AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0693730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693730 MtrunA17_Chr4g0044331 93.548 155 10 0 1 155 1 155 3.16e-97 277
Msa0693730 MtrunA17_Chr7g0271891 62.069 116 42 1 13 128 17 130 8.96e-48 152
Msa0693730 MtrunA17_Chr8g0344721 45.968 124 63 3 5 125 3 125 1.30e-33 118
Msa0693730 MtrunA17_Chr3g0138471 44.828 87 41 2 13 95 5 88 2.18e-17 77.4
Msa0693730 MtrunA17_Chr2g0282741 48.571 70 33 1 9 78 1 67 8.15e-17 75.9
Msa0693730 MtrunA17_Chr2g0282761 53.030 66 28 1 13 78 5 67 1.04e-16 75.5
Msa0693730 MtrunA17_Chr5g0415731 40.404 99 54 2 10 103 3 101 1.25e-16 72.0
Msa0693730 MtrunA17_Chr4g0040501 50.000 66 30 1 13 78 5 67 1.48e-16 75.1
Msa0693730 MtrunA17_Chr1g0159491 52.941 68 28 1 13 80 7 70 2.70e-16 69.3
Msa0693730 MtrunA17_Chr4g0006391 48.485 66 31 1 13 78 5 67 5.20e-16 73.6
Msa0693730 MtrunA17_Chr4g0061421 49.254 67 34 0 13 79 9 75 2.48e-15 72.0
Msa0693730 MtrunA17_Chr7g0263971 52.941 68 29 1 13 80 370 434 3.92e-15 71.6
Msa0693730 MtrunA17_Chr2g0324921 47.143 70 34 1 9 78 1 67 4.17e-15 70.9
Msa0693730 MtrunA17_Chr5g0426951 50.746 67 29 1 12 78 83 145 8.00e-15 70.5
Msa0693730 MtrunA17_Chr7g0269841 53.731 67 27 2 12 78 26 88 1.30e-14 69.7
Msa0693730 MtrunA17_Chr1g0209551 44.286 70 35 1 14 83 18 83 1.05e-13 67.4
Msa0693730 MtrunA17_Chr1g0159511 52.941 68 28 1 11 78 5 68 1.14e-13 67.0
Msa0693730 MtrunA17_Chr4g0021141 45.455 66 32 1 13 78 23 84 1.57e-13 63.5
Msa0693730 MtrunA17_Chr8g0334811 43.038 79 33 2 4 78 2 72 1.75e-13 66.6
Msa0693730 MtrunA17_Chr5g0399201 47.692 65 33 1 14 78 14 77 4.23e-13 65.9
Msa0693730 MtrunA17_Chr3g0123861 49.315 73 28 3 13 81 83 150 6.48e-13 65.1
Msa0693730 MtrunA17_Chr6g0478651 36.607 112 58 4 13 116 69 175 6.69e-13 65.1
Msa0693730 MtrunA17_Chr5g0427221 48.529 68 31 1 13 80 49 112 9.44e-13 62.0
Msa0693730 MtrunA17_Chr4g0010781 45.333 75 37 1 4 78 78 148 1.01e-12 64.7
Msa0693730 MtrunA17_Chr2g0333221 50.725 69 29 2 10 78 68 131 1.20e-12 64.3
Msa0693730 MtrunA17_Chr3g0087741 41.333 75 40 1 4 78 81 151 2.07e-12 63.5
Msa0693730 MtrunA17_Chr8g0378161 43.284 67 36 1 12 78 60 124 3.07e-12 61.6
Msa0693730 MtrunA17_Chr6g0460461 38.806 67 40 1 13 78 3 69 3.68e-12 61.6
Msa0693730 MtrunA17_Chr1g0173931 44.118 68 34 2 11 78 37 100 2.24e-11 60.1
Msa0693730 MtrunA17_Chr5g0393371 47.826 69 32 1 11 79 5 69 2.49e-11 60.5
Msa0693730 MtrunA17_Chr5g0414471 37.975 79 45 1 14 92 27 101 3.26e-11 60.1
Msa0693730 MtrunA17_Chr7g0258061 44.776 67 33 2 12 78 22 84 4.79e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0693730 AT1G71000.1 59.231 130 51 1 6 135 2 129 2.04e-47 151
Msa0693730 AT1G71000.2 55.932 118 50 1 6 123 2 117 1.35e-41 137
Msa0693730 AT1G56300.1 57.500 120 49 1 9 128 10 127 2.18e-41 136
Msa0693730 AT1G56300.2 61.616 99 38 0 9 107 10 108 2.20e-38 127
Msa0693730 AT3G14200.1 43.089 123 66 3 9 128 9 130 8.90e-31 111
Msa0693730 AT1G72416.3 43.617 94 51 2 14 107 7 98 3.43e-22 88.2
Msa0693730 AT1G72416.2 43.617 94 51 2 14 107 7 98 4.94e-22 87.4
Msa0693730 AT1G72416.1 43.617 94 51 2 14 107 7 98 4.98e-22 87.4
Msa0693730 AT1G72416.4 43.617 94 51 2 14 107 7 98 4.99e-22 87.4
Msa0693730 AT5G25530.2 51.515 66 29 1 13 78 5 67 1.40e-17 78.2
Msa0693730 AT4G28480.2 47.143 70 34 1 9 78 1 67 3.47e-16 73.9
Msa0693730 AT3G08910.1 50.000 66 30 1 13 78 5 67 3.95e-16 73.9
Msa0693730 AT5G01390.3 50.000 66 30 1 13 78 5 67 4.41e-16 72.8
Msa0693730 AT1G59725.1 48.485 66 32 1 13 78 5 68 4.90e-16 73.9
Msa0693730 AT5G01390.4 50.000 66 30 1 13 78 5 67 5.90e-16 72.4
Msa0693730 AT4G28480.1 47.143 70 34 1 9 78 1 67 6.44e-16 73.6
Msa0693730 AT5G01390.2 50.000 66 30 1 13 78 5 67 7.15e-16 72.8
Msa0693730 AT1G10350.1 45.455 66 33 1 13 78 5 67 9.53e-16 73.2
Msa0693730 AT5G01390.1 50.000 66 30 1 13 78 5 67 1.25e-15 72.8
Msa0693730 AT1G74250.1 50.000 68 33 1 13 79 12 79 3.98e-15 72.0
Msa0693730 AT3G47940.1 47.143 70 35 1 9 78 1 68 4.32e-15 71.2
Msa0693730 AT5G25530.1 45.946 74 29 2 13 78 5 75 5.68e-15 71.2
Msa0693730 AT2G20560.1 48.485 66 31 1 13 78 5 67 7.72e-15 70.5
Msa0693730 AT5G16650.1 46.429 84 39 3 1 83 1 79 2.49e-14 65.9
Msa0693730 AT5G16650.2 46.429 84 39 3 1 83 1 79 4.69e-14 66.2
Msa0693730 AT5G03160.1 45.588 68 34 1 13 80 371 435 7.59e-14 68.2
Msa0693730 AT2G22360.1 43.617 94 44 3 13 102 87 175 8.93e-14 67.8
Msa0693730 AT4G13830.1 42.857 70 38 1 12 81 66 133 2.77e-13 63.9
