Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1172220 | XP_024638454.1 | 99.601 | 501 | 2 | 0 | 1 | 501 | 1 | 501 | 0.0 | 1029 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1172220 | sp|P54567|YQKD_BACSU | 28.631 | 241 | 147 | 8 | 36 | 266 | 56 | 281 | 2.36e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0792100 | Msa1172220 | 0.940952 | 9.657489e-101 | -8.615850e-47 |
Msa0269290 | Msa1172220 | 0.937188 | 5.193490e-98 | -8.615850e-47 |
Msa1172220 | Msa1267270 | 0.905654 | 3.415532e-80 | -8.615850e-47 |
Msa1172220 | Msa1441180 | 0.825399 | 4.788295e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1172220 | MtrunA17_Chr4g0076631 | 99.402 | 502 | 2 | 1 | 1 | 501 | 1 | 502 | 0.0 | 1024 |
Msa1172220 | MtrunA17_Chr2g0291031 | 68.263 | 501 | 119 | 5 | 1 | 501 | 1 | 461 | 0.0 | 638 |
Msa1172220 | MtrunA17_Chr4g0065941 | 68.792 | 298 | 90 | 1 | 2 | 299 | 1 | 295 | 3.50e-154 | 442 |
Msa1172220 | MtrunA17_Chr2g0287221 | 62.179 | 312 | 115 | 1 | 2 | 313 | 1 | 309 | 6.23e-146 | 429 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1172220 | AT4G17150.1 | 64.522 | 513 | 148 | 5 | 1 | 500 | 10 | 501 | 0.0 | 626 |
Msa1172220 | AT4G17150.4 | 71.182 | 406 | 106 | 4 | 1 | 398 | 10 | 412 | 0.0 | 558 |
Msa1172220 | AT4G17150.5 | 63.002 | 473 | 141 | 5 | 41 | 500 | 26 | 477 | 0.0 | 555 |
Msa1172220 | AT4G17150.3 | 76.796 | 362 | 82 | 1 | 1 | 360 | 10 | 371 | 0.0 | 549 |
Msa1172220 | AT4G17150.2 | 76.796 | 362 | 82 | 1 | 1 | 360 | 10 | 371 | 0.0 | 549 |
Msa1172220 | AT4G14290.2 | 71.429 | 287 | 82 | 0 | 2 | 288 | 1 | 287 | 5.96e-158 | 459 |
Msa1172220 | AT4G14290.1 | 71.429 | 287 | 82 | 0 | 2 | 288 | 1 | 287 | 8.94e-158 | 460 |
Msa1172220 | AT3G23540.1 | 67.657 | 303 | 95 | 1 | 2 | 301 | 1 | 303 | 1.30e-155 | 455 |
Msa1172220 | AT3G23540.3 | 69.091 | 275 | 82 | 1 | 30 | 301 | 2 | 276 | 1.66e-141 | 418 |
Msa1172220 | AT4G14290.5 | 72.532 | 233 | 64 | 0 | 56 | 288 | 1 | 233 | 2.23e-127 | 380 |
Msa1172220 | AT3G23540.2 | 67.500 | 160 | 49 | 1 | 145 | 301 | 1 | 160 | 3.40e-73 | 238 |
Msa1172220 | AT4G14290.3 | 70.714 | 140 | 41 | 0 | 149 | 288 | 33 | 172 | 1.14e-67 | 224 |
Msa1172220 | AT4G14290.4 | 70.803 | 137 | 40 | 0 | 152 | 288 | 1 | 137 | 3.82e-67 | 222 |
Find 152 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGAGGTGTTTGGTGTTCT+TGG | 0.142159 | 8_1:+2073417 | Msa1172220:five_prime_UTR |
GTGGGATTTAGCCTTCTTTA+TGG | 0.167652 | 8_1:+2076328 | Msa1172220:intron |
CTCGAGAAATATTATGATTT+AGG | 0.172301 | 8_1:+2078027 | Msa1172220:CDS |
AAATATCCCGTATAGGTTTA+TGG | 0.173583 | 8_1:+2075705 | Msa1172220:CDS |
TTTAGGAATTGCCAAATATT+TGG | 0.181328 | 8_1:+2081759 | Msa1172220:three_prime_UTR |
TTCTCCCAATTAGGTTAAAA+TGG | 0.185844 | 8_1:+2077412 | Msa1172220:intron |
ATACTTCTTCTCAGCTTATT+TGG | 0.201453 | 8_1:+2073527 | Msa1172220:five_prime_UTR |
TTGCTAACAAGCCAAATATT+TGG | 0.214997 | 8_1:-2081770 | None:intergenic |
CTTGCGGCTTTGTCTTCTTA+AGG | 0.270780 | 8_1:+2081504 | Msa1172220:CDS |
AATACTACCAATTTGACTTT+TGG | 0.273768 | 8_1:+2073922 | Msa1172220:five_prime_UTR |
GCCAATCAGAAACCAATATT+TGG | 0.276128 | 8_1:-2081689 | None:intergenic |
TTCTCAAATCTGTCACTCTT+TGG | 0.286897 | 8_1:-2081460 | None:intergenic |
TGCACACTTGCGGCTTCATC+AGG | 0.294214 | 8_1:-2079049 | None:intergenic |
TCGAGAAATATTATGATTTA+GGG | 0.306533 | 8_1:+2078028 | Msa1172220:CDS |
GAGGACATTGTAGAAGAAAA+TGG | 0.307349 | 8_1:-2077974 | None:intergenic |
AGTTGTGAAGAAAGAGAGAT+TGG | 0.308468 | 8_1:+2073945 | Msa1172220:five_prime_UTR |
CACAACTCCAAAAGTCAAAT+TGG | 0.322947 | 8_1:-2073929 | None:intergenic |
TGGGGCAGGTGTTCTTCATT+AGG | 0.330333 | 8_1:+2080151 | Msa1172220:CDS |
TTCTATTGCTGGAATGGTAT+TGG | 0.336375 | 8_1:+2076363 | Msa1172220:CDS |
TTGCGGCTTTGTCTTCTTAA+GGG | 0.349769 | 8_1:+2081505 | Msa1172220:CDS |
ACCCTTGACTTCTCGGGGTC+AGG | 0.351572 | 8_1:+2075302 | Msa1172220:CDS |
GCCAAATATTGGTTTCTGAT+TGG | 0.356584 | 8_1:+2081688 | Msa1172220:three_prime_UTR |
GAGAATTACAGCCGCTTCAT+TGG | 0.360136 | 8_1:-2075255 | None:intergenic |
AATATCCCGTATAGGTTTAT+GGG | 0.365038 | 8_1:+2075706 | Msa1172220:CDS |
AATACCATTCCAGCAATAGA+AGG | 0.376973 | 8_1:-2076361 | None:intergenic |
GCCGAAGACCCTTCTATTGC+TGG | 0.379355 | 8_1:+2076352 | Msa1172220:CDS |
AAGCTCAAATAGAGAAAGTT+GGG | 0.381819 | 8_1:+2080132 | Msa1172220:CDS |
TTATATATTGCCATGGAAAC+AGG | 0.382845 | 8_1:+2075080 | Msa1172220:CDS |
ATTACAATTAGATTGACTAT+TGG | 0.394016 | 8_1:-2081587 | None:intergenic |
AAATAAGCTGAGAAGAAGTA+TGG | 0.398646 | 8_1:-2073525 | None:intergenic |
TATGAAATTGAACTGTGTTC+TGG | 0.398736 | 8_1:+2077484 | Msa1172220:CDS |
CTACCAAAGGCAGGATTTAG+AGG | 0.404625 | 8_1:+2074853 | Msa1172220:CDS |
GAAAAGGAATTCTCTCTTGC+TGG | 0.411836 | 8_1:+2074824 | Msa1172220:CDS |
CGAAATGAAATGAAATGAAA+AGG | 0.413453 | 8_1:-2073584 | None:intergenic |
GATTTAGGGGATTTGAAACT+TGG | 0.415584 | 8_1:+2078042 | Msa1172220:CDS |
TGGTGTTCTTGGAATTGAAT+TGG | 0.420124 | 8_1:+2073428 | Msa1172220:five_prime_UTR |
ACAGATGACAATGATGGAAT+TGG | 0.425584 | 8_1:+2079025 | Msa1172220:CDS |
GGTCAATGGGCGCAGTTACT+AGG | 0.428894 | 8_1:+2075732 | Msa1172220:CDS |
TTGCCTCTAAATCCTGCCTT+TGG | 0.430450 | 8_1:-2074856 | None:intergenic |
TTGTGGACGTTTATAAAATC+CGG | 0.430844 | 8_1:+2076425 | Msa1172220:CDS |
GTATCTTCAGGAAAAGGAAA+AGG | 0.432727 | 8_1:-2075043 | None:intergenic |
GGGGATTTGAAACTTGGTTC+CGG | 0.432780 | 8_1:+2078048 | Msa1172220:CDS |
CTTGCATGTCCAAATAAAAC+AGG | 0.434305 | 8_1:-2077720 | None:intergenic |
CTCAGCTTATTTGGTGGTGG+TGG | 0.435731 | 8_1:+2073536 | Msa1172220:five_prime_UTR |
