Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269290 | XP_024638454.1 | 99.601 | 501 | 2 | 0 | 1 | 501 | 1 | 501 | 0.0 | 1029 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269290 | sp|P54567|YQKD_BACSU | 28.631 | 241 | 147 | 8 | 36 | 266 | 56 | 281 | 2.36e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269290 | A0A072V3H8 | 99.402 | 502 | 2 | 1 | 1 | 501 | 1 | 502 | 0.0 | 1024 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0269290 | Msa0792100 | 0.978870 | 9.717736e-147 | -8.615850e-47 |
| Msa0269290 | Msa1172220 | 0.937188 | 5.193490e-98 | -8.615850e-47 |
| Msa0269290 | Msa1267270 | 0.909689 | 4.311792e-82 | -8.615850e-47 |
| Msa0269290 | Msa1441180 | 0.834391 | 3.078903e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269290 | MtrunA17_Chr4g0076631 | 99.402 | 502 | 2 | 1 | 1 | 501 | 1 | 502 | 0.0 | 1024 |
| Msa0269290 | MtrunA17_Chr2g0291031 | 68.263 | 501 | 119 | 5 | 1 | 501 | 1 | 461 | 0.0 | 638 |
| Msa0269290 | MtrunA17_Chr4g0065941 | 68.792 | 298 | 90 | 1 | 2 | 299 | 1 | 295 | 3.50e-154 | 442 |
| Msa0269290 | MtrunA17_Chr2g0287221 | 62.179 | 312 | 115 | 1 | 2 | 313 | 1 | 309 | 6.23e-146 | 429 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269290 | AT4G17150.1 | 64.522 | 513 | 148 | 5 | 1 | 500 | 10 | 501 | 0.0 | 626 |
| Msa0269290 | AT4G17150.4 | 71.182 | 406 | 106 | 4 | 1 | 398 | 10 | 412 | 0.0 | 558 |
| Msa0269290 | AT4G17150.5 | 63.002 | 473 | 141 | 5 | 41 | 500 | 26 | 477 | 0.0 | 555 |
| Msa0269290 | AT4G17150.3 | 76.796 | 362 | 82 | 1 | 1 | 360 | 10 | 371 | 0.0 | 549 |
| Msa0269290 | AT4G17150.2 | 76.796 | 362 | 82 | 1 | 1 | 360 | 10 | 371 | 0.0 | 549 |
| Msa0269290 | AT4G14290.2 | 71.429 | 287 | 82 | 0 | 2 | 288 | 1 | 287 | 5.96e-158 | 459 |
| Msa0269290 | AT4G14290.1 | 71.429 | 287 | 82 | 0 | 2 | 288 | 1 | 287 | 8.94e-158 | 460 |
| Msa0269290 | AT3G23540.1 | 67.657 | 303 | 95 | 1 | 2 | 301 | 1 | 303 | 1.30e-155 | 455 |
| Msa0269290 | AT3G23540.3 | 69.091 | 275 | 82 | 1 | 30 | 301 | 2 | 276 | 1.66e-141 | 418 |
| Msa0269290 | AT4G14290.5 | 72.532 | 233 | 64 | 0 | 56 | 288 | 1 | 233 | 2.23e-127 | 380 |
| Msa0269290 | AT3G23540.2 | 67.500 | 160 | 49 | 1 | 145 | 301 | 1 | 160 | 3.40e-73 | 238 |
| Msa0269290 | AT4G14290.3 | 70.714 | 140 | 41 | 0 | 149 | 288 | 33 | 172 | 1.14e-67 | 224 |
| Msa0269290 | AT4G14290.4 | 70.803 | 137 | 40 | 0 | 152 | 288 | 1 | 137 | 3.82e-67 | 222 |
Find 150 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGAGGTGTTTGGTGTTCT+TGG | 0.142159 | 2_3:-56246 | Msa0269290:five_prime_UTR |
| GTGGGATTTAGCCTTCTTTA+TGG | 0.167652 | 2_3:-53353 | Msa0269290:intron |
| CTCGAGAAATATTATGATTT+AGG | 0.172301 | 2_3:-51654 | Msa0269290:CDS |
| AAATATCCCGTATAGGTTTA+TGG | 0.173583 | 2_3:-53975 | Msa0269290:CDS |
| TTTAGGAATTGCCAAATATT+TGG | 0.181328 | 2_3:-48077 | Msa0269290:three_prime_UTR |
| TTCTCCCAATTAGGTTAAAA+TGG | 0.185844 | 2_3:-52269 | Msa0269290:intron |
| ATACTTCTTCTCAGCTTATT+TGG | 0.201453 | 2_3:-56136 | Msa0269290:five_prime_UTR |
| TTGCTAACAAGCCAAATATT+TGG | 0.214997 | 2_3:+48066 | None:intergenic |
| CTTGCGGCTTTGTCTTCTTA+AGG | 0.270780 | 2_3:-48332 | Msa0269290:CDS |
| GCCAATCAGAAACCAATATT+TGG | 0.276128 | 2_3:+48147 | None:intergenic |
| TTCTCAAATCTGTCACTCTT+TGG | 0.286897 | 2_3:+48376 | None:intergenic |
| TGCACACTTGCGGCTTCATC+AGG | 0.294214 | 2_3:+50636 | None:intergenic |
| TCGAGAAATATTATGATTTA+GGG | 0.306533 | 2_3:-51653 | Msa0269290:CDS |
| GAGGACATTGTAGAAGAAAA+TGG | 0.307349 | 2_3:+51707 | None:intergenic |
| AGTTGTGAAGAAAGAGAGAT+TGG | 0.326983 | 2_3:-55735 | Msa0269290:five_prime_UTR |
| TGGGGCAGGTGTTCTTCATT+AGG | 0.330333 | 2_3:-49534 | Msa0269290:CDS |
| TTCTATTGCTGGAATGGTAT+TGG | 0.336375 | 2_3:-53318 | Msa0269290:CDS |
| TTGCGGCTTTGTCTTCTTAA+GGG | 0.349769 | 2_3:-48331 | Msa0269290:CDS |
| ACCCTTGACTTCTCGGGGTC+AGG | 0.351572 | 2_3:-54378 | Msa0269290:CDS |
| GCCAAATATTGGTTTCTGAT+TGG | 0.356584 | 2_3:-48148 | Msa0269290:three_prime_UTR |
| GAGAATTACAGCCGCTTCAT+TGG | 0.360136 | 2_3:+54425 | None:intergenic |
| AATATCCCGTATAGGTTTAT+GGG | 0.365038 | 2_3:-53974 | Msa0269290:CDS |
| AATACCATTCCAGCAATAGA+AGG | 0.376973 | 2_3:+53320 | None:intergenic |
| GCCGAAGACCCTTCTATTGC+TGG | 0.379355 | 2_3:-53329 | Msa0269290:CDS |
| AAGCTCAAATAGAGAAAGTT+GGG | 0.381819 | 2_3:-49553 | Msa0269290:CDS |
| TTATATATTGCCATGGAAAC+AGG | 0.382845 | 2_3:-54600 | Msa0269290:intron |
| CTCTTTCTTCACAACTCAAT+TGG | 0.388673 | 2_3:+55742 | None:intergenic |
| ATTACAATTAGATTGACTAT+TGG | 0.394016 | 2_3:+48249 | None:intergenic |
| AAATAAGCTGAGAAGAAGTA+TGG | 0.398646 | 2_3:+56138 | None:intergenic |
| TATGAAATTGAACTGTGTTC+TGG | 0.398736 | 2_3:-52197 | Msa0269290:intron |
| CTACCAAAGGCAGGATTTAG+AGG | 0.404625 | 2_3:-54827 | Msa0269290:intron |
| GAAAAGGAATTCTCTCTTGC+TGG | 0.411836 | 2_3:-54856 | Msa0269290:CDS |
| CGAAATGAAATGAAATGAAA+AGG | 0.413453 | 2_3:+56079 | None:intergenic |
| GATTTAGGGGATTTGAAACT+TGG | 0.415584 | 2_3:-51639 | Msa0269290:CDS |
| TGGTGTTCTTGGAATTGAAT+TGG | 0.420124 | 2_3:-56235 | Msa0269290:five_prime_UTR |
| ACAGATGACAATGATGGAAT+TGG | 0.425584 | 2_3:-50660 | Msa0269290:CDS |
| GGTCAATGGGCGCAGTTACT+AGG | 0.428894 | 2_3:-53948 | Msa0269290:intron |
| TTGCCTCTAAATCCTGCCTT+TGG | 0.430450 | 2_3:+54824 | None:intergenic |
| TTGTGGACGTTTATAAAATC+CGG | 0.430844 | 2_3:-53256 | Msa0269290:CDS |
| GTATCTTCAGGAAAAGGAAA+AGG | 0.432727 | 2_3:+54637 | None:intergenic |
| GGGGATTTGAAACTTGGTTC+CGG | 0.432780 | 2_3:-51633 | Msa0269290:CDS |
| CTTGCATGTCCAAATAAAAC+AGG | 0.434305 | 2_3:+51961 | None:intergenic |
| CTCAGCTTATTTGGTGGTGG+TGG | 0.435731 | 2_3:-56127 | Msa0269290:five_prime_UTR |
| GGACAGCTGGCTGAGGTGTT+TGG | 0.436350 | 2_3:-56255 | Msa0269290:five_prime_UTR |
| CTTCTCAGCTTATTTGGTGG+TGG | 0.438281 | 2_3:-56130 | Msa0269290:five_prime_UTR |
| GAGTGACAGATTTGAGAAGC+TGG | 0.441559 | 2_3:-48371 | Msa0269290:CDS |
| AGAGAGAGTACCGTGAACTT+TGG | 0.446970 | 2_3:+53230 | None:intergenic |
| AGATGACTTGTTTCTTCGAT+GGG | 0.453630 | 2_3:+48303 | None:intergenic |
| AGAGAAGTATCTTCAGGAAA+AGG | 0.459180 | 2_3:+54631 | None:intergenic |
| CTTCTTCTCAGCTTATTTGG+TGG | 0.459744 | 2_3:-56133 | Msa0269290:five_prime_UTR |
| ATGAGCAACAATCTTCAATC+TGG | 0.460440 | 2_3:+49580 | None:intergenic |
| GGCACCCTACTACATCAGTC+AGG | 0.465060 | 2_3:+50775 | None:intergenic |
| AAGATGACTTGTTTCTTCGA+TGG | 0.466764 | 2_3:+48302 | None:intergenic |
| CAAGGAAGAGAAGTATCTTC+AGG | 0.469007 | 2_3:+54625 | None:intergenic |
| CAAGCTCAAATAGAGAAAGT+TGG | 0.469326 | 2_3:-49554 | Msa0269290:CDS |
| GAGATAATGACTACACTTCA+AGG | 0.474252 | 2_3:+54660 | None:intergenic |
| TTTCCCACAGATACTGATCC+GGG | 0.477800 | 2_3:+54875 | None:intergenic |
| AAAACAGGAATGAATGTCTT+CGG | 0.479091 | 2_3:+51976 | None:intergenic |
| TCCAGCAATAGAAGGGTCTT+CGG | 0.485556 | 2_3:+53328 | None:intergenic |
| GAGATTATATAAGTTTGAAA+AGG | 0.488604 | 2_3:+53289 | None:intergenic |
| AAAAGAATAAATTGATAAGA+GGG | 0.488945 | 2_3:-56285 | Msa0269290:five_prime_UTR |
| ATTGTGGCCGGGAGGAATTA+TGG | 0.491620 | 2_3:+51748 | None:intergenic |
| TGATGAAGCCGCAAGTGTGC+AGG | 0.493167 | 2_3:-50634 | Msa0269290:intron |
| GAGAAGAAGTATGGTTAGAG+AGG | 0.493381 | 2_3:+56147 | None:intergenic |
| AAAACACAAATTTCGTGTGT+AGG | 0.494347 | 2_3:-48220 | Msa0269290:three_prime_UTR |
| AACAAACAAATATCCCGTAT+AGG | 0.496030 | 2_3:-53982 | Msa0269290:CDS |
