AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1267270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267270 MtrunA17_Chr4g0076631 99.402 502 2 1 1 501 1 502 0.0 1024
Msa1267270 MtrunA17_Chr2g0291031 68.263 501 119 5 1 501 1 461 0.0 638
Msa1267270 MtrunA17_Chr4g0065941 68.792 298 90 1 2 299 1 295 3.50e-154 442
Msa1267270 MtrunA17_Chr2g0287221 62.179 312 115 1 2 313 1 309 6.23e-146 429
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267270 AT4G17150.1 64.522 513 148 5 1 500 10 501 0.0 626
Msa1267270 AT4G17150.4 71.182 406 106 4 1 398 10 412 0.0 558
Msa1267270 AT4G17150.5 63.002 473 141 5 41 500 26 477 0.0 555
Msa1267270 AT4G17150.3 76.796 362 82 1 1 360 10 371 0.0 549
Msa1267270 AT4G17150.2 76.796 362 82 1 1 360 10 371 0.0 549
Msa1267270 AT4G14290.2 71.429 287 82 0 2 288 1 287 5.96e-158 459
Msa1267270 AT4G14290.1 71.429 287 82 0 2 288 1 287 8.94e-158 460
Msa1267270 AT3G23540.1 67.657 303 95 1 2 301 1 303 1.30e-155 455
Msa1267270 AT3G23540.3 69.091 275 82 1 30 301 2 276 1.66e-141 418
Msa1267270 AT4G14290.5 72.532 233 64 0 56 288 1 233 2.23e-127 380
Msa1267270 AT3G23540.2 67.500 160 49 1 145 301 1 160 3.40e-73 238
Msa1267270 AT4G14290.3 70.714 140 41 0 149 288 33 172 1.14e-67 224
Msa1267270 AT4G14290.4 70.803 137 40 0 152 288 1 137 3.82e-67 222

Find 151 sgRNAs with CRISPR-Local

Find 489 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAGGTGTTTGGTGTTCT+TGG 0.142159 8_2:-72417066 Msa1267270:five_prime_UTR
GTGGGATTTAGCCTTCTTTA+TGG 0.167652 8_2:-72414162 Msa1267270:intron
CTCGAGAAATATTATGATTT+AGG 0.172301 8_2:-72412462 Msa1267270:CDS
AAATATCCCGTATAGGTTTA+TGG 0.173583 8_2:-72414784 Msa1267270:CDS
TTTAGGAATTGCCAAATATT+TGG 0.181328 8_2:-72408869 Msa1267270:three_prime_UTR
TTCTCCCAATTAGGTTAAAA+TGG 0.185844 8_2:-72413077 Msa1267270:intron
ATACTTCTTCTCAGCTTATT+TGG 0.201453 8_2:-72416956 Msa1267270:five_prime_UTR
TTGCTAACAAGCCAAATATT+TGG 0.214997 8_2:+72408858 None:intergenic
CTTGCGGCTTTGTCTTCTTA+AGG 0.270780 8_2:-72409124 Msa1267270:CDS
GCCAATCAGAAACCAATATT+TGG 0.276128 8_2:+72408939 None:intergenic
TTCTCAAATCTGTCACTCTT+TGG 0.286897 8_2:+72409168 None:intergenic
TCACAACTCAAAAGTCAAAT+TGG 0.286923 8_2:+72416558 None:intergenic
TGCACACTTGCGGCTTCATC+AGG 0.294214 8_2:+72411440 None:intergenic
AGTTGTGAAGAAAGAGAGAT+TGG 0.297966 8_2:-72416543 Msa1267270:five_prime_UTR
TCGAGAAATATTATGATTTA+GGG 0.306533 8_2:-72412461 Msa1267270:CDS
GAGGACATTGTAGAAGAAAA+TGG 0.307349 8_2:+72412515 None:intergenic
TGGGGCAGGTGTTCTTCATT+AGG 0.330333 8_2:-72410338 Msa1267270:CDS
TTCTATTGCTGGAATGGTAT+TGG 0.336375 8_2:-72414127 Msa1267270:CDS
TTGCGGCTTTGTCTTCTTAA+GGG 0.349769 8_2:-72409123 Msa1267270:CDS
ACCCTTGACTTCTCGGGGTC+AGG 0.351572 8_2:-72415187 Msa1267270:CDS
GCCAAATATTGGTTTCTGAT+TGG 0.356584 8_2:-72408940 Msa1267270:three_prime_UTR
GAGAATTACAGCCGCTTCAT+TGG 0.360136 8_2:+72415234 None:intergenic
AATATCCCGTATAGGTTTAT+GGG 0.365038 8_2:-72414783 Msa1267270:CDS
AATACCATTCCAGCAATAGA+AGG 0.376973 8_2:+72414129 None:intergenic
GCCGAAGACCCTTCTATTGC+TGG 0.379355 8_2:-72414138 Msa1267270:CDS
AAGCTCAAATAGAGAAAGTT+GGG 0.381819 8_2:-72410357 Msa1267270:CDS
TTATATATTGCCATGGAAAC+AGG 0.382845 8_2:-72415409 Msa1267270:intron
ATTACAATTAGATTGACTAT+TGG 0.394016 8_2:+72409041 None:intergenic
AAATAAGCTGAGAAGAAGTA+TGG 0.398646 8_2:+72416958 None:intergenic
TATGAAATTGAACTGTGTTC+TGG 0.398736 8_2:-72413005 Msa1267270:intron
CGAAATGAAATGAAATGAAA+AGG 0.403582 8_2:+72416899 None:intergenic
CTACCAAAGGCAGGATTTAG+AGG 0.404625 8_2:-72415636 Msa1267270:intron
GAAAAGGAATTCTCTCTTGC+TGG 0.411836 8_2:-72415665 Msa1267270:CDS
GATTTAGGGGATTTGAAACT+TGG 0.415584 8_2:-72412447 Msa1267270:CDS
TGGTGTTCTTGGAATTGAAT+TGG 0.420124 8_2:-72417055 Msa1267270:five_prime_UTR
ACAGATGACAATGATGGAAT+TGG 0.425584 8_2:-72411464 Msa1267270:CDS
GGTCAATGGGCGCAGTTACT+AGG 0.428894 8_2:-72414757 Msa1267270:intron
TTGCCTCTAAATCCTGCCTT+TGG 0.430450 8_2:+72415633 None:intergenic
TTGTGGACGTTTATAAAATC+CGG 0.430844 8_2:-72414065 Msa1267270:CDS
GTATCTTCAGGAAAAGGAAA+AGG 0.432727 8_2:+72415446 None:intergenic
GGGGATTTGAAACTTGGTTC+CGG 0.432780 8_2:-72412441 Msa1267270:CDS
CTTGCATGTCCAAATAAAAC+AGG 0.434305 8_2:+72412769 None:intergenic
CTCAGCTTATTTGGTGGTGG+TGG 0.435731 8_2:-72416947 Msa1267270:five_prime_UTR
GGACAGCTGGCTGAGGTGTT+TGG 0.436350 8_2:-72417075 Msa1267270:five_prime_UTR
CTTCTCAGCTTATTTGGTGG+TGG 0.438281 8_2:-72416950 Msa1267270:five_prime_UTR
GAGTGACAGATTTGAGAAGC+TGG 0.441559 8_2:-72409163 Msa1267270:CDS
AGAGAGAGTACCGTGAACTT+TGG 0.446970 8_2:+72414039 None:intergenic
AGATGACTTGTTTCTTCGAT+GGG 0.453630 8_2:+72409095 None:intergenic
GAAATGAAATGAAATGAAAA+GGG 0.457732 8_2:+72416900 None:intergenic
AGAGAAGTATCTTCAGGAAA+AGG 0.459180 8_2:+72415440 None:intergenic
CTTCTTCTCAGCTTATTTGG+TGG 0.459744 8_2:-72416953 Msa1267270:five_prime_UTR
ATGAGCAACAATCTTCAATC+TGG 0.460440 8_2:+72410384 None:intergenic
GGCACCCTACTACATCAGTC+AGG 0.465060 8_2:+72411580 None:intergenic
AAGATGACTTGTTTCTTCGA+TGG 0.466764 8_2:+72409094 None:intergenic
CAAGGAAGAGAAGTATCTTC+AGG 0.469007 8_2:+72415434 None:intergenic
CAAGCTCAAATAGAGAAAGT+TGG 0.469326 8_2:-72410358 Msa1267270:CDS
GAGATAATGACTACACTTCA+AGG 0.474252 8_2:+72415469 None:intergenic
TTTCCCACAGATACTGATCC+GGG 0.477800 8_2:+72415684 None:intergenic
AAAACAGGAATGAATGTCTT+CGG 0.479091 8_2:+72412784 None:intergenic
TCCAGCAATAGAAGGGTCTT+CGG 0.485556 8_2:+72414137 None:intergenic
GAGATTATATAAGTTTGAAA+AGG 0.488604 8_2:+72414098 None:intergenic
AAAAGAATAAATTGATAAGA+GGG 0.488945 8_2:-72417105 Msa1267270:five_prime_UTR
ATTGTGGCCGGGAGGAATTA+TGG 0.491620 8_2:+72412556 None:intergenic
TGATGAAGCCGCAAGTGTGC+AGG 0.493167 8_2:-72411438 Msa1267270:intron
GAGAAGAAGTATGGTTAGAG+AGG 0.493381 8_2:+72416967 None:intergenic
AAAACACAAATTTCGTGTGT+AGG 0.494347 8_2:-72409012 Msa1267270:three_prime_UTR
AACAAACAAATATCCCGTAT+AGG 0.496030 8_2:-72414791 Msa1267270:CDS
TAATGATAACAGCGAAATGA+AGG 0.502100 8_2:+72408917 None:intergenic
CTCTAAATCCTGCCTTTGGT+AGG 0.502347 8_2:+72415637 None:intergenic
TGCTGATGATAAGCTCTCTC+AGG 0.502510 8_2:-72410282 Msa1267270:intron
AATTGATAAGAGGGAAAGAA+AGG 0.506532 8_2:-72417096 Msa1267270:five_prime_UTR
TGGTAGCTTAGCTCAGACTT+TGG 0.510902 8_2:-72416927 Msa1267270:five_prime_UTR
TTAAATGATGCAGTGGATGT+AGG 0.518787 8_2:-72415264 Msa1267270:intron
AGATGAAAAGAAGCCGAAGA+AGG 0.519297 8_2:-72409232 Msa1267270:CDS
AGACCCTTCTATTGCTGGAA+TGG 0.522988 8_2:-72414133 Msa1267270:CDS
GAAACTACAGATGACAATGA+TGG 0.526697 8_2:-72411470 Msa1267270:CDS
GGATCAGTATCTGTGGGAAA+AGG 0.529501 8_2:-72415681 Msa1267270:CDS
ATTTCGTTATTCGCCCTCCC+AGG 0.531333 8_2:-72416399 Msa1267270:intron
ATCATAAAAGAATTGTGGCC+GGG 0.532049 8_2:+72412545 None:intergenic
AGATTGTGGTGTCGCATTTG+AGG 0.532944 8_2:-72414817 Msa1267270:CDS
AAGAATAATAATACCTGGGA+GGG 0.533025 8_2:+72416386 None:intergenic