GGACAGCTGGCTGAGGTGTT+TGG | 0.436350 | 8_1:+2073408 | Msa1172220:five_prime_UTR |
CTTCTCAGCTTATTTGGTGG+TGG | 0.438281 | 8_1:+2073533 | Msa1172220:five_prime_UTR |
GAGTGACAGATTTGAGAAGC+TGG | 0.441559 | 8_1:+2081465 | Msa1172220:CDS |
AGAGAGAGTACCGTGAACTT+TGG | 0.446970 | 8_1:-2076451 | None:intergenic |
AGATGACTTGTTTCTTCGAT+GGG | 0.453630 | 8_1:-2081533 | None:intergenic |
AGAGAAGTATCTTCAGGAAA+AGG | 0.459180 | 8_1:-2075049 | None:intergenic |
CTTCTTCTCAGCTTATTTGG+TGG | 0.459744 | 8_1:+2073530 | Msa1172220:five_prime_UTR |
ATGAGCAACAATCTTCAATC+TGG | 0.460440 | 8_1:-2080105 | None:intergenic |
GGCACCCTACTACATCAGTC+AGG | 0.465060 | 8_1:-2078909 | None:intergenic |
AAGATGACTTGTTTCTTCGA+TGG | 0.466764 | 8_1:-2081534 | None:intergenic |
CAAGGAAGAGAAGTATCTTC+AGG | 0.469007 | 8_1:-2075055 | None:intergenic |
CAAGCTCAAATAGAGAAAGT+TGG | 0.469326 | 8_1:+2080131 | Msa1172220:CDS |
GAGATAATGACTACACTTCA+AGG | 0.474252 | 8_1:-2075020 | None:intergenic |
TTTCCCACAGATACTGATCC+GGG | 0.477800 | 8_1:-2074805 | None:intergenic |
AAAACAGGAATGAATGTCTT+CGG | 0.479091 | 8_1:-2077705 | None:intergenic |
TCCAGCAATAGAAGGGTCTT+CGG | 0.485556 | 8_1:-2076353 | None:intergenic |
GAGATTATATAAGTTTGAAA+AGG | 0.488604 | 8_1:-2076392 | None:intergenic |
AAAAGAATAAATTGATAAGA+GGG | 0.488945 | 8_1:+2073378 | Msa1172220:five_prime_UTR |
ATTGTGGCCGGGAGGAATTA+TGG | 0.491620 | 8_1:-2077933 | None:intergenic |
TGATGAAGCCGCAAGTGTGC+AGG | 0.493167 | 8_1:+2079051 | Msa1172220:CDS |
GAGAAGAAGTATGGTTAGAG+AGG | 0.493381 | 8_1:-2073516 | None:intergenic |
AAAACACAAATTTCGTGTGT+AGG | 0.494347 | 8_1:+2081616 | Msa1172220:three_prime_UTR |
AACAAACAAATATCCCGTAT+AGG | 0.496030 | 8_1:+2075698 | Msa1172220:CDS |
GAAATGAAATGAAATGAAAA+GGG | 0.497133 | 8_1:-2073583 | None:intergenic |
TAATGATAACAGCGAAATGA+AGG | 0.502100 | 8_1:-2081711 | None:intergenic |
CTCTAAATCCTGCCTTTGGT+AGG | 0.502347 | 8_1:-2074852 | None:intergenic |
TGCTGATGATAAGCTCTCTC+AGG | 0.502510 | 8_1:+2080207 | Msa1172220:CDS |
AATTGATAAGAGGGAAAGAA+AGG | 0.506532 | 8_1:+2073387 | Msa1172220:five_prime_UTR |
TGGTAGCTTAGCTCAGACTT+TGG | 0.510902 | 8_1:+2073556 | Msa1172220:five_prime_UTR |
TTAAATGATGCAGTGGATGT+AGG | 0.518787 | 8_1:+2075225 | Msa1172220:intron |
AGATGAAAAGAAGCCGAAGA+AGG | 0.519297 | 8_1:+2081396 | Msa1172220:CDS |
AGACCCTTCTATTGCTGGAA+TGG | 0.522988 | 8_1:+2076357 | Msa1172220:CDS |
GAAACTACAGATGACAATGA+TGG | 0.526697 | 8_1:+2079019 | Msa1172220:CDS |
GGATCAGTATCTGTGGGAAA+AGG | 0.529501 | 8_1:+2074808 | Msa1172220:CDS |
ATTTCGTTATTCGCCCTCCC+AGG | 0.531333 | 8_1:+2074089 | Msa1172220:CDS |
ATCATAAAAGAATTGTGGCC+GGG | 0.532049 | 8_1:-2077944 | None:intergenic |
AGATTGTGGTGTCGCATTTG+AGG | 0.532944 | 8_1:+2075672 | Msa1172220:CDS |
AAGAATAATAATACCTGGGA+GGG | 0.533025 | 8_1:-2074102 | None:intergenic |
TCGGGGTCAGGCTTATCTGA+TGG | 0.533663 | 8_1:+2075314 | Msa1172220:CDS |
GCGGCGGGTTATTGAGAAGA+AGG | 0.534978 | 8_1:+2077448 | Msa1172220:CDS |
TATCTTCAGGAAAAGGAAAA+GGG | 0.536605 | 8_1:-2075042 | None:intergenic |
GGCAGGTGTTCTTCATTAGG+AGG | 0.539678 | 8_1:+2080154 | Msa1172220:CDS |
CCTTGTGTTATATATTGCCA+TGG | 0.540136 | 8_1:+2075073 | Msa1172220:CDS |
GATGAAAAGAAGCCGAAGAA+GGG | 0.543208 | 8_1:+2081397 | Msa1172220:CDS |
GTATCTATCTTATAGCCACT+TGG | 0.543355 | 8_1:-2074044 | None:intergenic |
TGTAGTTTCATCTTCAAGCA+AGG | 0.545400 | 8_1:-2079005 | None:intergenic |
GTACCGTGAACTTTGGAAGC+CGG | 0.545459 | 8_1:-2076444 | None:intergenic |
AGCCTGACCCCGAGAAGTCA+AGG | 0.546559 | 8_1:-2075304 | None:intergenic |
AAACTTATATAATCTCATGA+TGG | 0.546998 | 8_1:+2076399 | Msa1172220:CDS |
TAATCTCATGATGGAGCTTG+TGG | 0.547533 | 8_1:+2076408 | Msa1172220:CDS |
ACTTGGTTCCGGTGTGGATG+AGG | 0.547607 | 8_1:+2078059 | Msa1172220:CDS |
TTCTCTTTCATACTTCGCAA+AGG | 0.549432 | 8_1:-2081355 | None:intergenic |
AATCATAAAAGAATTGTGGC+CGG | 0.549501 | 8_1:-2077945 | None:intergenic |
GTAACACATACCTGTTTCCA+TGG | 0.551077 | 8_1:-2075090 | None:intergenic |
GTATTAAATTAATACCGCAT+AGG | 0.557960 | 8_1:-2077790 | None:intergenic |
AGGCTCTCAGCAGACGCTTG+CGG | 0.561762 | 8_1:+2081488 | Msa1172220:CDS |
GGCTGTACAATACATGCGGC+GGG | 0.564086 | 8_1:+2077433 | Msa1172220:CDS |
AGAGGGAAAGAAAGGACAGC+TGG | 0.565313 | 8_1:+2073395 | Msa1172220:five_prime_UTR |
TATGATATGATATACAAAAG+AGG | 0.565995 | 8_1:-2081559 | None:intergenic |
ATATCCCGTATAGGTTTATG+GGG | 0.567406 | 8_1:+2075707 | Msa1172220:CDS |
TAAATGATGCAGTGGATGTA+GGG | 0.568274 | 8_1:+2075226 | Msa1172220:intron |
CAAATAGAGAAAGTTGGGGC+AGG | 0.573325 | 8_1:+2080137 | Msa1172220:CDS |
ACTGAATCATAAAAGAATTG+TGG | 0.574633 | 8_1:-2077949 | None:intergenic |
ATGGCGACCATAATTCCTCC+CGG | 0.574950 | 8_1:+2077926 | Msa1172220:CDS |
ACACTTCAAGGTATAGCCTC+TGG | 0.577166 | 8_1:-2075008 | None:intergenic |
GTAGTTTCATCTTCAAGCAA+GGG | 0.578611 | 8_1:-2079004 | None:intergenic |
GGTCTTCGGCTCCATAAAGA+AGG | 0.579635 | 8_1:-2076339 | None:intergenic |
AAAGAAAGGACAGCTGGCTG+AGG | 0.581463 | 8_1:+2073401 | Msa1172220:five_prime_UTR |
GATGGAGACTATGTCAGCCT+TGG | 0.581558 | 8_1:+2075332 | Msa1172220:CDS |
GCACCCTACTACATCAGTCA+GGG | 0.585755 | 8_1:-2078908 | None:intergenic |
ATGAAATGAAATGAAAAGGG+TGG | 0.589383 | 8_1:-2073580 | None:intergenic |
GAAAGATGATCTGAAGATTG+TGG | 0.598855 | 8_1:+2075658 | Msa1172220:intron |
AATCCGGCTTCCAAAGTTCA+CGG | 0.601063 | 8_1:+2076441 | Msa1172220:CDS |
TGGTAGAACCTACCAAAGGC+AGG | 0.601644 | 8_1:+2074844 | Msa1172220:CDS |
TGAAATGAAATGAAAAGGGT+GGG | 0.607773 | 8_1:-2073579 | None:intergenic |
