AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0267580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267580 MtrunA17_Chr4g0044331 93.548 155 10 0 1 155 1 155 3.16e-97 277
Msa0267580 MtrunA17_Chr7g0271891 62.069 116 42 1 13 128 17 130 8.96e-48 152
Msa0267580 MtrunA17_Chr8g0344721 45.968 124 63 3 5 125 3 125 1.30e-33 118
Msa0267580 MtrunA17_Chr3g0138471 44.828 87 41 2 13 95 5 88 2.18e-17 77.4
Msa0267580 MtrunA17_Chr2g0282741 48.571 70 33 1 9 78 1 67 8.15e-17 75.9
Msa0267580 MtrunA17_Chr2g0282761 53.030 66 28 1 13 78 5 67 1.04e-16 75.5
Msa0267580 MtrunA17_Chr5g0415731 40.404 99 54 2 10 103 3 101 1.25e-16 72.0
Msa0267580 MtrunA17_Chr4g0040501 50.000 66 30 1 13 78 5 67 1.48e-16 75.1
Msa0267580 MtrunA17_Chr1g0159491 52.941 68 28 1 13 80 7 70 2.70e-16 69.3
Msa0267580 MtrunA17_Chr4g0006391 48.485 66 31 1 13 78 5 67 5.20e-16 73.6
Msa0267580 MtrunA17_Chr4g0061421 49.254 67 34 0 13 79 9 75 2.48e-15 72.0
Msa0267580 MtrunA17_Chr7g0263971 52.941 68 29 1 13 80 370 434 3.92e-15 71.6
Msa0267580 MtrunA17_Chr2g0324921 47.143 70 34 1 9 78 1 67 4.17e-15 70.9
Msa0267580 MtrunA17_Chr5g0426951 50.746 67 29 1 12 78 83 145 8.00e-15 70.5
Msa0267580 MtrunA17_Chr7g0269841 53.731 67 27 2 12 78 26 88 1.30e-14 69.7
Msa0267580 MtrunA17_Chr1g0209551 44.286 70 35 1 14 83 18 83 1.05e-13 67.4
Msa0267580 MtrunA17_Chr1g0159511 52.941 68 28 1 11 78 5 68 1.14e-13 67.0
Msa0267580 MtrunA17_Chr4g0021141 45.455 66 32 1 13 78 23 84 1.57e-13 63.5
Msa0267580 MtrunA17_Chr8g0334811 43.038 79 33 2 4 78 2 72 1.75e-13 66.6
Msa0267580 MtrunA17_Chr5g0399201 47.692 65 33 1 14 78 14 77 4.23e-13 65.9
Msa0267580 MtrunA17_Chr3g0123861 49.315 73 28 3 13 81 83 150 6.48e-13 65.1
Msa0267580 MtrunA17_Chr6g0478651 36.607 112 58 4 13 116 69 175 6.69e-13 65.1
Msa0267580 MtrunA17_Chr5g0427221 48.529 68 31 1 13 80 49 112 9.44e-13 62.0
Msa0267580 MtrunA17_Chr4g0010781 45.333 75 37 1 4 78 78 148 1.01e-12 64.7
Msa0267580 MtrunA17_Chr2g0333221 50.725 69 29 2 10 78 68 131 1.20e-12 64.3
Msa0267580 MtrunA17_Chr3g0087741 41.333 75 40 1 4 78 81 151 2.07e-12 63.5
Msa0267580 MtrunA17_Chr8g0378161 43.284 67 36 1 12 78 60 124 3.07e-12 61.6
Msa0267580 MtrunA17_Chr6g0460461 38.806 67 40 1 13 78 3 69 3.68e-12 61.6
Msa0267580 MtrunA17_Chr1g0173931 44.118 68 34 2 11 78 37 100 2.24e-11 60.1
Msa0267580 MtrunA17_Chr5g0393371 47.826 69 32 1 11 79 5 69 2.49e-11 60.5
Msa0267580 MtrunA17_Chr5g0414471 37.975 79 45 1 14 92 27 101 3.26e-11 60.1
Msa0267580 MtrunA17_Chr7g0258061 44.776 67 33 2 12 78 22 84 4.79e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267580 AT1G71000.1 59.231 130 51 1 6 135 2 129 2.04e-47 151
Msa0267580 AT1G71000.2 55.932 118 50 1 6 123 2 117 1.35e-41 137
Msa0267580 AT1G56300.1 57.500 120 49 1 9 128 10 127 2.18e-41 136
Msa0267580 AT1G56300.2 61.616 99 38 0 9 107 10 108 2.20e-38 127
Msa0267580 AT3G14200.1 43.089 123 66 3 9 128 9 130 8.90e-31 111
Msa0267580 AT1G72416.3 43.617 94 51 2 14 107 7 98 3.43e-22 88.2
Msa0267580 AT1G72416.2 43.617 94 51 2 14 107 7 98 4.94e-22 87.4
Msa0267580 AT1G72416.1 43.617 94 51 2 14 107 7 98 4.98e-22 87.4
Msa0267580 AT1G72416.4 43.617 94 51 2 14 107 7 98 4.99e-22 87.4
Msa0267580 AT5G25530.2 51.515 66 29 1 13 78 5 67 1.40e-17 78.2
Msa0267580 AT4G28480.2 47.143 70 34 1 9 78 1 67 3.47e-16 73.9
Msa0267580 AT3G08910.1 50.000 66 30 1 13 78 5 67 3.95e-16 73.9
Msa0267580 AT5G01390.3 50.000 66 30 1 13 78 5 67 4.41e-16 72.8
Msa0267580 AT1G59725.1 48.485 66 32 1 13 78 5 68 4.90e-16 73.9
Msa0267580 AT5G01390.4 50.000 66 30 1 13 78 5 67 5.90e-16 72.4
Msa0267580 AT4G28480.1 47.143 70 34 1 9 78 1 67 6.44e-16 73.6
Msa0267580 AT5G01390.2 50.000 66 30 1 13 78 5 67 7.15e-16 72.8
Msa0267580 AT1G10350.1 45.455 66 33 1 13 78 5 67 9.53e-16 73.2
Msa0267580 AT5G01390.1 50.000 66 30 1 13 78 5 67 1.25e-15 72.8
Msa0267580 AT1G74250.1 50.000 68 33 1 13 79 12 79 3.98e-15 72.0
Msa0267580 AT3G47940.1 47.143 70 35 1 9 78 1 68 4.32e-15 71.2
Msa0267580 AT5G25530.1 45.946 74 29 2 13 78 5 75 5.68e-15 71.2
Msa0267580 AT2G20560.1 48.485 66 31 1 13 78 5 67 7.72e-15 70.5
Msa0267580 AT5G16650.1 46.429 84 39 3 1 83 1 79 2.49e-14 65.9
Msa0267580 AT5G16650.2 46.429 84 39 3 1 83 1 79 4.69e-14 66.2
Msa0267580 AT5G03160.1 45.588 68 34 1 13 80 371 435 7.59e-14 68.2
Msa0267580 AT2G22360.1 43.617 94 44 3 13 102 87 175 8.93e-14 67.8
Msa0267580 AT4G13830.1 42.857 70 38 1 12 81 66 133 2.77e-13 63.9
Msa0267580 AT5G06910.1 33.129 163 83 7 7 147 23 181 5.38e-13 65.1
Msa0267580 AT4G13830.3 42.857 70 38 1 12 81 66 133 7.32e-13 63.5