TCGGGGTCAGGCTTATCTGA+TGG 0.533663 8_2:-72415175 Msa1267270:CDS
GCGGCGGGTTATTGAGAAGA+AGG 0.534978 8_2:-72413041 Msa1267270:CDS
TATCTTCAGGAAAAGGAAAA+GGG 0.536605 8_2:+72415447 None:intergenic
GGCAGGTGTTCTTCATTAGG+AGG 0.539678 8_2:-72410335 Msa1267270:CDS
CCTTGTGTTATATATTGCCA+TGG 0.540136 8_2:-72415416 Msa1267270:CDS
GATGAAAAGAAGCCGAAGAA+GGG 0.543208 8_2:-72409231 Msa1267270:CDS
GTATCTATCTTATAGCCACT+TGG 0.543355 8_2:+72416444 None:intergenic
TGTAGTTTCATCTTCAAGCA+AGG 0.545400 8_2:+72411484 None:intergenic
GTACCGTGAACTTTGGAAGC+CGG 0.545459 8_2:+72414046 None:intergenic
AGCCTGACCCCGAGAAGTCA+AGG 0.546559 8_2:+72415185 None:intergenic
AAACTTATATAATCTCATGA+TGG 0.546998 8_2:-72414091 Msa1267270:CDS
TAATCTCATGATGGAGCTTG+TGG 0.547533 8_2:-72414082 Msa1267270:CDS
ACTTGGTTCCGGTGTGGATG+AGG 0.547607 8_2:-72412430 Msa1267270:intron
TTCTCTTTCATACTTCGCAA+AGG 0.549432 8_2:+72409273 None:intergenic
AATCATAAAAGAATTGTGGC+CGG 0.549501 8_2:+72412544 None:intergenic
GTAACACATACCTGTTTCCA+TGG 0.551077 8_2:+72415399 None:intergenic
GTATTAAATTAATACCGCAT+AGG 0.557960 8_2:+72412699 None:intergenic
AGGCTCTCAGCAGACGCTTG+CGG 0.561762 8_2:-72409140 Msa1267270:CDS
GGCTGTACAATACATGCGGC+GGG 0.564086 8_2:-72413056 Msa1267270:CDS
AGAGGGAAAGAAAGGACAGC+TGG 0.565313 8_2:-72417088 Msa1267270:five_prime_UTR
TATGATATGATATACAAAAG+AGG 0.565995 8_2:+72409069 None:intergenic
ATATCCCGTATAGGTTTATG+GGG 0.567406 8_2:-72414782 Msa1267270:CDS
TAAATGATGCAGTGGATGTA+GGG 0.568274 8_2:-72415263 Msa1267270:intron
CAAATAGAGAAAGTTGGGGC+AGG 0.573325 8_2:-72410352 Msa1267270:CDS
ACTGAATCATAAAAGAATTG+TGG 0.574633 8_2:+72412540 None:intergenic
ATGGCGACCATAATTCCTCC+CGG 0.574950 8_2:-72412563 Msa1267270:CDS
ACACTTCAAGGTATAGCCTC+TGG 0.577166 8_2:+72415481 None:intergenic
GTAGTTTCATCTTCAAGCAA+GGG 0.578611 8_2:+72411485 None:intergenic
GGTCTTCGGCTCCATAAAGA+AGG 0.579635 8_2:+72414151 None:intergenic
AAAGAAAGGACAGCTGGCTG+AGG 0.581463 8_2:-72417082 Msa1267270:five_prime_UTR
GATGGAGACTATGTCAGCCT+TGG 0.581558 8_2:-72415157 Msa1267270:CDS
GCACCCTACTACATCAGTCA+GGG 0.585755 8_2:+72411581 None:intergenic
ATGAAATGAAATGAAAAGGG+TGG 0.589383 8_2:+72416903 None:intergenic
GAAAGATGATCTGAAGATTG+TGG 0.598855 8_2:-72414831 Msa1267270:CDS
AATCCGGCTTCCAAAGTTCA+CGG 0.601063 8_2:-72414049 Msa1267270:intron
TGGTAGAACCTACCAAAGGC+AGG 0.601644 8_2:-72415645 Msa1267270:CDS
TGAAATGAAATGAAAAGGGT+GGG 0.607773 8_2:+72416904 None:intergenic
GAGACTATGTCAGCCTTGGT+TGG 0.607802 8_2:-72415153 Msa1267270:CDS
AAAGATAACCTGCACACTTG+CGG 0.608984 8_2:+72411430 None:intergenic
CGAGAAATATTATGATTTAG+GGG 0.610738 8_2:-72412460 Msa1267270:CDS
AACTTACTTCGTGCCAACCA+AGG 0.612981 8_2:+72415140 None:intergenic
GCACACTTGCGGCTTCATCA+GGG 0.613086 8_2:+72411441 None:intergenic
TTTGAAACTTGGTTCCGGTG+TGG 0.615743 8_2:-72412436 Msa1267270:CDS
ATACCATTCCAGCAATAGAA+GGG 0.616504 8_2:+72414130 None:intergenic
CCATGGCAATATATAACACA+AGG 0.617756 8_2:+72415416 None:intergenic
CAATAGAGACTTGAGGAGGA+CGG 0.628343 8_2:+72412493 None:intergenic
ATTCATTTCATGACGCCAAG+TGG 0.629844 8_2:-72416459 Msa1267270:five_prime_UTR
CTTAGCTTACAATTAGAGTG+AGG 0.631339 8_2:+72416485 None:intergenic
GTTAAATACCTCATCCACAC+CGG 0.635215 8_2:+72412422 None:intergenic
TGGCTGTACAATACATGCGG+CGG 0.639633 8_2:-72413057 Msa1267270:CDS
TCAGCAATAGAGACTTGAGG+AGG 0.640185 8_2:+72412489 None:intergenic
GCCTGACCCCGAGAAGTCAA+GGG 0.640197 8_2:+72415186 None:intergenic
TAGGGCAGATGCCAATGAAG+CGG 0.642371 8_2:-72415245 Msa1267270:CDS
ATAACCCGGATCAGTATCTG+TGG 0.647394 8_2:-72415688 Msa1267270:CDS
ACACAGGGCGGACTATAACC+CGG 0.648856 8_2:-72415702 Msa1267270:intron
GTCATGTCAGAATACTGTGA+AGG 0.652766 8_2:-72409307 Msa1267270:intron
ACGAGATTCTCTCTAGTCTG+CGG 0.652977 8_2:-72411695 Msa1267270:CDS
AAAGAATAATAATACCTGGG+AGG 0.656822 8_2:+72416385 None:intergenic
TGACAGATTTGAGAAGCTGG+AGG 0.661868 8_2:-72409160 Msa1267270:CDS
TAACCCGGATCAGTATCTGT+GGG 0.666671 8_2:-72415687 Msa1267270:CDS
AGCTCAAATAGAGAAAGTTG+GGG 0.674107 8_2:-72410356 Msa1267270:CDS
AAATGGCTGTACAATACATG+CGG 0.675349 8_2:-72413060 Msa1267270:CDS
TTGCTGGTAGAACCTACCAA+AGG 0.679162 8_2:-72415649 Msa1267270:CDS
CACCCTACTACATCAGTCAG+GGG 0.681270 8_2:+72411582 None:intergenic
GTGCAGCTCAAGAATGCCAG+AGG 0.686724 8_2:-72415497 Msa1267270:intron
ATAAAAGAATTGTGGCCGGG+AGG 0.694195 8_2:+72412548 None:intergenic
TAGAGACTTGAGGAGGACGG+AGG 0.699920 8_2:+72412496 None:intergenic
TATCCCGTATAGGTTTATGG+GGG 0.742479 8_2:-72414781 Msa1267270:CDS
GAGATGAGATCAGAGTGATG+CGG 0.757183 8_2:+72412727 None:intergenic
TCTCATCTCAGAATCCTATG+CGG 0.772408 8_2:-72412713 Msa1267270:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGATTAAGATTTTATTT+TGG - chr8_2:72412262-72412281 Msa1267270:intron 10.0%
!!! AAAGATTTTTTTTTTTTTTG+GGG - chr8_2:72412542-72412561 Msa1267270:CDS 10.0%
!! AAAAATATCATTAAATTTGA+TGG - chr8_2:72413396-72413415 Msa1267270:intron 10.0%
!! AAAGTAACAATAATAATTTA+TGG + chr8_2:72414147-72414166 None:intergenic 10.0%
!! AATTATATTGTAATTATGTT+AGG + chr8_2:72415895-72415914 None:intergenic 10.0%
!! AAAAAAGGAAAAAAAAAAAA+AGG - chr8_2:72416044-72416063 Msa1267270:intron 10.0%
!! AAAAAGAATAAATTGATAAG+AGG - chr8_2:72408872-72408891 Msa1267270:three_prime_UTR 15.0%
!! AAAAGAATAAATTGATAAGA+GGG - chr8_2:72408873-72408892 Msa1267270:three_prime_UTR 15.0%
!! AAAAAAGAATAATAATACCT+GGG + chr8_2:72409599-72409618 None:intergenic 15.0%
!! TAAAAAAGAATAATAATACC+TGG + chr8_2:72409600-72409619 None:intergenic 15.0%
!!! TCTTTTTTATTCATCAAATT+TGG - chr8_2:72409611-72409630 Msa1267270:intron 15.0%
!!! AAAACTTTTTGAAATAGTAT+GGG + chr8_2:72410032-72410051 None:intergenic 15.0%
!! AAGTTAGATAGAAATATATA+TGG - chr8_2:72411289-72411308 Msa1267270:intron 15.0%
!! AAATTGTTAAAACAAAAGTT+GGG - chr8_2:72412327-72412346 Msa1267270:intron 15.0%
!!! CAAAGAACATAATTTTTTTT+GGG + chr8_2:72413635-72413654 None:intergenic 15.0%
!!! ACAAAGAACATAATTTTTTT+TGG + chr8_2:72413636-72413655 None:intergenic 15.0%
!! TAAAATTGAAGATATTAACT+TGG - chr8_2:72413891-72413910 Msa1267270:intron 15.0%
!! AAAATGGAAAAACAAAAAAA+AGG - chr8_2:72413958-72413977 Msa1267270:intron 15.0%
!! AACATTATCATGATTATATA+TGG - chr8_2:72414085-72414104 Msa1267270:CDS 15.0%
!!! TTATTATTGTTACTTTTTTG+TGG - chr8_2:72414151-72414170 Msa1267270:CDS 15.0%
!!! TTTTATATTAGTATGGTTTT+AGG - chr8_2:72414179-72414198 Msa1267270:intron 15.0%
!!! AACTAAATAGAAAGTTTTTT+TGG + chr8_2:72414449-72414468 None:intergenic 15.0%
!! TAAAATATAATTCACGAAAT+CGG + chr8_2:72414922-72414941 None:intergenic 15.0%
!! ATGCTAAAATTATAAAAATG+TGG + chr8_2:72415523-72415542 None:intergenic 15.0%
!!! TTTTTTTCCTTTTTTAGTTT+TGG + chr8_2:72416039-72416058 None:intergenic 15.0%
!! GAAATGAAATGAAATGAAAA+GGG + chr8_2:72409081-72409100 None:intergenic 20.0%
!!! ACTACTACTTTTTCATTTTT+CGG - chr8_2:72409328-72409347 Msa1267270:intron 20.0%
!!! ATTTTAATAAGCTATATTGG+AGG + chr8_2:72409753-72409772 None:intergenic 20.0%