GAGACTATGTCAGCCTTGGT+TGG | 0.607802 | 8_1:+2075336 | Msa1172220:CDS |
AAAGATAACCTGCACACTTG+CGG | 0.608984 | 8_1:-2079059 | None:intergenic |
CGAGAAATATTATGATTTAG+GGG | 0.610738 | 8_1:+2078029 | Msa1172220:CDS |
AACTTACTTCGTGCCAACCA+AGG | 0.612981 | 8_1:-2075349 | None:intergenic |
GCACACTTGCGGCTTCATCA+GGG | 0.613086 | 8_1:-2079048 | None:intergenic |
TTTGAAACTTGGTTCCGGTG+TGG | 0.615743 | 8_1:+2078053 | Msa1172220:CDS |
ATACCATTCCAGCAATAGAA+GGG | 0.616504 | 8_1:-2076360 | None:intergenic |
CCATGGCAATATATAACACA+AGG | 0.617756 | 8_1:-2075073 | None:intergenic |
CAATAGAGACTTGAGGAGGA+CGG | 0.628343 | 8_1:-2077996 | None:intergenic |
ATTCATTTCATGACGCCAAG+TGG | 0.629844 | 8_1:+2074029 | Msa1172220:five_prime_UTR |
CTTAGCTTACAATTAGAGTG+AGG | 0.631339 | 8_1:-2074003 | None:intergenic |
GTTAAATACCTCATCCACAC+CGG | 0.635215 | 8_1:-2078067 | None:intergenic |
TGGCTGTACAATACATGCGG+CGG | 0.639633 | 8_1:+2077432 | Msa1172220:CDS |
TCAGCAATAGAGACTTGAGG+AGG | 0.640185 | 8_1:-2078000 | None:intergenic |
GCCTGACCCCGAGAAGTCAA+GGG | 0.640197 | 8_1:-2075303 | None:intergenic |
TAGGGCAGATGCCAATGAAG+CGG | 0.642371 | 8_1:+2075244 | Msa1172220:CDS |
ATAACCCGGATCAGTATCTG+TGG | 0.647394 | 8_1:+2074801 | Msa1172220:CDS |
ACACAGGGCGGACTATAACC+CGG | 0.648856 | 8_1:+2074787 | Msa1172220:intron |
GTCATGTCAGAATACTGTGA+AGG | 0.652766 | 8_1:+2081321 | Msa1172220:intron |
ACGAGATTCTCTCTAGTCTG+CGG | 0.652977 | 8_1:+2078794 | Msa1172220:CDS |
AAAGAATAATAATACCTGGG+AGG | 0.656822 | 8_1:-2074103 | None:intergenic |
TGACAGATTTGAGAAGCTGG+AGG | 0.661868 | 8_1:+2081468 | Msa1172220:CDS |
TAACCCGGATCAGTATCTGT+GGG | 0.666671 | 8_1:+2074802 | Msa1172220:CDS |
AGCTCAAATAGAGAAAGTTG+GGG | 0.674107 | 8_1:+2080133 | Msa1172220:CDS |
AAATGGCTGTACAATACATG+CGG | 0.675349 | 8_1:+2077429 | Msa1172220:CDS |
TTGCTGGTAGAACCTACCAA+AGG | 0.679162 | 8_1:+2074840 | Msa1172220:CDS |
CACCCTACTACATCAGTCAG+GGG | 0.681270 | 8_1:-2078907 | None:intergenic |
GTGCAGCTCAAGAATGCCAG+AGG | 0.686724 | 8_1:+2074992 | Msa1172220:intron |
ATAAAAGAATTGTGGCCGGG+AGG | 0.694195 | 8_1:-2077941 | None:intergenic |
TAGAGACTTGAGGAGGACGG+AGG | 0.699920 | 8_1:-2077993 | None:intergenic |
TATCCCGTATAGGTTTATGG+GGG | 0.742479 | 8_1:+2075708 | Msa1172220:CDS |
GAGATGAGATCAGAGTGATG+CGG | 0.757183 | 8_1:-2077762 | None:intergenic |
TCTCATCTCAGAATCCTATG+CGG | 0.772408 | 8_1:+2077776 | Msa1172220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGATTAAGATTTTATTT+TGG | + | chr8_1:2076774-2076793 | Msa1172220:intron | 10.0% |
!! | AAAAATATCATTAAATTTGA+TGG | + | chr8_1:2077907-2077926 | Msa1172220:CDS | 10.0% |
!! | AAAGTAACAATAATAATTTA+TGG | - | chr8_1:2078658-2078677 | None:intergenic | 10.0% |
!! | AATTATATTGTAATTATGTT+AGG | - | chr8_1:2080545-2080564 | None:intergenic | 10.0% |
!! | AAAAAAGGAAAAAAAAAAAA+AGG | + | chr8_1:2080694-2080713 | Msa1172220:intron | 10.0% |
!! | AAAAAGAATAAATTGATAAG+AGG | + | chr8_1:2073377-2073396 | Msa1172220:five_prime_UTR | 15.0% |
!! | AAAAGAATAAATTGATAAGA+GGG | + | chr8_1:2073378-2073397 | Msa1172220:five_prime_UTR | 15.0% |
!! | AAAAAAGAATAATAATACCT+GGG | - | chr8_1:2074109-2074128 | None:intergenic | 15.0% |
!! | TAAAAAAGAATAATAATACC+TGG | - | chr8_1:2074110-2074129 | None:intergenic | 15.0% |
!!! | TCTTTTTTATTCATCAAATT+TGG | + | chr8_1:2074121-2074140 | Msa1172220:intron | 15.0% |
!!! | AAAACTTTTTGAAATAGTAT+GGG | - | chr8_1:2074542-2074561 | None:intergenic | 15.0% |
!! | AAGTTAGATAGAAATATATA+TGG | + | chr8_1:2075800-2075819 | Msa1172220:intron | 15.0% |
!! | AAATTGTTAAAACAAAAGTT+GGG | + | chr8_1:2076839-2076858 | Msa1172220:intron | 15.0% |
!!! | CAAAGAACATAATTTTTTTT+GGG | - | chr8_1:2078146-2078165 | None:intergenic | 15.0% |
!!! | ACAAAGAACATAATTTTTTT+TGG | - | chr8_1:2078147-2078166 | None:intergenic | 15.0% |
!! | TAAAATTGAAGATATTAACT+TGG | + | chr8_1:2078402-2078421 | Msa1172220:intron | 15.0% |
!! | AAAATGGAAAAACAAAAAAA+AGG | + | chr8_1:2078469-2078488 | Msa1172220:intron | 15.0% |
!! | AACATTATCATGATTATATA+TGG | + | chr8_1:2078596-2078615 | Msa1172220:intron | 15.0% |
!!! | TTATTATTGTTACTTTTTTG+TGG | + | chr8_1:2078662-2078681 | Msa1172220:intron | 15.0% |
!!! | TTTTATATTAGTATGGTTTT+AGG | + | chr8_1:2078690-2078709 | Msa1172220:intron | 15.0% |
!!! | AACTAAATAGAAAGTTTTTT+TGG | - | chr8_1:2078960-2078979 | None:intergenic | 15.0% |
!! | TAAAATATAATTCACGAAAT+CGG | - | chr8_1:2079433-2079452 | None:intergenic | 15.0% |
!! | ATGCTAAAATTATAAAAATG+TGG | - | chr8_1:2080034-2080053 | None:intergenic | 15.0% |
!!! | TTTTTTTCCTTTTTTAGTTT+TGG | - | chr8_1:2080689-2080708 | None:intergenic | 15.0% |
!! | GAAATGAAATGAAATGAAAA+GGG | - | chr8_1:2073586-2073605 | None:intergenic | 20.0% |
!!! | CTTTTCATTTCATTTCATTT+CGG | + | chr8_1:2073585-2073604 | Msa1172220:five_prime_UTR | 20.0% |
!!! | ACTACTACTTTTTCATTTTT+CGG | + | chr8_1:2073837-2073856 | Msa1172220:intron | 20.0% |
!!! | ATTTTAATAAGCTATATTGG+AGG | - | chr8_1:2074263-2074282 | None:intergenic | 20.0% |
!!! | GGTATTTTAATAAGCTATAT+TGG | - | chr8_1:2074266-2074285 | None:intergenic | 20.0% |
!!! | AAACATCATATTAACTTGTT+TGG | - | chr8_1:2074405-2074424 | None:intergenic | 20.0% |
!!! | ATGTTTATCTTCTTTTGATT+TGG | + | chr8_1:2074471-2074490 | Msa1172220:intron | 20.0% |
!!! | AAACTTTTTGAAATAGTATG+GGG | - | chr8_1:2074541-2074560 | None:intergenic | 20.0% |
!!! | CAAAACTTTTTGAAATAGTA+TGG | - | chr8_1:2074543-2074562 | None:intergenic | 20.0% |
!!! | CATACTATTTCAAAAAGTTT+TGG | + | chr8_1:2074541-2074560 | Msa1172220:intron | 20.0% |