Msa0267580 AT4G13830.2 42.857 70 38 1 12 81 66 133 1.01e-12 63.2
Msa0267580 AT3G62600.1 46.377 69 33 1 10 78 24 88 1.05e-12 64.7
Msa0267580 AT2G33735.1 45.455 66 32 1 13 78 23 84 1.23e-12 61.2
Msa0267580 AT2G33735.2 45.455 66 32 1 13 78 23 84 1.23e-12 61.2
Msa0267580 AT4G39150.3 50.000 68 30 1 11 78 5 68 1.61e-12 64.3
Msa0267580 AT4G39150.1 50.000 68 30 1 11 78 5 68 1.61e-12 64.3
Msa0267580 AT4G39150.2 50.000 68 30 1 11 78 5 68 1.61e-12 64.3
Msa0267580 AT2G41000.1 37.681 69 42 1 13 80 4 72 3.84e-12 61.6
Msa0267580 AT4G09350.1 47.887 71 32 2 12 81 106 172 4.59e-12 62.4
Msa0267580 AT1G80030.4 47.826 69 31 2 10 78 73 136 5.27e-12 62.8
Msa0267580 AT1G80030.2 47.826 69 31 2 10 78 73 136 6.37e-12 62.8
Msa0267580 AT1G80030.3 47.826 69 31 2 10 78 73 136 6.37e-12 62.8
Msa0267580 AT1G80030.1 47.826 69 31 2 10 78 73 136 6.37e-12 62.8
Msa0267580 AT2G41000.2 37.681 69 42 1 13 80 4 72 6.54e-12 61.2
Msa0267580 AT2G35720.1 43.056 72 40 1 7 78 10 80 6.72e-12 62.8
Msa0267580 AT1G28210.3 38.554 83 47 1 12 94 48 126 6.92e-12 62.4
Msa0267580 AT1G28210.1 38.554 83 47 1 12 94 48 126 7.05e-12 62.4
Msa0267580 AT1G68370.1 44.615 65 32 1 14 78 19 79 8.32e-12 62.4
Msa0267580 AT1G28210.2 38.554 83 47 1 12 94 48 126 8.95e-12 62.0
Msa0267580 AT1G24120.1 36.709 79 46 1 14 92 22 96 1.22e-11 62.0
Msa0267580 AT3G12170.1 32.026 153 77 6 12 146 11 154 1.39e-11 60.8
Msa0267580 AT3G12170.2 31.081 148 85 5 12 146 47 190 2.84e-11 60.5
Msa0267580 AT4G39960.1 45.455 66 31 1 13 78 86 146 3.11e-11 60.5
Msa0267580 AT4G39960.2 45.455 66 31 1 13 78 86 146 3.11e-11 60.5
Msa0267580 AT5G48030.1 45.455 66 32 1 13 78 95 156 3.16e-11 60.5
Msa0267580 AT4G10130.2 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0267580 AT4G10130.4 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0267580 AT4G10130.1 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0267580 AT4G10130.3 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0267580 AT4G10130.5 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0267580 AT1G59980.2 37.975 79 45 1 14 92 25 99 4.70e-11 60.1
Msa0267580 AT1G59980.1 37.975 79 45 1 14 92 25 99 6.19e-11 59.7
Msa0267580 AT2G21510.3 45.588 68 33 1 11 78 5 68 6.91e-11 59.7
Msa0267580 AT2G21510.1 45.588 68 33 1 11 78 5 68 6.91e-11 59.7
Msa0267580 AT2G21510.5 45.588 68 33 1 11 78 5 68 7.27e-11 59.3
Msa0267580 AT2G21510.2 45.588 68 33 1 11 78 5 68 7.58e-11 59.3
Msa0267580 AT2G21510.4 45.588 68 33 1 11 78 5 68 7.58e-11 59.3

Find 48 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCTAAAGTCGGTTAATT+AGG 0.232680 2_2:+69203977 None:intergenic
TTATTGCAGGAGAAGGTTTA+TGG 0.240463 2_2:-69201758 Msa0267580:intron
CAAGGGAAATAATAAATTTA+TGG 0.275299 2_2:+69203933 None:intergenic
GGAGAAGGTTTATGGTTTAG+AGG 0.283100 2_2:-69201750 Msa0267580:CDS
ACCAAACTCAACAACTAAAA+AGG 0.283729 2_2:+69203802 None:intergenic
TCATCTTACTACAGTATTCT+TGG 0.298603 2_2:-69203710 Msa0267580:CDS
TAATAAATTTATGGAAGTTA+TGG 0.313874 2_2:+69203942 None:intergenic
ATGAGATAAGGCGTGCTTAT+AGG 0.318628 2_2:-69203664 Msa0267580:CDS
AACATACAAGAAGCTTATTC+AGG 0.364089 2_2:-69203461 Msa0267580:intron
GGTGTTCTTGTCCACCTATC+TGG 0.379195 2_2:+69203518 None:intergenic
TTATGGTTTAGAGGAGTTGC+AGG 0.401445 2_2:-69201741 Msa0267580:CDS
CTCGCCTAACTTCAGCCATA+AGG 0.416208 2_2:+69203130 None:intergenic
CTGTAGTAAGATGACGATAA+TGG 0.435521 2_2:+69203719 None:intergenic
GGACGAAATGGTGTCCCTTA+TGG 0.441713 2_2:-69203145 Msa0267580:CDS
GGAGTTGCAGGACATGTTCA+TGG 0.460111 2_2:-69201729 Msa0267580:CDS
AGAGTCCTTCAATGTATTGT+GGG 0.465130 2_2:-69201688 Msa0267580:CDS
GTATTGTGGGACACCGTCTA+TGG 0.469755 2_2:-69201675 Msa0267580:CDS
ATTCTTCATTAGATGAGATA+AGG 0.473305 2_2:-69203676 Msa0267580:CDS
TCGCCTAACTTCAGCCATAA+GGG 0.480132 2_2:+69203131 None:intergenic
ACCTCATCTTCTTCCTCTTG+AGG 0.492857 2_2:+69203291 None:intergenic
TGCTTATAGGAAGCTTGCTA+TGG 0.497498 2_2:-69203651 Msa0267580:intron
GAGAGTCCTTCAATGTATTG+TGG 0.499022 2_2:-69201689 Msa0267580:CDS
TGTCCCTTATGGCTGAAGTT+AGG 0.499106 2_2:-69203134 Msa0267580:CDS
CTAAAGTCGGTTAATTAGGA+AGG 0.501953 2_2:+69203981 None:intergenic
AAAAGAACTATGTACGATGC+TGG 0.511823 2_2:-69203324 Msa0267580:CDS
TATGTTCTGAAATTTACGCT+TGG 0.515893 2_2:+69203478 None:intergenic
TGCAGCAATGGCATCCAGAT+AGG 0.538770 2_2:-69203532 Msa0267580:intron
ACAATGGATGATTATAGTGA+AGG 0.543818 2_2:-69203743 Msa0267580:CDS
AACACTTCCTCTCTTAGCAA+AGG 0.546362 2_2:+69201643 None:intergenic
ATTGACAAGGGAACGGAACA+AGG 0.549647 2_2:+69203915 None:intergenic
CAATGGATGATTATAGTGAA+GGG 0.570763 2_2:-69203742 Msa0267580:CDS