!!! GGTATTTTAATAAGCTATAT+TGG + chr8_2:72409756-72409775 None:intergenic 20.0%
!!! AAACATCATATTAACTTGTT+TGG + chr8_2:72409895-72409914 None:intergenic 20.0%
!!! ATGTTTATCTTCTTTTGATT+TGG - chr8_2:72409961-72409980 Msa1267270:intron 20.0%
!!! AAACTTTTTGAAATAGTATG+GGG + chr8_2:72410031-72410050 None:intergenic 20.0%
!!! CAAAACTTTTTGAAATAGTA+TGG + chr8_2:72410033-72410052 None:intergenic 20.0%
!!! CATACTATTTCAAAAAGTTT+TGG - chr8_2:72410031-72410050 Msa1267270:intron 20.0%
!!! AGTATCGAGTATTTATTTTA+TGG - chr8_2:72410367-72410386 Msa1267270:CDS 20.0%
!!! GTATCGAGTATTTATTTTAT+GGG - chr8_2:72410368-72410387 Msa1267270:CDS 20.0%
!! GTAAAAACAGTAATATTTGA+TGG + chr8_2:72410773-72410792 None:intergenic 20.0%
!!! ATTAAGAATTTATGCTGTTT+TGG - chr8_2:72411397-72411416 Msa1267270:intron 20.0%
!!! AATATTTTTGTTTCAAACAC+AGG + chr8_2:72411586-72411605 None:intergenic 20.0%
!! GAGATTATATAAGTTTGAAA+AGG + chr8_2:72411883-72411902 None:intergenic 20.0%
!! AAACTTATATAATCTCATGA+TGG - chr8_2:72411887-72411906 Msa1267270:intron 20.0%
!!! TTCAAGTCTTTTACAATAAA+GGG + chr8_2:72412020-72412039 None:intergenic 20.0%
!!! TTTCAAGTCTTTTACAATAA+AGG + chr8_2:72412021-72412040 None:intergenic 20.0%
!!! TAATTTCCTTTTTGTTAAGA+TGG - chr8_2:72412195-72412214 Msa1267270:intron 20.0%
!!! TAAGATTTTATTTTGGATCT+AGG - chr8_2:72412269-72412288 Msa1267270:intron 20.0%
!!! AAGATTTTATTTTGGATCTA+GGG - chr8_2:72412270-72412289 Msa1267270:intron 20.0%
!!! AATTATAGCTCTTTTTTACT+AGG - chr8_2:72412304-72412323 Msa1267270:intron 20.0%
!! GAAATTGTTAAAACAAAAGT+TGG - chr8_2:72412326-72412345 Msa1267270:intron 20.0%
!! AATTGTTAAAACAAAAGTTG+GGG - chr8_2:72412328-72412347 Msa1267270:intron 20.0%
!! ATTATTAATCATGACAAGTT+TGG - chr8_2:72412352-72412371 Msa1267270:intron 20.0%
!!! GAATATACTTTTATTTTGCA+TGG - chr8_2:72412389-72412408 Msa1267270:intron 20.0%
!! AACTAGTATCATGTATAATT+AGG - chr8_2:72412486-72412505 Msa1267270:CDS 20.0%
!! AAAAAAATCTTTATGCATTG+TGG + chr8_2:72412534-72412553 None:intergenic 20.0%
!! TATATAGTTGTATACCAATT+TGG + chr8_2:72412634-72412653 None:intergenic 20.0%
!!! TGATTTTATAACTTTTATGC+TGG - chr8_2:72412778-72412797 Msa1267270:CDS 20.0%
!!! GCATTAATTTAAGATAGAAA+TGG + chr8_2:72413153-72413172 None:intergenic 20.0%
!!! TAAACAGAAGTTAGATATTT+TGG + chr8_2:72413359-72413378 None:intergenic 20.0%
!! TCGAGAAATATTATGATTTA+GGG - chr8_2:72413517-72413536 Msa1267270:intron 20.0%
!! ACATTTAACTAAATTCTTTG+AGG + chr8_2:72413800-72413819 None:intergenic 20.0%
!! TTATCCATTACTTATAATGT+AGG - chr8_2:72414468-72414487 Msa1267270:intron 20.0%
!! TACATGTAAAATAAAATTCC+TGG + chr8_2:72414604-72414623 None:intergenic 20.0%
!!! AGGAATTTTATTTTACATGT+AGG - chr8_2:72414603-72414622 Msa1267270:intron 20.0%
!! AGTAAATAAAATACTAGCAA+AGG + chr8_2:72414896-72414915 None:intergenic 20.0%
!! TTAAGAAAAGTTAATCTCAA+AGG + chr8_2:72415079-72415098 None:intergenic 20.0%
!! GAGTAGTTTATTATAAGAAA+AGG - chr8_2:72415324-72415343 Msa1267270:intron 20.0%
!!! AAAGTATTTTTTCTCAAATG+CGG + chr8_2:72416509-72416528 None:intergenic 20.0%
!! TATGATATGATATACAAAAG+AGG + chr8_2:72416912-72416931 None:intergenic 20.0%
!! ATTACAATTAGATTGACTAT+TGG + chr8_2:72416940-72416959 None:intergenic 20.0%
! CGAAATGAAATGAAATGAAA+AGG + chr8_2:72409082-72409101 None:intergenic 25.0%
!! TTTTCGACTTTAATCTTTCT+TGG + chr8_2:72409170-72409189 None:intergenic 25.0%
! ACAAGCAAGTTTATGAAATA+TGG + chr8_2:72409250-72409269 None:intergenic 25.0%
!!! TCAATGTCATACTACTTTTA+AGG - chr8_2:72409285-72409304 Msa1267270:CDS 25.0%
!!! CAATGTCATACTACTTTTAA+GGG - chr8_2:72409286-72409305 Msa1267270:CDS 25.0%
!!! CTACTACTTTTTCATTTTTC+GGG - chr8_2:72409329-72409348 Msa1267270:intron 25.0%
! AAACAATCTCACAAAACTTA+TGG + chr8_2:72409666-72409685 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGATTGTT+TGG - chr8_2:72409665-72409684 Msa1267270:intron 25.0%
!!! CATAAGCTATTTTATAGCAA+AGG + chr8_2:72409817-72409836 None:intergenic 25.0%
! ATAATGAGAACTATCTAACA+TGG + chr8_2:72410095-72410114 None:intergenic 25.0%
! CAATTATTGTTGCCTATATA+TGG - chr8_2:72410397-72410416 Msa1267270:CDS 25.0%
! AAATAAACACATTCACAAAG+AGG + chr8_2:72410865-72410884 None:intergenic 25.0%
! TATGTCATATTATCCTTAGT+TGG - chr8_2:72410956-72410975 Msa1267270:intron 25.0%
! CAAAAAACACATTCATAAAG+AGG + chr8_2:72410996-72411015 None:intergenic 25.0%
! TAAATCGGAAAAACATAAAG+CGG - chr8_2:72411620-72411639 Msa1267270:CDS 25.0%
! ATGTATACAGAGAAAATGTA+AGG + chr8_2:72411742-72411761 None:intergenic 25.0%
! TACTTTCCATCTTAACAAAA+AGG + chr8_2:72412204-72412223 None:intergenic 25.0%
! AAGATGGAAAGTAAAGAAAA+AGG - chr8_2:72412211-72412230 Msa1267270:intron 25.0%
! AAGTATATTCTTCAATCCTA+GGG + chr8_2:72412240-72412259 None:intergenic 25.0%
! TAAGTATATTCTTCAATCCT+AGG + chr8_2:72412241-72412260 None:intergenic 25.0%
! AAAAGAGCTATAATTATGAG+AGG + chr8_2:72412299-72412318 None:intergenic 25.0%
!!! ATTTTGCATGGTTGTTTTTA+AGG - chr8_2:72412401-72412420 Msa1267270:intron 25.0%
!!! TTTTGCATGGTTGTTTTTAA+GGG - chr8_2:72412402-72412421 Msa1267270:intron 25.0%
!!! TGAACTATTTTTTAAGCTGT+AGG - chr8_2:72412568-72412587 Msa1267270:CDS 25.0%
! AGCTGAAAATCAAAATATGT+GGG + chr8_2:72412604-72412623 None:intergenic 25.0%
! GTATACAACTATATATGCAT+TGG - chr8_2:72412639-72412658 Msa1267270:intron 25.0%
!!! TATGCATTGGATTTACTTTT+AGG - chr8_2:72412652-72412671 Msa1267270:intron 25.0%
! TCATTCAATCAAACAATACA+CGG + chr8_2:72412716-72412735 None:intergenic 25.0%
! AAACAAAATATGATCGATGA+AGG + chr8_2:72413056-72413075 None:intergenic 25.0%
!!! ACATTCATTCCTGTTTTATT+TGG - chr8_2:72413200-72413219 Msa1267270:intron 25.0%
! GTATTAAATTAATACCGCAT+AGG + chr8_2:72413282-72413301 None:intergenic 25.0%
!!! GTTAGATATTTTGGCTATTA+AGG + chr8_2:72413350-72413369 None:intergenic 25.0%
! ACTTCTGTTTATGAATTTGT+AGG - chr8_2:72413368-72413387 Msa1267270:intron 25.0%
! CTTCTGTTTATGAATTTGTA+GGG - chr8_2:72413369-72413388 Msa1267270:intron 25.0%
! ACTGAATCATAAAAGAATTG+TGG + chr8_2:72413441-72413460 None:intergenic 25.0%
! CTCGAGAAATATTATGATTT+AGG - chr8_2:72413516-72413535 Msa1267270:intron 25.0%
! CGAGAAATATTATGATTTAG+GGG - chr8_2:72413518-72413537 Msa1267270:intron 25.0%
! TTATTTGTGAACTAACGAAA+TGG - chr8_2:72413825-72413844 Msa1267270:intron 25.0%
! AATGTTTCCAAAAACTGAAA+TGG + chr8_2:72414071-72414090 None:intergenic 25.0%
!!! GGCATTGTTTTATATTAGTA+TGG - chr8_2:72414172-72414191 Msa1267270:intron 25.0%
! AAAAAATAGACAGAAGGTTA+AGG + chr8_2:72414422-72414441 None:intergenic 25.0%
! TTGTCTGTGAAATTAAGAAA+TGG - chr8_2:72414577-72414596 Msa1267270:intron 25.0%
!! AAACTGCAAATGCAATTTTA+AGG - chr8_2:72414961-72414980 Msa1267270:intron 25.0%
!!! TGCAATTTTAAGGTTACTTT+CGG - chr8_2:72414971-72414990 Msa1267270:intron 25.0%
! AAAACTAAGTCTTGATTGAA+TGG - chr8_2:72415262-72415281 Msa1267270:intron 25.0%
! AAACTAAGTCTTGATTGAAT+GGG - chr8_2:72415263-72415282 Msa1267270:intron 25.0%