Msa0693730 AT5G06910.1 33.129 163 83 7 7 147 23 181 5.38e-13 65.1
Msa0693730 AT4G13830.3 42.857 70 38 1 12 81 66 133 7.32e-13 63.5
Msa0693730 AT4G13830.2 42.857 70 38 1 12 81 66 133 1.01e-12 63.2
Msa0693730 AT3G62600.1 46.377 69 33 1 10 78 24 88 1.05e-12 64.7
Msa0693730 AT2G33735.1 45.455 66 32 1 13 78 23 84 1.23e-12 61.2
Msa0693730 AT2G33735.2 45.455 66 32 1 13 78 23 84 1.23e-12 61.2
Msa0693730 AT4G39150.3 50.000 68 30 1 11 78 5 68 1.61e-12 64.3
Msa0693730 AT4G39150.1 50.000 68 30 1 11 78 5 68 1.61e-12 64.3
Msa0693730 AT4G39150.2 50.000 68 30 1 11 78 5 68 1.61e-12 64.3
Msa0693730 AT2G41000.1 37.681 69 42 1 13 80 4 72 3.84e-12 61.6
Msa0693730 AT4G09350.1 47.887 71 32 2 12 81 106 172 4.59e-12 62.4
Msa0693730 AT1G80030.4 47.826 69 31 2 10 78 73 136 5.27e-12 62.8
Msa0693730 AT1G80030.2 47.826 69 31 2 10 78 73 136 6.37e-12 62.8
Msa0693730 AT1G80030.3 47.826 69 31 2 10 78 73 136 6.37e-12 62.8
Msa0693730 AT1G80030.1 47.826 69 31 2 10 78 73 136 6.37e-12 62.8
Msa0693730 AT2G41000.2 37.681 69 42 1 13 80 4 72 6.54e-12 61.2
Msa0693730 AT2G35720.1 43.056 72 40 1 7 78 10 80 6.72e-12 62.8
Msa0693730 AT1G28210.3 38.554 83 47 1 12 94 48 126 6.92e-12 62.4
Msa0693730 AT1G28210.1 38.554 83 47 1 12 94 48 126 7.05e-12 62.4
Msa0693730 AT1G68370.1 44.615 65 32 1 14 78 19 79 8.32e-12 62.4
Msa0693730 AT1G28210.2 38.554 83 47 1 12 94 48 126 8.95e-12 62.0
Msa0693730 AT1G24120.1 36.709 79 46 1 14 92 22 96 1.22e-11 62.0
Msa0693730 AT3G12170.1 32.026 153 77 6 12 146 11 154 1.39e-11 60.8
Msa0693730 AT3G12170.2 31.081 148 85 5 12 146 47 190 2.84e-11 60.5
Msa0693730 AT4G39960.1 45.455 66 31 1 13 78 86 146 3.11e-11 60.5
Msa0693730 AT4G39960.2 45.455 66 31 1 13 78 86 146 3.11e-11 60.5
Msa0693730 AT5G48030.1 45.455 66 32 1 13 78 95 156 3.16e-11 60.5
Msa0693730 AT4G10130.2 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0693730 AT4G10130.4 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0693730 AT4G10130.1 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0693730 AT4G10130.3 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0693730 AT4G10130.5 42.105 76 43 1 6 81 5 79 4.48e-11 58.5
Msa0693730 AT1G59980.2 37.975 79 45 1 14 92 25 99 4.70e-11 60.1
Msa0693730 AT1G59980.1 37.975 79 45 1 14 92 25 99 6.19e-11 59.7
Msa0693730 AT2G21510.3 45.588 68 33 1 11 78 5 68 6.91e-11 59.7
Msa0693730 AT2G21510.1 45.588 68 33 1 11 78 5 68 6.91e-11 59.7
Msa0693730 AT2G21510.5 45.588 68 33 1 11 78 5 68 7.27e-11 59.3
Msa0693730 AT2G21510.2 45.588 68 33 1 11 78 5 68 7.58e-11 59.3
Msa0693730 AT2G21510.4 45.588 68 33 1 11 78 5 68 7.58e-11 59.3

Find 49 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTGCAGGAGAAGGTTTA+TGG 0.240463 4_4:-62827925 Msa0693730:intron
AAGTTATGGTTGATATTTAT+TGG 0.248920 4_4:+62829882 None:intergenic
GGAGCTAAAGTCGGTTAATT+AGG 0.259989 4_4:+62829904 None:intergenic
GAACAAGGGAAATAAATTTA+TGG 0.265387 4_4:+62829859 None:intergenic
GGAGAAGGTTTATGGTTTAG+AGG 0.283100 4_4:-62827917 Msa0693730:CDS
ACCAAACTCAACAACTAAAA+AGG 0.283729 4_4:+62829736 None:intergenic
AACATTCAAGAAGCTTATTC+AGG 0.294312 4_4:-62829395 Msa0693730:intron
TCATCTTACTACAGTATTCT+TGG 0.298603 4_4:-62829644 Msa0693730:CDS
ATGAGATAAGGCGTGCTTAT+AGG 0.318628 4_4:-62829598 Msa0693730:CDS
AGTTATGGTTGATATTTATT+GGG 0.360632 4_4:+62829883 None:intergenic
AAATAAATTTATGGAAGTTA+TGG 0.370516 4_4:+62829868 None:intergenic
GGTGTTCTTGTCCACCTATC+TGG 0.379195 4_4:+62829452 None:intergenic
TTATGGTTTAGAGGAGTTGC+AGG 0.401445 4_4:-62827908 Msa0693730:CDS
CTCGCCTAACTTCAGCCATA+AGG 0.416208 4_4:+62829064 None:intergenic
CTGTAGTAAGATGACGATAA+TGG 0.435521 4_4:+62829653 None:intergenic
AAGGATTCATCAACCATAGA+TGG 0.439113 4_4:+62827829 None:intergenic
GGACGAAATGGTGTCCCTTA+TGG 0.441713 4_4:-62829079 Msa0693730:CDS
GGAGTTGCAGGACATGTTCA+TGG 0.460111 4_4:-62827896 Msa0693730:CDS
AGAGTCCTTCAATGTATTGT+GGG 0.465130 4_4:-62827855 Msa0693730:CDS
ATTCTTCATTAGATGAGATA+AGG 0.473305 4_4:-62829610 Msa0693730:CDS
TCGCCTAACTTCAGCCATAA+GGG 0.480132 4_4:+62829065 None:intergenic
ACCTCATCTTCTTCCTCTTG+AGG 0.492857 4_4:+62829225 None:intergenic
TGCTTATAGGAAGCTTGCTA+TGG 0.497498 4_4:-62829585 Msa0693730:intron
GAGAGTCCTTCAATGTATTG+TGG 0.499022 4_4:-62827856 Msa0693730:CDS
TGTCCCTTATGGCTGAAGTT+AGG 0.499106 4_4:-62829068 Msa0693730:CDS
AAAAGAACTATGTACGATGC+TGG 0.511823 4_4:-62829258 Msa0693730:CDS