ATATTTATTGAAGCTAAAGT+CGG 0.576457 2_2:+69203968 None:intergenic
TTGGCTTCACTCAATAAAGA+AGG 0.580558 2_2:+69203497 None:intergenic
GCAGGACATGTTCATGGAGA+TGG 0.589641 2_2:-69201723 Msa0267580:CDS
ATGTTCATGGAGATGGCTGA+AGG 0.590061 2_2:-69201716 Msa0267580:CDS
GGTGTCCCACAATACATTGA+AGG 0.591958 2_2:+69201683 None:intergenic
TCCTCAAGAGGAAGAAGATG+AGG 0.607948 2_2:-69203292 Msa0267580:intron
GATGAATCCTTTGCTAAGAG+AGG 0.608489 2_2:-69201650 Msa0267580:CDS
TAAAGTCGGTTAATTAGGAA+GGG 0.610354 2_2:+69203982 None:intergenic
AAGGATTCATCAACCATAGA+CGG 0.618990 2_2:+69201662 None:intergenic
ATGGTTTAAACGAGTTACAA+TGG 0.625435 2_2:-69203759 Msa0267580:exon
GATTGCATGCATAATTGACA+AGG 0.653903 2_2:+69203902 None:intergenic
TGGCTTGTATGATCCTCAAG+AGG 0.660837 2_2:-69203304 Msa0267580:CDS
TTGACAAGGGAACGGAACAA+GGG 0.665612 2_2:+69203916 None:intergenic
ATGCATAATTGACAAGGGAA+CGG 0.667700 2_2:+69203908 None:intergenic
TATGGCTGAAGTTAGGCGAG+AGG 0.677695 2_2:-69203127 Msa0267580:intron
AGCAATGGCATCCAGATAGG+TGG 0.677774 2_2:-69203529 Msa0267580:CDS
ATTGCATGCATAATTGACAA+GGG 0.759001 2_2:+69203903 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAATTTATGGAAGTTA+TGG + chr2_2:69201682-69201701 None:intergenic 15.0%
!!! TTTTGTTTATTAGTTTGTTA+TGG - chr2_2:69202405-69202424 Msa0267580:intron 15.0%
!!! AAGTGTTCATTTAAATTTTA+CGG - chr2_2:69202778-69202797 Msa0267580:intron 15.0%
!!! AAGTGTTCATTTAAATTTTA+CGG - chr2_2:69202778-69202797 Msa0267580:intron 15.0%
!!! TGATAGATATTTTTTATTGA+AGG - chr2_2:69203649-69203668 Msa0267580:intron 15.0%
!!! GATAGATATTTTTTATTGAA+GGG - chr2_2:69203650-69203669 Msa0267580:intron 15.0%
!! CAATAAGATATATACATATA+TGG + chr2_2:69203849-69203868 None:intergenic 15.0%
!! TAATAAATTTATGGAAGTTA+TGG + chr2_2:69201682-69201701 None:intergenic 15.0%
!!! TTTTGTTTATTAGTTTGTTA+TGG - chr2_2:69202405-69202424 Msa0267580:intron 15.0%
!!! AAGTGTTCATTTAAATTTTA+CGG - chr2_2:69202778-69202797 Msa0267580:intron 15.0%
!!! AAGTGTTCATTTAAATTTTA+CGG - chr2_2:69202778-69202797 Msa0267580:intron 15.0%
!!! TGATAGATATTTTTTATTGA+AGG - chr2_2:69203649-69203668 Msa0267580:intron 15.0%
!!! GATAGATATTTTTTATTGAA+GGG - chr2_2:69203650-69203669 Msa0267580:intron 15.0%
!! CAATAAGATATATACATATA+TGG + chr2_2:69203849-69203868 None:intergenic 15.0%
!! ATATTTATTGAAGCTAAAGT+CGG + chr2_2:69201656-69201675 None:intergenic 20.0%
!! CAAGGGAAATAATAAATTTA+TGG + chr2_2:69201691-69201710 None:intergenic 20.0%
!!! TGTGAATTTTTGTATCATTT+TGG - chr2_2:69202203-69202222 Msa0267580:intron 20.0%
!!! AATTTTTGTATCATTTTGGT+GGG - chr2_2:69202207-69202226 Msa0267580:intron 20.0%
!!! ACATGTTTGTTTCTAATTTT+AGG - chr2_2:69202437-69202456 Msa0267580:intron 20.0%
!! AATGAATGTTGAAAATTTGA+AGG - chr2_2:69202745-69202764 Msa0267580:intron 20.0%
!! TGAAAAGATTAGTAAATGTT+TGG - chr2_2:69203027-69203046 Msa0267580:intron 20.0%
!! CATTTATCTTGTAAATGTAA+AGG + chr2_2:69203569-69203588 None:intergenic 20.0%
!! CTTTACATTTACAAGATAAA+TGG - chr2_2:69203567-69203586 Msa0267580:intron 20.0%
!! AAAAAAAAAAAAAAAGACCC+AGG - chr2_2:69203720-69203739 Msa0267580:CDS 20.0%
!!! GTCTTGAATTTTTAACATAA+AGG - chr2_2:69203777-69203796 Msa0267580:five_prime_UTR 20.0%
!! ATATGTATATATCTTATTGC+AGG - chr2_2:69203850-69203869 Msa0267580:five_prime_UTR 20.0%
!! ATATTTATTGAAGCTAAAGT+CGG + chr2_2:69201656-69201675 None:intergenic 20.0%
!! CAAGGGAAATAATAAATTTA+TGG + chr2_2:69201691-69201710 None:intergenic 20.0%
!!! TGTGAATTTTTGTATCATTT+TGG - chr2_2:69202203-69202222 Msa0267580:intron 20.0%
!!! AATTTTTGTATCATTTTGGT+GGG - chr2_2:69202207-69202226 Msa0267580:intron 20.0%
!!! ACATGTTTGTTTCTAATTTT+AGG - chr2_2:69202437-69202456 Msa0267580:intron 20.0%
!! AATGAATGTTGAAAATTTGA+AGG - chr2_2:69202745-69202764 Msa0267580:intron 20.0%
!! TGAAAAGATTAGTAAATGTT+TGG - chr2_2:69203027-69203046 Msa0267580:intron 20.0%
!! CATTTATCTTGTAAATGTAA+AGG + chr2_2:69203569-69203588 None:intergenic 20.0%
!! CTTTACATTTACAAGATAAA+TGG - chr2_2:69203567-69203586 Msa0267580:intron 20.0%
!! AAAAAAAAAAAAAAAGACCC+AGG - chr2_2:69203720-69203739 Msa0267580:CDS 20.0%
!!! GTCTTGAATTTTTAACATAA+AGG - chr2_2:69203777-69203796 Msa0267580:five_prime_UTR 20.0%
!! ATATGTATATATCTTATTGC+AGG - chr2_2:69203850-69203869 Msa0267580:five_prime_UTR 20.0%
!! AAATGAGACAAGTATGTTTT+TGG + chr2_2:69201778-69201797 None:intergenic 25.0%
!!! CATATTTTATTTCTAGTGCA+TGG - chr2_2:69201843-69201862 Msa0267580:intron 25.0%
! ATTCTTCATTAGATGAGATA+AGG - chr2_2:69201945-69201964 Msa0267580:intron 25.0%