| GAAATGAAATGAAATGAAAA+GGG | 0.497133 | 2_3:+56080 | None:intergenic |
| TAATGATAACAGCGAAATGA+AGG | 0.502100 | 2_3:+48125 | None:intergenic |
| CTCTAAATCCTGCCTTTGGT+AGG | 0.502347 | 2_3:+54828 | None:intergenic |
| TGCTGATGATAAGCTCTCTC+AGG | 0.502510 | 2_3:-49478 | Msa0269290:intron |
| AATTGATAAGAGGGAAAGAA+AGG | 0.506532 | 2_3:-56276 | Msa0269290:five_prime_UTR |
| TGGTAGCTTAGCTCAGACTT+TGG | 0.510902 | 2_3:-56107 | Msa0269290:five_prime_UTR |
| TTAAATGATGCAGTGGATGT+AGG | 0.518787 | 2_3:-54455 | Msa0269290:intron |
| AGATGAAAAGAAGCCGAAGA+AGG | 0.519297 | 2_3:-48440 | Msa0269290:CDS |
| AGACCCTTCTATTGCTGGAA+TGG | 0.522988 | 2_3:-53324 | Msa0269290:CDS |
| GAAACTACAGATGACAATGA+TGG | 0.526697 | 2_3:-50666 | Msa0269290:CDS |
| GGATCAGTATCTGTGGGAAA+AGG | 0.529501 | 2_3:-54872 | Msa0269290:CDS |
| ATTTCGTTATTCGCCCTCCC+AGG | 0.531333 | 2_3:-55591 | Msa0269290:intron |
| ATCATAAAAGAATTGTGGCC+GGG | 0.532049 | 2_3:+51737 | None:intergenic |
| AGATTGTGGTGTCGCATTTG+AGG | 0.532944 | 2_3:-54008 | Msa0269290:CDS |
| AAGAATAATAATACCTGGGA+GGG | 0.533025 | 2_3:+55578 | None:intergenic |
| TCGGGGTCAGGCTTATCTGA+TGG | 0.533663 | 2_3:-54366 | Msa0269290:CDS |
| GCGGCGGGTTATTGAGAAGA+AGG | 0.534978 | 2_3:-52233 | Msa0269290:CDS |
| TATCTTCAGGAAAAGGAAAA+GGG | 0.536605 | 2_3:+54638 | None:intergenic |
| GGCAGGTGTTCTTCATTAGG+AGG | 0.539678 | 2_3:-49531 | Msa0269290:CDS |
| CCTTGTGTTATATATTGCCA+TGG | 0.540136 | 2_3:-54607 | Msa0269290:CDS |
| GATGAAAAGAAGCCGAAGAA+GGG | 0.543208 | 2_3:-48439 | Msa0269290:CDS |
| GTATCTATCTTATAGCCACT+TGG | 0.543355 | 2_3:+55636 | None:intergenic |
| TGTAGTTTCATCTTCAAGCA+AGG | 0.545400 | 2_3:+50680 | None:intergenic |
| GTACCGTGAACTTTGGAAGC+CGG | 0.545459 | 2_3:+53237 | None:intergenic |
| AGCCTGACCCCGAGAAGTCA+AGG | 0.546559 | 2_3:+54376 | None:intergenic |
| AAACTTATATAATCTCATGA+TGG | 0.546998 | 2_3:-53282 | Msa0269290:CDS |
| TAATCTCATGATGGAGCTTG+TGG | 0.547533 | 2_3:-53273 | Msa0269290:CDS |
| ACTTGGTTCCGGTGTGGATG+AGG | 0.547607 | 2_3:-51622 | Msa0269290:intron |
| TTCTCTTTCATACTTCGCAA+AGG | 0.549432 | 2_3:+48481 | None:intergenic |
| AATCATAAAAGAATTGTGGC+CGG | 0.549501 | 2_3:+51736 | None:intergenic |
| GTAACACATACCTGTTTCCA+TGG | 0.551077 | 2_3:+54590 | None:intergenic |
| GTATTAAATTAATACCGCAT+AGG | 0.557960 | 2_3:+51891 | None:intergenic |
| AGGCTCTCAGCAGACGCTTG+CGG | 0.561762 | 2_3:-48348 | Msa0269290:CDS |
| GGCTGTACAATACATGCGGC+GGG | 0.564086 | 2_3:-52248 | Msa0269290:CDS |
| AGAGGGAAAGAAAGGACAGC+TGG | 0.565313 | 2_3:-56268 | Msa0269290:five_prime_UTR |
| TATGATATGATATACAAAAG+AGG | 0.565995 | 2_3:+48277 | None:intergenic |
| ATATCCCGTATAGGTTTATG+GGG | 0.567406 | 2_3:-53973 | Msa0269290:CDS |
| TAAATGATGCAGTGGATGTA+GGG | 0.568274 | 2_3:-54454 | Msa0269290:intron |
| CAAATAGAGAAAGTTGGGGC+AGG | 0.573325 | 2_3:-49548 | Msa0269290:CDS |
| ACTGAATCATAAAAGAATTG+TGG | 0.574633 | 2_3:+51732 | None:intergenic |
| ATGGCGACCATAATTCCTCC+CGG | 0.574950 | 2_3:-51755 | Msa0269290:CDS |
| ACACTTCAAGGTATAGCCTC+TGG | 0.577166 | 2_3:+54672 | None:intergenic |
| GTAGTTTCATCTTCAAGCAA+GGG | 0.578611 | 2_3:+50681 | None:intergenic |
| GGTCTTCGGCTCCATAAAGA+AGG | 0.579635 | 2_3:+53342 | None:intergenic |
| AAAGAAAGGACAGCTGGCTG+AGG | 0.581463 | 2_3:-56262 | Msa0269290:five_prime_UTR |
| GATGGAGACTATGTCAGCCT+TGG | 0.581558 | 2_3:-54348 | Msa0269290:CDS |
| GCACCCTACTACATCAGTCA+GGG | 0.585755 | 2_3:+50776 | None:intergenic |
| ATGAAATGAAATGAAAAGGG+TGG | 0.589383 | 2_3:+56083 | None:intergenic |
| GAAAGATGATCTGAAGATTG+TGG | 0.598855 | 2_3:-54022 | Msa0269290:CDS |
| AATCCGGCTTCCAAAGTTCA+CGG | 0.601063 | 2_3:-53240 | Msa0269290:intron |
| TGGTAGAACCTACCAAAGGC+AGG | 0.601644 | 2_3:-54836 | Msa0269290:CDS |
| TGAAATGAAATGAAAAGGGT+GGG | 0.607773 | 2_3:+56084 | None:intergenic |
| GAGACTATGTCAGCCTTGGT+TGG | 0.607802 | 2_3:-54344 | Msa0269290:CDS |
| AAAGATAACCTGCACACTTG+CGG | 0.608984 | 2_3:+50626 | None:intergenic |
| CGAGAAATATTATGATTTAG+GGG | 0.610738 | 2_3:-51652 | Msa0269290:CDS |
| AACTTACTTCGTGCCAACCA+AGG | 0.612981 | 2_3:+54331 | None:intergenic |
| GCACACTTGCGGCTTCATCA+GGG | 0.613086 | 2_3:+50637 | None:intergenic |
| TTTGAAACTTGGTTCCGGTG+TGG | 0.615743 | 2_3:-51628 | Msa0269290:CDS |
| ATACCATTCCAGCAATAGAA+GGG | 0.616504 | 2_3:+53321 | None:intergenic |
| CCATGGCAATATATAACACA+AGG | 0.617756 | 2_3:+54607 | None:intergenic |
| CAATAGAGACTTGAGGAGGA+CGG | 0.628343 | 2_3:+51685 | None:intergenic |
| ATTCATTTCATGACGCCAAG+TGG | 0.629844 | 2_3:-55651 | Msa0269290:five_prime_UTR |
| GTTAAATACCTCATCCACAC+CGG | 0.635215 | 2_3:+51614 | None:intergenic |
| TGGCTGTACAATACATGCGG+CGG | 0.639633 | 2_3:-52249 | Msa0269290:CDS |
| TCAGCAATAGAGACTTGAGG+AGG | 0.640185 | 2_3:+51681 | None:intergenic |
| GCCTGACCCCGAGAAGTCAA+GGG | 0.640197 | 2_3:+54377 | None:intergenic |
| TAGGGCAGATGCCAATGAAG+CGG | 0.642371 | 2_3:-54436 | Msa0269290:CDS |
| ATAACCCGGATCAGTATCTG+TGG | 0.647394 | 2_3:-54879 | Msa0269290:CDS |
| ACACAGGGCGGACTATAACC+CGG | 0.648856 | 2_3:-54893 | Msa0269290:intron |
| GTCATGTCAGAATACTGTGA+AGG | 0.652766 | 2_3:-48515 | Msa0269290:intron |
| ACGAGATTCTCTCTAGTCTG+CGG | 0.652977 | 2_3:-50890 | Msa0269290:CDS |
| AAAGAATAATAATACCTGGG+AGG | 0.656822 | 2_3:+55577 | None:intergenic |
| TGACAGATTTGAGAAGCTGG+AGG | 0.661868 | 2_3:-48368 | Msa0269290:CDS |
| TAACCCGGATCAGTATCTGT+GGG | 0.666671 | 2_3:-54878 | Msa0269290:CDS |
| AGCTCAAATAGAGAAAGTTG+GGG | 0.674107 | 2_3:-49552 | Msa0269290:CDS |
| AAATGGCTGTACAATACATG+CGG | 0.675349 | 2_3:-52252 | Msa0269290:CDS |
| TTGCTGGTAGAACCTACCAA+AGG | 0.679162 | 2_3:-54840 | Msa0269290:CDS |
| CACCCTACTACATCAGTCAG+GGG | 0.681270 | 2_3:+50777 | None:intergenic |
| GTGCAGCTCAAGAATGCCAG+AGG | 0.686724 | 2_3:-54688 | Msa0269290:intron |
| ATAAAAGAATTGTGGCCGGG+AGG | 0.694195 | 2_3:+51740 | None:intergenic |
| TAGAGACTTGAGGAGGACGG+AGG | 0.699920 | 2_3:+51688 | None:intergenic |
| TATCCCGTATAGGTTTATGG+GGG | 0.742479 | 2_3:-53972 | Msa0269290:CDS |
| GAGATGAGATCAGAGTGATG+CGG | 0.757183 | 2_3:+51919 | None:intergenic |
| TCTCATCTCAGAATCCTATG+CGG | 0.772408 | 2_3:-51905 | Msa0269290:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTAAGATTTTATTT+TGG | - | chr2_3:51459-51478 | Msa0269290:intron | 10.0% |
| !! | AAAAATATCATTAAATTTGA+TGG | - | chr2_3:52592-52611 | Msa0269290:intron | 10.0% |
| !! | AAAGTAACAATAATAATTTA+TGG | + | chr2_3:53340-53359 | None:intergenic | 10.0% |
| !! | AATTATATTGTAATTATGTT+AGG | + | chr2_3:55074-55093 | None:intergenic | 10.0% |
| !! | AAAAAGGAAAAAAAAAAAAA+AGG | - | chr2_3:55224-55243 | Msa0269290:intron | 10.0% |
| !! | AAAAAGAATAAATTGATAAG+AGG | - | chr2_3:48080-48099 | Msa0269290:three_prime_UTR | 15.0% |
| !! | AAAAGAATAAATTGATAAGA+GGG | - | chr2_3:48081-48100 | Msa0269290:three_prime_UTR | 15.0% |
| !! | AAAAAAGAATAATAATACCT+GGG | + | chr2_3:48795-48814 | None:intergenic | 15.0% |
| !! | TAAAAAAGAATAATAATACC+TGG | + | chr2_3:48796-48815 | None:intergenic | 15.0% |
| !!! | TCTTTTTTATTCATCAAATT+TGG | - | chr2_3:48807-48826 | Msa0269290:intron | 15.0% |
| !!! | AAAACTTTTTGAAATAGTAT+GGG | + | chr2_3:49228-49247 | None:intergenic | 15.0% |
| !! | AAGTTAGATAGAAATATATA+TGG | - | chr2_3:50486-50505 | Msa0269290:intron | 15.0% |
| !! | AAATTGTTAAAACAAAAGTT+GGG | - | chr2_3:51524-51543 | Msa0269290:intron | 15.0% |