!!! | AGTATCGAGTATTTATTTTA+TGG | + | chr8_1:2074878-2074897 | Msa1172220:intron | 20.0% |
!!! | GTATCGAGTATTTATTTTAT+GGG | + | chr8_1:2074879-2074898 | Msa1172220:intron | 20.0% |
!! | GTAAAAACAGTAATATTTGA+TGG | - | chr8_1:2075284-2075303 | None:intergenic | 20.0% |
!!! | ATTAAGAATTTATGCTGTTT+TGG | + | chr8_1:2075908-2075927 | Msa1172220:intron | 20.0% |
!!! | AATATTTTTGTTTCAAACAC+AGG | - | chr8_1:2076097-2076116 | None:intergenic | 20.0% |
!! | GAGATTATATAAGTTTGAAA+AGG | - | chr8_1:2076395-2076414 | None:intergenic | 20.0% |
!! | AAACTTATATAATCTCATGA+TGG | + | chr8_1:2076399-2076418 | Msa1172220:CDS | 20.0% |
!!! | TTCAAGTCTTTTACAATAAA+GGG | - | chr8_1:2076532-2076551 | None:intergenic | 20.0% |
!!! | TTTCAAGTCTTTTACAATAA+AGG | - | chr8_1:2076533-2076552 | None:intergenic | 20.0% |
!!! | TAATTTCCTTTTTGTTAAGA+TGG | + | chr8_1:2076707-2076726 | Msa1172220:intron | 20.0% |
!!! | TAAGATTTTATTTTGGATCT+AGG | + | chr8_1:2076781-2076800 | Msa1172220:intron | 20.0% |
!!! | AAGATTTTATTTTGGATCTA+GGG | + | chr8_1:2076782-2076801 | Msa1172220:intron | 20.0% |
!!! | AATTATAGCTCTTTTTTACT+AGG | + | chr8_1:2076816-2076835 | Msa1172220:intron | 20.0% |
!! | GAAATTGTTAAAACAAAAGT+TGG | + | chr8_1:2076838-2076857 | Msa1172220:intron | 20.0% |
!! | AATTGTTAAAACAAAAGTTG+GGG | + | chr8_1:2076840-2076859 | Msa1172220:intron | 20.0% |
!! | ATTATTAATCATGACAAGTT+TGG | + | chr8_1:2076864-2076883 | Msa1172220:intron | 20.0% |
!!! | GAATATACTTTTATTTTGCA+TGG | + | chr8_1:2076901-2076920 | Msa1172220:intron | 20.0% |
!! | AACTAGTATCATGTATAATT+AGG | + | chr8_1:2076998-2077017 | Msa1172220:intron | 20.0% |
!! | AAAAAAATCTTTATGCATTG+TGG | - | chr8_1:2077046-2077065 | None:intergenic | 20.0% |
!! | TATATAGTTGTATACCAATT+TGG | - | chr8_1:2077145-2077164 | None:intergenic | 20.0% |
!!! | TGATTTTATAACTTTTATGC+TGG | + | chr8_1:2077289-2077308 | Msa1172220:intron | 20.0% |
!!! | GCATTAATTTAAGATAGAAA+TGG | - | chr8_1:2077664-2077683 | None:intergenic | 20.0% |
!!! | TAAACAGAAGTTAGATATTT+TGG | - | chr8_1:2077870-2077889 | None:intergenic | 20.0% |
!! | TCGAGAAATATTATGATTTA+GGG | + | chr8_1:2078028-2078047 | Msa1172220:CDS | 20.0% |
!! | ACATTTAACTAAATTCTTTG+AGG | - | chr8_1:2078311-2078330 | None:intergenic | 20.0% |
!! | TTATCCATTACTTATAATGT+AGG | + | chr8_1:2078979-2078998 | Msa1172220:intron | 20.0% |
!! | TACATGTAAAATAAAATTCC+TGG | - | chr8_1:2079115-2079134 | None:intergenic | 20.0% |
!!! | AGGAATTTTATTTTACATGT+AGG | + | chr8_1:2079114-2079133 | Msa1172220:intron | 20.0% |
!! | AGTAAATAAAATACTAGCAA+AGG | - | chr8_1:2079407-2079426 | None:intergenic | 20.0% |
!! | TTAAGAAAAGTTAATCTCAA+AGG | - | chr8_1:2079590-2079609 | None:intergenic | 20.0% |
!! | GAGTAGTTTATTATAAGAAA+AGG | + | chr8_1:2079835-2079854 | Msa1172220:intron | 20.0% |
!!! | AAAGTATTTTTTCTCAAATG+CGG | - | chr8_1:2081159-2081178 | None:intergenic | 20.0% |
!! | TATGATATGATATACAAAAG+AGG | - | chr8_1:2081562-2081581 | None:intergenic | 20.0% |
!! | ATTACAATTAGATTGACTAT+TGG | - | chr8_1:2081590-2081609 | None:intergenic | 20.0% |
! | CGAAATGAAATGAAATGAAA+AGG | - | chr8_1:2073587-2073606 | None:intergenic | 25.0% |
!! | TTTTCGACTTTAATCTTTCT+TGG | - | chr8_1:2073679-2073698 | None:intergenic | 25.0% |
! | ACAAGCAAGTTTATGAAATA+TGG | - | chr8_1:2073759-2073778 | None:intergenic | 25.0% |
!!! | TCAATGTCATACTACTTTTA+AGG | + | chr8_1:2073794-2073813 | Msa1172220:intron | 25.0% |
!!! | CAATGTCATACTACTTTTAA+GGG | + | chr8_1:2073795-2073814 | Msa1172220:intron | 25.0% |
!!! | CTACTACTTTTTCATTTTTC+GGG | + | chr8_1:2073838-2073857 | Msa1172220:intron | 25.0% |
!!! | AATACTACCAATTTGACTTT+TGG | + | chr8_1:2073922-2073941 | Msa1172220:five_prime_UTR | 25.0% |
! | TAAGATAAGCTACTCAAATA+AGG | - | chr8_1:2074151-2074170 | None:intergenic | 25.0% |
! | AAACAATCTCACAAAACTTA+TGG | - | chr8_1:2074176-2074195 | None:intergenic | 25.0% |
!!! | ATAAGTTTTGTGAGATTGTT+TGG | + | chr8_1:2074175-2074194 | Msa1172220:intron | 25.0% |
!!! | CATAAGCTATTTTATAGCAA+AGG | - | chr8_1:2074327-2074346 | None:intergenic | 25.0% |
! | ATAATGAGAACTATCTAACA+TGG | - | chr8_1:2074605-2074624 | None:intergenic | 25.0% |
! | CAATTATTGTTGCCTATATA+TGG | + | chr8_1:2074908-2074927 | Msa1172220:intron | 25.0% |
! | AAATAAACACATTCACAAAG+AGG | - | chr8_1:2075376-2075395 | None:intergenic | 25.0% |
! | TATGTCATATTATCCTTAGT+TGG | + | chr8_1:2075467-2075486 | Msa1172220:intron | 25.0% |
! | CAAAAAACACATTCATAAAG+AGG | - | chr8_1:2075507-2075526 | None:intergenic | 25.0% |
! | TAAATCGGAAAAACATAAAG+CGG | + | chr8_1:2076131-2076150 | Msa1172220:intron | 25.0% |
! | ATGTATACAGAGAAAATGTA+AGG | - | chr8_1:2076254-2076273 | None:intergenic | 25.0% |
! | TACTTTCCATCTTAACAAAA+AGG | - | chr8_1:2076716-2076735 | None:intergenic | 25.0% |
! | AAGATGGAAAGTAAAGAAAA+AGG | + | chr8_1:2076723-2076742 | Msa1172220:intron | 25.0% |
! | AAGTATATTCTTCAATCCTA+GGG | - | chr8_1:2076752-2076771 | None:intergenic | 25.0% |
! | TAAGTATATTCTTCAATCCT+AGG | - | chr8_1:2076753-2076772 | None:intergenic | 25.0% |
! | AAAAGAGCTATAATTATGAG+AGG | - | chr8_1:2076811-2076830 | None:intergenic | 25.0% |
!!! | ATTTTGCATGGTTGTTTTTA+AGG | + | chr8_1:2076913-2076932 | Msa1172220:intron | 25.0% |
!!! | TTTTGCATGGTTGTTTTTAA+GGG | + | chr8_1:2076914-2076933 | Msa1172220:intron | 25.0% |
!!! | TGAACTATTTTTTAAGCTGT+AGG | + | chr8_1:2077079-2077098 | Msa1172220:intron | 25.0% |
! | AGCTGAAAATCAAAATATGT+GGG | - | chr8_1:2077115-2077134 | None:intergenic | 25.0% |
! | GTATACAACTATATATGCAT+TGG | + | chr8_1:2077150-2077169 | Msa1172220:intron | 25.0% |