! CAATGCAAATGACAAAAAAA+GGG + chr2_2:69202012-69202031 None:intergenic 25.0%
! ACAATGCAAATGACAAAAAA+AGG + chr2_2:69202013-69202032 None:intergenic 25.0%
!! GAATTTTTGTATCATTTTGG+TGG - chr2_2:69202206-69202225 Msa0267580:intron 25.0%
!!! GTTTTCTGTTTTGTTTTGTT+TGG - chr2_2:69202252-69202271 Msa0267580:intron 25.0%
! ACAATCTTCAAGAAAAACTA+AGG + chr2_2:69202380-69202399 None:intergenic 25.0%
!! TTAGGATTTTTCTGATTTTG+TGG - chr2_2:69202455-69202474 Msa0267580:intron 25.0%
!! CAAGATCAAACTTTTCTAAT+AGG + chr2_2:69202541-69202560 None:intergenic 25.0%
! CTATTAGAAAAGTTTGATCT+TGG - chr2_2:69202539-69202558 Msa0267580:intron 25.0%
! TTAATGAGATTTCATGACTA+TGG - chr2_2:69202584-69202603 Msa0267580:intron 25.0%
! TAATGAGATTTCATGACTAT+GGG - chr2_2:69202585-69202604 Msa0267580:intron 25.0%
!! AATTCAAAATTTTGCACCTT+AGG + chr2_2:69202620-69202639 None:intergenic 25.0%
!!! TCACTTTTTAGATTTGGTTT+GGG + chr2_2:69202662-69202681 None:intergenic 25.0%
!!! ATTCACTCACTTTTTAGATT+TGG + chr2_2:69202668-69202687 None:intergenic 25.0%
! AAAGATAGAGATAAAACACA+TGG - chr2_2:69202709-69202728 Msa0267580:intron 25.0%
! GAATGAATGTTGAAAATTTG+AGG - chr2_2:69202744-69202763 Msa0267580:intron 25.0%
! AAAGATAGAGATAAAACACA+TGG - chr2_2:69202709-69202728 Msa0267580:intron 25.0%
!! GTTCATTTAAATTTTACGGA+AGG - chr2_2:69202782-69202801 Msa0267580:intron 25.0%
!! TGAAAGATTAGTAACAGTTT+TGG - chr2_2:69202981-69203000 Msa0267580:intron 25.0%
! AATGAAAATGAATGAGTAGA+TGG - chr2_2:69203064-69203083 Msa0267580:intron 25.0%
! TTAATAAGACAACTCAGTAA+AGG - chr2_2:69203087-69203106 Msa0267580:intron 25.0%
! TAATAAGACAACTCAGTAAA+GGG - chr2_2:69203088-69203107 Msa0267580:intron 25.0%
!! GGAAAGATTAGTAAATGTTT+TGG - chr2_2:69203112-69203131 Msa0267580:intron 25.0%
! AATGAAAATGAATGAGTAGA+TGG - chr2_2:69203064-69203083 Msa0267580:intron 25.0%
! CTAACTCAATCTTACAAAAA+CGG - chr2_2:69203458-69203477 Msa0267580:intron 25.0%
!! AAATGAGACAAGTATGTTTT+TGG + chr2_2:69201778-69201797 None:intergenic 25.0%
!!! CATATTTTATTTCTAGTGCA+TGG - chr2_2:69201843-69201862 Msa0267580:intron 25.0%
! ATTCTTCATTAGATGAGATA+AGG - chr2_2:69201945-69201964 Msa0267580:intron 25.0%
! CAATGCAAATGACAAAAAAA+GGG + chr2_2:69202012-69202031 None:intergenic 25.0%
! ACAATGCAAATGACAAAAAA+AGG + chr2_2:69202013-69202032 None:intergenic 25.0%
!! GAATTTTTGTATCATTTTGG+TGG - chr2_2:69202206-69202225 Msa0267580:intron 25.0%
!!! GTTTTCTGTTTTGTTTTGTT+TGG - chr2_2:69202252-69202271 Msa0267580:intron 25.0%
! ACAATCTTCAAGAAAAACTA+AGG + chr2_2:69202380-69202399 None:intergenic 25.0%
!! TTAGGATTTTTCTGATTTTG+TGG - chr2_2:69202455-69202474 Msa0267580:intron 25.0%
!! CAAGATCAAACTTTTCTAAT+AGG + chr2_2:69202541-69202560 None:intergenic 25.0%
! CTATTAGAAAAGTTTGATCT+TGG - chr2_2:69202539-69202558 Msa0267580:intron 25.0%
! TTAATGAGATTTCATGACTA+TGG - chr2_2:69202584-69202603 Msa0267580:intron 25.0%
! TAATGAGATTTCATGACTAT+GGG - chr2_2:69202585-69202604 Msa0267580:intron 25.0%
!! AATTCAAAATTTTGCACCTT+AGG + chr2_2:69202620-69202639 None:intergenic 25.0%
!!! TCACTTTTTAGATTTGGTTT+GGG + chr2_2:69202662-69202681 None:intergenic 25.0%
!!! ATTCACTCACTTTTTAGATT+TGG + chr2_2:69202668-69202687 None:intergenic 25.0%
! AAAGATAGAGATAAAACACA+TGG - chr2_2:69202709-69202728 Msa0267580:intron 25.0%
! GAATGAATGTTGAAAATTTG+AGG - chr2_2:69202744-69202763 Msa0267580:intron 25.0%
! AAAGATAGAGATAAAACACA+TGG - chr2_2:69202709-69202728 Msa0267580:intron 25.0%
!! GTTCATTTAAATTTTACGGA+AGG - chr2_2:69202782-69202801 Msa0267580:intron 25.0%
!! TGAAAGATTAGTAACAGTTT+TGG - chr2_2:69202981-69203000 Msa0267580:intron 25.0%
! AATGAAAATGAATGAGTAGA+TGG - chr2_2:69203064-69203083 Msa0267580:intron 25.0%
! TTAATAAGACAACTCAGTAA+AGG - chr2_2:69203087-69203106 Msa0267580:intron 25.0%
! TAATAAGACAACTCAGTAAA+GGG - chr2_2:69203088-69203107 Msa0267580:intron 25.0%
!! GGAAAGATTAGTAAATGTTT+TGG - chr2_2:69203112-69203131 Msa0267580:intron 25.0%
! AATGAAAATGAATGAGTAGA+TGG - chr2_2:69203064-69203083 Msa0267580:intron 25.0%
! CTAACTCAATCTTACAAAAA+CGG - chr2_2:69203458-69203477 Msa0267580:intron 25.0%
TAAAGTCGGTTAATTAGGAA+GGG + chr2_2:69201642-69201661 None:intergenic 30.0%
ATTGCATGCATAATTGACAA+GGG + chr2_2:69201721-69201740 None:intergenic 30.0%
CAACAACTAAAAAGGAATCA+AGG + chr2_2:69201814-69201833 None:intergenic 30.0%
!!! TCCTTTTTAGTTGTTGAGTT+TGG - chr2_2:69201818-69201837 Msa0267580:intron 30.0%
ACCAAACTCAACAACTAAAA+AGG + chr2_2:69201822-69201841 None:intergenic 30.0%
ATGGTTTAAACGAGTTACAA+TGG - chr2_2:69201862-69201881 Msa0267580:intron 30.0%