GTATTGTGGGACACCATCTA+TGG 0.513118 4_4:-62827842 Msa0693730:CDS
CTAAAGTCGGTTAATTAGGA+AGG 0.521404 4_4:+62829908 None:intergenic
GCATAATTGACAAGGGAACA+AGG 0.526740 4_4:+62829844 None:intergenic
AATGTTCTGAAATTTACGCT+TGG 0.532819 4_4:+62829412 None:intergenic
TGCAGCAATGGCATCCAGAT+AGG 0.538770 4_4:-62829466 Msa0693730:intron
ACAATGGATGATTATAGTGA+AGG 0.543818 4_4:-62829677 Msa0693730:CDS
AACACTTCCTCTCTTAGCAA+AGG 0.546362 4_4:+62827810 None:intergenic
CAATGGATGATTATAGTGAA+GGG 0.570763 4_4:-62829676 Msa0693730:CDS
TATTTATTGGGAGCTAAAGT+CGG 0.576281 4_4:+62829895 None:intergenic
TTGGCTTCACTCAACAAAGA+AGG 0.576599 4_4:+62829431 None:intergenic
GGTGTCCCACAATACATTGA+AGG 0.581503 4_4:+62827850 None:intergenic
GCAGGACATGTTCATGGAGA+TGG 0.589641 4_4:-62827890 Msa0693730:CDS
ATGTTCATGGAGATGGCTGA+AGG 0.590061 4_4:-62827883 Msa0693730:CDS
TCCTCAAGAGGAAGAAGATG+AGG 0.607948 4_4:-62829226 Msa0693730:intron
GATGAATCCTTTGCTAAGAG+AGG 0.608489 4_4:-62827817 Msa0693730:CDS
GATTGCATGCATAATTGACA+AGG 0.611172 4_4:+62829836 None:intergenic
CATAATTGACAAGGGAACAA+GGG 0.613587 4_4:+62829845 None:intergenic
TAAAGTCGGTTAATTAGGAA+GGG 0.620321 4_4:+62829909 None:intergenic
ATGGTTTAAACGAGTTACAA+TGG 0.625435 4_4:-62829693 Msa0693730:exon
TGGCTTGTATGATCCTCAAG+AGG 0.660837 4_4:-62829238 Msa0693730:CDS
TATGGCTGAAGTTAGGCGAG+AGG 0.677695 4_4:-62829061 Msa0693730:intron
AGCAATGGCATCCAGATAGG+TGG 0.677774 4_4:-62829463 Msa0693730:CDS
ATTGCATGCATAATTGACAA+GGG 0.710105 4_4:+62829837 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTTATGGAAGTTA+TGG + chr4_4:62827850-62827869 None:intergenic 15.0%
!!! TTTTGTTTATTAGTTTGTTA+TGG - chr4_4:62828565-62828584 Msa0693730:intron 15.0%
!!! TCTATGAATTTTTAACATAA+AGG - chr4_4:62829704-62829723 Msa0693730:five_prime_UTR 15.0%
!! CAATAAGATATATACATATA+TGG + chr4_4:62829776-62829795 None:intergenic 15.0%
!! AAATAAATTTATGGAAGTTA+TGG + chr4_4:62827850-62827869 None:intergenic 15.0%
!!! TTTTGTTTATTAGTTTGTTA+TGG - chr4_4:62828565-62828584 Msa0693730:intron 15.0%
!!! TCTATGAATTTTTAACATAA+AGG - chr4_4:62829704-62829723 Msa0693730:five_prime_UTR 15.0%
!! CAATAAGATATATACATATA+TGG + chr4_4:62829776-62829795 None:intergenic 15.0%
!!! AGTTATGGTTGATATTTATT+GGG + chr4_4:62827835-62827854 None:intergenic 20.0%
!!! AAGTTATGGTTGATATTTAT+TGG + chr4_4:62827836-62827855 None:intergenic 20.0%
!!! TGTGAATTTTTGTATCATTT+TGG - chr4_4:62828363-62828382 Msa0693730:intron 20.0%
!!! AATTTTTGTATCATTTTGGT+GGG - chr4_4:62828367-62828386 Msa0693730:intron 20.0%
!!! ACATGTTTGTTTCTAATTTT+AGG - chr4_4:62828597-62828616 Msa0693730:intron 20.0%
!! AATGAATGTTGAAAATTTGA+AGG - chr4_4:62828906-62828925 Msa0693730:intron 20.0%
!! CATTTATCTTGTAAATGTAA+AGG + chr4_4:62829498-62829517 None:intergenic 20.0%
!! CTTTACATTTACAAGATAAA+TGG - chr4_4:62829496-62829515 Msa0693730:intron 20.0%
!!! TGATAGATATTTTTTACTGA+AGG - chr4_4:62829578-62829597 Msa0693730:intron 20.0%
!!! GATAGATATTTTTTACTGAA+GGG - chr4_4:62829579-62829598 Msa0693730:intron 20.0%
!! ATATGTATATATCTTATTGC+AGG - chr4_4:62829777-62829796 Msa0693730:five_prime_UTR 20.0%
!!! AGTTATGGTTGATATTTATT+GGG + chr4_4:62827835-62827854 None:intergenic 20.0%
!!! AAGTTATGGTTGATATTTAT+TGG + chr4_4:62827836-62827855 None:intergenic 20.0%
!!! TGTGAATTTTTGTATCATTT+TGG - chr4_4:62828363-62828382 Msa0693730:intron 20.0%
!!! AATTTTTGTATCATTTTGGT+GGG - chr4_4:62828367-62828386 Msa0693730:intron 20.0%
!!! ACATGTTTGTTTCTAATTTT+AGG - chr4_4:62828597-62828616 Msa0693730:intron 20.0%
!! AATGAATGTTGAAAATTTGA+AGG - chr4_4:62828906-62828925 Msa0693730:intron 20.0%
!! CATTTATCTTGTAAATGTAA+AGG + chr4_4:62829498-62829517 None:intergenic 20.0%
!! CTTTACATTTACAAGATAAA+TGG - chr4_4:62829496-62829515 Msa0693730:intron 20.0%
!!! TGATAGATATTTTTTACTGA+AGG - chr4_4:62829578-62829597 Msa0693730:intron 20.0%
!!! GATAGATATTTTTTACTGAA+GGG - chr4_4:62829579-62829598 Msa0693730:intron 20.0%
!! ATATGTATATATCTTATTGC+AGG - chr4_4:62829777-62829796 Msa0693730:five_prime_UTR 20.0%
! GAACAAGGGAAATAAATTTA+TGG + chr4_4:62827859-62827878 None:intergenic 25.0%
!! AAATGAGACAAGTATGTTTT+TGG + chr4_4:62827938-62827957 None:intergenic 25.0%
!!! CATATTTTATTTCTAGTGCA+TGG - chr4_4:62828003-62828022 Msa0693730:intron 25.0%
! ATTCTTCATTAGATGAGATA+AGG - chr4_4:62828105-62828124 Msa0693730:intron 25.0%
! CAATGCAAATGACAAAAAAA+GGG + chr4_4:62828172-62828191 None:intergenic 25.0%