!!! | TATGCATTGGATTTACTTTT+AGG | + | chr8_1:2077163-2077182 | Msa1172220:intron | 25.0% |
! | TCATTCAATCAAACAATACA+CGG | - | chr8_1:2077227-2077246 | None:intergenic | 25.0% |
! | AAACAAAATATGATCGATGA+AGG | - | chr8_1:2077567-2077586 | None:intergenic | 25.0% |
!!! | ACATTCATTCCTGTTTTATT+TGG | + | chr8_1:2077711-2077730 | Msa1172220:CDS | 25.0% |
! | GTATTAAATTAATACCGCAT+AGG | - | chr8_1:2077793-2077812 | None:intergenic | 25.0% |
!!! | GTTAGATATTTTGGCTATTA+AGG | - | chr8_1:2077861-2077880 | None:intergenic | 25.0% |
! | ACTTCTGTTTATGAATTTGT+AGG | + | chr8_1:2077879-2077898 | Msa1172220:intron | 25.0% |
! | CTTCTGTTTATGAATTTGTA+GGG | + | chr8_1:2077880-2077899 | Msa1172220:intron | 25.0% |
! | ACTGAATCATAAAAGAATTG+TGG | - | chr8_1:2077952-2077971 | None:intergenic | 25.0% |
! | CTCGAGAAATATTATGATTT+AGG | + | chr8_1:2078027-2078046 | Msa1172220:CDS | 25.0% |
! | CGAGAAATATTATGATTTAG+GGG | + | chr8_1:2078029-2078048 | Msa1172220:CDS | 25.0% |
! | TTATTTGTGAACTAACGAAA+TGG | + | chr8_1:2078336-2078355 | Msa1172220:intron | 25.0% |
! | AATGTTTCCAAAAACTGAAA+TGG | - | chr8_1:2078582-2078601 | None:intergenic | 25.0% |
!!! | GGCATTGTTTTATATTAGTA+TGG | + | chr8_1:2078683-2078702 | Msa1172220:intron | 25.0% |
! | AAAAAATAGACAGAAGGTTA+AGG | - | chr8_1:2078933-2078952 | None:intergenic | 25.0% |
! | TTGTCTGTGAAATTAAGAAA+TGG | + | chr8_1:2079088-2079107 | Msa1172220:intron | 25.0% |
!! | AAACTGCAAATGCAATTTTA+AGG | + | chr8_1:2079472-2079491 | Msa1172220:intron | 25.0% |
!!! | TGCAATTTTAAGGTTACTTT+CGG | + | chr8_1:2079482-2079501 | Msa1172220:intron | 25.0% |
! | AAAACTAAGTCTTGATTGAA+TGG | + | chr8_1:2079773-2079792 | Msa1172220:intron | 25.0% |
! | AAACTAAGTCTTGATTGAAT+GGG | + | chr8_1:2079774-2079793 | Msa1172220:intron | 25.0% |
!! | TTTCATTAGTAGACTTTTTG+TGG | + | chr8_1:2079804-2079823 | Msa1172220:intron | 25.0% |
!!! | TTTTAAGTGTTGTTTTACTC+TGG | + | chr8_1:2079900-2079919 | Msa1172220:intron | 25.0% |
!! | TTGACCATTAATGACTTTTA+GGG | + | chr8_1:2080070-2080089 | Msa1172220:intron | 25.0% |
! | TATGTGTGTAAAAAGTGAAA+CGG | - | chr8_1:2080302-2080321 | None:intergenic | 25.0% |
! | AATGATTACCATTATCCTAT+TGG | + | chr8_1:2080328-2080347 | Msa1172220:intron | 25.0% |
! | TAGTATTACTACTAACCAAT+AGG | - | chr8_1:2080346-2080365 | None:intergenic | 25.0% |
! | CCTTGCTTATATATATTTCA+TGG | - | chr8_1:2080650-2080669 | None:intergenic | 25.0% |
! | CCATGAAATATATATAAGCA+AGG | + | chr8_1:2080647-2080666 | Msa1172220:intron | 25.0% |
!!! | TTTAGTTTTGGACCTAAATT+TGG | - | chr8_1:2080677-2080696 | None:intergenic | 25.0% |
! | TTTAGGTCCAAAACTAAAAA+AGG | + | chr8_1:2080679-2080698 | Msa1172220:intron | 25.0% |
! | AAAAAAAAAAAAGGACACCA+AGG | + | chr8_1:2080703-2080722 | Msa1172220:intron | 25.0% |
! | AAAAAAAAAAAGGACACCAA+GGG | + | chr8_1:2080704-2080723 | Msa1172220:intron | 25.0% |
! | AAAAGTGAGAATTTGAGAAA+TGG | - | chr8_1:2080869-2080888 | None:intergenic | 25.0% |
! | AGAATAGAAGATGTAGAAAT+TGG | + | chr8_1:2081008-2081027 | Msa1172220:intron | 25.0% |
! | GAATAGAAGATGTAGAAATT+GGG | + | chr8_1:2081009-2081028 | Msa1172220:intron | 25.0% |
! | AATAGAAGATGTAGAAATTG+GGG | + | chr8_1:2081010-2081029 | Msa1172220:intron | 25.0% |
!!! | TTTTAGGAATTGCCAAATAT+TGG | + | chr8_1:2081677-2081696 | Msa1172220:three_prime_UTR | 25.0% |
! | TTTAGGAATTGCCAAATATT+TGG | + | chr8_1:2081678-2081697 | Msa1172220:three_prime_UTR | 25.0% |
AATTGATAAGAGGGAAAGAA+AGG | + | chr8_1:2073387-2073406 | Msa1172220:five_prime_UTR | 30.0% | |
AAATAAGCTGAGAAGAAGTA+TGG | - | chr8_1:2073528-2073547 | None:intergenic | 30.0% | |
ATACTTCTTCTCAGCTTATT+TGG | + | chr8_1:2073527-2073546 | Msa1172220:five_prime_UTR | 30.0% | |
TGAAATGAAATGAAAAGGGT+GGG | - | chr8_1:2073582-2073601 | None:intergenic | 30.0% | |
ATGAAATGAAATGAAAAGGG+TGG | - | chr8_1:2073583-2073602 | None:intergenic | 30.0% | |
ACTTTAATCTTTCTTGGCTT+GGG | - | chr8_1:2073673-2073692 | None:intergenic | 30.0% | |
! | TGCGTCAATTTTTCATCATT+TGG | + | chr8_1:2073701-2073720 | Msa1172220:intron | 30.0% |
! | GCGTCAATTTTTCATCATTT+GGG | + | chr8_1:2073702-2073721 | Msa1172220:intron | 30.0% |
! | GATTCTTTTAAACTTCTCAC+AGG | + | chr8_1:2073860-2073879 | Msa1172220:intron | 30.0% |
TTTAAACTTCTCACAGGAAT+TGG | + | chr8_1:2073866-2073885 | Msa1172220:intron | 30.0% | |
AAGAATAATAATACCTGGGA+GGG | - | chr8_1:2074105-2074124 | None:intergenic | 30.0% | |
AAAGAATAATAATACCTGGG+AGG | - | chr8_1:2074106-2074125 | None:intergenic | 30.0% | |
ATGTTTCTTTCTTCACTAAG+AGG | + | chr8_1:2074419-2074438 | Msa1172220:intron | 30.0% | |
TTGCAAATTGAGTTACAGTT+TGG | + | chr8_1:2074744-2074763 | Msa1172220:intron | 30.0% | |
TGCAAATTGAGTTACAGTTT+GGG | + | chr8_1:2074745-2074764 | Msa1172220:intron | 30.0% | |
TATTGTTGCCTATATATGGA+AGG | + | chr8_1:2074912-2074931 | Msa1172220:intron | 30.0% | |
TATCTTCAGGAAAAGGAAAA+GGG | - | chr8_1:2075045-2075064 | None:intergenic | 30.0% | |
TTATATATTGCCATGGAAAC+AGG | + | chr8_1:2075080-2075099 | Msa1172220:CDS | 30.0% | |
!!! | ACAGGTATGTGTTACTTTTA+TGG | + | chr8_1:2075098-2075117 | Msa1172220:intron | 30.0% |
ACAAGTACACATATCAAAAG+GGG | - | chr8_1:2075204-2075223 | None:intergenic | 30.0% | |
CACAAGTACACATATCAAAA+GGG | - | chr8_1:2075205-2075224 | None:intergenic | 30.0% | |
ACACAAGTACACATATCAAA+AGG | - | chr8_1:2075206-2075225 | None:intergenic | 30.0% | |
AACAAACAAATATCCCGTAT+AGG | + | chr8_1:2075698-2075717 | Msa1172220:CDS | 30.0% | |
AAATATCCCGTATAGGTTTA+TGG | + | chr8_1:2075705-2075724 | Msa1172220:CDS | 30.0% | |