ACAATGGATGATTATAGTGA+AGG - chr2_2:69201878-69201897 Msa0267580:intron 30.0%
CAATGGATGATTATAGTGAA+GGG - chr2_2:69201879-69201898 Msa0267580:intron 30.0%
TCATCTTACTACAGTATTCT+TGG - chr2_2:69201911-69201930 Msa0267580:intron 30.0%
!! TGAATTTTGATCTGAATGTG+AGG - chr2_2:69202043-69202062 Msa0267580:intron 30.0%
!! TATGTTCTGAAATTTACGCT+TGG + chr2_2:69202146-69202165 None:intergenic 30.0%
AACATACAAGAAGCTTATTC+AGG - chr2_2:69202160-69202179 Msa0267580:intron 30.0%
! TCGTACATAGTTCTTTTCTT+GGG + chr2_2:69202294-69202313 None:intergenic 30.0%
! ATCGTACATAGTTCTTTTCT+TGG + chr2_2:69202295-69202314 None:intergenic 30.0%
! CAAACTTTTCTAATAGGAAG+TGG + chr2_2:69202535-69202554 None:intergenic 30.0%
!!! CTCACTTTTTAGATTTGGTT+TGG + chr2_2:69202663-69202682 None:intergenic 30.0%
TGAAAAGACAACTCAGTAAA+GGG - chr2_2:69202958-69202977 Msa0267580:intron 30.0%
ATCAAAAGACAACTCAGTAA+GGG - chr2_2:69203004-69203023 Msa0267580:intron 30.0%
AATCTTAGACTTAGAAATCG+TGG - chr2_2:69203195-69203214 Msa0267580:intron 30.0%
! CGTTTTTGTAAGATTGAGTT+AGG + chr2_2:69203460-69203479 None:intergenic 30.0%
TTAAAAGTCTCACATCAGAT+AGG + chr2_2:69203533-69203552 None:intergenic 30.0%
ATATATCTTATTGCAGGAGA+AGG - chr2_2:69203856-69203875 Msa0267580:five_prime_UTR 30.0%
TAAAGTCGGTTAATTAGGAA+GGG + chr2_2:69201642-69201661 None:intergenic 30.0%
ATTGCATGCATAATTGACAA+GGG + chr2_2:69201721-69201740 None:intergenic 30.0%
CAACAACTAAAAAGGAATCA+AGG + chr2_2:69201814-69201833 None:intergenic 30.0%
!!! TCCTTTTTAGTTGTTGAGTT+TGG - chr2_2:69201818-69201837 Msa0267580:intron 30.0%
ACCAAACTCAACAACTAAAA+AGG + chr2_2:69201822-69201841 None:intergenic 30.0%
ATGGTTTAAACGAGTTACAA+TGG - chr2_2:69201862-69201881 Msa0267580:intron 30.0%
ACAATGGATGATTATAGTGA+AGG - chr2_2:69201878-69201897 Msa0267580:intron 30.0%
CAATGGATGATTATAGTGAA+GGG - chr2_2:69201879-69201898 Msa0267580:intron 30.0%
TCATCTTACTACAGTATTCT+TGG - chr2_2:69201911-69201930 Msa0267580:intron 30.0%
!! TGAATTTTGATCTGAATGTG+AGG - chr2_2:69202043-69202062 Msa0267580:intron 30.0%
!! TATGTTCTGAAATTTACGCT+TGG + chr2_2:69202146-69202165 None:intergenic 30.0%
AACATACAAGAAGCTTATTC+AGG - chr2_2:69202160-69202179 Msa0267580:intron 30.0%
! TCGTACATAGTTCTTTTCTT+GGG + chr2_2:69202294-69202313 None:intergenic 30.0%
! ATCGTACATAGTTCTTTTCT+TGG + chr2_2:69202295-69202314 None:intergenic 30.0%
! CAAACTTTTCTAATAGGAAG+TGG + chr2_2:69202535-69202554 None:intergenic 30.0%
!!! CTCACTTTTTAGATTTGGTT+TGG + chr2_2:69202663-69202682 None:intergenic 30.0%
TGAAAAGACAACTCAGTAAA+GGG - chr2_2:69202958-69202977 Msa0267580:intron 30.0%
ATCAAAAGACAACTCAGTAA+GGG - chr2_2:69203004-69203023 Msa0267580:intron 30.0%
AATCTTAGACTTAGAAATCG+TGG - chr2_2:69203195-69203214 Msa0267580:intron 30.0%
! CGTTTTTGTAAGATTGAGTT+AGG + chr2_2:69203460-69203479 None:intergenic 30.0%
TTAAAAGTCTCACATCAGAT+AGG + chr2_2:69203533-69203552 None:intergenic 30.0%
ATATATCTTATTGCAGGAGA+AGG - chr2_2:69203856-69203875 Msa0267580:five_prime_UTR 30.0%
CTAAAGTCGGTTAATTAGGA+AGG + chr2_2:69201643-69201662 None:intergenic 35.0%
GAAGCTAAAGTCGGTTAATT+AGG + chr2_2:69201647-69201666 None:intergenic 35.0%
ATGCATAATTGACAAGGGAA+CGG + chr2_2:69201716-69201735 None:intergenic 35.0%
GATTGCATGCATAATTGACA+AGG + chr2_2:69201722-69201741 None:intergenic 35.0%
CTGTAGTAAGATGACGATAA+TGG + chr2_2:69201905-69201924 None:intergenic 35.0%
AATTTCAATGCATGCAGCAA+TGG - chr2_2:69202077-69202096 Msa0267580:intron 35.0%
TTGGCTTCACTCAATAAAGA+AGG + chr2_2:69202127-69202146 None:intergenic 35.0%
AAAAGAACTATGTACGATGC+TGG - chr2_2:69202297-69202316 Msa0267580:intron 35.0%
! TTCTGATTTTGTGGACGAAA+TGG - chr2_2:69202464-69202483 Msa0267580:intron 35.0%
CTATGGGTACTTATATCCTA+AGG - chr2_2:69202601-69202620 Msa0267580:intron 35.0%
GAAGGTAACAACTCAGTAAA+GGG - chr2_2:69202935-69202954 Msa0267580:intron 35.0%
GTGAAAAGACAACTCAGTAA+AGG - chr2_2:69202957-69202976 Msa0267580:intron 35.0%
GATCAAAAGACAACTCAGTA+AGG - chr2_2:69203003-69203022 Msa0267580:intron 35.0%
TTAGACTTAGAAATCGTGGT+TGG - chr2_2:69203199-69203218 Msa0267580:intron 35.0%
!!! TAAGCTGGTTTTGTTGAGTT+GGG + chr2_2:69203231-69203250 None:intergenic 35.0%
!!! ATAAGCTGGTTTTGTTGAGT+TGG + chr2_2:69203232-69203251 None:intergenic 35.0%
AGCGAAAACTTAATAGCAGA+TGG - chr2_2:69203382-69203401 Msa0267580:intron 35.0%
CTTAATAGCAGATGGTCTAA+CGG - chr2_2:69203390-69203409 Msa0267580:intron 35.0%
TGATACCATCTTAGAAATCG+TGG - chr2_2:69203429-69203448 Msa0267580:intron 35.0%
AAACTGTGCTGCAAGTTTAA+AGG + chr2_2:69203614-69203633 None:intergenic 35.0%
TTATTGCAGGAGAAGGTTTA+TGG - chr2_2:69203863-69203882 Msa0267580:five_prime_UTR 35.0%