| !!! | CAAAGAACATAATTTTTTTT+GGG | + | chr2_3:52831-52850 | None:intergenic | 15.0% |
| !!! | ACAAAGAACATAATTTTTTT+TGG | + | chr2_3:52832-52851 | None:intergenic | 15.0% |
| !!! | ATGGTAATATTTAAGTTATA+TGG | - | chr2_3:53037-53056 | Msa0269290:intron | 15.0% |
| !! | TAAAATTGAAGATATTAACT+TGG | - | chr2_3:53084-53103 | Msa0269290:intron | 15.0% |
| !! | AAAATGGAAAAACAAAAAAA+AGG | - | chr2_3:53151-53170 | Msa0269290:intron | 15.0% |
| !! | AACATTATCATGATTATATA+TGG | - | chr2_3:53278-53297 | Msa0269290:CDS | 15.0% |
| !!! | TTATTATTGTTACTTTTTTG+TGG | - | chr2_3:53344-53363 | Msa0269290:CDS | 15.0% |
| !!! | TTTTATATTAGTATGGTTTT+AGG | - | chr2_3:53372-53391 | Msa0269290:intron | 15.0% |
| !!! | AACTAAATAGAAAGTTTTTT+TGG | + | chr2_3:53641-53660 | None:intergenic | 15.0% |
| !! | TAAAATATAATTCACGAAAT+CGG | + | chr2_3:54114-54133 | None:intergenic | 15.0% |
| !! | ATGCTAAAATTATAAAAATG+TGG | + | chr2_3:54715-54734 | None:intergenic | 15.0% |
| !!! | TTTTTTTCCTTTTTTAGTTT+TGG | + | chr2_3:55218-55237 | None:intergenic | 15.0% |
| !! | GAAATGAAATGAAATGAAAA+GGG | + | chr2_3:48289-48308 | None:intergenic | 20.0% |
| !!! | CTTTTCATTTCATTTCATTT+CGG | - | chr2_3:48288-48307 | Msa0269290:exon | 20.0% |
| !!! | ACTACTACTTTTTCATTTTT+CGG | - | chr2_3:48532-48551 | Msa0269290:intron | 20.0% |
| !!! | ATTTTAATAAGCTATATTGG+AGG | + | chr2_3:48949-48968 | None:intergenic | 20.0% |
| !!! | GGTATTTTAATAAGCTATAT+TGG | + | chr2_3:48952-48971 | None:intergenic | 20.0% |
| !!! | AAACATCATATTAACTTGTT+TGG | + | chr2_3:49091-49110 | None:intergenic | 20.0% |
| !!! | ATGTTTATCTTCTTTTGATT+TGG | - | chr2_3:49157-49176 | Msa0269290:intron | 20.0% |
| !!! | AAACTTTTTGAAATAGTATG+GGG | + | chr2_3:49227-49246 | None:intergenic | 20.0% |
| !!! | CAAAACTTTTTGAAATAGTA+TGG | + | chr2_3:49229-49248 | None:intergenic | 20.0% |
| !!! | CATACTATTTCAAAAAGTTT+TGG | - | chr2_3:49227-49246 | Msa0269290:intron | 20.0% |
| !!! | AGTATCGAGTATTTATTTTA+TGG | - | chr2_3:49564-49583 | Msa0269290:CDS | 20.0% |
| !!! | GTATCGAGTATTTATTTTAT+GGG | - | chr2_3:49565-49584 | Msa0269290:CDS | 20.0% |
| !! | GTAAAAACAGTAATATTTGA+TGG | + | chr2_3:49970-49989 | None:intergenic | 20.0% |
| !!! | ATTAAGAATTTATGCTGTTT+TGG | - | chr2_3:50594-50613 | Msa0269290:intron | 20.0% |
| !!! | AATATTTTTGTTTCAAACAC+AGG | + | chr2_3:50783-50802 | None:intergenic | 20.0% |
| !! | GAGATTATATAAGTTTGAAA+AGG | + | chr2_3:51080-51099 | None:intergenic | 20.0% |
| !! | AAACTTATATAATCTCATGA+TGG | - | chr2_3:51084-51103 | Msa0269290:intron | 20.0% |
| !!! | TTCAAGTCTTTTACAATAAA+GGG | + | chr2_3:51217-51236 | None:intergenic | 20.0% |
| !!! | TTTCAAGTCTTTTACAATAA+AGG | + | chr2_3:51218-51237 | None:intergenic | 20.0% |
| !!! | TAATTTCCTTTTTGTTAAGA+TGG | - | chr2_3:51392-51411 | Msa0269290:intron | 20.0% |
| !!! | TAAGATTTTATTTTGGATCT+AGG | - | chr2_3:51466-51485 | Msa0269290:intron | 20.0% |
| !!! | AAGATTTTATTTTGGATCTA+GGG | - | chr2_3:51467-51486 | Msa0269290:intron | 20.0% |
| !!! | AATTATAGCTCTTTTTTACT+AGG | - | chr2_3:51501-51520 | Msa0269290:intron | 20.0% |
| !! | GAAATTGTTAAAACAAAAGT+TGG | - | chr2_3:51523-51542 | Msa0269290:intron | 20.0% |
| !! | AATTGTTAAAACAAAAGTTG+GGG | - | chr2_3:51525-51544 | Msa0269290:intron | 20.0% |
| !! | ATTATTAATCATGACAAGTT+TGG | - | chr2_3:51549-51568 | Msa0269290:intron | 20.0% |
| !!! | GAATATACTTTTATTTTGCA+TGG | - | chr2_3:51586-51605 | Msa0269290:intron | 20.0% |
| !! | AACTAGTATCATGTATAATT+AGG | - | chr2_3:51683-51702 | Msa0269290:CDS | 20.0% |
| !! | AAAAAAATCTTTATGCATTG+TGG | + | chr2_3:51731-51750 | None:intergenic | 20.0% |
| !! | TATATAGTTGTATACCAATT+TGG | + | chr2_3:51830-51849 | None:intergenic | 20.0% |
| !!! | TGATTTTATAACTTTTATGC+TGG | - | chr2_3:51974-51993 | Msa0269290:CDS | 20.0% |
| !!! | GCATTAATTTAAGATAGAAA+TGG | + | chr2_3:52349-52368 | None:intergenic | 20.0% |
| !!! | TAAACAGAAGTTAGATATTT+TGG | + | chr2_3:52555-52574 | None:intergenic | 20.0% |
| !! | TCGAGAAATATTATGATTTA+GGG | - | chr2_3:52713-52732 | Msa0269290:intron | 20.0% |
| !! | ACATTTAACTAAATTCTTTG+AGG | + | chr2_3:52993-53012 | None:intergenic | 20.0% |
| !! | TTATCCATTACTTATAATGT+AGG | - | chr2_3:53660-53679 | Msa0269290:intron | 20.0% |
| !! | TACATGTAAAATAAAATTCC+TGG | + | chr2_3:53796-53815 | None:intergenic | 20.0% |
| !!! | AGGAATTTTATTTTACATGT+AGG | - | chr2_3:53795-53814 | Msa0269290:intron | 20.0% |
| !! | AGTAAATAAAATACTAGCAA+AGG | + | chr2_3:54088-54107 | None:intergenic | 20.0% |
| !! | TTAAGAAAAGTTAATCTCAA+AGG | + | chr2_3:54271-54290 | None:intergenic | 20.0% |
| !! | GAGTAGTTTATTATAAGAAA+AGG | - | chr2_3:54516-54535 | Msa0269290:intron | 20.0% |
| !!! | AAAGTATTTTTTCTCAAATG+CGG | + | chr2_3:55689-55708 | None:intergenic | 20.0% |
| !! | TATGATATGATATACAAAAG+AGG | + | chr2_3:56092-56111 | None:intergenic | 20.0% |
| !! | ATTACAATTAGATTGACTAT+TGG | + | chr2_3:56120-56139 | None:intergenic | 20.0% |
| ! | CGAAATGAAATGAAATGAAA+AGG | + | chr2_3:48290-48309 | None:intergenic | 25.0% |
| !! | TTTTCGACTTTAATCTTTCT+TGG | + | chr2_3:48374-48393 | None:intergenic | 25.0% |
| ! | ACAAGCAAGTTTATGAAATA+TGG | + | chr2_3:48454-48473 | None:intergenic | 25.0% |
| !!! | TCAATGTCATACTACTTTTA+AGG | - | chr2_3:48489-48508 | Msa0269290:CDS | 25.0% |
| !!! | CAATGTCATACTACTTTTAA+GGG | - | chr2_3:48490-48509 | Msa0269290:CDS | 25.0% |
| !!! | CTACTACTTTTTCATTTTTC+GGG | - | chr2_3:48533-48552 | Msa0269290:intron | 25.0% |
| ! | AAACAATCTCACAAAACTTA+TGG | + | chr2_3:48862-48881 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGAGATTGTT+TGG | - | chr2_3:48861-48880 | Msa0269290:intron | 25.0% |
| !!! | CATAAGCTATTTTATAGCAA+AGG | + | chr2_3:49013-49032 | None:intergenic | 25.0% |
| ! | ATAATGAGAACTATCTAACA+TGG | + | chr2_3:49291-49310 | None:intergenic | 25.0% |
| ! | CAATTATTGTTGCCTATATA+TGG | - | chr2_3:49594-49613 | Msa0269290:CDS | 25.0% |
| ! | AAATAAACACATTCACAAAG+AGG | + | chr2_3:50062-50081 | None:intergenic | 25.0% |
| ! | TATGTCATATTATCCTTAGT+TGG | - | chr2_3:50153-50172 | Msa0269290:intron | 25.0% |
| ! | CAAAAAACACATTCATAAAG+AGG | + | chr2_3:50193-50212 | None:intergenic | 25.0% |
| ! | TAAATCGGAAAAACATAAAG+CGG | - | chr2_3:50817-50836 | Msa0269290:CDS | 25.0% |
| ! | ATGTATACAGAGAAAATGTA+AGG | + | chr2_3:50939-50958 | None:intergenic | 25.0% |
| ! | TACTTTCCATCTTAACAAAA+AGG | + | chr2_3:51401-51420 | None:intergenic | 25.0% |
| ! | AAGATGGAAAGTAAAGAAAA+AGG | - | chr2_3:51408-51427 | Msa0269290:intron | 25.0% |
| ! | AAGTATATTCTTCAATCCTA+GGG | + | chr2_3:51437-51456 | None:intergenic | 25.0% |
| ! | TAAGTATATTCTTCAATCCT+AGG | + | chr2_3:51438-51457 | None:intergenic | 25.0% |
| ! | AAAAGAGCTATAATTATGAG+AGG | + | chr2_3:51496-51515 | None:intergenic | 25.0% |
| !!! | ATTTTGCATGGTTGTTTTTA+AGG | - | chr2_3:51598-51617 | Msa0269290:intron | 25.0% |
| !!! | TTTTGCATGGTTGTTTTTAA+GGG | - | chr2_3:51599-51618 | Msa0269290:intron | 25.0% |
| !!! | TGAACTATTTTTTAAGCTGT+AGG | - | chr2_3:51764-51783 | Msa0269290:CDS | 25.0% |
| ! | AGCTGAAAATCAAAATATGT+GGG | + | chr2_3:51800-51819 | None:intergenic | 25.0% |
| ! | GTATACAACTATATATGCAT+TGG | - | chr2_3:51835-51854 | Msa0269290:intron | 25.0% |
| !!! | TATGCATTGGATTTACTTTT+AGG | - | chr2_3:51848-51867 | Msa0269290:intron | 25.0% |
| ! | TCATTCAATCAAACAATACA+CGG | + | chr2_3:51912-51931 | None:intergenic | 25.0% |
