGGGCGTGTTGTTCGC+CGG - chr3_2:200787-200806 None:intergenic 55.0%
!! TGGAGTGGGGGAAGTGTTTG+TGG + chr3_2:201675-201694 Msa0389800:intron 55.0%
! TGTCAGGGCACCCATCTTGA+AGG + chr3_2:201949-201968 Msa0389800:intron 55.0%
! GTCAGGGCACCCATCTTGAA+GGG + chr3_2:201950-201969 Msa0389800:intron 55.0%
CTTGAAGGGTCTGTTGAGGG+GGG + chr3_2:201964-201983 Msa0389800:intron 55.0%
TTGAAGGGTCTGTTGAGGGG+GGG + chr3_2:201965-201984 Msa0389800:intron 55.0%
TTACGGCGGCGTAAGAGCGA+TGG + chr3_2:200500-200519 Msa0389800:exon 60.0%
AGTGGCGAGATTGGGACGGT+TGG - chr3_2:200580-200599 None:intergenic 60.0%
!! CGACGGTGGTGATGGAGTGA+TGG - chr3_2:200701-200720 None:intergenic 60.0%
CAACCTTCTGGCGCTAACGG+CGG + chr3_2:200726-200745 Msa0389800:CDS 60.0%
!! GGGGGAAGTGTTTGTGGTCC+TGG + chr3_2:201681-201700 Msa0389800:intron 60.0%
TGAAGGGTCTGTTGAGGGGG+GGG + chr3_2:201966-201985 Msa0389800:intron 60.0%
TTACGGCGGCGTAAGAGCGA+TGG + chr3_2:200500-200519 Msa0389800:exon 60.0%
AGTGGCGAGATTGGGACGGT+TGG - chr3_2:200580-200599 None:intergenic 60.0%
!! CGACGGTGGTGATGGAGTGA+TGG - chr3_2:200701-200720 None:intergenic 60.0%
CAACCTTCTGGCGCTAACGG+CGG + chr3_2:200726-200745 Msa0389800:CDS 60.0%
!! GGGGGAAGTGTTTGTGGTCC+TGG + chr3_2:201681-201700 Msa0389800:intron 60.0%
TGAAGGGTCTGTTGAGGGGG+GGG + chr3_2:201966-201985 Msa0389800:intron 60.0%
!! GGGACGGTTGGTGTCGAAGG+TGG - chr3_2:200568-200587 None:intergenic 65.0%
ATGCCGCCGTTAGCGCCAGA+AGG - chr3_2:200732-200751 None:intergenic 65.0%
GAAGGGTCTGTTGAGGGGGG+GGG + chr3_2:201967-201986 Msa0389800:intron 65.0%
AAGGGTCTGTTGAGGGGGGG+GGG + chr3_2:201968-201987 Msa0389800:intron 65.0%
!! GGGACGGTTGGTGTCGAAGG+TGG - chr3_2:200568-200587 None:intergenic 65.0%
ATGCCGCCGTTAGCGCCAGA+AGG - chr3_2:200732-200751 None:intergenic 65.0%
GAAGGGTCTGTTGAGGGGGG+GGG + chr3_2:201967-201986 Msa0389800:intron 65.0%
AAGGGTCTGTTGAGGGGGGG+GGG + chr3_2:201968-201987 Msa0389800:intron 65.0%
! CGTGTTGTTCGCCGGCGAGC+TGG - chr3_2:200779-200798 None:intergenic 70.0%
AGGGTCTGTTGAGGGGGGGG+GGG + chr3_2:201969-201988 Msa0389800:intron 70.0%
! CGTGTTGTTCGCCGGCGAGC+TGG - chr3_2:200779-200798 None:intergenic 70.0%
AGGGTCTGTTGAGGGGGGGG+GGG + chr3_2:201969-201988 Msa0389800:intron 70.0%
GGGTCTGTTGAGGGGGGGGG+GGG + chr3_2:201970-201989 Msa0389800:intron 75.0%
GGTCTGTTGAGGGGGGGGGG+GGG + chr3_2:201971-201990 Msa0389800:intron 75.0%
GTCTGTTGAGGGGGGGGGGG+GGG + chr3_2:201972-201991 Msa0389800:intron 75.0%
TCTGTTGAGGGGGGGGGGGG+GGG + chr3_2:201973-201992 Msa0389800:intron 75.0%
GGGTCTGTTGAGGGGGGGGG+GGG + chr3_2:201970-201989 Msa0389800:intron 75.0%
GGTCTGTTGAGGGGGGGGGG+GGG + chr3_2:201971-201990 Msa0389800:intron 75.0%