!! TTTCATTAGTAGACTTTTTG+TGG - chr8_2:72415293-72415312 Msa1267270:intron 25.0%
!!! TTTTAAGTGTTGTTTTACTC+TGG - chr8_2:72415389-72415408 Msa1267270:intron 25.0%
!! TTGACCATTAATGACTTTTA+GGG - chr8_2:72415559-72415578 Msa1267270:intron 25.0%
! GAAGATTAGTATTTAGCTAT+GGG + chr8_2:72415774-72415793 None:intergenic 25.0%
! TGAAGATTAGTATTTAGCTA+TGG + chr8_2:72415775-72415794 None:intergenic 25.0%
! CCTTGCTTATATATATTTCA+TGG + chr8_2:72416000-72416019 None:intergenic 25.0%
! CCATGAAATATATATAAGCA+AGG - chr8_2:72415997-72416016 Msa1267270:intron 25.0%
!!! TTTAGTTTTGGACCTAAATT+TGG + chr8_2:72416027-72416046 None:intergenic 25.0%
! TTTAGGTCCAAAACTAAAAA+AGG - chr8_2:72416029-72416048 Msa1267270:intron 25.0%
! AAAAAAAAAAAAGGACACCA+AGG - chr8_2:72416053-72416072 Msa1267270:intron 25.0%
! AAAAAAAAAAAGGACACCAA+GGG - chr8_2:72416054-72416073 Msa1267270:intron 25.0%
! AAAAGTGAGAATTTGAGAAA+TGG + chr8_2:72416219-72416238 None:intergenic 25.0%
! AGAATAGAAGATGTAGAAAT+TGG - chr8_2:72416358-72416377 Msa1267270:intron 25.0%
! GAATAGAAGATGTAGAAATT+GGG - chr8_2:72416359-72416378 Msa1267270:intron 25.0%
! AATAGAAGATGTAGAAATTG+GGG - chr8_2:72416360-72416379 Msa1267270:intron 25.0%
!!! TTTTAGGAATTGCCAAATAT+TGG - chr8_2:72417027-72417046 Msa1267270:five_prime_UTR 25.0%
! TTTAGGAATTGCCAAATATT+TGG - chr8_2:72417028-72417047 Msa1267270:five_prime_UTR 25.0%
AATTGATAAGAGGGAAAGAA+AGG - chr8_2:72408882-72408901 Msa1267270:three_prime_UTR 30.0%
AAATAAGCTGAGAAGAAGTA+TGG + chr8_2:72409023-72409042 None:intergenic 30.0%
ATACTTCTTCTCAGCTTATT+TGG - chr8_2:72409022-72409041 Msa1267270:three_prime_UTR 30.0%
TGAAATGAAATGAAAAGGGT+GGG + chr8_2:72409077-72409096 None:intergenic 30.0%
ATGAAATGAAATGAAAAGGG+TGG + chr8_2:72409078-72409097 None:intergenic 30.0%
ACTTTAATCTTTCTTGGCTT+GGG + chr8_2:72409164-72409183 None:intergenic 30.0%
! TGCGTCAATTTTTCATCATT+TGG - chr8_2:72409192-72409211 Msa1267270:CDS 30.0%
! GCGTCAATTTTTCATCATTT+GGG - chr8_2:72409193-72409212 Msa1267270:CDS 30.0%
! GATTCTTTTAAACTTCTCAC+AGG - chr8_2:72409351-72409370 Msa1267270:intron 30.0%
TTTAAACTTCTCACAGGAAT+TGG - chr8_2:72409357-72409376 Msa1267270:intron 30.0%
TCACAACTCAAAAGTCAAAT+TGG + chr8_2:72409423-72409442 None:intergenic 30.0%
AAGAATAATAATACCTGGGA+GGG + chr8_2:72409595-72409614 None:intergenic 30.0%
AAAGAATAATAATACCTGGG+AGG + chr8_2:72409596-72409615 None:intergenic 30.0%
TAAGATAAGCTGCTCAAATA+AGG + chr8_2:72409641-72409660 None:intergenic 30.0%
ATGTTTCTTTCTTCACTAAG+AGG - chr8_2:72409909-72409928 Msa1267270:intron 30.0%
TTGCAAATTGAGTTACAGTT+TGG - chr8_2:72410233-72410252 Msa1267270:intron 30.0%
TGCAAATTGAGTTACAGTTT+GGG - chr8_2:72410234-72410253 Msa1267270:intron 30.0%
TATTGTTGCCTATATATGGA+AGG - chr8_2:72410401-72410420 Msa1267270:CDS 30.0%
TATCTTCAGGAAAAGGAAAA+GGG + chr8_2:72410534-72410553 None:intergenic 30.0%
TTATATATTGCCATGGAAAC+AGG - chr8_2:72410569-72410588 Msa1267270:intron 30.0%
!!! ACAGGTATGTGTTACTTTTA+TGG - chr8_2:72410587-72410606 Msa1267270:intron 30.0%
ACAAGTACACATATCAAAAG+GGG + chr8_2:72410693-72410712 None:intergenic 30.0%
CACAAGTACACATATCAAAA+GGG + chr8_2:72410694-72410713 None:intergenic 30.0%
ACACAAGTACACATATCAAA+AGG + chr8_2:72410695-72410714 None:intergenic 30.0%
AACAAACAAATATCCCGTAT+AGG - chr8_2:72411187-72411206 Msa1267270:intron 30.0%
AAATATCCCGTATAGGTTTA+TGG - chr8_2:72411194-72411213 Msa1267270:intron 30.0%
AATATCCCGTATAGGTTTAT+GGG - chr8_2:72411195-72411214 Msa1267270:intron 30.0%
TAGAACATTATTGCATCGTT+TGG - chr8_2:72411319-72411338 Msa1267270:intron 30.0%
AAATCGGAAAAACATAAAGC+GGG - chr8_2:72411621-72411640 Msa1267270:CDS 30.0%
!! TAATGTTCACTTTGCTTTTG+TGG - chr8_2:72411797-72411816 Msa1267270:intron 30.0%
!! AATGTTCACTTTGCTTTTGT+GGG - chr8_2:72411798-72411817 Msa1267270:intron 30.0%
TTGTGGACGTTTATAAAATC+CGG - chr8_2:72411913-72411932 Msa1267270:intron 30.0%
! TCTTTTACAATAAAGGGAGT+TGG + chr8_2:72412014-72412033 None:intergenic 30.0%
!!! TTTGCATGGTTGTTTTTAAG+GGG - chr8_2:72412403-72412422 Msa1267270:intron 30.0%
ATGATACTAGTTGAAACTCT+CGG + chr8_2:72412478-72412497 None:intergenic 30.0%
!!! ATTTTTTAAGCTGTAGGTGT+AGG - chr8_2:72412574-72412593 Msa1267270:CDS 30.0%
GAGCTGAAAATCAAAATATG+TGG + chr8_2:72412605-72412624 None:intergenic 30.0%
GTTTGATTGAATGAATGAAC+TGG - chr8_2:72412722-72412741 Msa1267270:CDS 30.0%
GTTATAAAATCACGCAAACT+AGG + chr8_2:72412770-72412789 None:intergenic 30.0%
! GTCTAGTATGTTTGTTAAGT+CGG - chr8_2:72412863-72412882 Msa1267270:intron 30.0%
TTCTCCCAATTAGGTTAAAA+TGG - chr8_2:72412901-72412920 Msa1267270:intron 30.0%
!! ACAGCCATTTTAACCTAATT+GGG + chr8_2:72412908-72412927 None:intergenic 30.0%
!! TACAGCCATTTTAACCTAAT+TGG + chr8_2:72412909-72412928 None:intergenic 30.0%
TATGAAATTGAACTGTGTTC+TGG - chr8_2:72412973-72412992 Msa1267270:intron 30.0%
!!! TTAATGCTTTTAAAGCGTAC+AGG - chr8_2:72413166-72413185 Msa1267270:intron 30.0%
AAAACAGGAATGAATGTCTT+CGG + chr8_2:72413197-72413216 None:intergenic 30.0%
AATCATAAAAGAATTGTGGC+CGG + chr8_2:72413437-72413456 None:intergenic 30.0%
AAGAACATAATTAAGTGAGC+AGG + chr8_2:72413605-72413624 None:intergenic 30.0%
TCTTGAGCAAGGTAAAATTA+TGG + chr8_2:72413933-72413952 None:intergenic 30.0%
! TCAACTTCCATTTCAGTTTT+TGG - chr8_2:72414061-72414080 Msa1267270:CDS 30.0%
! GATTTTGTTGCAGATATTGT+TGG + chr8_2:72414348-72414367 None:intergenic 30.0%
GGAAGAAAAAAATAGACAGA+AGG + chr8_2:72414428-72414447 None:intergenic 30.0%
TTGAAGAACTTTGCAATTTG+AGG + chr8_2:72414741-72414760 None:intergenic 30.0%
!!! TTTTAAGGTTACTTTCGGAA+TGG - chr8_2:72414976-72414995 Msa1267270:intron 30.0%
! TTTAAGGTTACTTTCGGAAT+GGG - chr8_2:72414977-72414996 Msa1267270:intron 30.0%
ACTTGTGAAAAAATCCTTGT+AGG + chr8_2:72415198-72415217 None:intergenic 30.0%
!!! ACTTAGTTTTTAGAGTAGTG+GGG + chr8_2:72415252-72415271 None:intergenic 30.0%
!!! GACTTAGTTTTTAGAGTAGT+GGG + chr8_2:72415253-72415272 None:intergenic 30.0%
!!! AGACTTAGTTTTTAGAGTAG+TGG + chr8_2:72415254-72415273 None:intergenic 30.0%
TAACTATGATCTGTTGATCA+GGG + chr8_2:72415355-72415374 None:intergenic 30.0%
ATAACTATGATCTGTTGATC+AGG + chr8_2:72415356-72415375 None:intergenic 30.0%
ACATAAAGCTAACAAAGACA+TGG + chr8_2:72415421-72415440 None:intergenic 30.0%
GAAGTTAAAATTGACAAGTG+TGG - chr8_2:72415488-72415507 Msa1267270:CDS 30.0%
! CTTGACCATTAATGACTTTT+AGG - chr8_2:72415558-72415577 Msa1267270:intron 30.0%
AAGCTCAAATAGAGAAAGTT+GGG - chr8_2:72415621-72415640 Msa1267270:intron 30.0%
TATTTAGCTATGGGAAAATG+TGG + chr8_2:72415765-72415784 None:intergenic 30.0%
!! GTTAGGAGTAATTAGTCTTT+AGG + chr8_2:72415878-72415897 None:intergenic 30.0%
CACTTAAGTAGGTTAATGAA+GGG + chr8_2:72415951-72415970 None:intergenic 30.0%
TCACTTAAGTAGGTTAATGA+AGG + chr8_2:72415952-72415971 None:intergenic 30.0%
GAATAGGTAATATTGACCAA+GGG - chr8_2:72416076-72416095 Msa1267270:intron 30.0%
AAGATGGTAAATTGACATCA+TGG - chr8_2:72416100-72416119 Msa1267270:intron 30.0%