AATATCCCGTATAGGTTTAT+GGG | + | chr8_1:2075706-2075725 | Msa1172220:CDS | 30.0% | |
TAGAACATTATTGCATCGTT+TGG | + | chr8_1:2075830-2075849 | Msa1172220:intron | 30.0% | |
AAATCGGAAAAACATAAAGC+GGG | + | chr8_1:2076132-2076151 | Msa1172220:intron | 30.0% | |
!! | TAATGTTCACTTTGCTTTTG+TGG | + | chr8_1:2076309-2076328 | Msa1172220:intron | 30.0% |
!! | AATGTTCACTTTGCTTTTGT+GGG | + | chr8_1:2076310-2076329 | Msa1172220:intron | 30.0% |
TTGTGGACGTTTATAAAATC+CGG | + | chr8_1:2076425-2076444 | Msa1172220:CDS | 30.0% | |
! | TCTTTTACAATAAAGGGAGT+TGG | - | chr8_1:2076526-2076545 | None:intergenic | 30.0% |
!!! | TTTGCATGGTTGTTTTTAAG+GGG | + | chr8_1:2076915-2076934 | Msa1172220:intron | 30.0% |
ATGATACTAGTTGAAACTCT+CGG | - | chr8_1:2076990-2077009 | None:intergenic | 30.0% | |
!!! | ATTTTTTAAGCTGTAGGTGT+AGG | + | chr8_1:2077085-2077104 | Msa1172220:intron | 30.0% |
GAGCTGAAAATCAAAATATG+TGG | - | chr8_1:2077116-2077135 | None:intergenic | 30.0% | |
GTTTGATTGAATGAATGAAC+TGG | + | chr8_1:2077233-2077252 | Msa1172220:intron | 30.0% | |
GTTATAAAATCACGCAAACT+AGG | - | chr8_1:2077281-2077300 | None:intergenic | 30.0% | |
! | GTCTAGTATGTTTGTTAAGT+CGG | + | chr8_1:2077374-2077393 | Msa1172220:intron | 30.0% |
TTCTCCCAATTAGGTTAAAA+TGG | + | chr8_1:2077412-2077431 | Msa1172220:intron | 30.0% | |
!! | ACAGCCATTTTAACCTAATT+GGG | - | chr8_1:2077419-2077438 | None:intergenic | 30.0% |
!! | TACAGCCATTTTAACCTAAT+TGG | - | chr8_1:2077420-2077439 | None:intergenic | 30.0% |
TATGAAATTGAACTGTGTTC+TGG | + | chr8_1:2077484-2077503 | Msa1172220:CDS | 30.0% | |
!!! | TTAATGCTTTTAAAGCGTAC+AGG | + | chr8_1:2077677-2077696 | Msa1172220:intron | 30.0% |
AAAACAGGAATGAATGTCTT+CGG | - | chr8_1:2077708-2077727 | None:intergenic | 30.0% | |
AATCATAAAAGAATTGTGGC+CGG | - | chr8_1:2077948-2077967 | None:intergenic | 30.0% | |
AAGAACATAATTAAGTGAGC+AGG | - | chr8_1:2078116-2078135 | None:intergenic | 30.0% | |
TCTTGAGCAAGGTAAAATTA+TGG | - | chr8_1:2078444-2078463 | None:intergenic | 30.0% | |
! | TCAACTTCCATTTCAGTTTT+TGG | + | chr8_1:2078572-2078591 | Msa1172220:intron | 30.0% |
! | GATTTTGTTGCAGATATTGT+TGG | - | chr8_1:2078859-2078878 | None:intergenic | 30.0% |
GGAAGAAAAAAATAGACAGA+AGG | - | chr8_1:2078939-2078958 | None:intergenic | 30.0% | |
TTGAAGAACTTTGCAATTTG+AGG | - | chr8_1:2079252-2079271 | None:intergenic | 30.0% | |
!!! | TTTTAAGGTTACTTTCGGAA+TGG | + | chr8_1:2079487-2079506 | Msa1172220:intron | 30.0% |
! | TTTAAGGTTACTTTCGGAAT+GGG | + | chr8_1:2079488-2079507 | Msa1172220:intron | 30.0% |
ACTTGTGAAAAAATCCTTGT+AGG | - | chr8_1:2079709-2079728 | None:intergenic | 30.0% | |
!!! | ACTTAGTTTTTAGAGTAGTG+GGG | - | chr8_1:2079763-2079782 | None:intergenic | 30.0% |
!!! | GACTTAGTTTTTAGAGTAGT+GGG | - | chr8_1:2079764-2079783 | None:intergenic | 30.0% |
!!! | AGACTTAGTTTTTAGAGTAG+TGG | - | chr8_1:2079765-2079784 | None:intergenic | 30.0% |
TAACTATGATCTGTTGATCA+GGG | - | chr8_1:2079866-2079885 | None:intergenic | 30.0% | |
ATAACTATGATCTGTTGATC+AGG | - | chr8_1:2079867-2079886 | None:intergenic | 30.0% | |
ACATAAAGCTAACAAAGACA+TGG | - | chr8_1:2079932-2079951 | None:intergenic | 30.0% | |
GAAGTTAAAATTGACAAGTG+TGG | + | chr8_1:2079999-2080018 | Msa1172220:intron | 30.0% | |
! | CTTGACCATTAATGACTTTT+AGG | + | chr8_1:2080069-2080088 | Msa1172220:intron | 30.0% |
AAGCTCAAATAGAGAAAGTT+GGG | + | chr8_1:2080132-2080151 | Msa1172220:CDS | 30.0% | |
TATTTAGCTATGGGAAAATG+TGG | - | chr8_1:2080276-2080295 | None:intergenic | 30.0% | |
!! | AAACGGAAGTATTTAGCTAT+GGG | - | chr8_1:2080285-2080304 | None:intergenic | 30.0% |
ACTACTAACCAATAGGATAA+TGG | - | chr8_1:2080339-2080358 | None:intergenic | 30.0% | |
!! | GTTAGGAGTAATTAGTCTTT+AGG | - | chr8_1:2080528-2080547 | None:intergenic | 30.0% |
CACTTAAGTAGGTTAATGAA+GGG | - | chr8_1:2080601-2080620 | None:intergenic | 30.0% | |
TCACTTAAGTAGGTTAATGA+AGG | - | chr8_1:2080602-2080621 | None:intergenic | 30.0% | |
GAATAGGTAATATTGACCAA+GGG | + | chr8_1:2080726-2080745 | Msa1172220:intron | 30.0% | |
AAGATGGTAAATTGACATCA+TGG | + | chr8_1:2080750-2080769 | Msa1172220:intron | 30.0% | |
TTGACATCATGGCTATAAAT+AGG | + | chr8_1:2080761-2080780 | Msa1172220:intron | 30.0% | |
ATCAGAGTTCACAAAATTTG+CGG | + | chr8_1:2080801-2080820 | Msa1172220:intron | 30.0% | |
ATTTGAGAAATGGTGATTTG+TGG | - | chr8_1:2080859-2080878 | None:intergenic | 30.0% | |
!! | ACTTGTTTGTGGTTTTACTA+CGG | - | chr8_1:2080905-2080924 | None:intergenic | 30.0% |
CTGAAAATTCTACTTGTTTG+TGG | - | chr8_1:2080916-2080935 | None:intergenic | 30.0% | |
TAAATAAGCTTCTTCACACT+TGG | - | chr8_1:2080953-2080972 | None:intergenic | 30.0% | |
AGAAGCTTATTTACTGAAGA+TGG | + | chr8_1:2080960-2080979 | Msa1172220:intron | 30.0% | |
ATAGAAGATGTAGAAATTGG+GGG | + | chr8_1:2081011-2081030 | Msa1172220:intron | 30.0% | |
! | ATTTGCCTGCTAGTTTATAT+AGG | + | chr8_1:2081249-2081268 | Msa1172220:intron | 30.0% |
! | TTTGCCTGCTAGTTTATATA+GGG | + | chr8_1:2081250-2081269 | Msa1172220:intron | 30.0% |
TAGCAATAAATACACATGAG+TGG | - | chr8_1:2081290-2081309 | None:intergenic | 30.0% | |
! | TTCTTCTTTTTACCCTTCTT+CGG | - | chr8_1:2081412-2081431 | None:intergenic | 30.0% |
GAAGAAGAAAAAAGCTGAAA+CGG | + | chr8_1:2081426-2081445 | Msa1172220:CDS | 30.0% | |
AAAACACAAATTTCGTGTGT+AGG | + | chr8_1:2081616-2081635 | Msa1172220:three_prime_UTR | 30.0% | |
!! | AGCATGACTAACTCATTTTT+AGG | + | chr8_1:2081661-2081680 | Msa1172220:three_prime_UTR | 30.0% |
TAATGATAACAGCGAAATGA+AGG | - | chr8_1:2081714-2081733 | None:intergenic | 30.0% | |