GTCTGTTGAGGGGGGGGGGG+GGG + chr3_2:201972-201991 Msa0389800:intron 75.0%
TCTGTTGAGGGGGGGGGGGG+GGG + chr3_2:201973-201992 Msa0389800:intron 75.0%
! CTGTTGAGGGGGGGGGGGGG+GGG + chr3_2:201974-201993 Msa0389800:intron 80.0%
! TGTTGAGGGGGGGGGGGGGG+GGG + chr3_2:201975-201994 Msa0389800:intron 80.0%
! CTGTTGAGGGGGGGGGGGGG+GGG + chr3_2:201974-201993 Msa0389800:intron 80.0%
! TGTTGAGGGGGGGGGGGGGG+GGG + chr3_2:201975-201994 Msa0389800:intron 80.0%
! GTTGAGGGGGGGGGGGGGGG+GGG + chr3_2:201976-201995 Msa0389800:intron 85.0%
! TTGAGGGGGGGGGGGGGGGG+GGG + chr3_2:201977-201996 Msa0389800:intron 85.0%
! GTTGAGGGGGGGGGGGGGGG+GGG + chr3_2:201976-201995 Msa0389800:intron 85.0%
! TTGAGGGGGGGGGGGGGGGG+GGG + chr3_2:201977-201996 Msa0389800:intron 85.0%
! TGAGGGGGGGGGGGGGGGGG+GGG + chr3_2:201978-201997 Msa0389800:intron 90.0%
! TGAGGGGGGGGGGGGGGGGG+GGG + chr3_2:201978-201997 Msa0389800:intron 90.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr3_2:201979-201998 Msa0389800:intron 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:201980-201999 Msa0389800:intron 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr3_2:201979-201998 Msa0389800:intron 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr3_2:201980-201999 Msa0389800:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 200403 202815 200403 ID=Msa0389800;Name=Msa0389800
chr3_2 mRNA 200403 202815 200403 ID=Msa0389800-mRNA-1;Parent=Msa0389800;Name=Msa0389800-mRNA-1;_AED=0.00;_eAED=0.00;_QI=116|1|1|1|1|1|2|270|123
chr3_2 exon 200403 200815 200403 ID=Msa0389800-mRNA-1:exon:21;Parent=Msa0389800-mRNA-1
chr3_2 exon 202471 202815 202471 ID=Msa0389800-mRNA-1:exon:22;Parent=Msa0389800-mRNA-1
chr3_2 five_prime_UTR 200403 200518 200403 ID=Msa0389800-mRNA-1:five_prime_utr;Parent=Msa0389800-mRNA-1
chr3_2 CDS 200519 200815 200519 ID=Msa0389800-mRNA-1:cds;Parent=Msa0389800-mRNA-1
chr3_2 CDS 202471 202545 202471 ID=Msa0389800-mRNA-1:cds;Parent=Msa0389800-mRNA-1
chr3_2 three_prime_UTR 202546 202815 202546 ID=Msa0389800-mRNA-1:three_prime_utr;Parent=Msa0389800-mRNA-1
Gene Sequence

>Msa0389800

ATGGATCCAAACGCATTGTCAAAGGCATTCGTGGAACACTACTACACCACCTTCGACACCAACCGTCCCAATCTCGCCACTCTCTACCAAGATGGTTCTATGCTCACCTTTGAAGGTCAGCAAATTATGGGATCTCAGAATATCGTCGCTAAACTCACTTCTCTCCCTTTCCAGCAGTGCCATCACTCCATCACCACCGTCGATTGTCAACCTTCTGGCGCTAACGGCGGCATGCTTGTCTTTGTCAGTGGTAATCTCCAGCTCGCCGGCGAACAACACGCCCTCAAATTCAGTCAGATGTTCCATTTGATACCAACACCGCAAGGAAGCTATTATGTGTTGAATGACATATTCCGTTTGAACTATGCGTGA
Protein sequence

>Msa0389800

MDPNALSKAFVEHYYTTFDTNRPNLATLYQDGSMLTFEGQQIMGSQNIVAKLTSLPFQQCHHSITTVDCQPSGANGGMLVFVSGNLQLAGEQHALKFSQMFHLIPTPQGSYYVLNDIFRLNYA*