TTGACATCATGGCTATAAAT+AGG - chr8_2:72416111-72416130 Msa1267270:intron 30.0%
ATCAGAGTTCACAAAATTTG+CGG - chr8_2:72416151-72416170 Msa1267270:intron 30.0%
ATTTGAGAAATGGTGATTTG+TGG + chr8_2:72416209-72416228 None:intergenic 30.0%
!! ACTTGTTTGTGGTTTTACTA+CGG + chr8_2:72416255-72416274 None:intergenic 30.0%
CTGAAAATTCTACTTGTTTG+TGG + chr8_2:72416266-72416285 None:intergenic 30.0%
TAAATAAGCTTCTTCACACT+TGG + chr8_2:72416303-72416322 None:intergenic 30.0%
AGAAGCTTATTTACTGAAGA+TGG - chr8_2:72416310-72416329 Msa1267270:intron 30.0%
ATAGAAGATGTAGAAATTGG+GGG - chr8_2:72416361-72416380 Msa1267270:intron 30.0%
! ATTTGCCTGCTAGTTTATAT+AGG - chr8_2:72416599-72416618 Msa1267270:five_prime_UTR 30.0%
! TTTGCCTGCTAGTTTATATA+GGG - chr8_2:72416600-72416619 Msa1267270:five_prime_UTR 30.0%
TAGCAATAAATACACATGAG+TGG + chr8_2:72416640-72416659 None:intergenic 30.0%
! TTCTTCTTTTTACCCTTCTT+CGG + chr8_2:72416762-72416781 None:intergenic 30.0%
GAAGAAGAAAAAAGCTGAAA+CGG - chr8_2:72416776-72416795 Msa1267270:intron 30.0%
AAAACACAAATTTCGTGTGT+AGG - chr8_2:72416966-72416985 Msa1267270:five_prime_UTR 30.0%
!! AGCATGACTAACTCATTTTT+AGG - chr8_2:72417011-72417030 Msa1267270:five_prime_UTR 30.0%
TAATGATAACAGCGAAATGA+AGG + chr8_2:72417064-72417083 None:intergenic 30.0%
! GAACATGACTAACTCATTTT+AGG - chr8_2:72417092-72417111 Msa1267270:five_prime_UTR 30.0%
TGGTGTTCTTGGAATTGAAT+TGG - chr8_2:72408923-72408942 Msa1267270:three_prime_UTR 35.0%
GACTTTAATCTTTCTTGGCT+TGG + chr8_2:72409165-72409184 None:intergenic 35.0%
GTAGTAGTTTCAGATCCAAA+TGG + chr8_2:72409316-72409335 None:intergenic 35.0%
AGTTGTGAAGAAAGAGAGAT+TGG - chr8_2:72409435-72409454 Msa1267270:intron 35.0%
CTTAGCTTACAATTAGAGTG+AGG + chr8_2:72409496-72409515 None:intergenic 35.0%
GTATCTATCTTATAGCCACT+TGG + chr8_2:72409537-72409556 None:intergenic 35.0%
TAAGCTATATTGGAGGACTT+AGG + chr8_2:72409746-72409765 None:intergenic 35.0%
! TGTGTTTTGTGTATGCTGTA+AGG + chr8_2:72409777-72409796 None:intergenic 35.0%
TTCTTCACTAAGAGGTCAAT+AGG - chr8_2:72409917-72409936 Msa1267270:intron 35.0%
TCTTCACTAAGAGGTCAATA+GGG - chr8_2:72409918-72409937 Msa1267270:intron 35.0%
! CATGGTTCTTTGAAGATTGT+TGG + chr8_2:72410077-72410096 None:intergenic 35.0%
ACATGTTGAGACTTGAGAAA+TGG + chr8_2:72410199-72410218 None:intergenic 35.0%
TTATACTTTGCCACATACAC+AGG - chr8_2:72410260-72410279 Msa1267270:intron 35.0%
TATACTTTGCCACATACACA+GGG - chr8_2:72410261-72410280 Msa1267270:intron 35.0%
GTGATGTACCTTCCATATAT+AGG + chr8_2:72410412-72410431 None:intergenic 35.0%
GAGATAATGACTACACTTCA+AGG + chr8_2:72410512-72410531 None:intergenic 35.0%
GTATCTTCAGGAAAAGGAAA+AGG + chr8_2:72410535-72410554 None:intergenic 35.0%
!! AGAGAAGTATCTTCAGGAAA+AGG + chr8_2:72410541-72410560 None:intergenic 35.0%
CCATGGCAATATATAACACA+AGG + chr8_2:72410565-72410584 None:intergenic 35.0%
CCTTGTGTTATATATTGCCA+TGG - chr8_2:72410562-72410581 Msa1267270:intron 35.0%
TAATTCAGAACCAATAGCAG+TGG + chr8_2:72410613-72410632 None:intergenic 35.0%
ACTTGTGTTAAATGATGCAG+TGG - chr8_2:72410707-72410726 Msa1267270:intron 35.0%
TTAAATGATGCAGTGGATGT+AGG - chr8_2:72410714-72410733 Msa1267270:intron 35.0%
TAAATGATGCAGTGGATGTA+GGG - chr8_2:72410715-72410734 Msa1267270:intron 35.0%
!! TGTTTTTACCCTTGACTTCT+CGG - chr8_2:72410784-72410803 Msa1267270:intron 35.0%
!! TGTTTTTACCCTTGTCTTCT+CGG - chr8_2:72410910-72410929 Msa1267270:intron 35.0%
AAGTTACTTCAAGCCAACTA+AGG + chr8_2:72410972-72410991 None:intergenic 35.0%
TCTTGCACGTGAAATTGTAA+CGG + chr8_2:72411089-72411108 None:intergenic 35.0%
ATCATCTTTCTACCACACAA+AGG + chr8_2:72411137-72411156 None:intergenic 35.0%
GAAAGATGATCTGAAGATTG+TGG - chr8_2:72411147-72411166 Msa1267270:intron 35.0%
ATATCCCGTATAGGTTTATG+GGG - chr8_2:72411196-72411215 Msa1267270:intron 35.0%
AAAACTTATCCCACTAAGTG+GGG + chr8_2:72411358-72411377 None:intergenic 35.0%
CAAAACTTATCCCACTAAGT+GGG + chr8_2:72411359-72411378 None:intergenic 35.0%
GTATCTCACCAAGAAAAGAA+AGG - chr8_2:72411440-72411459 Msa1267270:CDS 35.0%
! ATTGAGGTCCTTTCTTTTCT+TGG + chr8_2:72411451-72411470 None:intergenic 35.0%
AAGAAAAGAAAGGACCTCAA+TGG - chr8_2:72411450-72411469 Msa1267270:CDS 35.0%
AGAAAAGAAAGGACCTCAAT+GGG - chr8_2:72411451-72411470 Msa1267270:CDS 35.0%
TATGTGAAAATCACCCATTG+AGG + chr8_2:72411467-72411486 None:intergenic 35.0%
! TCCACTAAAGTTTTCTGTCA+AGG - chr8_2:72411502-72411521 Msa1267270:intron 35.0%
! CCACTAAAGTTTTCTGTCAA+GGG - chr8_2:72411503-72411522 Msa1267270:intron 35.0%
ATACCATTCCAGCAATAGAA+GGG + chr8_2:72411851-72411870 None:intergenic 35.0%
AATACCATTCCAGCAATAGA+AGG + chr8_2:72411852-72411871 None:intergenic 35.0%
TTCTATTGCTGGAATGGTAT+TGG - chr8_2:72411851-72411870 Msa1267270:intron 35.0%
CATTCTTCATAAGTTGTTGC+TGG - chr8_2:72412101-72412120 Msa1267270:intron 35.0%
GTAAAGAAAAAGGAATCCCT+AGG - chr8_2:72412221-72412240 Msa1267270:intron 35.0%
ATGTATAATTAGGCCAAAGC+TGG - chr8_2:72412496-72412515 Msa1267270:CDS 35.0%
TGTATAATTAGGCCAAAGCT+GGG - chr8_2:72412497-72412516 Msa1267270:CDS 35.0%
CAATTCTAACTGACAGCTAT+AGG + chr8_2:72412844-72412863 None:intergenic 35.0%
! TGTTGCATTTTCTCCCAATT+AGG - chr8_2:72412892-72412911 Msa1267270:intron 35.0%
AAATGGCTGTACAATACATG+CGG - chr8_2:72412918-72412937 Msa1267270:intron 35.0%
ATGACGAATCTAACCACAAT+AGG - chr8_2:72413085-72413104 Msa1267270:intron 35.0%
!! AACCACAATAGGCTTTATTC+AGG - chr8_2:72413096-72413115 Msa1267270:intron 35.0%
AACCTGAATAAAGCCTATTG+TGG + chr8_2:72413101-72413120 None:intergenic 35.0%
CTTGCATGTCCAAATAAAAC+AGG + chr8_2:72413212-72413231 None:intergenic 35.0%
ATCATAAAAGAATTGTGGCC+GGG + chr8_2:72413436-72413455 None:intergenic 35.0%
GAGGACATTGTAGAAGAAAA+TGG + chr8_2:72413466-72413485 None:intergenic 35.0%
! TTTTCAGCAATAGAGACTTG+AGG + chr8_2:72413495-72413514 None:intergenic 35.0%
! GATTTAGGGGATTTGAAACT+TGG - chr8_2:72413531-72413550 Msa1267270:intron 35.0%
TGAATAACTAGTAGTGTGGA+GGG + chr8_2:72413668-72413687 None:intergenic 35.0%
! AACTAAATTCTTTGAGGACC+AGG + chr8_2:72413794-72413813 None:intergenic 35.0%
! CATTTTGTTGATCTTGAGCA+AGG + chr8_2:72413944-72413963 None:intergenic 35.0%
CTTGCTCAAGATCAACAAAA+TGG - chr8_2:72413942-72413961 Msa1267270:intron 35.0%
TGAAACCTCTAATCATGTCT+GGG - chr8_2:72414008-72414027 Msa1267270:intron 35.0%
GGTGCCTACATTATAAGTAA+TGG + chr8_2:72414475-72414494 None:intergenic 35.0%
GTAGTTTCATCTTCAAGCAA+GGG + chr8_2:72414496-72414515 None:intergenic 35.0%
TGTAGTTTCATCTTCAAGCA+AGG + chr8_2:72414497-72414516 None:intergenic 35.0%
GAAACTACAGATGACAATGA+TGG - chr8_2:72414508-72414527 Msa1267270:intron 35.0%
! ACAGATGACAATGATGGAAT+TGG - chr8_2:72414514-72414533 Msa1267270:intron 35.0%
GTGAAATTAAGAAATGGTCC+AGG - chr8_2:72414583-72414602 Msa1267270:intron 35.0%
!! CACTTTAAAATCTACACGAG+AGG - chr8_2:72414650-72414669 Msa1267270:intron 35.0%
ATGCTAGTAACACACTCTTA+TGG - chr8_2:72414674-72414693 Msa1267270:intron 35.0%
! CACTCTTATGGACATTCTTT+TGG - chr8_2:72414686-72414705 Msa1267270:intron 35.0%