! ACAATGCAAATGACAAAAAA+AGG + chr4_4:62828173-62828192 None:intergenic 25.0%
!! GAATTTTTGTATCATTTTGG+TGG - chr4_4:62828366-62828385 Msa0693730:intron 25.0%
!!! GTTTTCTGTTTTGTTTTGTT+TGG - chr4_4:62828412-62828431 Msa0693730:intron 25.0%
! ACAATCTTCAAGAAAAACTA+AGG + chr4_4:62828540-62828559 None:intergenic 25.0%
!! TTAGGATTTTTCTGATTTTG+TGG - chr4_4:62828615-62828634 Msa0693730:intron 25.0%
! TTAATGAGATTTCATGACTA+TGG - chr4_4:62828744-62828763 Msa0693730:intron 25.0%
! TAATGAGATTTCATGACTAT+GGG - chr4_4:62828745-62828764 Msa0693730:intron 25.0%
!! AATTCAAAATTTTGCACCTT+AGG + chr4_4:62828780-62828799 None:intergenic 25.0%
!!! TCTCTTTTTAGATTTGGTTT+GGG + chr4_4:62828822-62828841 None:intergenic 25.0%
!! ATTCACTCTCTTTTTAGATT+TGG + chr4_4:62828828-62828847 None:intergenic 25.0%
! AAAGATAGAGATAAAACACA+TGG - chr4_4:62828870-62828889 Msa0693730:intron 25.0%
!! GAAAAGATTAGTAACAGTTT+TGG - chr4_4:62828986-62829005 Msa0693730:intron 25.0%
!! GAAAAGATTAGTAACAGTTT+TGG - chr4_4:62828986-62829005 Msa0693730:intron 25.0%
!! TTTTGGATCAAATGAAGTTT+TGG - chr4_4:62829078-62829097 Msa0693730:CDS 25.0%
! AATCTTAGAATTAGAAATCG+TGG - chr4_4:62829124-62829143 Msa0693730:intron 25.0%
!!! TAAGCTAGTTTTGTTGAATT+GGG + chr4_4:62829160-62829179 None:intergenic 25.0%
!!! ATAAGCTAGTTTTGTTGAAT+TGG + chr4_4:62829161-62829180 None:intergenic 25.0%
! CTAACTCAATCTTACAAAAA+CGG - chr4_4:62829387-62829406 Msa0693730:intron 25.0%
!!! GGGTCTTTTTTTTTTTTTTG+TGG + chr4_4:62829644-62829663 None:intergenic 25.0%
! GAACAAGGGAAATAAATTTA+TGG + chr4_4:62827859-62827878 None:intergenic 25.0%
!! AAATGAGACAAGTATGTTTT+TGG + chr4_4:62827938-62827957 None:intergenic 25.0%
!!! CATATTTTATTTCTAGTGCA+TGG - chr4_4:62828003-62828022 Msa0693730:intron 25.0%
! ATTCTTCATTAGATGAGATA+AGG - chr4_4:62828105-62828124 Msa0693730:intron 25.0%
! CAATGCAAATGACAAAAAAA+GGG + chr4_4:62828172-62828191 None:intergenic 25.0%
! ACAATGCAAATGACAAAAAA+AGG + chr4_4:62828173-62828192 None:intergenic 25.0%
!! GAATTTTTGTATCATTTTGG+TGG - chr4_4:62828366-62828385 Msa0693730:intron 25.0%
!!! GTTTTCTGTTTTGTTTTGTT+TGG - chr4_4:62828412-62828431 Msa0693730:intron 25.0%
! ACAATCTTCAAGAAAAACTA+AGG + chr4_4:62828540-62828559 None:intergenic 25.0%
!! TTAGGATTTTTCTGATTTTG+TGG - chr4_4:62828615-62828634 Msa0693730:intron 25.0%
! TTAATGAGATTTCATGACTA+TGG - chr4_4:62828744-62828763 Msa0693730:intron 25.0%
! TAATGAGATTTCATGACTAT+GGG - chr4_4:62828745-62828764 Msa0693730:intron 25.0%
!! AATTCAAAATTTTGCACCTT+AGG + chr4_4:62828780-62828799 None:intergenic 25.0%
!!! TCTCTTTTTAGATTTGGTTT+GGG + chr4_4:62828822-62828841 None:intergenic 25.0%
!! ATTCACTCTCTTTTTAGATT+TGG + chr4_4:62828828-62828847 None:intergenic 25.0%
! AAAGATAGAGATAAAACACA+TGG - chr4_4:62828870-62828889 Msa0693730:intron 25.0%
!! GAAAAGATTAGTAACAGTTT+TGG - chr4_4:62828986-62829005 Msa0693730:intron 25.0%
!! GAAAAGATTAGTAACAGTTT+TGG - chr4_4:62828986-62829005 Msa0693730:intron 25.0%
!! TTTTGGATCAAATGAAGTTT+TGG - chr4_4:62829078-62829097 Msa0693730:CDS 25.0%
! AATCTTAGAATTAGAAATCG+TGG - chr4_4:62829124-62829143 Msa0693730:intron 25.0%
!!! TAAGCTAGTTTTGTTGAATT+GGG + chr4_4:62829160-62829179 None:intergenic 25.0%
!!! ATAAGCTAGTTTTGTTGAAT+TGG + chr4_4:62829161-62829180 None:intergenic 25.0%
! CTAACTCAATCTTACAAAAA+CGG - chr4_4:62829387-62829406 Msa0693730:intron 25.0%
!!! GGGTCTTTTTTTTTTTTTTG+TGG + chr4_4:62829644-62829663 None:intergenic 25.0%
TAAAGTCGGTTAATTAGGAA+GGG + chr4_4:62827809-62827828 None:intergenic 30.0%
TATTTATTGGGAGCTAAAGT+CGG + chr4_4:62827823-62827842 None:intergenic 30.0%
ATTGCATGCATAATTGACAA+GGG + chr4_4:62827881-62827900 None:intergenic 30.0%
CAACAACTAAAAAGGAATCA+AGG + chr4_4:62827974-62827993 None:intergenic 30.0%
!!! TCCTTTTTAGTTGTTGAGTT+TGG - chr4_4:62827978-62827997 Msa0693730:intron 30.0%
ACCAAACTCAACAACTAAAA+AGG + chr4_4:62827982-62828001 None:intergenic 30.0%
ATGGTTTAAACGAGTTACAA+TGG - chr4_4:62828022-62828041 Msa0693730:intron 30.0%
ACAATGGATGATTATAGTGA+AGG - chr4_4:62828038-62828057 Msa0693730:intron 30.0%
CAATGGATGATTATAGTGAA+GGG - chr4_4:62828039-62828058 Msa0693730:intron 30.0%
TCATCTTACTACAGTATTCT+TGG - chr4_4:62828071-62828090 Msa0693730:intron 30.0%
!! TGAATTTTGATCTGAATGTG+AGG - chr4_4:62828203-62828222 Msa0693730:intron 30.0%
!! AATGTTCTGAAATTTACGCT+TGG + chr4_4:62828306-62828325 None:intergenic 30.0%