AGAGTCCTTCAATGTATTGT+GGG - chr2_2:69203933-69203952 Msa0267580:five_prime_UTR 35.0%
AAGGATTCATCAACCATAGA+CGG + chr2_2:69203962-69203981 None:intergenic 35.0%
CTAAAGTCGGTTAATTAGGA+AGG + chr2_2:69201643-69201662 None:intergenic 35.0%
GAAGCTAAAGTCGGTTAATT+AGG + chr2_2:69201647-69201666 None:intergenic 35.0%
ATGCATAATTGACAAGGGAA+CGG + chr2_2:69201716-69201735 None:intergenic 35.0%
GATTGCATGCATAATTGACA+AGG + chr2_2:69201722-69201741 None:intergenic 35.0%
CTGTAGTAAGATGACGATAA+TGG + chr2_2:69201905-69201924 None:intergenic 35.0%
AATTTCAATGCATGCAGCAA+TGG - chr2_2:69202077-69202096 Msa0267580:intron 35.0%
TTGGCTTCACTCAATAAAGA+AGG + chr2_2:69202127-69202146 None:intergenic 35.0%
AAAAGAACTATGTACGATGC+TGG - chr2_2:69202297-69202316 Msa0267580:intron 35.0%
! TTCTGATTTTGTGGACGAAA+TGG - chr2_2:69202464-69202483 Msa0267580:intron 35.0%
CTATGGGTACTTATATCCTA+AGG - chr2_2:69202601-69202620 Msa0267580:intron 35.0%
GAAGGTAACAACTCAGTAAA+GGG - chr2_2:69202935-69202954 Msa0267580:intron 35.0%
GTGAAAAGACAACTCAGTAA+AGG - chr2_2:69202957-69202976 Msa0267580:intron 35.0%
GATCAAAAGACAACTCAGTA+AGG - chr2_2:69203003-69203022 Msa0267580:intron 35.0%
TTAGACTTAGAAATCGTGGT+TGG - chr2_2:69203199-69203218 Msa0267580:intron 35.0%
!!! TAAGCTGGTTTTGTTGAGTT+GGG + chr2_2:69203231-69203250 None:intergenic 35.0%
!!! ATAAGCTGGTTTTGTTGAGT+TGG + chr2_2:69203232-69203251 None:intergenic 35.0%
AGCGAAAACTTAATAGCAGA+TGG - chr2_2:69203382-69203401 Msa0267580:intron 35.0%
CTTAATAGCAGATGGTCTAA+CGG - chr2_2:69203390-69203409 Msa0267580:intron 35.0%
TGATACCATCTTAGAAATCG+TGG - chr2_2:69203429-69203448 Msa0267580:intron 35.0%
AAACTGTGCTGCAAGTTTAA+AGG + chr2_2:69203614-69203633 None:intergenic 35.0%
TTATTGCAGGAGAAGGTTTA+TGG - chr2_2:69203863-69203882 Msa0267580:five_prime_UTR 35.0%
AGAGTCCTTCAATGTATTGT+GGG - chr2_2:69203933-69203952 Msa0267580:five_prime_UTR 35.0%
AAGGATTCATCAACCATAGA+CGG + chr2_2:69203962-69203981 None:intergenic 35.0%
ATGAGATAAGGCGTGCTTAT+AGG - chr2_2:69201957-69201976 Msa0267580:intron 40.0%
!! TGCTTATAGGAAGCTTGCTA+TGG - chr2_2:69201970-69201989 Msa0267580:intron 40.0%
GGAAGGTAACAACTCAGTAA+AGG - chr2_2:69202934-69202953 Msa0267580:intron 40.0%
TAAGACAACTCAGTAAAGGG+TGG - chr2_2:69203091-69203110 Msa0267580:intron 40.0%
CTCAACAAAACCAGCTTATG+AGG - chr2_2:69203233-69203252 Msa0267580:intron 40.0%
AACAAAACCAGCTTATGAGG+TGG - chr2_2:69203236-69203255 Msa0267580:intron 40.0%
ACAAAACCAGCTTATGAGGT+GGG - chr2_2:69203237-69203256 Msa0267580:intron 40.0%
TAAAGAGTCCCACATCGAAT+AGG + chr2_2:69203300-69203319 None:intergenic 40.0%
ATATGGGGCATGGACATAAA+TGG - chr2_2:69203346-69203365 Msa0267580:intron 40.0%
ACCATCTTAGAAATCGTGGT+TGG - chr2_2:69203433-69203452 Msa0267580:intron 40.0%
CCATCTTAGAAATCGTGGTT+GGG - chr2_2:69203434-69203453 Msa0267580:intron 40.0%
ACAGACATTCTTAGGGGTTT+AGG - chr2_2:69203745-69203764 Msa0267580:exon 40.0%
GGAGAAGGTTTATGGTTTAG+AGG - chr2_2:69203871-69203890 Msa0267580:five_prime_UTR 40.0%
TTATGGTTTAGAGGAGTTGC+AGG - chr2_2:69203880-69203899 Msa0267580:five_prime_UTR 40.0%
GAGAGTCCTTCAATGTATTG+TGG - chr2_2:69203932-69203951 Msa0267580:five_prime_UTR 40.0%
GATGAATCCTTTGCTAAGAG+AGG - chr2_2:69203971-69203990 Msa0267580:five_prime_UTR 40.0%
AACACTTCCTCTCTTAGCAA+AGG + chr2_2:69203981-69204000 None:intergenic 40.0%
ATGAGATAAGGCGTGCTTAT+AGG - chr2_2:69201957-69201976 Msa0267580:intron 40.0%
!! TGCTTATAGGAAGCTTGCTA+TGG - chr2_2:69201970-69201989 Msa0267580:intron 40.0%
GGAAGGTAACAACTCAGTAA+AGG - chr2_2:69202934-69202953 Msa0267580:intron 40.0%
TAAGACAACTCAGTAAAGGG+TGG - chr2_2:69203091-69203110 Msa0267580:intron 40.0%
CTCAACAAAACCAGCTTATG+AGG - chr2_2:69203233-69203252 Msa0267580:intron 40.0%
AACAAAACCAGCTTATGAGG+TGG - chr2_2:69203236-69203255 Msa0267580:intron 40.0%
ACAAAACCAGCTTATGAGGT+GGG - chr2_2:69203237-69203256 Msa0267580:intron 40.0%
TAAAGAGTCCCACATCGAAT+AGG + chr2_2:69203300-69203319 None:intergenic 40.0%
ATATGGGGCATGGACATAAA+TGG - chr2_2:69203346-69203365 Msa0267580:intron 40.0%
ACCATCTTAGAAATCGTGGT+TGG - chr2_2:69203433-69203452 Msa0267580:intron 40.0%
CCATCTTAGAAATCGTGGTT+GGG - chr2_2:69203434-69203453 Msa0267580:intron 40.0%
ACAGACATTCTTAGGGGTTT+AGG - chr2_2:69203745-69203764 Msa0267580:exon 40.0%
GGAGAAGGTTTATGGTTTAG+AGG - chr2_2:69203871-69203890 Msa0267580:five_prime_UTR 40.0%
TTATGGTTTAGAGGAGTTGC+AGG - chr2_2:69203880-69203899 Msa0267580:five_prime_UTR 40.0%
GAGAGTCCTTCAATGTATTG+TGG - chr2_2:69203932-69203951 Msa0267580:five_prime_UTR 40.0%