! AATACTAGCAAAGGTACAGT+AGG + chr8_2:72414887-72414906 None:intergenic 35.0%
!! TTGTTAGCTTTATGTAAGCC+TGG - chr8_2:72415426-72415445 Msa1267270:CDS 35.0%
!!! TGTCGTTGATGACATCATTT+TGG - chr8_2:72415462-72415481 Msa1267270:CDS 35.0%
TAATGGTCAAGTTCAAGTGA+AGG + chr8_2:72415549-72415568 None:intergenic 35.0%
CTTGCCCTAAAAGTCATTAA+TGG + chr8_2:72415566-72415585 None:intergenic 35.0%
ATGAGCAACAATCTTCAATC+TGG + chr8_2:72415597-72415616 None:intergenic 35.0%
CAAGCTCAAATAGAGAAAGT+TGG - chr8_2:72415620-72415639 Msa1267270:intron 35.0%
AGCTCAAATAGAGAAAGTTG+GGG - chr8_2:72415622-72415641 Msa1267270:intron 35.0%
TTGAGTTTCTACAAAGGGTA+AGG + chr8_2:72415798-72415817 None:intergenic 35.0%
TTACCCTTTGTAGAAACTCA+AGG - chr8_2:72415797-72415816 Msa1267270:intron 35.0%
TCTCCTTGAGTTTCTACAAA+GGG + chr8_2:72415803-72415822 None:intergenic 35.0%
TTCTCCTTGAGTTTCTACAA+AGG + chr8_2:72415804-72415823 None:intergenic 35.0%
AACCTACTTAAGTGAGTTAG+AGG - chr8_2:72415957-72415976 Msa1267270:intron 35.0%
!! GTTTTGGACCTAAATTTGGT+TGG + chr8_2:72416023-72416042 None:intergenic 35.0%
GTCAATATTACCTATTCCCT+TGG + chr8_2:72416073-72416092 None:intergenic 35.0%
GGAATAGGTAATATTGACCA+AGG - chr8_2:72416075-72416094 Msa1267270:intron 35.0%
AATATTGACCAAGGGTAAGA+TGG - chr8_2:72416084-72416103 Msa1267270:intron 35.0%
TCAATTTACCATCTTACCCT+TGG + chr8_2:72416095-72416114 None:intergenic 35.0%
GCTATAAATAGGAGATAGCA+AGG - chr8_2:72416122-72416141 Msa1267270:intron 35.0%
TACTGAAGATGGAAGATCAA+CGG - chr8_2:72416321-72416340 Msa1267270:intron 35.0%
!! TAACGCCTCATTTTTAGAGA+GGG + chr8_2:72416537-72416556 None:intergenic 35.0%
!! ATAACGCCTCATTTTTAGAG+AGG + chr8_2:72416538-72416557 None:intergenic 35.0%
AGAACCCTATATAAACTAGC+AGG + chr8_2:72416607-72416626 None:intergenic 35.0%
TTCTCTTTCATACTTCGCAA+AGG + chr8_2:72416708-72416727 None:intergenic 35.0%
TTCTCAAATCTGTCACTCTT+TGG + chr8_2:72416813-72416832 None:intergenic 35.0%
!! AGATGACTTGTTTCTTCGAT+GGG + chr8_2:72416886-72416905 None:intergenic 35.0%
!! AAGATGACTTGTTTCTTCGA+TGG + chr8_2:72416887-72416906 None:intergenic 35.0%
!! GCCAAATATTGGTTTCTGAT+TGG - chr8_2:72417038-72417057 Msa1267270:five_prime_UTR 35.0%
GCCAATCAGAAACCAATATT+TGG + chr8_2:72417042-72417061 None:intergenic 35.0%
! GAGAAGAAGTATGGTTAGAG+AGG + chr8_2:72409014-72409033 None:intergenic 40.0%
CTTCTTCTCAGCTTATTTGG+TGG - chr8_2:72409025-72409044 Msa1267270:three_prime_UTR 40.0%
!! ACTTTTAAGGGAACGCCATT+TGG - chr8_2:72409298-72409317 Msa1267270:CDS 40.0%
ATTCATTTCATGACGCCAAG+TGG - chr8_2:72409519-72409538 Msa1267270:intron 40.0%
TACTGTGCTCAAACTGAACA+TGG - chr8_2:72409999-72410018 Msa1267270:intron 40.0%
GACTTGAGAAATGGATGTTG+AGG + chr8_2:72410190-72410209 None:intergenic 40.0%
! TTTTCCCACAGATACTGATC+CGG + chr8_2:72410298-72410317 None:intergenic 40.0%
GAAAAGGAATTCTCTCTTGC+TGG - chr8_2:72410313-72410332 Msa1267270:CDS 40.0%
GCAGTACATACGCAAACAAT+TGG + chr8_2:72410439-72410458 None:intergenic 40.0%
!! CAAGGAAGAGAAGTATCTTC+AGG + chr8_2:72410547-72410566 None:intergenic 40.0%
GTAACACATACCTGTTTCCA+TGG + chr8_2:72410582-72410601 None:intergenic 40.0%
! ACTTTTATGGCCACTGCTAT+TGG - chr8_2:72410600-72410619 Msa1267270:intron 40.0%
! GTTTTTACCCTTGACTTCTC+GGG - chr8_2:72410785-72410804 Msa1267270:intron 40.0%
! TTTTTACCCTTGACTTCTCG+GGG - chr8_2:72410786-72410805 Msa1267270:intron 40.0%
! GTTTTTACCCTTGTCTTCTC+GGG - chr8_2:72410911-72410930 Msa1267270:intron 40.0%
! TTTTTACCCTTGTCTTCTCG+GGG - chr8_2:72410912-72410931 Msa1267270:intron 40.0%
CACACAAAGGAATGGTCAAA+AGG + chr8_2:72411124-72411143 None:intergenic 40.0%
! CTTTTGACCATTCCTTTGTG+TGG - chr8_2:72411122-72411141 Msa1267270:intron 40.0%
CTTTCTACCACACAAAGGAA+TGG + chr8_2:72411132-72411151 None:intergenic 40.0%
TATCCCGTATAGGTTTATGG+GGG - chr8_2:72411197-72411216 Msa1267270:intron 40.0%
CCAAAACTTATCCCACTAAG+TGG + chr8_2:72411360-72411379 None:intergenic 40.0%
! CCACTTAGTGGGATAAGTTT+TGG - chr8_2:72411357-72411376 Msa1267270:intron 40.0%
!! CTTAGTGGGATAAGTTTTGG+TGG - chr8_2:72411360-72411379 Msa1267270:intron 40.0%
CCCTTGACAGAAAACTTTAG+TGG + chr8_2:72411506-72411525 None:intergenic 40.0%
TTTCTCTCCATGCATCTTTG+TGG - chr8_2:72411541-72411560 Msa1267270:intron 40.0%
! GTTTTGTCCACAAAGATGCA+TGG + chr8_2:72411551-72411570 None:intergenic 40.0%
CTTTGTGGACAAAACTGTTG+AGG - chr8_2:72411556-72411575 Msa1267270:intron 40.0%
! GTGGGATTTAGCCTTCTTTA+TGG - chr8_2:72411816-72411835 Msa1267270:intron 40.0%
! TAATCTCATGATGGAGCTTG+TGG - chr8_2:72411896-72411915 Msa1267270:intron 40.0%
TAAAGGGAGTTGGCAATACT+TGG + chr8_2:72412004-72412023 None:intergenic 40.0%
CATAAGTTGTTGCTGGAATC+TGG - chr8_2:72412108-72412127 Msa1267270:intron 40.0%
! TATTCTAGCCTCTAGCTTGT+AGG - chr8_2:72412143-72412162 Msa1267270:intron 40.0%
!! TGTTTTTAAGGGGTTGTCAC+AGG - chr8_2:72412413-72412432 Msa1267270:intron 40.0%
GTAGTTGAAATTCCCAGCTT+TGG + chr8_2:72412512-72412531 None:intergenic 40.0%
!!! CTGGTTACTTTTGAGCAACA+TGG - chr8_2:72412797-72412816 Msa1267270:intron 40.0%
TCTCATCTCAGAATCCTATG+CGG - chr8_2:72413265-72413284 Msa1267270:intron 40.0%
GTTAAATACCTCATCCACAC+CGG + chr8_2:72413559-72413578 None:intergenic 40.0%
CTGAATAACTAGTAGTGTGG+AGG + chr8_2:72413669-72413688 None:intergenic 40.0%
GCACTGAATAACTAGTAGTG+TGG + chr8_2:72413672-72413691 None:intergenic 40.0%
TAGAGGTTTCAGGCAAGTTA+AGG + chr8_2:72413999-72414018 None:intergenic 40.0%
CAGACATGATTAGAGGTTTC+AGG + chr8_2:72414009-72414028 None:intergenic 40.0%
CTGAAACCTCTAATCATGTC+TGG - chr8_2:72414007-72414026 Msa1267270:intron 40.0%
GAAACCTCTAATCATGTCTG+GGG - chr8_2:72414009-72414028 Msa1267270:intron 40.0%
AAAGATAACCTGCACACTTG+CGG + chr8_2:72414551-72414570 None:intergenic 40.0%
TCAATGTGTAGGAGGAATGT+TGG + chr8_2:72414836-72414855 None:intergenic 40.0%
CATTCCTCCTACACATTGAA+CGG - chr8_2:72414837-72414856 Msa1267270:intron 40.0%
!! AAAAGCACCGTTCAATGTGT+AGG + chr8_2:72414847-72414866 None:intergenic 40.0%
GATAGACAAAGTTCGAAGAG+TGG - chr8_2:72415019-72415038 Msa1267270:intron 40.0%
AACAATTATGTGCGCCTACA+AGG - chr8_2:72415181-72415200 Msa1267270:CDS 40.0%
ATCAACGACATAAGAAAGCC+AGG + chr8_2:72415452-72415471 None:intergenic 40.0%
AATTGACAAGTGTGGAGACT+CGG - chr8_2:72415496-72415515 Msa1267270:intron 40.0%
!!! GACTTTTAGGGCAAGCTAAA+TGG - chr8_2:72415571-72415590 Msa1267270:intron 40.0%
CTCCTCTAACTCACTTAAGT+AGG + chr8_2:72415962-72415981 None:intergenic 40.0%
AAGCAAGGCCAACCAAATTT+AGG - chr8_2:72416012-72416031 Msa1267270:intron 40.0%
AAAAAGGACACCAAGGGAAT+AGG - chr8_2:72416060-72416079 Msa1267270:intron 40.0%
AAGCTTCTTCACACTTGGAA+TGG + chr8_2:72416298-72416317 None:intergenic 40.0%
AGATGTAGAAATTGGGGGAA+AGG - chr8_2:72416366-72416385 Msa1267270:intron 40.0%
! AAGCTCCCTCTCTAAAAATG+AGG - chr8_2:72416529-72416548 Msa1267270:five_prime_UTR 40.0%
GTCATGTCAGAATACTGTGA+AGG - chr8_2:72416671-72416690 Msa1267270:intron 40.0%