| ! | AAACAAAATATGATCGATGA+AGG | + | chr2_3:52252-52271 | None:intergenic | 25.0% |
| !!! | ACATTCATTCCTGTTTTATT+TGG | - | chr2_3:52396-52415 | Msa0269290:intron | 25.0% |
| ! | GTATTAAATTAATACCGCAT+AGG | + | chr2_3:52478-52497 | None:intergenic | 25.0% |
| !!! | GTTAGATATTTTGGCTATTA+AGG | + | chr2_3:52546-52565 | None:intergenic | 25.0% |
| ! | ACTTCTGTTTATGAATTTGT+AGG | - | chr2_3:52564-52583 | Msa0269290:intron | 25.0% |
| ! | CTTCTGTTTATGAATTTGTA+GGG | - | chr2_3:52565-52584 | Msa0269290:intron | 25.0% |
| ! | ACTGAATCATAAAAGAATTG+TGG | + | chr2_3:52637-52656 | None:intergenic | 25.0% |
| ! | CTCGAGAAATATTATGATTT+AGG | - | chr2_3:52712-52731 | Msa0269290:intron | 25.0% |
| ! | CGAGAAATATTATGATTTAG+GGG | - | chr2_3:52714-52733 | Msa0269290:intron | 25.0% |
| ! | TTATTTGTGAACTAACGAAA+TGG | - | chr2_3:53018-53037 | Msa0269290:intron | 25.0% |
| ! | AATGTTTCCAAAAACTGAAA+TGG | + | chr2_3:53264-53283 | None:intergenic | 25.0% |
| !!! | GGCATTGTTTTATATTAGTA+TGG | - | chr2_3:53365-53384 | Msa0269290:intron | 25.0% |
| ! | AAAAAATAGACAGAAGGTTA+AGG | + | chr2_3:53615-53634 | None:intergenic | 25.0% |
| ! | TTGTCTGTGAAATTAAGAAA+TGG | - | chr2_3:53769-53788 | Msa0269290:intron | 25.0% |
| !! | AAACTGCAAATGCAATTTTA+AGG | - | chr2_3:54153-54172 | Msa0269290:intron | 25.0% |
| !!! | TGCAATTTTAAGGTTACTTT+CGG | - | chr2_3:54163-54182 | Msa0269290:intron | 25.0% |
| ! | AAAACTAAGTCTTGATTGAA+TGG | - | chr2_3:54454-54473 | Msa0269290:intron | 25.0% |
| ! | AAACTAAGTCTTGATTGAAT+GGG | - | chr2_3:54455-54474 | Msa0269290:intron | 25.0% |
| !! | TTTCATTAGTAGACTTTTTG+TGG | - | chr2_3:54485-54504 | Msa0269290:intron | 25.0% |
| !!! | TTTTAAGTGTTGTTTTACTC+TGG | - | chr2_3:54581-54600 | Msa0269290:intron | 25.0% |
| !! | TTGACCATTAATGACTTTTA+GGG | - | chr2_3:54751-54770 | Msa0269290:intron | 25.0% |
| ! | CCTTGCTTATATATATTTCA+TGG | + | chr2_3:55179-55198 | None:intergenic | 25.0% |
| ! | CCATGAAATATATATAAGCA+AGG | - | chr2_3:55176-55195 | Msa0269290:intron | 25.0% |
| !!! | TTTAGTTTTGGACCTAAATT+TGG | + | chr2_3:55206-55225 | None:intergenic | 25.0% |
| ! | TTTAGGTCCAAAACTAAAAA+AGG | - | chr2_3:55208-55227 | Msa0269290:intron | 25.0% |
| ! | AAAAAAAAAAAAGGACACCA+AGG | - | chr2_3:55233-55252 | Msa0269290:intron | 25.0% |
| ! | AAAAAAAAAAAGGACACCAA+GGG | - | chr2_3:55234-55253 | Msa0269290:intron | 25.0% |
| ! | AAAAGTGAGAATTTGAGAAA+TGG | + | chr2_3:55399-55418 | None:intergenic | 25.0% |
| ! | AGAATAGAAGATGTAGAAAT+TGG | - | chr2_3:55538-55557 | Msa0269290:intron | 25.0% |
| ! | GAATAGAAGATGTAGAAATT+GGG | - | chr2_3:55539-55558 | Msa0269290:intron | 25.0% |
| ! | AATAGAAGATGTAGAAATTG+GGG | - | chr2_3:55540-55559 | Msa0269290:intron | 25.0% |
| !!! | TTTTAGGAATTGCCAAATAT+TGG | - | chr2_3:56207-56226 | Msa0269290:five_prime_UTR | 25.0% |
| ! | TTTAGGAATTGCCAAATATT+TGG | - | chr2_3:56208-56227 | Msa0269290:five_prime_UTR | 25.0% |
| AATTGATAAGAGGGAAAGAA+AGG | - | chr2_3:48090-48109 | Msa0269290:three_prime_UTR | 30.0% | |
| AAATAAGCTGAGAAGAAGTA+TGG | + | chr2_3:48231-48250 | None:intergenic | 30.0% | |
| ATACTTCTTCTCAGCTTATT+TGG | - | chr2_3:48230-48249 | Msa0269290:three_prime_UTR | 30.0% | |
| TGAAATGAAATGAAAAGGGT+GGG | + | chr2_3:48285-48304 | None:intergenic | 30.0% | |
| ATGAAATGAAATGAAAAGGG+TGG | + | chr2_3:48286-48305 | None:intergenic | 30.0% | |
| ACTTTAATCTTTCTTGGCTT+GGG | + | chr2_3:48368-48387 | None:intergenic | 30.0% | |
| ! | TGCGTCAATTTTTCATCATT+TGG | - | chr2_3:48396-48415 | Msa0269290:CDS | 30.0% |
| ! | GCGTCAATTTTTCATCATTT+GGG | - | chr2_3:48397-48416 | Msa0269290:CDS | 30.0% |
| ! | GATTCTTTTAAACTTCTCAC+AGG | - | chr2_3:48555-48574 | Msa0269290:intron | 30.0% |
| TTTAAACTTCTCACAGGAAT+TGG | - | chr2_3:48561-48580 | Msa0269290:intron | 30.0% | |
| AAGAATAATAATACCTGGGA+GGG | + | chr2_3:48791-48810 | None:intergenic | 30.0% | |
| AAAGAATAATAATACCTGGG+AGG | + | chr2_3:48792-48811 | None:intergenic | 30.0% | |
| TAAGATAAGCTGCTCAAATA+AGG | + | chr2_3:48837-48856 | None:intergenic | 30.0% | |
| ATGTTTCTTTCTTCACTAAG+AGG | - | chr2_3:49105-49124 | Msa0269290:intron | 30.0% | |
| TTGCAAATTGAGTTACAGTT+TGG | - | chr2_3:49430-49449 | Msa0269290:intron | 30.0% | |
| TGCAAATTGAGTTACAGTTT+GGG | - | chr2_3:49431-49450 | Msa0269290:intron | 30.0% | |
| TATTGTTGCCTATATATGGA+AGG | - | chr2_3:49598-49617 | Msa0269290:intron | 30.0% | |
| TATCTTCAGGAAAAGGAAAA+GGG | + | chr2_3:49731-49750 | None:intergenic | 30.0% | |
| TTATATATTGCCATGGAAAC+AGG | - | chr2_3:49766-49785 | Msa0269290:intron | 30.0% | |
| !!! | ACAGGTATGTGTTACTTTTA+TGG | - | chr2_3:49784-49803 | Msa0269290:intron | 30.0% |
| ACAAGTACACATATCAAAAG+GGG | + | chr2_3:49890-49909 | None:intergenic | 30.0% | |
| CACAAGTACACATATCAAAA+GGG | + | chr2_3:49891-49910 | None:intergenic | 30.0% | |
| ACACAAGTACACATATCAAA+AGG | + | chr2_3:49892-49911 | None:intergenic | 30.0% | |
| AACAAACAAATATCCCGTAT+AGG | - | chr2_3:50384-50403 | Msa0269290:intron | 30.0% | |
| AAATATCCCGTATAGGTTTA+TGG | - | chr2_3:50391-50410 | Msa0269290:intron | 30.0% | |
| AATATCCCGTATAGGTTTAT+GGG | - | chr2_3:50392-50411 | Msa0269290:intron | 30.0% | |
| TAGAACATTATTGCATCGTT+TGG | - | chr2_3:50516-50535 | Msa0269290:intron | 30.0% | |
| AAATCGGAAAAACATAAAGC+GGG | - | chr2_3:50818-50837 | Msa0269290:CDS | 30.0% | |
| !! | TAATGTTCACTTTGCTTTTG+TGG | - | chr2_3:50994-51013 | Msa0269290:intron | 30.0% |
| !! | AATGTTCACTTTGCTTTTGT+GGG | - | chr2_3:50995-51014 | Msa0269290:intron | 30.0% |
| TTGTGGACGTTTATAAAATC+CGG | - | chr2_3:51110-51129 | Msa0269290:intron | 30.0% | |
| ! | TCTTTTACAATAAAGGGAGT+TGG | + | chr2_3:51211-51230 | None:intergenic | 30.0% |
| !!! | TTTGCATGGTTGTTTTTAAG+GGG | - | chr2_3:51600-51619 | Msa0269290:intron | 30.0% |
| ATGATACTAGTTGAAACTCT+CGG | + | chr2_3:51675-51694 | None:intergenic | 30.0% | |
| !!! | ATTTTTTAAGCTGTAGGTGT+AGG | - | chr2_3:51770-51789 | Msa0269290:CDS | 30.0% |
| GAGCTGAAAATCAAAATATG+TGG | + | chr2_3:51801-51820 | None:intergenic | 30.0% | |
| GTTTGATTGAATGAATGAAC+TGG | - | chr2_3:51918-51937 | Msa0269290:CDS | 30.0% | |
| GTTATAAAATCACGCAAACT+AGG | + | chr2_3:51966-51985 | None:intergenic | 30.0% | |
| ! | GTCTAGTATGTTTGTTAAGT+CGG | - | chr2_3:52059-52078 | Msa0269290:intron | 30.0% |
| TTCTCCCAATTAGGTTAAAA+TGG | - | chr2_3:52097-52116 | Msa0269290:intron | 30.0% | |
| !! | ACAGCCATTTTAACCTAATT+GGG | + | chr2_3:52104-52123 | None:intergenic | 30.0% |
| !! | TACAGCCATTTTAACCTAAT+TGG | + | chr2_3:52105-52124 | None:intergenic | 30.0% |
| TATGAAATTGAACTGTGTTC+TGG | - | chr2_3:52169-52188 | Msa0269290:intron | 30.0% | |
| !!! | TTAATGCTTTTAAAGCGTAC+AGG | - | chr2_3:52362-52381 | Msa0269290:intron | 30.0% |
| AAAACAGGAATGAATGTCTT+CGG | + | chr2_3:52393-52412 | None:intergenic | 30.0% | |
| AATCATAAAAGAATTGTGGC+CGG | + | chr2_3:52633-52652 | None:intergenic | 30.0% | |
| AAGAACATAATTAAGTGAGC+AGG | + | chr2_3:52801-52820 | None:intergenic | 30.0% | |
| TCTTGAGCAAGGTAAAATTA+TGG | + | chr2_3:53126-53145 | None:intergenic | 30.0% | |
| ! | TCAACTTCCATTTCAGTTTT+TGG | - | chr2_3:53254-53273 | Msa0269290:CDS | 30.0% |
| ! | GATTTTGTTGCAGATATTGT+TGG | + | chr2_3:53541-53560 | None:intergenic | 30.0% |
| TGGAAGAAAAAATAGACAGA+AGG | + | chr2_3:53621-53640 | None:intergenic | 30.0% | |
| TTGAAGAACTTTGCAATTTG+AGG | + | chr2_3:53933-53952 | None:intergenic | 30.0% | |