! | GAACATGACTAACTCATTTT+AGG | + | chr8_1:2081742-2081761 | Msa1172220:three_prime_UTR | 30.0% |
TGGTGTTCTTGGAATTGAAT+TGG | + | chr8_1:2073428-2073447 | Msa1172220:five_prime_UTR | 35.0% | |
GACTTTAATCTTTCTTGGCT+TGG | - | chr8_1:2073674-2073693 | None:intergenic | 35.0% | |
GTAGTAGTTTCAGATCCAAA+TGG | - | chr8_1:2073825-2073844 | None:intergenic | 35.0% | |
CACAACTCCAAAAGTCAAAT+TGG | - | chr8_1:2073932-2073951 | None:intergenic | 35.0% | |
AGTTGTGAAGAAAGAGAGAT+TGG | + | chr8_1:2073945-2073964 | Msa1172220:five_prime_UTR | 35.0% | |
CTTAGCTTACAATTAGAGTG+AGG | - | chr8_1:2074006-2074025 | None:intergenic | 35.0% | |
GTATCTATCTTATAGCCACT+TGG | - | chr8_1:2074047-2074066 | None:intergenic | 35.0% | |
TAAGCTATATTGGAGGACTT+AGG | - | chr8_1:2074256-2074275 | None:intergenic | 35.0% | |
! | TGTGTTTTGTGTATGCTGTA+AGG | - | chr8_1:2074287-2074306 | None:intergenic | 35.0% |
TTCTTCACTAAGAGGTCAAT+AGG | + | chr8_1:2074427-2074446 | Msa1172220:intron | 35.0% | |
TCTTCACTAAGAGGTCAATA+GGG | + | chr8_1:2074428-2074447 | Msa1172220:intron | 35.0% | |
! | CATGGTTCTTTGAAGATTGT+TGG | - | chr8_1:2074587-2074606 | None:intergenic | 35.0% |
ACATGTTGAGACTTGAGAAA+TGG | - | chr8_1:2074710-2074729 | None:intergenic | 35.0% | |
TTATACTTTGCCACATACAC+AGG | + | chr8_1:2074771-2074790 | Msa1172220:intron | 35.0% | |
TATACTTTGCCACATACACA+GGG | + | chr8_1:2074772-2074791 | Msa1172220:intron | 35.0% | |
GTGATGTACCTTCCATATAT+AGG | - | chr8_1:2074923-2074942 | None:intergenic | 35.0% | |
GAGATAATGACTACACTTCA+AGG | - | chr8_1:2075023-2075042 | None:intergenic | 35.0% | |
GTATCTTCAGGAAAAGGAAA+AGG | - | chr8_1:2075046-2075065 | None:intergenic | 35.0% | |
!! | AGAGAAGTATCTTCAGGAAA+AGG | - | chr8_1:2075052-2075071 | None:intergenic | 35.0% |
CCATGGCAATATATAACACA+AGG | - | chr8_1:2075076-2075095 | None:intergenic | 35.0% | |
CCTTGTGTTATATATTGCCA+TGG | + | chr8_1:2075073-2075092 | Msa1172220:CDS | 35.0% | |
TAATTCAGAACCAATAGCAG+TGG | - | chr8_1:2075124-2075143 | None:intergenic | 35.0% | |
ACTTGTGTTAAATGATGCAG+TGG | + | chr8_1:2075218-2075237 | Msa1172220:intron | 35.0% | |
TTAAATGATGCAGTGGATGT+AGG | + | chr8_1:2075225-2075244 | Msa1172220:intron | 35.0% | |
TAAATGATGCAGTGGATGTA+GGG | + | chr8_1:2075226-2075245 | Msa1172220:intron | 35.0% | |
!! | TGTTTTTACCCTTGACTTCT+CGG | + | chr8_1:2075295-2075314 | Msa1172220:CDS | 35.0% |
!! | TGTTTTTACCCTTGTCTTCT+CGG | + | chr8_1:2075421-2075440 | Msa1172220:intron | 35.0% |
AAGTTACTTCAAGCCAACTA+AGG | - | chr8_1:2075483-2075502 | None:intergenic | 35.0% | |
TCTTGCACGTGAAATTGTAA+CGG | - | chr8_1:2075600-2075619 | None:intergenic | 35.0% | |
ATCATCTTTCTACCACACAA+AGG | - | chr8_1:2075648-2075667 | None:intergenic | 35.0% | |
GAAAGATGATCTGAAGATTG+TGG | + | chr8_1:2075658-2075677 | Msa1172220:intron | 35.0% | |
ATATCCCGTATAGGTTTATG+GGG | + | chr8_1:2075707-2075726 | Msa1172220:CDS | 35.0% | |
AAAACTTATCCCACTAAGTG+GGG | - | chr8_1:2075869-2075888 | None:intergenic | 35.0% | |
CAAAACTTATCCCACTAAGT+GGG | - | chr8_1:2075870-2075889 | None:intergenic | 35.0% | |
GTATCTCACCAAGAAAAGAA+AGG | + | chr8_1:2075951-2075970 | Msa1172220:intron | 35.0% | |
! | ATTGAGGTCCTTTCTTTTCT+TGG | - | chr8_1:2075962-2075981 | None:intergenic | 35.0% |
AAGAAAAGAAAGGACCTCAA+TGG | + | chr8_1:2075961-2075980 | Msa1172220:intron | 35.0% | |
AGAAAAGAAAGGACCTCAAT+GGG | + | chr8_1:2075962-2075981 | Msa1172220:intron | 35.0% | |
TATGTGAAAATCACCCATTG+AGG | - | chr8_1:2075978-2075997 | None:intergenic | 35.0% | |
! | TCCACTAAAGTTTTCTGTCA+AGG | + | chr8_1:2076013-2076032 | Msa1172220:intron | 35.0% |
! | CCACTAAAGTTTTCTGTCAA+GGG | + | chr8_1:2076014-2076033 | Msa1172220:intron | 35.0% |
ATACCATTCCAGCAATAGAA+GGG | - | chr8_1:2076363-2076382 | None:intergenic | 35.0% | |
AATACCATTCCAGCAATAGA+AGG | - | chr8_1:2076364-2076383 | None:intergenic | 35.0% | |
TTCTATTGCTGGAATGGTAT+TGG | + | chr8_1:2076363-2076382 | Msa1172220:CDS | 35.0% | |
CATTCTTCATAAGTTGTTGC+TGG | + | chr8_1:2076613-2076632 | Msa1172220:intron | 35.0% | |
GTAAAGAAAAAGGAATCCCT+AGG | + | chr8_1:2076733-2076752 | Msa1172220:intron | 35.0% | |
ATGTATAATTAGGCCAAAGC+TGG | + | chr8_1:2077008-2077027 | Msa1172220:intron | 35.0% | |
TGTATAATTAGGCCAAAGCT+GGG | + | chr8_1:2077009-2077028 | Msa1172220:intron | 35.0% | |
CAATTCTAACTGACAGCTAT+AGG | - | chr8_1:2077355-2077374 | None:intergenic | 35.0% | |
! | TGTTGCATTTTCTCCCAATT+AGG | + | chr8_1:2077403-2077422 | Msa1172220:intron | 35.0% |
AAATGGCTGTACAATACATG+CGG | + | chr8_1:2077429-2077448 | Msa1172220:CDS | 35.0% | |
ATGACGAATCTAACCACAAT+AGG | + | chr8_1:2077596-2077615 | Msa1172220:intron | 35.0% | |
!! | AACCACAATAGGCTTTATTC+AGG | + | chr8_1:2077607-2077626 | Msa1172220:intron | 35.0% |
AACCTGAATAAAGCCTATTG+TGG | - | chr8_1:2077612-2077631 | None:intergenic | 35.0% | |
CTTGCATGTCCAAATAAAAC+AGG | - | chr8_1:2077723-2077742 | None:intergenic | 35.0% | |
ATCATAAAAGAATTGTGGCC+GGG | - | chr8_1:2077947-2077966 | None:intergenic | 35.0% | |
GAGGACATTGTAGAAGAAAA+TGG | - | chr8_1:2077977-2077996 | None:intergenic | 35.0% | |
! | TTTTCAGCAATAGAGACTTG+AGG | - | chr8_1:2078006-2078025 | None:intergenic | 35.0% |
! | GATTTAGGGGATTTGAAACT+TGG | + | chr8_1:2078042-2078061 | Msa1172220:CDS | 35.0% |
TGAATAACTAGTAGTGTGGA+GGG | - | chr8_1:2078179-2078198 | None:intergenic | 35.0% | |
! | AACTAAATTCTTTGAGGACC+AGG | - | chr8_1:2078305-2078324 | None:intergenic | 35.0% |
! | CATTTTGTTGATCTTGAGCA+AGG | - | chr8_1:2078455-2078474 | None:intergenic | 35.0% |