AACATTCAAGAAGCTTATTC+AGG - chr4_4:62828320-62828339 Msa0693730:intron 30.0%
! TCGTACATAGTTCTTTTCTT+GGG + chr4_4:62828454-62828473 None:intergenic 30.0%
! ATCGTACATAGTTCTTTTCT+TGG + chr4_4:62828455-62828474 None:intergenic 30.0%
! CAAGATCAAACTTTTCTAAC+AGG + chr4_4:62828701-62828720 None:intergenic 30.0%
CTGTTAGAAAAGTTTGATCT+TGG - chr4_4:62828699-62828718 Msa0693730:intron 30.0%
!! CTCTCTTTTTAGATTTGGTT+TGG + chr4_4:62828823-62828842 None:intergenic 30.0%
GTTCATTTAAATTGTACCGA+AGG - chr4_4:62828944-62828963 Msa0693730:intron 30.0%
!!! ACAGTTTTGGATCAAATGAT+TGG - chr4_4:62828999-62829018 Msa0693730:intron 30.0%
TGATTGGATCAAACATTGTA+CGG - chr4_4:62829015-62829034 Msa0693730:intron 30.0%
TTAGAATTAGAAATCGTGGT+TGG - chr4_4:62829128-62829147 Msa0693730:intron 30.0%
! TTCAACAAAACTAGCTTATG+AGG - chr4_4:62829162-62829181 Msa0693730:intron 30.0%
TGATATCATCTTAGAAATCG+TGG - chr4_4:62829358-62829377 Msa0693730:intron 30.0%
! CGTTTTTGTAAGATTGAGTT+AGG + chr4_4:62829389-62829408 None:intergenic 30.0%
TTAAAAGTCTCACATCAGAT+AGG + chr4_4:62829462-62829481 None:intergenic 30.0%
TAAGAATGTCTTTGTGACAT+GGG + chr4_4:62829664-62829683 None:intergenic 30.0%
ATGTCACAAAGACATTCTTA+GGG - chr4_4:62829664-62829683 Msa0693730:CDS 30.0%
ATATATCTTATTGCAGGAGA+AGG - chr4_4:62829783-62829802 Msa0693730:five_prime_UTR 30.0%
TAAAGTCGGTTAATTAGGAA+GGG + chr4_4:62827809-62827828 None:intergenic 30.0%
TATTTATTGGGAGCTAAAGT+CGG + chr4_4:62827823-62827842 None:intergenic 30.0%
ATTGCATGCATAATTGACAA+GGG + chr4_4:62827881-62827900 None:intergenic 30.0%
CAACAACTAAAAAGGAATCA+AGG + chr4_4:62827974-62827993 None:intergenic 30.0%
!!! TCCTTTTTAGTTGTTGAGTT+TGG - chr4_4:62827978-62827997 Msa0693730:intron 30.0%
ACCAAACTCAACAACTAAAA+AGG + chr4_4:62827982-62828001 None:intergenic 30.0%
ATGGTTTAAACGAGTTACAA+TGG - chr4_4:62828022-62828041 Msa0693730:intron 30.0%
ACAATGGATGATTATAGTGA+AGG - chr4_4:62828038-62828057 Msa0693730:intron 30.0%
CAATGGATGATTATAGTGAA+GGG - chr4_4:62828039-62828058 Msa0693730:intron 30.0%
TCATCTTACTACAGTATTCT+TGG - chr4_4:62828071-62828090 Msa0693730:intron 30.0%
!! TGAATTTTGATCTGAATGTG+AGG - chr4_4:62828203-62828222 Msa0693730:intron 30.0%
!! AATGTTCTGAAATTTACGCT+TGG + chr4_4:62828306-62828325 None:intergenic 30.0%
AACATTCAAGAAGCTTATTC+AGG - chr4_4:62828320-62828339 Msa0693730:intron 30.0%
! TCGTACATAGTTCTTTTCTT+GGG + chr4_4:62828454-62828473 None:intergenic 30.0%
! ATCGTACATAGTTCTTTTCT+TGG + chr4_4:62828455-62828474 None:intergenic 30.0%
! CAAGATCAAACTTTTCTAAC+AGG + chr4_4:62828701-62828720 None:intergenic 30.0%
CTGTTAGAAAAGTTTGATCT+TGG - chr4_4:62828699-62828718 Msa0693730:intron 30.0%
!! CTCTCTTTTTAGATTTGGTT+TGG + chr4_4:62828823-62828842 None:intergenic 30.0%
GTTCATTTAAATTGTACCGA+AGG - chr4_4:62828944-62828963 Msa0693730:intron 30.0%
!!! ACAGTTTTGGATCAAATGAT+TGG - chr4_4:62828999-62829018 Msa0693730:intron 30.0%
TGATTGGATCAAACATTGTA+CGG - chr4_4:62829015-62829034 Msa0693730:intron 30.0%
TTAGAATTAGAAATCGTGGT+TGG - chr4_4:62829128-62829147 Msa0693730:intron 30.0%
! TTCAACAAAACTAGCTTATG+AGG - chr4_4:62829162-62829181 Msa0693730:intron 30.0%
TGATATCATCTTAGAAATCG+TGG - chr4_4:62829358-62829377 Msa0693730:intron 30.0%
! CGTTTTTGTAAGATTGAGTT+AGG + chr4_4:62829389-62829408 None:intergenic 30.0%
TTAAAAGTCTCACATCAGAT+AGG + chr4_4:62829462-62829481 None:intergenic 30.0%
TAAGAATGTCTTTGTGACAT+GGG + chr4_4:62829664-62829683 None:intergenic 30.0%
ATGTCACAAAGACATTCTTA+GGG - chr4_4:62829664-62829683 Msa0693730:CDS 30.0%
ATATATCTTATTGCAGGAGA+AGG - chr4_4:62829783-62829802 Msa0693730:five_prime_UTR 30.0%
CTAAAGTCGGTTAATTAGGA+AGG + chr4_4:62827810-62827829 None:intergenic 35.0%
CATAATTGACAAGGGAACAA+GGG + chr4_4:62827873-62827892 None:intergenic 35.0%
GATTGCATGCATAATTGACA+AGG + chr4_4:62827882-62827901 None:intergenic 35.0%
CTGTAGTAAGATGACGATAA+TGG + chr4_4:62828065-62828084 None:intergenic 35.0%
AATTTCAATGCATGCAGCAA+TGG - chr4_4:62828237-62828256 Msa0693730:intron 35.0%
AAAAGAACTATGTACGATGC+TGG - chr4_4:62828457-62828476 Msa0693730:intron 35.0%
! TTCTGATTTTGTGGACGAAA+TGG - chr4_4:62828624-62828643 Msa0693730:intron 35.0%
! CAAACTTTTCTAACAGGAAG+TGG + chr4_4:62828695-62828714 None:intergenic 35.0%
CTATGGGTACTTATATCCTA+AGG - chr4_4:62828761-62828780 Msa0693730:intron 35.0%
CTTTACTGAGTTGTTACCTT+CGG + chr4_4:62828963-62828982 None:intergenic 35.0%