GATGAATCCTTTGCTAAGAG+AGG - chr2_2:69203971-69203990 Msa0267580:five_prime_UTR 40.0%
AACACTTCCTCTCTTAGCAA+AGG + chr2_2:69203981-69204000 None:intergenic 40.0%
TTGACAAGGGAACGGAACAA+GGG + chr2_2:69201708-69201727 None:intergenic 45.0%
ATTGACAAGGGAACGGAACA+AGG + chr2_2:69201709-69201728 None:intergenic 45.0%
! TGGCTTGTATGATCCTCAAG+AGG - chr2_2:69202317-69202336 Msa0267580:intron 45.0%
TCCTCAAGAGGAAGAAGATG+AGG - chr2_2:69202329-69202348 Msa0267580:intron 45.0%
ACCTCATCTTCTTCCTCTTG+AGG + chr2_2:69202333-69202352 None:intergenic 45.0%
TGTCCCTTATGGCTGAAGTT+AGG - chr2_2:69202487-69202506 Msa0267580:intron 45.0%
TCGCCTAACTTCAGCCATAA+GGG + chr2_2:69202493-69202512 None:intergenic 45.0%
CAAAACCAGCTTATGAGGTG+GGG - chr2_2:69203238-69203257 Msa0267580:intron 45.0%
AGACCATCTCCTATTCGATG+TGG - chr2_2:69203288-69203307 Msa0267580:intron 45.0%
GACCATCTCCTATTCGATGT+GGG - chr2_2:69203289-69203308 Msa0267580:intron 45.0%
!! ATGTCTAGTCTTGGACGCAA+GGG + chr2_2:69203328-69203347 None:intergenic 45.0%
!! TATGTCTAGTCTTGGACGCA+AGG + chr2_2:69203329-69203348 None:intergenic 45.0%
TGCGTCCAAGACTAGACATA+TGG - chr2_2:69203329-69203348 Msa0267580:CDS 45.0%
GCGTCCAAGACTAGACATAT+GGG - chr2_2:69203330-69203349 Msa0267580:CDS 45.0%
CGTCCAAGACTAGACATATG+GGG - chr2_2:69203331-69203350 Msa0267580:CDS 45.0%
ATGCCCCATATGTCTAGTCT+TGG + chr2_2:69203337-69203356 None:intergenic 45.0%
AAGACTAGACATATGGGGCA+TGG - chr2_2:69203336-69203355 Msa0267580:CDS 45.0%
! GATGGTCTAACGGATCTTAG+AGG - chr2_2:69203400-69203419 Msa0267580:intron 45.0%
! CCCAACCACGATTTCTAAGA+TGG + chr2_2:69203437-69203456 None:intergenic 45.0%
CAAAAACGGTTTGTGAGACG+AGG - chr2_2:69203472-69203491 Msa0267580:CDS 45.0%
CCTAAGAATGTCTGTGACCT+GGG + chr2_2:69203740-69203759 None:intergenic 45.0%
CCAGGTCACAGACATTCTTA+GGG - chr2_2:69203738-69203757 Msa0267580:CDS 45.0%
CAGGTCACAGACATTCTTAG+GGG - chr2_2:69203739-69203758 Msa0267580:CDS 45.0%
ATGTTCATGGAGATGGCTGA+AGG - chr2_2:69203905-69203924 Msa0267580:five_prime_UTR 45.0%
GGTGTCCCACAATACATTGA+AGG + chr2_2:69203941-69203960 None:intergenic 45.0%
TTGACAAGGGAACGGAACAA+GGG + chr2_2:69201708-69201727 None:intergenic 45.0%
ATTGACAAGGGAACGGAACA+AGG + chr2_2:69201709-69201728 None:intergenic 45.0%
! TGGCTTGTATGATCCTCAAG+AGG - chr2_2:69202317-69202336 Msa0267580:intron 45.0%
TCCTCAAGAGGAAGAAGATG+AGG - chr2_2:69202329-69202348 Msa0267580:intron 45.0%
ACCTCATCTTCTTCCTCTTG+AGG + chr2_2:69202333-69202352 None:intergenic 45.0%
TGTCCCTTATGGCTGAAGTT+AGG - chr2_2:69202487-69202506 Msa0267580:intron 45.0%
TCGCCTAACTTCAGCCATAA+GGG + chr2_2:69202493-69202512 None:intergenic 45.0%
CAAAACCAGCTTATGAGGTG+GGG - chr2_2:69203238-69203257 Msa0267580:intron 45.0%
AGACCATCTCCTATTCGATG+TGG - chr2_2:69203288-69203307 Msa0267580:intron 45.0%
GACCATCTCCTATTCGATGT+GGG - chr2_2:69203289-69203308 Msa0267580:intron 45.0%
!! ATGTCTAGTCTTGGACGCAA+GGG + chr2_2:69203328-69203347 None:intergenic 45.0%
!! TATGTCTAGTCTTGGACGCA+AGG + chr2_2:69203329-69203348 None:intergenic 45.0%
TGCGTCCAAGACTAGACATA+TGG - chr2_2:69203329-69203348 Msa0267580:CDS 45.0%
GCGTCCAAGACTAGACATAT+GGG - chr2_2:69203330-69203349 Msa0267580:CDS 45.0%
CGTCCAAGACTAGACATATG+GGG - chr2_2:69203331-69203350 Msa0267580:CDS 45.0%
ATGCCCCATATGTCTAGTCT+TGG + chr2_2:69203337-69203356 None:intergenic 45.0%
AAGACTAGACATATGGGGCA+TGG - chr2_2:69203336-69203355 Msa0267580:CDS 45.0%
! GATGGTCTAACGGATCTTAG+AGG - chr2_2:69203400-69203419 Msa0267580:intron 45.0%
! CCCAACCACGATTTCTAAGA+TGG + chr2_2:69203437-69203456 None:intergenic 45.0%
CAAAAACGGTTTGTGAGACG+AGG - chr2_2:69203472-69203491 Msa0267580:CDS 45.0%
CCTAAGAATGTCTGTGACCT+GGG + chr2_2:69203740-69203759 None:intergenic 45.0%
CCAGGTCACAGACATTCTTA+GGG - chr2_2:69203738-69203757 Msa0267580:CDS 45.0%
CAGGTCACAGACATTCTTAG+GGG - chr2_2:69203739-69203758 Msa0267580:CDS 45.0%
ATGTTCATGGAGATGGCTGA+AGG - chr2_2:69203905-69203924 Msa0267580:five_prime_UTR 45.0%
GGTGTCCCACAATACATTGA+AGG + chr2_2:69203941-69203960 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG + chr2_2:69203715-69203734 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTTG+TGG + chr2_2:69203715-69203734 None:intergenic 5.0%
TGCAGCAATGGCATCCAGAT+AGG - chr2_2:69202089-69202108 Msa0267580:intron 50.0%
AGCAATGGCATCCAGATAGG+TGG - chr2_2:69202092-69202111 Msa0267580:intron 50.0%
GGTGTTCTTGTCCACCTATC+TGG + chr2_2:69202106-69202125 None:intergenic 50.0%
GGACGAAATGGTGTCCCTTA+TGG - chr2_2:69202476-69202495 Msa0267580:intron 50.0%
CTCGCCTAACTTCAGCCATA+AGG + chr2_2:69202494-69202513 None:intergenic 50.0%