| !!! | TTTTAAGGTTACTTTCGGAA+TGG | - | chr2_3:54168-54187 | Msa0269290:intron | 30.0% |
| ! | TTTAAGGTTACTTTCGGAAT+GGG | - | chr2_3:54169-54188 | Msa0269290:intron | 30.0% |
| ACTTGTGAAAAAATCCTTGT+AGG | + | chr2_3:54390-54409 | None:intergenic | 30.0% | |
| !!! | ACTTAGTTTTTAGAGTAGTG+GGG | + | chr2_3:54444-54463 | None:intergenic | 30.0% |
| !!! | GACTTAGTTTTTAGAGTAGT+GGG | + | chr2_3:54445-54464 | None:intergenic | 30.0% |
| !!! | AGACTTAGTTTTTAGAGTAG+TGG | + | chr2_3:54446-54465 | None:intergenic | 30.0% |
| TAACTATGATCTGTTGATCA+GGG | + | chr2_3:54547-54566 | None:intergenic | 30.0% | |
| ATAACTATGATCTGTTGATC+AGG | + | chr2_3:54548-54567 | None:intergenic | 30.0% | |
| ACATAAAGCTAACAAAGACA+TGG | + | chr2_3:54613-54632 | None:intergenic | 30.0% | |
| GAAGTTAAAATTGACAAGTG+TGG | - | chr2_3:54680-54699 | Msa0269290:CDS | 30.0% | |
| ! | CTTGACCATTAATGACTTTT+AGG | - | chr2_3:54750-54769 | Msa0269290:intron | 30.0% |
| AAGCTCAAATAGAGAAAGTT+GGG | - | chr2_3:54813-54832 | Msa0269290:intron | 30.0% | |
| !! | GTTAGGAGTAATTAGTCTTT+AGG | + | chr2_3:55057-55076 | None:intergenic | 30.0% |
| CACTTAAGTAGGTTAATGAA+GGG | + | chr2_3:55130-55149 | None:intergenic | 30.0% | |
| TCACTTAAGTAGGTTAATGA+AGG | + | chr2_3:55131-55150 | None:intergenic | 30.0% | |
| GAATAGGTAATATTGACCAA+GGG | - | chr2_3:55256-55275 | Msa0269290:intron | 30.0% | |
| AAGATGGTAAATTGACATCA+TGG | - | chr2_3:55280-55299 | Msa0269290:intron | 30.0% | |
| TTGACATCATGGCTATAAAT+AGG | - | chr2_3:55291-55310 | Msa0269290:intron | 30.0% | |
| ATCAGAGTTCACAAAATTTG+CGG | - | chr2_3:55331-55350 | Msa0269290:intron | 30.0% | |
| ATTTGAGAAATGGTGATTTG+TGG | + | chr2_3:55389-55408 | None:intergenic | 30.0% | |
| !! | ACTTGTTTGTGGTTTTACTA+CGG | + | chr2_3:55435-55454 | None:intergenic | 30.0% |
| CTGAAAATTCTACTTGTTTG+TGG | + | chr2_3:55446-55465 | None:intergenic | 30.0% | |
| TAAATAAGCTTCTTCACACT+TGG | + | chr2_3:55483-55502 | None:intergenic | 30.0% | |
| AGAAGCTTATTTACTGAAGA+TGG | - | chr2_3:55490-55509 | Msa0269290:intron | 30.0% | |
| ATAGAAGATGTAGAAATTGG+GGG | - | chr2_3:55541-55560 | Msa0269290:intron | 30.0% | |
| ! | ATTTGCCTGCTAGTTTATAT+AGG | - | chr2_3:55779-55798 | Msa0269290:five_prime_UTR | 30.0% |
| ! | TTTGCCTGCTAGTTTATATA+GGG | - | chr2_3:55780-55799 | Msa0269290:five_prime_UTR | 30.0% |
| TAGCAATAAATACACATGAG+TGG | + | chr2_3:55820-55839 | None:intergenic | 30.0% | |
| ! | TTCTTCTTTTTACCCTTCTT+CGG | + | chr2_3:55942-55961 | None:intergenic | 30.0% |
| GAAGAAGAAAAAAGCTGAAA+CGG | - | chr2_3:55956-55975 | Msa0269290:intron | 30.0% | |
| AAAACACAAATTTCGTGTGT+AGG | - | chr2_3:56146-56165 | Msa0269290:five_prime_UTR | 30.0% | |
| !! | AGCATGACTAACTCATTTTT+AGG | - | chr2_3:56191-56210 | Msa0269290:five_prime_UTR | 30.0% |
| TAATGATAACAGCGAAATGA+AGG | + | chr2_3:56244-56263 | None:intergenic | 30.0% | |
| ! | GAACATGACTAACTCATTTT+AGG | - | chr2_3:56272-56291 | Msa0269290:five_prime_UTR | 30.0% |
| TGGTGTTCTTGGAATTGAAT+TGG | - | chr2_3:48131-48150 | Msa0269290:three_prime_UTR | 35.0% | |
| GACTTTAATCTTTCTTGGCT+TGG | + | chr2_3:48369-48388 | None:intergenic | 35.0% | |
| GTAGTAGTTTCAGATCCAAA+TGG | + | chr2_3:48520-48539 | None:intergenic | 35.0% | |
| CTCTTTCTTCACAACTCAAT+TGG | + | chr2_3:48627-48646 | None:intergenic | 35.0% | |
| AGTTGTGAAGAAAGAGAGAT+TGG | - | chr2_3:48631-48650 | Msa0269290:intron | 35.0% | |
| GTATCTATCTTATAGCCACT+TGG | + | chr2_3:48733-48752 | None:intergenic | 35.0% | |
| TAAGCTATATTGGAGGACTT+AGG | + | chr2_3:48942-48961 | None:intergenic | 35.0% | |
| ! | TGTGTTTTGTGTATGCTGTA+AGG | + | chr2_3:48973-48992 | None:intergenic | 35.0% |
| TTCTTCACTAAGAGGTCAAT+AGG | - | chr2_3:49113-49132 | Msa0269290:intron | 35.0% | |
| TCTTCACTAAGAGGTCAATA+GGG | - | chr2_3:49114-49133 | Msa0269290:intron | 35.0% | |
| ! | CATGGTTCTTTGAAGATTGT+TGG | + | chr2_3:49273-49292 | None:intergenic | 35.0% |
| ACATGTTGAGACTTGAGAAA+TGG | + | chr2_3:49396-49415 | None:intergenic | 35.0% | |
| TTATACTTTGCCACATACAC+AGG | - | chr2_3:49457-49476 | Msa0269290:intron | 35.0% | |
| TATACTTTGCCACATACACA+GGG | - | chr2_3:49458-49477 | Msa0269290:intron | 35.0% | |
| GTGATGTACCTTCCATATAT+AGG | + | chr2_3:49609-49628 | None:intergenic | 35.0% | |
| GAGATAATGACTACACTTCA+AGG | + | chr2_3:49709-49728 | None:intergenic | 35.0% | |
| GTATCTTCAGGAAAAGGAAA+AGG | + | chr2_3:49732-49751 | None:intergenic | 35.0% | |
| !! | AGAGAAGTATCTTCAGGAAA+AGG | + | chr2_3:49738-49757 | None:intergenic | 35.0% |
| CCATGGCAATATATAACACA+AGG | + | chr2_3:49762-49781 | None:intergenic | 35.0% | |
| CCTTGTGTTATATATTGCCA+TGG | - | chr2_3:49759-49778 | Msa0269290:intron | 35.0% | |
| TAATTCAGAACCAATAGCAG+TGG | + | chr2_3:49810-49829 | None:intergenic | 35.0% | |
| ACTTGTGTTAAATGATGCAG+TGG | - | chr2_3:49904-49923 | Msa0269290:intron | 35.0% | |
| TTAAATGATGCAGTGGATGT+AGG | - | chr2_3:49911-49930 | Msa0269290:intron | 35.0% | |
| TAAATGATGCAGTGGATGTA+GGG | - | chr2_3:49912-49931 | Msa0269290:intron | 35.0% | |
| !! | TGTTTTTACCCTTGACTTCT+CGG | - | chr2_3:49981-50000 | Msa0269290:intron | 35.0% |
| !! | TGTTTTTACCCTTGTCTTCT+CGG | - | chr2_3:50107-50126 | Msa0269290:intron | 35.0% |
| AAGTTACTTCAAGCCAACTA+AGG | + | chr2_3:50169-50188 | None:intergenic | 35.0% | |
| TCTTGCACGTGAAATTGTAA+CGG | + | chr2_3:50286-50305 | None:intergenic | 35.0% | |
| ATCATCTTTCTACCACACAA+AGG | + | chr2_3:50334-50353 | None:intergenic | 35.0% | |
| GAAAGATGATCTGAAGATTG+TGG | - | chr2_3:50344-50363 | Msa0269290:intron | 35.0% | |
| ATATCCCGTATAGGTTTATG+GGG | - | chr2_3:50393-50412 | Msa0269290:intron | 35.0% | |
| AAAACTTATCCCACTAAGTG+GGG | + | chr2_3:50555-50574 | None:intergenic | 35.0% | |
| CAAAACTTATCCCACTAAGT+GGG | + | chr2_3:50556-50575 | None:intergenic | 35.0% | |
| GTATCTCACCAAGAAAAGAA+AGG | - | chr2_3:50637-50656 | Msa0269290:CDS | 35.0% | |
| ! | ATTGAGGTCCTTTCTTTTCT+TGG | + | chr2_3:50648-50667 | None:intergenic | 35.0% |
| AAGAAAAGAAAGGACCTCAA+TGG | - | chr2_3:50647-50666 | Msa0269290:CDS | 35.0% | |
| AGAAAAGAAAGGACCTCAAT+GGG | - | chr2_3:50648-50667 | Msa0269290:CDS | 35.0% | |
| TATGTGAAAATCACCCATTG+AGG | + | chr2_3:50664-50683 | None:intergenic | 35.0% | |
| ! | TCCACTAAAGTTTTCTGTCA+AGG | - | chr2_3:50699-50718 | Msa0269290:intron | 35.0% |
| ! | CCACTAAAGTTTTCTGTCAA+GGG | - | chr2_3:50700-50719 | Msa0269290:intron | 35.0% |
| ATACCATTCCAGCAATAGAA+GGG | + | chr2_3:51048-51067 | None:intergenic | 35.0% | |
| AATACCATTCCAGCAATAGA+AGG | + | chr2_3:51049-51068 | None:intergenic | 35.0% | |
| TTCTATTGCTGGAATGGTAT+TGG | - | chr2_3:51048-51067 | Msa0269290:intron | 35.0% | |
| CATTCTTCATAAGTTGTTGC+TGG | - | chr2_3:51298-51317 | Msa0269290:intron | 35.0% | |
| GTAAAGAAAAAGGAATCCCT+AGG | - | chr2_3:51418-51437 | Msa0269290:intron | 35.0% | |
| ATGTATAATTAGGCCAAAGC+TGG | - | chr2_3:51693-51712 | Msa0269290:CDS | 35.0% | |
| TGTATAATTAGGCCAAAGCT+GGG | - | chr2_3:51694-51713 | Msa0269290:CDS | 35.0% | |
| CAATTCTAACTGACAGCTAT+AGG | + | chr2_3:52040-52059 | None:intergenic | 35.0% | |
| ! | TGTTGCATTTTCTCCCAATT+AGG | - | chr2_3:52088-52107 | Msa0269290:intron | 35.0% |
| AAATGGCTGTACAATACATG+CGG | - | chr2_3:52114-52133 | Msa0269290:intron | 35.0% | |
| ATGACGAATCTAACCACAAT+AGG | - | chr2_3:52281-52300 | Msa0269290:intron | 35.0% | |
| !! | AACCACAATAGGCTTTATTC+AGG | - | chr2_3:52292-52311 | Msa0269290:intron | 35.0% |