GAAGGTAACAACTCAGTAAA+GGG - chr4_4:62828962-62828981 Msa0693730:intron 35.0%
GAAGGTAACAACTCAGTAAA+GGG - chr4_4:62828962-62828981 Msa0693730:intron 35.0%
GGATCAAATGAATGAGTAGA+TGG - chr4_4:62829099-62829118 Msa0693730:CDS 35.0%
! AACAAAACTAGCTTATGAGG+TGG - chr4_4:62829165-62829184 Msa0693730:intron 35.0%
! ACAAAACTAGCTTATGAGGT+GGG - chr4_4:62829166-62829185 Msa0693730:intron 35.0%
AGCGAAAACTTAATAGCAGA+TGG - chr4_4:62829311-62829330 Msa0693730:intron 35.0%
CTTAATAGCAGATGGTCTAA+CGG - chr4_4:62829319-62829338 Msa0693730:intron 35.0%
ATCATCTTAGAAATCGTGGT+TGG - chr4_4:62829362-62829381 Msa0693730:intron 35.0%
TCATCTTAGAAATCGTGGTT+GGG - chr4_4:62829363-62829382 Msa0693730:intron 35.0%
AAACTGTGCTGCAAGTTTAA+AGG + chr4_4:62829543-62829562 None:intergenic 35.0%
CTAAGAATGTCTTTGTGACA+TGG + chr4_4:62829665-62829684 None:intergenic 35.0%
CATGTCACAAAGACATTCTT+AGG - chr4_4:62829663-62829682 Msa0693730:CDS 35.0%
TGTCACAAAGACATTCTTAG+GGG - chr4_4:62829665-62829684 Msa0693730:CDS 35.0%
AAAGACATTCTTAGGGGTTT+AGG - chr4_4:62829671-62829690 Msa0693730:CDS 35.0%
TTATTGCAGGAGAAGGTTTA+TGG - chr4_4:62829790-62829809 Msa0693730:five_prime_UTR 35.0%
AGAGTCCTTCAATGTATTGT+GGG - chr4_4:62829860-62829879 Msa0693730:five_prime_UTR 35.0%
AAGGATTCATCAACCATAGA+TGG + chr4_4:62829889-62829908 None:intergenic 35.0%
CTAAAGTCGGTTAATTAGGA+AGG + chr4_4:62827810-62827829 None:intergenic 35.0%
CATAATTGACAAGGGAACAA+GGG + chr4_4:62827873-62827892 None:intergenic 35.0%
GATTGCATGCATAATTGACA+AGG + chr4_4:62827882-62827901 None:intergenic 35.0%
CTGTAGTAAGATGACGATAA+TGG + chr4_4:62828065-62828084 None:intergenic 35.0%
AATTTCAATGCATGCAGCAA+TGG - chr4_4:62828237-62828256 Msa0693730:intron 35.0%
AAAAGAACTATGTACGATGC+TGG - chr4_4:62828457-62828476 Msa0693730:intron 35.0%
! TTCTGATTTTGTGGACGAAA+TGG - chr4_4:62828624-62828643 Msa0693730:intron 35.0%
! CAAACTTTTCTAACAGGAAG+TGG + chr4_4:62828695-62828714 None:intergenic 35.0%
CTATGGGTACTTATATCCTA+AGG - chr4_4:62828761-62828780 Msa0693730:intron 35.0%
CTTTACTGAGTTGTTACCTT+CGG + chr4_4:62828963-62828982 None:intergenic 35.0%
GAAGGTAACAACTCAGTAAA+GGG - chr4_4:62828962-62828981 Msa0693730:intron 35.0%
GAAGGTAACAACTCAGTAAA+GGG - chr4_4:62828962-62828981 Msa0693730:intron 35.0%
GGATCAAATGAATGAGTAGA+TGG - chr4_4:62829099-62829118 Msa0693730:CDS 35.0%
! AACAAAACTAGCTTATGAGG+TGG - chr4_4:62829165-62829184 Msa0693730:intron 35.0%
! ACAAAACTAGCTTATGAGGT+GGG - chr4_4:62829166-62829185 Msa0693730:intron 35.0%
AGCGAAAACTTAATAGCAGA+TGG - chr4_4:62829311-62829330 Msa0693730:intron 35.0%
CTTAATAGCAGATGGTCTAA+CGG - chr4_4:62829319-62829338 Msa0693730:intron 35.0%
ATCATCTTAGAAATCGTGGT+TGG - chr4_4:62829362-62829381 Msa0693730:intron 35.0%
TCATCTTAGAAATCGTGGTT+GGG - chr4_4:62829363-62829382 Msa0693730:intron 35.0%
AAACTGTGCTGCAAGTTTAA+AGG + chr4_4:62829543-62829562 None:intergenic 35.0%
CTAAGAATGTCTTTGTGACA+TGG + chr4_4:62829665-62829684 None:intergenic 35.0%
CATGTCACAAAGACATTCTT+AGG - chr4_4:62829663-62829682 Msa0693730:CDS 35.0%
TGTCACAAAGACATTCTTAG+GGG - chr4_4:62829665-62829684 Msa0693730:CDS 35.0%
AAAGACATTCTTAGGGGTTT+AGG - chr4_4:62829671-62829690 Msa0693730:CDS 35.0%
TTATTGCAGGAGAAGGTTTA+TGG - chr4_4:62829790-62829809 Msa0693730:five_prime_UTR 35.0%
AGAGTCCTTCAATGTATTGT+GGG - chr4_4:62829860-62829879 Msa0693730:five_prime_UTR 35.0%
AAGGATTCATCAACCATAGA+TGG + chr4_4:62829889-62829908 None:intergenic 35.0%
GGAGCTAAAGTCGGTTAATT+AGG + chr4_4:62827814-62827833 None:intergenic 40.0%
GCATAATTGACAAGGGAACA+AGG + chr4_4:62827874-62827893 None:intergenic 40.0%
ATGAGATAAGGCGTGCTTAT+AGG - chr4_4:62828117-62828136 Msa0693730:intron 40.0%
!! TGCTTATAGGAAGCTTGCTA+TGG - chr4_4:62828130-62828149 Msa0693730:intron 40.0%
TTGGCTTCACTCAACAAAGA+AGG + chr4_4:62828287-62828306 None:intergenic 40.0%
CGAAGGTAACAACTCAGTAA+AGG - chr4_4:62828961-62828980 Msa0693730:intron 40.0%
TGGATCAAACATTGTACGGA+AGG - chr4_4:62829019-62829038 Msa0693730:intron 40.0%
GGAAGGTAACAACTCAGTAA+AGG - chr4_4:62829036-62829055 Msa0693730:intron 40.0%
! CAAAACTAGCTTATGAGGTG+GGG - chr4_4:62829167-62829186 Msa0693730:intron 40.0%
AGACTATCTCCTATTCGATG+TGG - chr4_4:62829217-62829236 Msa0693730:intron 40.0%
GACTATCTCCTATTCGATGT+GGG - chr4_4:62829218-62829237 Msa0693730:intron 40.0%
TAAAGAGTCCCACATCGAAT+AGG + chr4_4:62829229-62829248 None:intergenic 40.0%