TATGGCTGAAGTTAGGCGAG+AGG - chr2_2:69202494-69202513 Msa0267580:intron 50.0%
ACAATCCCCACCTCATAAGC+TGG + chr2_2:69203246-69203265 None:intergenic 50.0%
GTCCCACATCGAATAGGAGA+TGG + chr2_2:69203294-69203313 None:intergenic 50.0%
!! TGTCTAGTCTTGGACGCAAG+GGG + chr2_2:69203327-69203346 None:intergenic 50.0%
TGGGGCATGGACATAAATGG+TGG - chr2_2:69203349-69203368 Msa0267580:intron 50.0%
GGGGCATGGACATAAATGGT+GGG - chr2_2:69203350-69203369 Msa0267580:intron 50.0%
! GCATGGACATAAATGGTGGG+TGG - chr2_2:69203353-69203372 Msa0267580:intron 50.0%
CCCAGGTCACAGACATTCTT+AGG - chr2_2:69203737-69203756 Msa0267580:CDS 50.0%
CCCTAAGAATGTCTGTGACC+TGG + chr2_2:69203741-69203760 None:intergenic 50.0%
GGAGTTGCAGGACATGTTCA+TGG - chr2_2:69203892-69203911 Msa0267580:five_prime_UTR 50.0%
GCAGGACATGTTCATGGAGA+TGG - chr2_2:69203898-69203917 Msa0267580:five_prime_UTR 50.0%
GTATTGTGGGACACCGTCTA+TGG - chr2_2:69203946-69203965 Msa0267580:five_prime_UTR 50.0%
TGCAGCAATGGCATCCAGAT+AGG - chr2_2:69202089-69202108 Msa0267580:intron 50.0%
AGCAATGGCATCCAGATAGG+TGG - chr2_2:69202092-69202111 Msa0267580:intron 50.0%
GGTGTTCTTGTCCACCTATC+TGG + chr2_2:69202106-69202125 None:intergenic 50.0%
GGACGAAATGGTGTCCCTTA+TGG - chr2_2:69202476-69202495 Msa0267580:intron 50.0%
CTCGCCTAACTTCAGCCATA+AGG + chr2_2:69202494-69202513 None:intergenic 50.0%
TATGGCTGAAGTTAGGCGAG+AGG - chr2_2:69202494-69202513 Msa0267580:intron 50.0%
ACAATCCCCACCTCATAAGC+TGG + chr2_2:69203246-69203265 None:intergenic 50.0%
GTCCCACATCGAATAGGAGA+TGG + chr2_2:69203294-69203313 None:intergenic 50.0%
!! TGTCTAGTCTTGGACGCAAG+GGG + chr2_2:69203327-69203346 None:intergenic 50.0%
TGGGGCATGGACATAAATGG+TGG - chr2_2:69203349-69203368 Msa0267580:intron 50.0%
GGGGCATGGACATAAATGGT+GGG - chr2_2:69203350-69203369 Msa0267580:intron 50.0%
! GCATGGACATAAATGGTGGG+TGG - chr2_2:69203353-69203372 Msa0267580:intron 50.0%
CCCAGGTCACAGACATTCTT+AGG - chr2_2:69203737-69203756 Msa0267580:CDS 50.0%
CCCTAAGAATGTCTGTGACC+TGG + chr2_2:69203741-69203760 None:intergenic 50.0%
GGAGTTGCAGGACATGTTCA+TGG - chr2_2:69203892-69203911 Msa0267580:five_prime_UTR 50.0%
GCAGGACATGTTCATGGAGA+TGG - chr2_2:69203898-69203917 Msa0267580:five_prime_UTR 50.0%
GTATTGTGGGACACCGTCTA+TGG - chr2_2:69203946-69203965 Msa0267580:five_prime_UTR 50.0%
!! GTCTAGTCTTGGACGCAAGG+GGG + chr2_2:69203326-69203345 None:intergenic 55.0%
!! GTCTAGTCTTGGACGCAAGG+GGG + chr2_2:69203326-69203345 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 69201631 69204012 69201631 ID=Msa0267580;Name=Msa0267580
chr2_2 mRNA 69201631 69204012 69201631 ID=Msa0267580-mRNA-1;Parent=Msa0267580;Name=Msa0267580-mRNA-1;_AED=0.15;_eAED=0.15;_QI=250|1|0.8|1|1|1|5|0|155
chr2_2 exon 69201631 69201771 69201631 ID=Msa0267580-mRNA-1:exon:22074;Parent=Msa0267580-mRNA-1
chr2_2 exon 69203128 69203184 69203128 ID=Msa0267580-mRNA-1:exon:22073;Parent=Msa0267580-mRNA-1
chr2_2 exon 69203293 69203363 69203293 ID=Msa0267580-mRNA-1:exon:22072;Parent=Msa0267580-mRNA-1
chr2_2 exon 69203462 69203549 69203462 ID=Msa0267580-mRNA-1:exon:22071;Parent=Msa0267580-mRNA-1
chr2_2 exon 69203652 69204012 69203652 ID=Msa0267580-mRNA-1:exon:22070;Parent=Msa0267580-mRNA-1
chr2_2 five_prime_UTR 69203763 69204012 69203763 ID=Msa0267580-mRNA-1:five_prime_utr;Parent=Msa0267580-mRNA-1
chr2_2 CDS 69203652 69203762 69203652 ID=Msa0267580-mRNA-1:cds;Parent=Msa0267580-mRNA-1
chr2_2 CDS 69203462 69203549 69203462 ID=Msa0267580-mRNA-1:cds;Parent=Msa0267580-mRNA-1
chr2_2 CDS 69203293 69203363 69203293 ID=Msa0267580-mRNA-1:cds;Parent=Msa0267580-mRNA-1
chr2_2 CDS 69203128 69203184 69203128 ID=Msa0267580-mRNA-1:cds;Parent=Msa0267580-mRNA-1
chr2_2 CDS 69201631 69201771 69201631 ID=Msa0267580-mRNA-1:cds;Parent=Msa0267580-mRNA-1
Gene Sequence

>Msa0267580

ATGGATGATTATAGTGAAGGGCCATTATCGTCATCTTACTACAGTATTCTTGGTGTTAGTTCTGATTCTTCATTAGATGAGATAAGGCGTGCTTATAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAGAACACCTTCTTTATTGAGTGAAGCCAAGCGTAAATTTCAGAACATACAAGAAGCTTATTCAGTGCTATCTGATCCCAAGAAAAGAACTATGTACGATGCTGGCTTGTATGATCCTCAAGAGGAAGAAGATGAGGATTTTTCTGATTTTGTGGACGAAATGGTGTCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTAGAGGAGTTGCAGGACATGTTCATGGAGATGGCTGAAGGATTTGAGAGTCCTTCAATGTATTGTGGGACACCGTCTATGGTTGATGAATCCTTTGCTAAGAGAGGAAGTGTTTTGACACGATAA
Protein sequence

>Msa0267580

MDDYSEGPLSSSYYSILGVSSDSSLDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKRKFQNIQEAYSVLSDPKKRTMYDAGLYDPQEEEDEDFSDFVDEMVSLMAEVRREEKVYGLEELQDMFMEMAEGFESPSMYCGTPSMVDESFAKRGSVLTR*