AGATGAAAAGAAGCCGAAGA+AGG - chr8_2:72416746-72416765 Msa1267270:intron 40.0%
GATGAAAAGAAGCCGAAGAA+GGG - chr8_2:72416747-72416766 Msa1267270:intron 40.0%
! TTGCGGCTTTGTCTTCTTAA+GGG - chr8_2:72416855-72416874 Msa1267270:intron 40.0%
! CTTCTCAGCTTATTTGGTGG+TGG - chr8_2:72409028-72409047 Msa1267270:three_prime_UTR 45.0%
TGGTAGCTTAGCTCAGACTT+TGG - chr8_2:72409051-72409070 Msa1267270:three_prime_UTR 45.0%
GGCTTGGGAACAGACAAAAA+AGG + chr8_2:72409149-72409168 None:intergenic 45.0%
ATAACCCGGATCAGTATCTG+TGG - chr8_2:72410290-72410309 Msa1267270:CDS 45.0%
TAACCCGGATCAGTATCTGT+GGG - chr8_2:72410291-72410310 Msa1267270:CDS 45.0%
TTTCCCACAGATACTGATCC+GGG + chr8_2:72410297-72410316 None:intergenic 45.0%
GGATCAGTATCTGTGGGAAA+AGG - chr8_2:72410297-72410316 Msa1267270:CDS 45.0%
TTGCTGGTAGAACCTACCAA+AGG - chr8_2:72410329-72410348 Msa1267270:CDS 45.0%
CTCTAAATCCTGCCTTTGGT+AGG + chr8_2:72410344-72410363 None:intergenic 45.0%
CTACCAAAGGCAGGATTTAG+AGG - chr8_2:72410342-72410361 Msa1267270:CDS 45.0%
TTGCCTCTAAATCCTGCCTT+TGG + chr8_2:72410348-72410367 None:intergenic 45.0%
ACACTTCAAGGTATAGCCTC+TGG + chr8_2:72410500-72410519 None:intergenic 45.0%
GAGAATTACAGCCGCTTCAT+TGG + chr8_2:72410747-72410766 None:intergenic 45.0%
AACTTACTTCGTGCCAACCA+AGG + chr8_2:72410841-72410860 None:intergenic 45.0%
!! AGATTGTGGTGTCGCATTTG+AGG - chr8_2:72411161-72411180 Msa1267270:intron 45.0%
ACCTCCCCCATAAACCTATA+CGG + chr8_2:72411204-72411223 None:intergenic 45.0%
TCCAGCAATAGAAGGGTCTT+CGG + chr8_2:72411844-72411863 None:intergenic 45.0%
AGACCCTTCTATTGCTGGAA+TGG - chr8_2:72411845-72411864 Msa1267270:intron 45.0%
AATCCGGCTTCCAAAGTTCA+CGG - chr8_2:72411929-72411948 Msa1267270:intron 45.0%
!! AGAGAGAGTACCGTGAACTT+TGG + chr8_2:72411942-72411961 None:intergenic 45.0%
CAATACTTGGCATCCACACA+GGG + chr8_2:72411991-72412010 None:intergenic 45.0%
TTCAGCTCGACTGTCCAAAT+TGG - chr8_2:72412617-72412636 Msa1267270:intron 45.0%
GAGATGAGATCAGAGTGATG+CGG + chr8_2:72413254-72413273 None:intergenic 45.0%
ATAAAAGAATTGTGGCCGGG+AGG + chr8_2:72413433-72413452 None:intergenic 45.0%
CAATAGAGACTTGAGGAGGA+CGG + chr8_2:72413488-72413507 None:intergenic 45.0%
TCAGCAATAGAGACTTGAGG+AGG + chr8_2:72413492-72413511 None:intergenic 45.0%
! GGGGATTTGAAACTTGGTTC+CGG - chr8_2:72413537-72413556 Msa1267270:intron 45.0%
! TTTGAAACTTGGTTCCGGTG+TGG - chr8_2:72413542-72413561 Msa1267270:intron 45.0%
GTTTCAGGCAAGTTAAGGCT+AGG + chr8_2:72413994-72414013 None:intergenic 45.0%
ACGAGATTCTCTCTAGTCTG+CGG - chr8_2:72414283-72414302 Msa1267270:intron 45.0%
AAAGTTCGAAGAGTGGCTAG+TGG - chr8_2:72415026-72415045 Msa1267270:intron 45.0%
CAAATAGAGAAAGTTGGGGC+AGG - chr8_2:72415626-72415645 Msa1267270:intron 45.0%
TGCTGATGATAAGCTCTCTC+AGG - chr8_2:72415696-72415715 Msa1267270:CDS 45.0%
! ATGGTGATTTGTGGCGTGAA+GGG + chr8_2:72416200-72416219 None:intergenic 45.0%
! AATGGTGATTTGTGGCGTGA+AGG + chr8_2:72416201-72416220 None:intergenic 45.0%
TGAAGATGGAAGATCAACGG+AGG - chr8_2:72416324-72416343 Msa1267270:intron 45.0%
ATGGAAGATCAACGGAGGTT+AGG - chr8_2:72416329-72416348 Msa1267270:intron 45.0%
TGGAAGATCAACGGAGGTTA+GGG - chr8_2:72416330-72416349 Msa1267270:intron 45.0%
GAGTGACAGATTTGAGAAGC+TGG - chr8_2:72416815-72416834 Msa1267270:intron 45.0%
TGACAGATTTGAGAAGCTGG+AGG - chr8_2:72416818-72416837 Msa1267270:intron 45.0%
! CTTGCGGCTTTGTCTTCTTA+AGG - chr8_2:72416854-72416873 Msa1267270:intron 45.0%
!!! TTTTTAATCATTTTATAAAT+CGG - chr8_2:72411605-72411624 Msa1267270:CDS 5.0%
!!! ATAAAGATTTTTTTTTTTTT+TGG - chr8_2:72412540-72412559 Msa1267270:CDS 5.0%
!!! TAAAGATTTTTTTTTTTTTT+GGG - chr8_2:72412541-72412560 Msa1267270:CDS 5.0%
AGAGGGAAAGAAAGGACAGC+TGG - chr8_2:72408890-72408909 Msa1267270:three_prime_UTR 50.0%
AAAGAAAGGACAGCTGGCTG+AGG - chr8_2:72408896-72408915 Msa1267270:three_prime_UTR 50.0%
!! GCTGAGGTGTTTGGTGTTCT+TGG - chr8_2:72408912-72408931 Msa1267270:three_prime_UTR 50.0%
!! CTCAGCTTATTTGGTGGTGG+TGG - chr8_2:72409031-72409050 Msa1267270:three_prime_UTR 50.0%
ATTTCGTTATTCGCCCTCCC+AGG - chr8_2:72409579-72409598 Msa1267270:intron 50.0%
ACTTTGCCACATACACAGGG+CGG - chr8_2:72410264-72410283 Msa1267270:intron 50.0%
TATAGTCCGCCCTGTGTATG+TGG + chr8_2:72410273-72410292 None:intergenic 50.0%
TGGTAGAACCTACCAAAGGC+AGG - chr8_2:72410333-72410352 Msa1267270:CDS 50.0%
TAGGGCAGATGCCAATGAAG+CGG - chr8_2:72410733-72410752 Msa1267270:intron 50.0%
GATGGAGACTATGTCAGCCT+TGG - chr8_2:72410821-72410840 Msa1267270:intron 50.0%
GAGACTATGTCAGCCTTGGT+TGG - chr8_2:72410825-72410844 Msa1267270:intron 50.0%
CCTCCCCCATAAACCTATAC+GGG + chr8_2:72411203-72411222 None:intergenic 50.0%
AGGTTTATGGGGGAGGTCAA+TGG - chr8_2:72411207-72411226 Msa1267270:intron 50.0%
GGTTTATGGGGGAGGTCAAT+GGG - chr8_2:72411208-72411227 Msa1267270:intron 50.0%
ATGCAACCAACCCCACTTAG+TGG - chr8_2:72411345-72411364 Msa1267270:intron 50.0%
TGCAACCAACCCCACTTAGT+GGG - chr8_2:72411346-72411365 Msa1267270:intron 50.0%
CTTATCCCACTAAGTGGGGT+TGG + chr8_2:72411354-72411373 None:intergenic 50.0%
GGTCTTCGGCTCCATAAAGA+AGG + chr8_2:72411830-72411849 None:intergenic 50.0%
! GTACCGTGAACTTTGGAAGC+CGG + chr8_2:72411935-72411954 None:intergenic 50.0%
GCAATACTTGGCATCCACAC+AGG + chr8_2:72411992-72412011 None:intergenic 50.0%
! AGCCTCTAGCTTGTAGGACT+TGG - chr8_2:72412149-72412168 Msa1267270:intron 50.0%
CACCAAGTCCTACAAGCTAG+AGG + chr8_2:72412154-72412173 None:intergenic 50.0%
TGGCTGTACAATACATGCGG+CGG - chr8_2:72412921-72412940 Msa1267270:intron 50.0%
ATGGCGACCATAATTCCTCC+CGG - chr8_2:72413415-72413434 Msa1267270:intron 50.0%
ATTGTGGCCGGGAGGAATTA+TGG + chr8_2:72413425-72413444 None:intergenic 50.0%
AGCTGCACTTATGAGAAGCC+TGG - chr8_2:72413773-72413792 Msa1267270:intron 50.0%
ACCTCTAATCATGTCTGGGG+CGG - chr8_2:72414012-72414031 Msa1267270:intron 50.0%
CTCCCCTGACTGATGTAGTA+GGG - chr8_2:72414394-72414413 Msa1267270:intron 50.0%
CACCCTACTACATCAGTCAG+GGG + chr8_2:72414399-72414418 None:intergenic 50.0%
GCACCCTACTACATCAGTCA+GGG + chr8_2:72414400-72414419 None:intergenic 50.0%
AGCACCGTTCAATGTGTAGG+AGG + chr8_2:72414844-72414863 None:intergenic 50.0%
! AGCTTTATGTAAGCCTGGCC+TGG - chr8_2:72415431-72415450 Msa1267270:CDS 50.0%
TGGGGCAGGTGTTCTTCATT+AGG - chr8_2:72415640-72415659 Msa1267270:CDS 50.0%
GGCAGGTGTTCTTCATTAGG+AGG - chr8_2:72415643-72415662 Msa1267270:CDS 50.0%
! TGGTGATTTGTGGCGTGAAG+GGG + chr8_2:72416199-72416218 None:intergenic 50.0%
!! ACACAGGGCGGACTATAACC+CGG - chr8_2:72410276-72410295 Msa1267270:intron 55.0%
GTGCAGCTCAAGAATGCCAG+AGG - chr8_2:72410481-72410500 Msa1267270:intron 55.0%
TCGGGGTCAGGCTTATCTGA+TGG - chr8_2:72410803-72410822 Msa1267270:intron 55.0%
TCGGGGTCAGGCTTATCTGA+TGG - chr8_2:72410803-72410822 Msa1267270:intron 55.0%
CCCGTATAGGTTTATGGGGG+AGG - chr8_2:72411200-72411219 Msa1267270:intron 55.0%
GGTCAATGGGCGCAGTTACT+AGG - chr8_2:72411221-72411240 Msa1267270:intron 55.0%
GCCGAAGACCCTTCTATTGC+TGG - chr8_2:72411840-72411859 Msa1267270:intron 55.0%