| AACCTGAATAAAGCCTATTG+TGG | + | chr2_3:52297-52316 | None:intergenic | 35.0% | |
| CTTGCATGTCCAAATAAAAC+AGG | + | chr2_3:52408-52427 | None:intergenic | 35.0% | |
| ATCATAAAAGAATTGTGGCC+GGG | + | chr2_3:52632-52651 | None:intergenic | 35.0% | |
| GAGGACATTGTAGAAGAAAA+TGG | + | chr2_3:52662-52681 | None:intergenic | 35.0% | |
| ! | TTTTCAGCAATAGAGACTTG+AGG | + | chr2_3:52691-52710 | None:intergenic | 35.0% |
| ! | GATTTAGGGGATTTGAAACT+TGG | - | chr2_3:52727-52746 | Msa0269290:intron | 35.0% |
| TGAATAACTAGTAGTGTGGA+GGG | + | chr2_3:52864-52883 | None:intergenic | 35.0% | |
| ! | AACTAAATTCTTTGAGGACC+AGG | + | chr2_3:52987-53006 | None:intergenic | 35.0% |
| ! | CATTTTGTTGATCTTGAGCA+AGG | + | chr2_3:53137-53156 | None:intergenic | 35.0% |
| CTTGCTCAAGATCAACAAAA+TGG | - | chr2_3:53135-53154 | Msa0269290:intron | 35.0% | |
| TGAAACCTCTAATCATGTCT+GGG | - | chr2_3:53201-53220 | Msa0269290:intron | 35.0% | |
| GGTGCCTACATTATAAGTAA+TGG | + | chr2_3:53667-53686 | None:intergenic | 35.0% | |
| GTAGTTTCATCTTCAAGCAA+GGG | + | chr2_3:53688-53707 | None:intergenic | 35.0% | |
| TGTAGTTTCATCTTCAAGCA+AGG | + | chr2_3:53689-53708 | None:intergenic | 35.0% | |
| GAAACTACAGATGACAATGA+TGG | - | chr2_3:53700-53719 | Msa0269290:intron | 35.0% | |
| ! | ACAGATGACAATGATGGAAT+TGG | - | chr2_3:53706-53725 | Msa0269290:intron | 35.0% |
| GTGAAATTAAGAAATGGTCC+AGG | - | chr2_3:53775-53794 | Msa0269290:intron | 35.0% | |
| !! | CACTTTAAAATCTACACGAG+AGG | - | chr2_3:53842-53861 | Msa0269290:intron | 35.0% |
| ATGCTAGTAACACACTCTTA+TGG | - | chr2_3:53866-53885 | Msa0269290:intron | 35.0% | |
| ! | CACTCTTATGGACATTCTTT+TGG | - | chr2_3:53878-53897 | Msa0269290:intron | 35.0% |
| ! | AATACTAGCAAAGGTACAGT+AGG | + | chr2_3:54079-54098 | None:intergenic | 35.0% |
| !! | TTGTTAGCTTTATGTAAGCC+TGG | - | chr2_3:54618-54637 | Msa0269290:CDS | 35.0% |
| !!! | TGTCGTTGATGACATCATTT+TGG | - | chr2_3:54654-54673 | Msa0269290:CDS | 35.0% |
| TAATGGTCAAGTTCAAGTGA+AGG | + | chr2_3:54741-54760 | None:intergenic | 35.0% | |
| CTTGCCCTAAAAGTCATTAA+TGG | + | chr2_3:54758-54777 | None:intergenic | 35.0% | |
| ATGAGCAACAATCTTCAATC+TGG | + | chr2_3:54789-54808 | None:intergenic | 35.0% | |
| CAAGCTCAAATAGAGAAAGT+TGG | - | chr2_3:54812-54831 | Msa0269290:intron | 35.0% | |
| AGCTCAAATAGAGAAAGTTG+GGG | - | chr2_3:54814-54833 | Msa0269290:intron | 35.0% | |
| TTGAGTTTCTACAAAGGGTA+AGG | + | chr2_3:54977-54996 | None:intergenic | 35.0% | |
| TTACCCTTTGTAGAAACTCA+AGG | - | chr2_3:54976-54995 | Msa0269290:intron | 35.0% | |
| TCTCCTTGAGTTTCTACAAA+GGG | + | chr2_3:54982-55001 | None:intergenic | 35.0% | |
| TTCTCCTTGAGTTTCTACAA+AGG | + | chr2_3:54983-55002 | None:intergenic | 35.0% | |
| AACCTACTTAAGTGAGTTAG+AGG | - | chr2_3:55136-55155 | Msa0269290:intron | 35.0% | |
| !! | GTTTTGGACCTAAATTTGGT+TGG | + | chr2_3:55202-55221 | None:intergenic | 35.0% |
| GTCAATATTACCTATTCCCT+TGG | + | chr2_3:55253-55272 | None:intergenic | 35.0% | |
| GGAATAGGTAATATTGACCA+AGG | - | chr2_3:55255-55274 | Msa0269290:intron | 35.0% | |
| AATATTGACCAAGGGTAAGA+TGG | - | chr2_3:55264-55283 | Msa0269290:intron | 35.0% | |
| TCAATTTACCATCTTACCCT+TGG | + | chr2_3:55275-55294 | None:intergenic | 35.0% | |
| GCTATAAATAGGAGATAGCA+AGG | - | chr2_3:55302-55321 | Msa0269290:intron | 35.0% | |
| TACTGAAGATGGAAGATCAA+CGG | - | chr2_3:55501-55520 | Msa0269290:intron | 35.0% | |
| !! | TAACGCCTCATTTTTAGAGA+GGG | + | chr2_3:55717-55736 | None:intergenic | 35.0% |
| !! | ATAACGCCTCATTTTTAGAG+AGG | + | chr2_3:55718-55737 | None:intergenic | 35.0% |
| AGAACCCTATATAAACTAGC+AGG | + | chr2_3:55787-55806 | None:intergenic | 35.0% | |
| TTCTCTTTCATACTTCGCAA+AGG | + | chr2_3:55888-55907 | None:intergenic | 35.0% | |
| TTCTCAAATCTGTCACTCTT+TGG | + | chr2_3:55993-56012 | None:intergenic | 35.0% | |
| !! | AGATGACTTGTTTCTTCGAT+GGG | + | chr2_3:56066-56085 | None:intergenic | 35.0% |
| !! | AAGATGACTTGTTTCTTCGA+TGG | + | chr2_3:56067-56086 | None:intergenic | 35.0% |
| !! | GCCAAATATTGGTTTCTGAT+TGG | - | chr2_3:56218-56237 | Msa0269290:five_prime_UTR | 35.0% |
| GCCAATCAGAAACCAATATT+TGG | + | chr2_3:56222-56241 | None:intergenic | 35.0% | |
| ! | GAGAAGAAGTATGGTTAGAG+AGG | + | chr2_3:48222-48241 | None:intergenic | 40.0% |
| CTTCTTCTCAGCTTATTTGG+TGG | - | chr2_3:48233-48252 | Msa0269290:three_prime_UTR | 40.0% | |
| !! | ACTTTTAAGGGAACGCCATT+TGG | - | chr2_3:48502-48521 | Msa0269290:CDS | 40.0% |
| ATTCATTTCATGACGCCAAG+TGG | - | chr2_3:48715-48734 | Msa0269290:intron | 40.0% | |
| TACTGTGCTCAAACTGAACA+TGG | - | chr2_3:49195-49214 | Msa0269290:intron | 40.0% | |
| GACTTGAGAAATGGATGTTG+AGG | + | chr2_3:49387-49406 | None:intergenic | 40.0% | |
| ! | TTTTCCCACAGATACTGATC+CGG | + | chr2_3:49495-49514 | None:intergenic | 40.0% |
| GAAAAGGAATTCTCTCTTGC+TGG | - | chr2_3:49510-49529 | Msa0269290:CDS | 40.0% | |
| GCAGTACATACGCAAACAAT+TGG | + | chr2_3:49636-49655 | None:intergenic | 40.0% | |
| !! | CAAGGAAGAGAAGTATCTTC+AGG | + | chr2_3:49744-49763 | None:intergenic | 40.0% |
| GTAACACATACCTGTTTCCA+TGG | + | chr2_3:49779-49798 | None:intergenic | 40.0% | |
| ! | ACTTTTATGGCCACTGCTAT+TGG | - | chr2_3:49797-49816 | Msa0269290:intron | 40.0% |
| ! | GTTTTTACCCTTGACTTCTC+GGG | - | chr2_3:49982-50001 | Msa0269290:intron | 40.0% |
| ! | TTTTTACCCTTGACTTCTCG+GGG | - | chr2_3:49983-50002 | Msa0269290:intron | 40.0% |
| ! | GTTTTTACCCTTGTCTTCTC+GGG | - | chr2_3:50108-50127 | Msa0269290:intron | 40.0% |
| ! | TTTTTACCCTTGTCTTCTCG+GGG | - | chr2_3:50109-50128 | Msa0269290:intron | 40.0% |
| CACACAAAGGAATGGTCAAA+AGG | + | chr2_3:50321-50340 | None:intergenic | 40.0% | |
| ! | CTTTTGACCATTCCTTTGTG+TGG | - | chr2_3:50319-50338 | Msa0269290:intron | 40.0% |
| CTTTCTACCACACAAAGGAA+TGG | + | chr2_3:50329-50348 | None:intergenic | 40.0% | |
| TATCCCGTATAGGTTTATGG+GGG | - | chr2_3:50394-50413 | Msa0269290:intron | 40.0% | |
| CCAAAACTTATCCCACTAAG+TGG | + | chr2_3:50557-50576 | None:intergenic | 40.0% | |
| ! | CCACTTAGTGGGATAAGTTT+TGG | - | chr2_3:50554-50573 | Msa0269290:intron | 40.0% |
| !! | CTTAGTGGGATAAGTTTTGG+TGG | - | chr2_3:50557-50576 | Msa0269290:intron | 40.0% |
| CCCTTGACAGAAAACTTTAG+TGG | + | chr2_3:50703-50722 | None:intergenic | 40.0% | |
| TTTCTCTCCATGCATCTTTG+TGG | - | chr2_3:50738-50757 | Msa0269290:intron | 40.0% | |
| ! | GTTTTGTCCACAAAGATGCA+TGG | + | chr2_3:50748-50767 | None:intergenic | 40.0% |
| CTTTGTGGACAAAACTGTTG+AGG | - | chr2_3:50753-50772 | Msa0269290:intron | 40.0% | |
| ! | GTGGGATTTAGCCTTCTTTA+TGG | - | chr2_3:51013-51032 | Msa0269290:intron | 40.0% |
| ! | TAATCTCATGATGGAGCTTG+TGG | - | chr2_3:51093-51112 | Msa0269290:intron | 40.0% |
| TAAAGGGAGTTGGCAATACT+TGG | + | chr2_3:51201-51220 | None:intergenic | 40.0% | |
| CATAAGTTGTTGCTGGAATC+TGG | - | chr2_3:51305-51324 | Msa0269290:intron | 40.0% | |
| ! | TATTCTAGCCTCTAGCTTGT+AGG | - | chr2_3:51340-51359 | Msa0269290:intron | 40.0% |
| !! | TGTTTTTAAGGGGTTGTCAC+AGG | - | chr2_3:51610-51629 | Msa0269290:intron | 40.0% |
| GTAGTTGAAATTCCCAGCTT+TGG | + | chr2_3:51709-51728 | None:intergenic | 40.0% | |
| !!! | CTGGTTACTTTTGAGCAACA+TGG | - | chr2_3:51993-52012 | Msa0269290:intron | 40.0% |
| TCTCATCTCAGAATCCTATG+CGG | - | chr2_3:52461-52480 | Msa0269290:intron | 40.0% | |
| GTTAAATACCTCATCCACAC+CGG | + | chr2_3:52755-52774 | None:intergenic | 40.0% | |