ATATGGGGCATGGACATAAT+TGG - chr4_4:62829275-62829294 Msa0693730:CDS 40.0%
GGAGAAGGTTTATGGTTTAG+AGG - chr4_4:62829798-62829817 Msa0693730:five_prime_UTR 40.0%
TTATGGTTTAGAGGAGTTGC+AGG - chr4_4:62829807-62829826 Msa0693730:five_prime_UTR 40.0%
GAGAGTCCTTCAATGTATTG+TGG - chr4_4:62829859-62829878 Msa0693730:five_prime_UTR 40.0%
GATGAATCCTTTGCTAAGAG+AGG - chr4_4:62829898-62829917 Msa0693730:five_prime_UTR 40.0%
AACACTTCCTCTCTTAGCAA+AGG + chr4_4:62829908-62829927 None:intergenic 40.0%
GGAGCTAAAGTCGGTTAATT+AGG + chr4_4:62827814-62827833 None:intergenic 40.0%
GCATAATTGACAAGGGAACA+AGG + chr4_4:62827874-62827893 None:intergenic 40.0%
ATGAGATAAGGCGTGCTTAT+AGG - chr4_4:62828117-62828136 Msa0693730:intron 40.0%
!! TGCTTATAGGAAGCTTGCTA+TGG - chr4_4:62828130-62828149 Msa0693730:intron 40.0%
TTGGCTTCACTCAACAAAGA+AGG + chr4_4:62828287-62828306 None:intergenic 40.0%
CGAAGGTAACAACTCAGTAA+AGG - chr4_4:62828961-62828980 Msa0693730:intron 40.0%
TGGATCAAACATTGTACGGA+AGG - chr4_4:62829019-62829038 Msa0693730:intron 40.0%
GGAAGGTAACAACTCAGTAA+AGG - chr4_4:62829036-62829055 Msa0693730:intron 40.0%
! CAAAACTAGCTTATGAGGTG+GGG - chr4_4:62829167-62829186 Msa0693730:intron 40.0%
AGACTATCTCCTATTCGATG+TGG - chr4_4:62829217-62829236 Msa0693730:intron 40.0%
GACTATCTCCTATTCGATGT+GGG - chr4_4:62829218-62829237 Msa0693730:intron 40.0%
TAAAGAGTCCCACATCGAAT+AGG + chr4_4:62829229-62829248 None:intergenic 40.0%
ATATGGGGCATGGACATAAT+TGG - chr4_4:62829275-62829294 Msa0693730:CDS 40.0%
GGAGAAGGTTTATGGTTTAG+AGG - chr4_4:62829798-62829817 Msa0693730:five_prime_UTR 40.0%
TTATGGTTTAGAGGAGTTGC+AGG - chr4_4:62829807-62829826 Msa0693730:five_prime_UTR 40.0%
GAGAGTCCTTCAATGTATTG+TGG - chr4_4:62829859-62829878 Msa0693730:five_prime_UTR 40.0%
GATGAATCCTTTGCTAAGAG+AGG - chr4_4:62829898-62829917 Msa0693730:five_prime_UTR 40.0%
AACACTTCCTCTCTTAGCAA+AGG + chr4_4:62829908-62829927 None:intergenic 40.0%
! TGGCTTGTATGATCCTCAAG+AGG - chr4_4:62828477-62828496 Msa0693730:intron 45.0%
TCCTCAAGAGGAAGAAGATG+AGG - chr4_4:62828489-62828508 Msa0693730:intron 45.0%
ACCTCATCTTCTTCCTCTTG+AGG + chr4_4:62828493-62828512 None:intergenic 45.0%
TGTCCCTTATGGCTGAAGTT+AGG - chr4_4:62828647-62828666 Msa0693730:intron 45.0%
TCGCCTAACTTCAGCCATAA+GGG + chr4_4:62828653-62828672 None:intergenic 45.0%
! GATGGTCTAACGGATCTTAG+AGG - chr4_4:62829329-62829348 Msa0693730:intron 45.0%
CAAAAACGGTTTGTGAGACG+AGG - chr4_4:62829401-62829420 Msa0693730:CDS 45.0%
ATGTTCATGGAGATGGCTGA+AGG - chr4_4:62829832-62829851 Msa0693730:five_prime_UTR 45.0%
GGTGTCCCACAATACATTGA+AGG + chr4_4:62829868-62829887 None:intergenic 45.0%
GTATTGTGGGACACCATCTA+TGG - chr4_4:62829873-62829892 Msa0693730:five_prime_UTR 45.0%
! TGGCTTGTATGATCCTCAAG+AGG - chr4_4:62828477-62828496 Msa0693730:intron 45.0%
TCCTCAAGAGGAAGAAGATG+AGG - chr4_4:62828489-62828508 Msa0693730:intron 45.0%
ACCTCATCTTCTTCCTCTTG+AGG + chr4_4:62828493-62828512 None:intergenic 45.0%
TGTCCCTTATGGCTGAAGTT+AGG - chr4_4:62828647-62828666 Msa0693730:intron 45.0%
TCGCCTAACTTCAGCCATAA+GGG + chr4_4:62828653-62828672 None:intergenic 45.0%
! GATGGTCTAACGGATCTTAG+AGG - chr4_4:62829329-62829348 Msa0693730:intron 45.0%
CAAAAACGGTTTGTGAGACG+AGG - chr4_4:62829401-62829420 Msa0693730:CDS 45.0%
ATGTTCATGGAGATGGCTGA+AGG - chr4_4:62829832-62829851 Msa0693730:five_prime_UTR 45.0%
GGTGTCCCACAATACATTGA+AGG + chr4_4:62829868-62829887 None:intergenic 45.0%
GTATTGTGGGACACCATCTA+TGG - chr4_4:62829873-62829892 Msa0693730:five_prime_UTR 45.0%
TGCAGCAATGGCATCCAGAT+AGG - chr4_4:62828249-62828268 Msa0693730:intron 50.0%
AGCAATGGCATCCAGATAGG+TGG - chr4_4:62828252-62828271 Msa0693730:intron 50.0%
GGTGTTCTTGTCCACCTATC+TGG + chr4_4:62828266-62828285 None:intergenic 50.0%
GGACGAAATGGTGTCCCTTA+TGG - chr4_4:62828636-62828655 Msa0693730:intron 50.0%
CTCGCCTAACTTCAGCCATA+AGG + chr4_4:62828654-62828673 None:intergenic 50.0%
TATGGCTGAAGTTAGGCGAG+AGG - chr4_4:62828654-62828673 Msa0693730:intron 50.0%
ATGTCTAGTCCTGGACGCAA+GGG + chr4_4:62829257-62829276 None:intergenic 50.0%
TATGTCTAGTCCTGGACGCA+AGG + chr4_4:62829258-62829277 None:intergenic 50.0%
TGCGTCCAGGACTAGACATA+TGG - chr4_4:62829258-62829277 Msa0693730:CDS 50.0%
GCGTCCAGGACTAGACATAT+GGG - chr4_4:62829259-62829278 Msa0693730:CDS 50.0%
CGTCCAGGACTAGACATATG+GGG - chr4_4:62829260-62829279 Msa0693730:CDS 50.0%
ATGCCCCATATGTCTAGTCC+TGG + chr4_4:62829266-62829285 None:intergenic 50.0%