TCTGTGCGTGTATCCCTGTG+TGG - chr8_2:72411975-72411994 Msa1267270:intron 55.0%
GGCTGTACAATACATGCGGC+GGG - chr8_2:72412922-72412941 Msa1267270:intron 55.0%
!! GCGGCGGGTTATTGAGAAGA+AGG - chr8_2:72412937-72412956 Msa1267270:intron 55.0%
TAGAGACTTGAGGAGGACGG+AGG + chr8_2:72413485-72413504 None:intergenic 55.0%
ACTTGGTTCCGGTGTGGATG+AGG - chr8_2:72413548-72413567 Msa1267270:intron 55.0%
TCCGCCCCAGACATGATTAG+AGG + chr8_2:72414016-72414035 None:intergenic 55.0%
GCTCCCCTGACTGATGTAGT+AGG - chr8_2:72414393-72414412 Msa1267270:intron 55.0%
GGCACCCTACTACATCAGTC+AGG + chr8_2:72414401-72414420 None:intergenic 55.0%
GCACACTTGCGGCTTCATCA+GGG + chr8_2:72414540-72414559 None:intergenic 55.0%
TGCACACTTGCGGCTTCATC+AGG + chr8_2:72414541-72414560 None:intergenic 55.0%
TGATGAAGCCGCAAGTGTGC+AGG - chr8_2:72414540-72414559 Msa1267270:intron 55.0%
CGACATAAGAAAGCCAGGCC+AGG + chr8_2:72415447-72415466 None:intergenic 55.0%
GCGTGAAGGGGTGAAGTTTG+TGG + chr8_2:72416187-72416206 None:intergenic 55.0%
! GGACAGCTGGCTGAGGTGTT+TGG - chr8_2:72408903-72408922 Msa1267270:three_prime_UTR 60.0%
ACCCTTGACTTCTCGGGGTC+AGG - chr8_2:72410791-72410810 Msa1267270:intron 60.0%
GCCTGACCCCGAGAAGTCAA+GGG + chr8_2:72410795-72410814 None:intergenic 60.0%
AGCCTGACCCCGAGAAGTCA+AGG + chr8_2:72410796-72410815 None:intergenic 60.0%
ACCCTTGTCTTCTCGGGGTC+AGG - chr8_2:72410917-72410936 Msa1267270:intron 60.0%
GCCTGACCCCGAGAAGACAA+GGG + chr8_2:72410921-72410940 None:intergenic 60.0%
AGCCTGACCCCGAGAAGACA+AGG + chr8_2:72410922-72410941 None:intergenic 60.0%
AGGCTCTCAGCAGACGCTTG+CGG - chr8_2:72416838-72416857 Msa1267270:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 72408862 72417138 72408862 ID=Msa1267270;Name=Msa1267270
chr8_2 mRNA 72408862 72417138 72408862 ID=Msa1267270-mRNA-1;Parent=Msa1267270;Name=Msa1267270-mRNA-1;_AED=0.20;_eAED=0.20;_QI=427|0.92|0.92|1|0.92|0.85|14|230|501
chr8_2 exon 72408862 72409319 72408862 ID=Msa1267270-mRNA-1:exon:24545;Parent=Msa1267270-mRNA-1
chr8_2 exon 72410283 72410420 72410283 ID=Msa1267270-mRNA-1:exon:24544;Parent=Msa1267270-mRNA-1
chr8_2 exon 72411439 72411510 72411439 ID=Msa1267270-mRNA-1:exon:24543;Parent=Msa1267270-mRNA-1
chr8_2 exon 72411593 72411727 72411593 ID=Msa1267270-mRNA-1:exon:24542;Parent=Msa1267270-mRNA-1
chr8_2 exon 72412431 72412610 72412431 ID=Msa1267270-mRNA-1:exon:24541;Parent=Msa1267270-mRNA-1
chr8_2 exon 72412714 72412812 72412714 ID=Msa1267270-mRNA-1:exon:24540;Parent=Msa1267270-mRNA-1
chr8_2 exon 72413006 72413086 72413006 ID=Msa1267270-mRNA-1:exon:24539;Parent=Msa1267270-mRNA-1
chr8_2 exon 72414050 72414173 72414050 ID=Msa1267270-mRNA-1:exon:24538;Parent=Msa1267270-mRNA-1
chr8_2 exon 72414758 72414852 72414758 ID=Msa1267270-mRNA-1:exon:24537;Parent=Msa1267270-mRNA-1
chr8_2 exon 72415147 72415273 72415147 ID=Msa1267270-mRNA-1:exon:24536;Parent=Msa1267270-mRNA-1
chr8_2 exon 72415410 72415513 72415410 ID=Msa1267270-mRNA-1:exon:24535;Parent=Msa1267270-mRNA-1
chr8_2 exon 72415637 72415718 72415637 ID=Msa1267270-mRNA-1:exon:24534;Parent=Msa1267270-mRNA-1
chr8_2 exon 72416400 72416627 72416400 ID=Msa1267270-mRNA-1:exon:24533;Parent=Msa1267270-mRNA-1
chr8_2 exon 72416899 72417138 72416899 ID=Msa1267270-mRNA-1:exon:24532;Parent=Msa1267270-mRNA-1
chr8_2 five_prime_UTR 72416899 72417138 72416899 ID=Msa1267270-mRNA-1:five_prime_utr;Parent=Msa1267270-mRNA-1
chr8_2 five_prime_UTR 72416441 72416627 72416441 ID=Msa1267270-mRNA-1:five_prime_utr;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72416400 72416440 72416400 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72415637 72415718 72415637 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72415410 72415513 72415410 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72415147 72415273 72415147 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72414758 72414852 72414758 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72414050 72414173 72414050 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72413006 72413086 72413006 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72412714 72412812 72412714 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72412431 72412610 72412431 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72411593 72411727 72411593 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72411439 72411510 72411439 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72410283 72410420 72410283 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 CDS 72409092 72409319 72409092 ID=Msa1267270-mRNA-1:cds;Parent=Msa1267270-mRNA-1
chr8_2 three_prime_UTR 72408862 72409091 72408862 ID=Msa1267270-mRNA-1:three_prime_utr;Parent=Msa1267270-mRNA-1
Gene Sequence

>Msa1267270

ATGATTGAGCAATTCATCAATTTCGTTATTCGCCCTCCCAGGGCGGACTATAACCCGGATCAGTATCTGTGGGAAAAGGAATTCTCTCTTGCTGGTAGAACCTACCAAAGGCAGGATTTAGAGCTCAAGAATGCCAGAGGCTATACCTTGAAGTGTAGTCATTATCTCCCTTTTCCTTTTCCTGAAGATACTTCTCTTCCTTGTGTTATATATTGCCATGGAAACAGTGGATGTAGGGCAGATGCCAATGAAGCGGCTGTAATTCTCTTGCCATCAAATATTACTGTTTTTACCCTTGACTTCTCGGGGTCAGGCTTATCTGATGGAGACTATGTCAGCCTTGGTTGGCACGAAAAAGATGATCTGAAGATTGTGGTGTCGCATTTGAGGAGCAACAAACAAATATCCCGTATAGGTTTATGGGGGAGGTCAATGGGCGCAGTTACTAGCCTTCTTTATGGAGCCGAAGACCCTTCTATTGCTGGAATGGTATTGGATAGCGCCTTTTCAAACTTATATAATCTCATGATGGAGCTTGTGGACGTTTATAAAATCCGGCTTCCAAAGTTCACGGTTAAAATGGCTGTACAATACATGCGGCGGGTTATTGAGAAGAAGGCAAAGTTTGATATTATGAAATTGAACTGTGTTCTGGTTGCTCCGAAGACATTCATTCCTGTTTTATTTGGACATGCAAGTGATGACAAATTCATTCAGCCGCATCACTCTGATCTCATCTCAGAATCCTATGCGGGTGATAAAAATATCATTAAATTTGATGGCGACCATAATTCCTCCCGGCCACAATTCTTTTATGATTCAGTTTCCATTTTCTTCTACAATGTCCTCCGTCCTCCTCAAGTCTCTATTGCTGAAAAGCTCGAGAAATATTATGATTTAGGGGATTTGAAACTTGGTTCCGGTGTGGATGAGAGCGTATTATACGAGATTCTCTCTAGTCTGCGGTCTGCAACTACTGATGCTGCAAGTTCATCTTCTACATTTCCAACAATATCTGCAACAAAATCAGTTAGCGAACTTCTTTCAGAAGTTGCTCCCCTGACTGATGCACCCTTGCTTGAAGATGAAACTACAGATGACAATGATGGAATTGGCCCTGATGAAGCCGCAAGTGTGCAGGGCAAGCTAAATGGCCAGATTGAAGATTGTTGCTCATATACAAGCTCAAATAGAGAAAGTTGGGGCAGGTGTTCTTCATTAGGAGGCAGTGATCAAGAATTTTGTGCAGATTTAAGTGCTGATGATAAGCTCTCTCAGAATACTGTGAAGGTATTTGCAACACCTTTGCGAAGTATGAAAGAGAAATCATCAGACTCAAAAGAAGATGAAAAGAAGCCGAAGAAGGGTAAAAAGAAGAAGAAAAAAGCTGAAACGGTTGCAAAGAAACCAAAGAGTGACAGATTTGAGAAGCTGGAGGCTCTCAGCAGACGCTTGCGGCTTTGTCTTCTTAAGGGATCAACCCATCGAAGAAACAAGTCATCTTGA

Protein sequence

>Msa1267270

MIEQFINFVIRPPRADYNPDQYLWEKEFSLAGRTYQRQDLELKNARGYTLKCSHYLPFPFPEDTSLPCVIYCHGNSGCRADANEAAVILLPSNITVFTLDFSGSGLSDGDYVSLGWHEKDDLKIVVSHLRSNKQISRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSNLYNLMMELVDVYKIRLPKFTVKMAVQYMRRVIEKKAKFDIMKLNCVLVAPKTFIPVLFGHASDDKFIQPHHSDLISESYAGDKNIIKFDGDHNSSRPQFFYDSVSIFFYNVLRPPQVSIAEKLEKYYDLGDLKLGSGVDESVLYEILSSLRSATTDAASSSSTFPTISATKSVSELLSEVAPLTDAPLLEDETTDDNDGIGPDEAASVQGKLNGQIEDCCSYTSSNRESWGRCSSLGGSDQEFCADLSADDKLSQNTVKVFATPLRSMKEKSSDSKEDEKKPKKGKKKKKKAETVAKKPKSDRFEKLEALSRRLRLCLLKGSTHRRNKSS*