| CTGAATAACTAGTAGTGTGG+AGG | + | chr2_3:52865-52884 | None:intergenic | 40.0% | |
| GCACTGAATAACTAGTAGTG+TGG | + | chr2_3:52868-52887 | None:intergenic | 40.0% | |
| TAGAGGTTTCAGGCAAGTTA+AGG | + | chr2_3:53192-53211 | None:intergenic | 40.0% | |
| CAGACATGATTAGAGGTTTC+AGG | + | chr2_3:53202-53221 | None:intergenic | 40.0% | |
| CTGAAACCTCTAATCATGTC+TGG | - | chr2_3:53200-53219 | Msa0269290:intron | 40.0% | |
| GAAACCTCTAATCATGTCTG+GGG | - | chr2_3:53202-53221 | Msa0269290:intron | 40.0% | |
| AAAGATAACCTGCACACTTG+CGG | + | chr2_3:53743-53762 | None:intergenic | 40.0% | |
| TCAATGTGTAGGAGGAATGT+TGG | + | chr2_3:54028-54047 | None:intergenic | 40.0% | |
| CATTCCTCCTACACATTGAA+CGG | - | chr2_3:54029-54048 | Msa0269290:intron | 40.0% | |
| !! | AAAAGCACCGTTCAATGTGT+AGG | + | chr2_3:54039-54058 | None:intergenic | 40.0% |
| GATAGACAAAGTTCGAAGAG+TGG | - | chr2_3:54211-54230 | Msa0269290:intron | 40.0% | |
| AACAATTATGTGCGCCTACA+AGG | - | chr2_3:54373-54392 | Msa0269290:CDS | 40.0% | |
| ATCAACGACATAAGAAAGCC+AGG | + | chr2_3:54644-54663 | None:intergenic | 40.0% | |
| !!! | GACTTTTAGGGCAAGCTAAA+TGG | - | chr2_3:54763-54782 | Msa0269290:intron | 40.0% |
| AGGTGAAGATTGGGAAAATG+TGG | + | chr2_3:54957-54976 | None:intergenic | 40.0% | |
| CAAAGGGTAAGGTGAAGATT+GGG | + | chr2_3:54966-54985 | None:intergenic | 40.0% | |
| ACAAAGGGTAAGGTGAAGAT+TGG | + | chr2_3:54967-54986 | None:intergenic | 40.0% | |
| CTCCTCTAACTCACTTAAGT+AGG | + | chr2_3:55141-55160 | None:intergenic | 40.0% | |
| AAGCAAGGCCAACCAAATTT+AGG | - | chr2_3:55191-55210 | Msa0269290:intron | 40.0% | |
| AAAAAGGACACCAAGGGAAT+AGG | - | chr2_3:55240-55259 | Msa0269290:intron | 40.0% | |
| AAGCTTCTTCACACTTGGAA+TGG | + | chr2_3:55478-55497 | None:intergenic | 40.0% | |
| AGATGTAGAAATTGGGGGAA+AGG | - | chr2_3:55546-55565 | Msa0269290:intron | 40.0% | |
| ! | AAGCTCCCTCTCTAAAAATG+AGG | - | chr2_3:55709-55728 | Msa0269290:five_prime_UTR | 40.0% |
| GTCATGTCAGAATACTGTGA+AGG | - | chr2_3:55851-55870 | Msa0269290:intron | 40.0% | |
| AGATGAAAAGAAGCCGAAGA+AGG | - | chr2_3:55926-55945 | Msa0269290:intron | 40.0% | |
| GATGAAAAGAAGCCGAAGAA+GGG | - | chr2_3:55927-55946 | Msa0269290:intron | 40.0% | |
| ! | TTGCGGCTTTGTCTTCTTAA+GGG | - | chr2_3:56035-56054 | Msa0269290:intron | 40.0% |
| ! | CTTCTCAGCTTATTTGGTGG+TGG | - | chr2_3:48236-48255 | Msa0269290:three_prime_UTR | 45.0% |
| TGGTAGCTTAGCTCAGACTT+TGG | - | chr2_3:48259-48278 | Msa0269290:three_prime_UTR | 45.0% | |
| GGCTTGGGAACAGACAAAAA+AGG | + | chr2_3:48353-48372 | None:intergenic | 45.0% | |
| ATAACCCGGATCAGTATCTG+TGG | - | chr2_3:49487-49506 | Msa0269290:CDS | 45.0% | |
| TAACCCGGATCAGTATCTGT+GGG | - | chr2_3:49488-49507 | Msa0269290:CDS | 45.0% | |
| TTTCCCACAGATACTGATCC+GGG | + | chr2_3:49494-49513 | None:intergenic | 45.0% | |
| GGATCAGTATCTGTGGGAAA+AGG | - | chr2_3:49494-49513 | Msa0269290:CDS | 45.0% | |
| TTGCTGGTAGAACCTACCAA+AGG | - | chr2_3:49526-49545 | Msa0269290:CDS | 45.0% | |
| CTCTAAATCCTGCCTTTGGT+AGG | + | chr2_3:49541-49560 | None:intergenic | 45.0% | |
| CTACCAAAGGCAGGATTTAG+AGG | - | chr2_3:49539-49558 | Msa0269290:CDS | 45.0% | |
| TTGCCTCTAAATCCTGCCTT+TGG | + | chr2_3:49545-49564 | None:intergenic | 45.0% | |
| ACACTTCAAGGTATAGCCTC+TGG | + | chr2_3:49697-49716 | None:intergenic | 45.0% | |
| GAGAATTACAGCCGCTTCAT+TGG | + | chr2_3:49944-49963 | None:intergenic | 45.0% | |
| AACTTACTTCGTGCCAACCA+AGG | + | chr2_3:50038-50057 | None:intergenic | 45.0% | |
| !! | AGATTGTGGTGTCGCATTTG+AGG | - | chr2_3:50358-50377 | Msa0269290:intron | 45.0% |
| ACCTCCCCCATAAACCTATA+CGG | + | chr2_3:50401-50420 | None:intergenic | 45.0% | |
| TCCAGCAATAGAAGGGTCTT+CGG | + | chr2_3:51041-51060 | None:intergenic | 45.0% | |
| AGACCCTTCTATTGCTGGAA+TGG | - | chr2_3:51042-51061 | Msa0269290:intron | 45.0% | |
| AATCCGGCTTCCAAAGTTCA+CGG | - | chr2_3:51126-51145 | Msa0269290:intron | 45.0% | |
| !! | AGAGAGAGTACCGTGAACTT+TGG | + | chr2_3:51139-51158 | None:intergenic | 45.0% |
| CAATACTTGGCATCCACACA+GGG | + | chr2_3:51188-51207 | None:intergenic | 45.0% | |
| TTCAGCTCGACTGTCCAAAT+TGG | - | chr2_3:51813-51832 | Msa0269290:intron | 45.0% | |
| GAGATGAGATCAGAGTGATG+CGG | + | chr2_3:52450-52469 | None:intergenic | 45.0% | |
| ATAAAAGAATTGTGGCCGGG+AGG | + | chr2_3:52629-52648 | None:intergenic | 45.0% | |
| CAATAGAGACTTGAGGAGGA+CGG | + | chr2_3:52684-52703 | None:intergenic | 45.0% | |
| TCAGCAATAGAGACTTGAGG+AGG | + | chr2_3:52688-52707 | None:intergenic | 45.0% | |
| ! | GGGGATTTGAAACTTGGTTC+CGG | - | chr2_3:52733-52752 | Msa0269290:intron | 45.0% |
| ! | TTTGAAACTTGGTTCCGGTG+TGG | - | chr2_3:52738-52757 | Msa0269290:intron | 45.0% |
| GTTTCAGGCAAGTTAAGGCT+AGG | + | chr2_3:53187-53206 | None:intergenic | 45.0% | |
| ACGAGATTCTCTCTAGTCTG+CGG | - | chr2_3:53476-53495 | Msa0269290:intron | 45.0% | |
| AAAGTTCGAAGAGTGGCTAG+TGG | - | chr2_3:54218-54237 | Msa0269290:intron | 45.0% | |
| CAAATAGAGAAAGTTGGGGC+AGG | - | chr2_3:54818-54837 | Msa0269290:intron | 45.0% | |
| TGCTGATGATAAGCTCTCTC+AGG | - | chr2_3:54888-54907 | Msa0269290:CDS | 45.0% | |
| ! | ATGGTGATTTGTGGCGTGAA+GGG | + | chr2_3:55380-55399 | None:intergenic | 45.0% |
| ! | AATGGTGATTTGTGGCGTGA+AGG | + | chr2_3:55381-55400 | None:intergenic | 45.0% |
| TGAAGATGGAAGATCAACGG+AGG | - | chr2_3:55504-55523 | Msa0269290:intron | 45.0% | |
| ATGGAAGATCAACGGAGGTT+AGG | - | chr2_3:55509-55528 | Msa0269290:intron | 45.0% | |
| TGGAAGATCAACGGAGGTTA+GGG | - | chr2_3:55510-55529 | Msa0269290:intron | 45.0% | |
| GAGTGACAGATTTGAGAAGC+TGG | - | chr2_3:55995-56014 | Msa0269290:intron | 45.0% | |
| TGACAGATTTGAGAAGCTGG+AGG | - | chr2_3:55998-56017 | Msa0269290:intron | 45.0% | |
| ! | CTTGCGGCTTTGTCTTCTTA+AGG | - | chr2_3:56034-56053 | Msa0269290:intron | 45.0% |
| !!! | TTTTTAATCATTTTATAAAT+CGG | - | chr2_3:50802-50821 | Msa0269290:CDS | 5.0% |
| !!! | ATAAAGATTTTTTTTTTTTT+TGG | - | chr2_3:51737-51756 | Msa0269290:CDS | 5.0% |
| !!! | TAAAGATTTTTTTTTTTTTT+GGG | - | chr2_3:51738-51757 | Msa0269290:CDS | 5.0% |
| AGAGGGAAAGAAAGGACAGC+TGG | - | chr2_3:48098-48117 | Msa0269290:three_prime_UTR | 50.0% | |
| AAAGAAAGGACAGCTGGCTG+AGG | - | chr2_3:48104-48123 | Msa0269290:three_prime_UTR | 50.0% | |
| !! | GCTGAGGTGTTTGGTGTTCT+TGG | - | chr2_3:48120-48139 | Msa0269290:three_prime_UTR | 50.0% |
| !! | CTCAGCTTATTTGGTGGTGG+TGG | - | chr2_3:48239-48258 | Msa0269290:three_prime_UTR | 50.0% |
| ATTTCGTTATTCGCCCTCCC+AGG | - | chr2_3:48775-48794 | Msa0269290:intron | 50.0% | |
| ACTTTGCCACATACACAGGG+CGG | - | chr2_3:49461-49480 | Msa0269290:intron | 50.0% | |
| TATAGTCCGCCCTGTGTATG+TGG | + | chr2_3:49470-49489 | None:intergenic | 50.0% | |
| TGGTAGAACCTACCAAAGGC+AGG | - | chr2_3:49530-49549 | Msa0269290:CDS | 50.0% | |
| TAGGGCAGATGCCAATGAAG+CGG | - | chr2_3:49930-49949 | Msa0269290:intron | 50.0% | |
| GATGGAGACTATGTCAGCCT+TGG | - | chr2_3:50018-50037 | Msa0269290:intron | 50.0% | |
| GAGACTATGTCAGCCTTGGT+TGG | - | chr2_3:50022-50041 | Msa0269290:intron | 50.0% | |
| CCTCCCCCATAAACCTATAC+GGG | + | chr2_3:50400-50419 | None:intergenic | 50.0% | |
| AGGTTTATGGGGGAGGTCAA+TGG | - | chr2_3:50404-50423 | Msa0269290:intron | 50.0% | |
| GGTTTATGGGGGAGGTCAAT+GGG | - | chr2_3:50405-50424 | Msa0269290:intron | 50.0% | |