AGGACTAGACATATGGGGCA+TGG - chr4_4:62829265-62829284 Msa0693730:CDS 50.0%
TGGGGCATGGACATAATTGG+TGG - chr4_4:62829278-62829297 Msa0693730:CDS 50.0%
GGGGCATGGACATAATTGGT+GGG - chr4_4:62829279-62829298 Msa0693730:intron 50.0%
GCATGGACATAATTGGTGGG+TGG - chr4_4:62829282-62829301 Msa0693730:intron 50.0%
GGAGTTGCAGGACATGTTCA+TGG - chr4_4:62829819-62829838 Msa0693730:five_prime_UTR 50.0%
GCAGGACATGTTCATGGAGA+TGG - chr4_4:62829825-62829844 Msa0693730:five_prime_UTR 50.0%
TGCAGCAATGGCATCCAGAT+AGG - chr4_4:62828249-62828268 Msa0693730:intron 50.0%
AGCAATGGCATCCAGATAGG+TGG - chr4_4:62828252-62828271 Msa0693730:intron 50.0%
GGTGTTCTTGTCCACCTATC+TGG + chr4_4:62828266-62828285 None:intergenic 50.0%
GGACGAAATGGTGTCCCTTA+TGG - chr4_4:62828636-62828655 Msa0693730:intron 50.0%
CTCGCCTAACTTCAGCCATA+AGG + chr4_4:62828654-62828673 None:intergenic 50.0%
TATGGCTGAAGTTAGGCGAG+AGG - chr4_4:62828654-62828673 Msa0693730:intron 50.0%
ATGTCTAGTCCTGGACGCAA+GGG + chr4_4:62829257-62829276 None:intergenic 50.0%
TATGTCTAGTCCTGGACGCA+AGG + chr4_4:62829258-62829277 None:intergenic 50.0%
TGCGTCCAGGACTAGACATA+TGG - chr4_4:62829258-62829277 Msa0693730:CDS 50.0%
GCGTCCAGGACTAGACATAT+GGG - chr4_4:62829259-62829278 Msa0693730:CDS 50.0%
CGTCCAGGACTAGACATATG+GGG - chr4_4:62829260-62829279 Msa0693730:CDS 50.0%
ATGCCCCATATGTCTAGTCC+TGG + chr4_4:62829266-62829285 None:intergenic 50.0%
AGGACTAGACATATGGGGCA+TGG - chr4_4:62829265-62829284 Msa0693730:CDS 50.0%
TGGGGCATGGACATAATTGG+TGG - chr4_4:62829278-62829297 Msa0693730:CDS 50.0%
GGGGCATGGACATAATTGGT+GGG - chr4_4:62829279-62829298 Msa0693730:intron 50.0%
GCATGGACATAATTGGTGGG+TGG - chr4_4:62829282-62829301 Msa0693730:intron 50.0%
GGAGTTGCAGGACATGTTCA+TGG - chr4_4:62829819-62829838 Msa0693730:five_prime_UTR 50.0%
GCAGGACATGTTCATGGAGA+TGG - chr4_4:62829825-62829844 Msa0693730:five_prime_UTR 50.0%
TTTAACACCCCCTTGCGTCC+AGG - chr4_4:62829245-62829264 Msa0693730:CDS 55.0%
TGTCTAGTCCTGGACGCAAG+GGG + chr4_4:62829256-62829275 None:intergenic 55.0%
TTTAACACCCCCTTGCGTCC+AGG - chr4_4:62829245-62829264 Msa0693730:CDS 55.0%
TGTCTAGTCCTGGACGCAAG+GGG + chr4_4:62829256-62829275 None:intergenic 55.0%
GTCTAGTCCTGGACGCAAGG+GGG + chr4_4:62829255-62829274 None:intergenic 60.0%
GTCTAGTCCTGGACGCAAGG+GGG + chr4_4:62829255-62829274 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 62827798 62829939 62827798 ID=Msa0693730;Name=Msa0693730
chr4_4 mRNA 62827798 62829939 62827798 ID=Msa0693730-mRNA-1;Parent=Msa0693730;Name=Msa0693730-mRNA-1;_AED=0.15;_eAED=0.15;_QI=243|1|0.8|1|1|1|5|0|155
chr4_4 exon 62827798 62827938 62827798 ID=Msa0693730-mRNA-1:exon:17641;Parent=Msa0693730-mRNA-1
chr4_4 exon 62829062 62829118 62829062 ID=Msa0693730-mRNA-1:exon:17640;Parent=Msa0693730-mRNA-1
chr4_4 exon 62829227 62829297 62829227 ID=Msa0693730-mRNA-1:exon:17639;Parent=Msa0693730-mRNA-1
chr4_4 exon 62829396 62829483 62829396 ID=Msa0693730-mRNA-1:exon:17638;Parent=Msa0693730-mRNA-1
chr4_4 exon 62829586 62829939 62829586 ID=Msa0693730-mRNA-1:exon:17637;Parent=Msa0693730-mRNA-1
chr4_4 five_prime_UTR 62829697 62829939 62829697 ID=Msa0693730-mRNA-1:five_prime_utr;Parent=Msa0693730-mRNA-1
chr4_4 CDS 62829586 62829696 62829586 ID=Msa0693730-mRNA-1:cds;Parent=Msa0693730-mRNA-1
chr4_4 CDS 62829396 62829483 62829396 ID=Msa0693730-mRNA-1:cds;Parent=Msa0693730-mRNA-1
chr4_4 CDS 62829227 62829297 62829227 ID=Msa0693730-mRNA-1:cds;Parent=Msa0693730-mRNA-1
chr4_4 CDS 62829062 62829118 62829062 ID=Msa0693730-mRNA-1:cds;Parent=Msa0693730-mRNA-1
chr4_4 CDS 62827798 62827938 62827798 ID=Msa0693730-mRNA-1:cds;Parent=Msa0693730-mRNA-1
Gene Sequence

>Msa0693730

ATGGATGATTATAGTGAAGGGCCATTATCGTCATCTTACTACAGTATTCTTGGTGTTAGTTCTGATTCTTCATTAGATGAGATAAGGCGTGCTTATAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACAAGAACACCTTCTTTGTTGAGTGAAGCCAAGCGTAAATTTCAGAACATTCAAGAAGCTTATTCAGTGCTATCTGATCCCAAGAAAAGAACTATGTACGATGCTGGCTTGTATGATCCTCAAGAGGAAGAAGATGAGGATTTTTCTGATTTTGTGGACGAAATGGTGTCCCTTATGGCTGAAGTTAGGCGAGAGGAGAAGGTTTATGGTTTAGAGGAGTTGCAGGACATGTTCATGGAGATGGCTGAAGGATTTGAGAGTCCTTCAATGTATTGTGGGACACCATCTATGGTTGATGAATCCTTTGCTAAGAGAGGAAGTGTTTTGACACGATAA
Protein sequence

>Msa0693730

MDDYSEGPLSSSYYSILGVSSDSSLDEIRRAYRKLAMQWHPDRWTRTPSLLSEAKRKFQNIQEAYSVLSDPKKRTMYDAGLYDPQEEEDEDFSDFVDEMVSLMAEVRREEKVYGLEELQDMFMEMAEGFESPSMYCGTPSMVDESFAKRGSVLTR*