| ATGCAACCAACCCCACTTAG+TGG | - | chr2_3:50542-50561 | Msa0269290:intron | 50.0% | |
| TGCAACCAACCCCACTTAGT+GGG | - | chr2_3:50543-50562 | Msa0269290:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | + | chr2_3:50551-50570 | None:intergenic | 50.0% | |
| GGTCTTCGGCTCCATAAAGA+AGG | + | chr2_3:51027-51046 | None:intergenic | 50.0% | |
| ! | GTACCGTGAACTTTGGAAGC+CGG | + | chr2_3:51132-51151 | None:intergenic | 50.0% |
| GCAATACTTGGCATCCACAC+AGG | + | chr2_3:51189-51208 | None:intergenic | 50.0% | |
| ! | AGCCTCTAGCTTGTAGGACT+TGG | - | chr2_3:51346-51365 | Msa0269290:intron | 50.0% |
| CACCAAGTCCTACAAGCTAG+AGG | + | chr2_3:51351-51370 | None:intergenic | 50.0% | |
| TGGCTGTACAATACATGCGG+CGG | - | chr2_3:52117-52136 | Msa0269290:intron | 50.0% | |
| ATGGCGACCATAATTCCTCC+CGG | - | chr2_3:52611-52630 | Msa0269290:intron | 50.0% | |
| ATTGTGGCCGGGAGGAATTA+TGG | + | chr2_3:52621-52640 | None:intergenic | 50.0% | |
| AGCTGCACTTATGAGAAGCC+TGG | - | chr2_3:52966-52985 | Msa0269290:intron | 50.0% | |
| ACCTCTAATCATGTCTGGGG+CGG | - | chr2_3:53205-53224 | Msa0269290:intron | 50.0% | |
| CTCCCCTGACTGATGTAGTA+GGG | - | chr2_3:53587-53606 | Msa0269290:intron | 50.0% | |
| CACCCTACTACATCAGTCAG+GGG | + | chr2_3:53592-53611 | None:intergenic | 50.0% | |
| GCACCCTACTACATCAGTCA+GGG | + | chr2_3:53593-53612 | None:intergenic | 50.0% | |
| AGCACCGTTCAATGTGTAGG+AGG | + | chr2_3:54036-54055 | None:intergenic | 50.0% | |
| ! | AGCTTTATGTAAGCCTGGCC+TGG | - | chr2_3:54623-54642 | Msa0269290:CDS | 50.0% |
| TGGGGCAGGTGTTCTTCATT+AGG | - | chr2_3:54832-54851 | Msa0269290:CDS | 50.0% | |
| GGCAGGTGTTCTTCATTAGG+AGG | - | chr2_3:54835-54854 | Msa0269290:CDS | 50.0% | |
| ! | TGGTGATTTGTGGCGTGAAG+GGG | + | chr2_3:55379-55398 | None:intergenic | 50.0% |
| !! | ACACAGGGCGGACTATAACC+CGG | - | chr2_3:49473-49492 | Msa0269290:intron | 55.0% |
| GTGCAGCTCAAGAATGCCAG+AGG | - | chr2_3:49678-49697 | Msa0269290:intron | 55.0% | |
| TCGGGGTCAGGCTTATCTGA+TGG | - | chr2_3:50000-50019 | Msa0269290:intron | 55.0% | |
| TCGGGGTCAGGCTTATCTGA+TGG | - | chr2_3:50000-50019 | Msa0269290:intron | 55.0% | |
| CCCGTATAGGTTTATGGGGG+AGG | - | chr2_3:50397-50416 | Msa0269290:intron | 55.0% | |
| GGTCAATGGGCGCAGTTACT+AGG | - | chr2_3:50418-50437 | Msa0269290:intron | 55.0% | |
| GCCGAAGACCCTTCTATTGC+TGG | - | chr2_3:51037-51056 | Msa0269290:intron | 55.0% | |
| TCTGTGCGTGTATCCCTGTG+TGG | - | chr2_3:51172-51191 | Msa0269290:intron | 55.0% | |
| GGCTGTACAATACATGCGGC+GGG | - | chr2_3:52118-52137 | Msa0269290:intron | 55.0% | |
| !! | GCGGCGGGTTATTGAGAAGA+AGG | - | chr2_3:52133-52152 | Msa0269290:intron | 55.0% |
| TAGAGACTTGAGGAGGACGG+AGG | + | chr2_3:52681-52700 | None:intergenic | 55.0% | |
| ACTTGGTTCCGGTGTGGATG+AGG | - | chr2_3:52744-52763 | Msa0269290:intron | 55.0% | |
| TCCGCCCCAGACATGATTAG+AGG | + | chr2_3:53209-53228 | None:intergenic | 55.0% | |
| GCTCCCCTGACTGATGTAGT+AGG | - | chr2_3:53586-53605 | Msa0269290:intron | 55.0% | |
| GGCACCCTACTACATCAGTC+AGG | + | chr2_3:53594-53613 | None:intergenic | 55.0% | |
| GCACACTTGCGGCTTCATCA+GGG | + | chr2_3:53732-53751 | None:intergenic | 55.0% | |
| TGCACACTTGCGGCTTCATC+AGG | + | chr2_3:53733-53752 | None:intergenic | 55.0% | |
| TGATGAAGCCGCAAGTGTGC+AGG | - | chr2_3:53732-53751 | Msa0269290:intron | 55.0% | |
| CGACATAAGAAAGCCAGGCC+AGG | + | chr2_3:54639-54658 | None:intergenic | 55.0% | |
| GCGTGAAGGGGTGAAGTTTG+TGG | + | chr2_3:55367-55386 | None:intergenic | 55.0% | |
| ! | GGACAGCTGGCTGAGGTGTT+TGG | - | chr2_3:48111-48130 | Msa0269290:three_prime_UTR | 60.0% |
| ACCCTTGACTTCTCGGGGTC+AGG | - | chr2_3:49988-50007 | Msa0269290:intron | 60.0% | |
| GCCTGACCCCGAGAAGTCAA+GGG | + | chr2_3:49992-50011 | None:intergenic | 60.0% | |
| AGCCTGACCCCGAGAAGTCA+AGG | + | chr2_3:49993-50012 | None:intergenic | 60.0% | |
| ACCCTTGTCTTCTCGGGGTC+AGG | - | chr2_3:50114-50133 | Msa0269290:intron | 60.0% | |
| GCCTGACCCCGAGAAGACAA+GGG | + | chr2_3:50118-50137 | None:intergenic | 60.0% | |
| AGCCTGACCCCGAGAAGACA+AGG | + | chr2_3:50119-50138 | None:intergenic | 60.0% | |
| AGGCTCTCAGCAGACGCTTG+CGG | - | chr2_3:56018-56037 | Msa0269290:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48070 | 56318 | 48070 | ID=Msa0269290;Name=Msa0269290 |
| chr2_3 | mRNA | 48070 | 56318 | 48070 | ID=Msa0269290-mRNA-1;Parent=Msa0269290;Name=Msa0269290-mRNA-1;_AED=0.21;_eAED=0.21;_QI=419|0.92|0.92|1|0.92|0.92|14|230|501 |
| chr2_3 | exon | 48070 | 48527 | 48070 | ID=Msa0269290-mRNA-1:exon:53;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 49479 | 49616 | 49479 | ID=Msa0269290-mRNA-1:exon:52;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 50635 | 50706 | 50635 | ID=Msa0269290-mRNA-1:exon:51;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 50788 | 50922 | 50788 | ID=Msa0269290-mRNA-1:exon:50;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 51623 | 51802 | 51623 | ID=Msa0269290-mRNA-1:exon:49;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 51906 | 52004 | 51906 | ID=Msa0269290-mRNA-1:exon:48;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 52198 | 52278 | 52198 | ID=Msa0269290-mRNA-1:exon:47;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 53241 | 53364 | 53241 | ID=Msa0269290-mRNA-1:exon:46;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 53949 | 54043 | 53949 | ID=Msa0269290-mRNA-1:exon:45;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 54338 | 54464 | 54338 | ID=Msa0269290-mRNA-1:exon:44;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 54601 | 54704 | 54601 | ID=Msa0269290-mRNA-1:exon:43;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 54828 | 54909 | 54828 | ID=Msa0269290-mRNA-1:exon:42;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 55592 | 55811 | 55592 | ID=Msa0269290-mRNA-1:exon:41;Parent=Msa0269290-mRNA-1 |
| chr2_3 | exon | 56079 | 56318 | 56079 | ID=Msa0269290-mRNA-1:exon:40;Parent=Msa0269290-mRNA-1 |
| chr2_3 | five_prime_UTR | 56079 | 56318 | 56079 | ID=Msa0269290-mRNA-1:five_prime_utr;Parent=Msa0269290-mRNA-1 |
| chr2_3 | five_prime_UTR | 55633 | 55811 | 55633 | ID=Msa0269290-mRNA-1:five_prime_utr;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 55592 | 55632 | 55592 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 54828 | 54909 | 54828 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 54601 | 54704 | 54601 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 54338 | 54464 | 54338 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 53949 | 54043 | 53949 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 53241 | 53364 | 53241 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 52198 | 52278 | 52198 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 51906 | 52004 | 51906 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 51623 | 51802 | 51623 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 50788 | 50922 | 50788 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 50635 | 50706 | 50635 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 49479 | 49616 | 49479 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | CDS | 48300 | 48527 | 48300 | ID=Msa0269290-mRNA-1:cds;Parent=Msa0269290-mRNA-1 |
| chr2_3 | three_prime_UTR | 48070 | 48299 | 48070 | ID=Msa0269290-mRNA-1:three_prime_utr;Parent=Msa0269290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