CTTGCTCAAGATCAACAAAA+TGG | + | chr8_1:2078453-2078472 | Msa1172220:intron | 35.0% | |
TGAAACCTCTAATCATGTCT+GGG | + | chr8_1:2078519-2078538 | Msa1172220:intron | 35.0% | |
GGTGCCTACATTATAAGTAA+TGG | - | chr8_1:2078986-2079005 | None:intergenic | 35.0% | |
GTAGTTTCATCTTCAAGCAA+GGG | - | chr8_1:2079007-2079026 | None:intergenic | 35.0% | |
TGTAGTTTCATCTTCAAGCA+AGG | - | chr8_1:2079008-2079027 | None:intergenic | 35.0% | |
GAAACTACAGATGACAATGA+TGG | + | chr8_1:2079019-2079038 | Msa1172220:CDS | 35.0% | |
! | ACAGATGACAATGATGGAAT+TGG | + | chr8_1:2079025-2079044 | Msa1172220:CDS | 35.0% |
GTGAAATTAAGAAATGGTCC+AGG | + | chr8_1:2079094-2079113 | Msa1172220:intron | 35.0% | |
!! | CACTTTAAAATCTACACGAG+AGG | + | chr8_1:2079161-2079180 | Msa1172220:intron | 35.0% |
ATGCTAGTAACACACTCTTA+TGG | + | chr8_1:2079185-2079204 | Msa1172220:intron | 35.0% | |
! | CACTCTTATGGACATTCTTT+TGG | + | chr8_1:2079197-2079216 | Msa1172220:intron | 35.0% |
! | AATACTAGCAAAGGTACAGT+AGG | - | chr8_1:2079398-2079417 | None:intergenic | 35.0% |
!! | TTGTTAGCTTTATGTAAGCC+TGG | + | chr8_1:2079937-2079956 | Msa1172220:intron | 35.0% |
!!! | TGTCGTTGATGACATCATTT+TGG | + | chr8_1:2079973-2079992 | Msa1172220:intron | 35.0% |
TAATGGTCAAGTTCAAGTGA+AGG | - | chr8_1:2080060-2080079 | None:intergenic | 35.0% | |
CTTGCCCTAAAAGTCATTAA+TGG | - | chr8_1:2080077-2080096 | None:intergenic | 35.0% | |
ATGAGCAACAATCTTCAATC+TGG | - | chr8_1:2080108-2080127 | None:intergenic | 35.0% | |
CAAGCTCAAATAGAGAAAGT+TGG | + | chr8_1:2080131-2080150 | Msa1172220:CDS | 35.0% | |
AGCTCAAATAGAGAAAGTTG+GGG | + | chr8_1:2080133-2080152 | Msa1172220:CDS | 35.0% | |
!! | GAAACGGAAGTATTTAGCTA+TGG | - | chr8_1:2080286-2080305 | None:intergenic | 35.0% |
TTGAGTTTCTACAAAGGGTA+AGG | - | chr8_1:2080448-2080467 | None:intergenic | 35.0% | |
TTACCCTTTGTAGAAACTCA+AGG | + | chr8_1:2080447-2080466 | Msa1172220:intron | 35.0% | |
TCTCCTTGAGTTTCTACAAA+GGG | - | chr8_1:2080453-2080472 | None:intergenic | 35.0% | |
TTCTCCTTGAGTTTCTACAA+AGG | - | chr8_1:2080454-2080473 | None:intergenic | 35.0% | |
AACCTACTTAAGTGAGTTAG+AGG | + | chr8_1:2080607-2080626 | Msa1172220:intron | 35.0% | |
!! | GTTTTGGACCTAAATTTGGT+TGG | - | chr8_1:2080673-2080692 | None:intergenic | 35.0% |
GTCAATATTACCTATTCCCT+TGG | - | chr8_1:2080723-2080742 | None:intergenic | 35.0% | |
GGAATAGGTAATATTGACCA+AGG | + | chr8_1:2080725-2080744 | Msa1172220:intron | 35.0% | |
AATATTGACCAAGGGTAAGA+TGG | + | chr8_1:2080734-2080753 | Msa1172220:intron | 35.0% | |
TCAATTTACCATCTTACCCT+TGG | - | chr8_1:2080745-2080764 | None:intergenic | 35.0% | |
GCTATAAATAGGAGATAGCA+AGG | + | chr8_1:2080772-2080791 | Msa1172220:intron | 35.0% | |
TACTGAAGATGGAAGATCAA+CGG | + | chr8_1:2080971-2080990 | Msa1172220:intron | 35.0% | |
!! | TAACGCCTCATTTTTAGAGA+GGG | - | chr8_1:2081187-2081206 | None:intergenic | 35.0% |
!! | ATAACGCCTCATTTTTAGAG+AGG | - | chr8_1:2081188-2081207 | None:intergenic | 35.0% |
AGAACCCTATATAAACTAGC+AGG | - | chr8_1:2081257-2081276 | None:intergenic | 35.0% | |
TTCTCTTTCATACTTCGCAA+AGG | - | chr8_1:2081358-2081377 | None:intergenic | 35.0% | |
TTCTCAAATCTGTCACTCTT+TGG | - | chr8_1:2081463-2081482 | None:intergenic | 35.0% | |
!! | AGATGACTTGTTTCTTCGAT+GGG | - | chr8_1:2081536-2081555 | None:intergenic | 35.0% |
!! | AAGATGACTTGTTTCTTCGA+TGG | - | chr8_1:2081537-2081556 | None:intergenic | 35.0% |
!! | GCCAAATATTGGTTTCTGAT+TGG | + | chr8_1:2081688-2081707 | Msa1172220:three_prime_UTR | 35.0% |
GCCAATCAGAAACCAATATT+TGG | - | chr8_1:2081692-2081711 | None:intergenic | 35.0% | |
! | GAGAAGAAGTATGGTTAGAG+AGG | - | chr8_1:2073519-2073538 | None:intergenic | 40.0% |
CTTCTTCTCAGCTTATTTGG+TGG | + | chr8_1:2073530-2073549 | Msa1172220:five_prime_UTR | 40.0% | |
!! | ACTTTTAAGGGAACGCCATT+TGG | + | chr8_1:2073807-2073826 | Msa1172220:intron | 40.0% |
ATTCATTTCATGACGCCAAG+TGG | + | chr8_1:2074029-2074048 | Msa1172220:five_prime_UTR | 40.0% | |
TACTGTGCTCAAACTGAACA+TGG | + | chr8_1:2074509-2074528 | Msa1172220:intron | 40.0% | |
GACTTGAGAAATGGATGTTG+AGG | - | chr8_1:2074701-2074720 | None:intergenic | 40.0% | |
! | TTTTCCCACAGATACTGATC+CGG | - | chr8_1:2074809-2074828 | None:intergenic | 40.0% |
GAAAAGGAATTCTCTCTTGC+TGG | + | chr8_1:2074824-2074843 | Msa1172220:CDS | 40.0% | |
GCAGTACATACGCAAACAAT+TGG | - | chr8_1:2074950-2074969 | None:intergenic | 40.0% | |
!! | CAAGGAAGAGAAGTATCTTC+AGG | - | chr8_1:2075058-2075077 | None:intergenic | 40.0% |
GTAACACATACCTGTTTCCA+TGG | - | chr8_1:2075093-2075112 | None:intergenic | 40.0% | |
! | ACTTTTATGGCCACTGCTAT+TGG | + | chr8_1:2075111-2075130 | Msa1172220:intron | 40.0% |
! | GTTTTTACCCTTGACTTCTC+GGG | + | chr8_1:2075296-2075315 | Msa1172220:CDS | 40.0% |
! | TTTTTACCCTTGACTTCTCG+GGG | + | chr8_1:2075297-2075316 | Msa1172220:CDS | 40.0% |
! | GTTTTTACCCTTGTCTTCTC+GGG | + | chr8_1:2075422-2075441 | Msa1172220:intron | 40.0% |
! | TTTTTACCCTTGTCTTCTCG+GGG | + | chr8_1:2075423-2075442 | Msa1172220:intron | 40.0% |
CACACAAAGGAATGGTCAAA+AGG | - | chr8_1:2075635-2075654 | None:intergenic | 40.0% | |
! | CTTTTGACCATTCCTTTGTG+TGG | + | chr8_1:2075633-2075652 | Msa1172220:intron | 40.0% |
CTTTCTACCACACAAAGGAA+TGG | - | chr8_1:2075643-2075662 | None:intergenic | 40.0% | |
TATCCCGTATAGGTTTATGG+GGG | + | chr8_1:2075708-2075727 | Msa1172220:CDS | 40.0% | |
CCAAAACTTATCCCACTAAG+TGG | - | chr8_1:2075871-2075890 | None:intergenic | 40.0% | |
! | CCACTTAGTGGGATAAGTTT+TGG | + | chr8_1:2075868-2075887 | Msa1172220:intron | 40.0% |
!! | CTTAGTGGGATAAGTTTTGG+TGG | + | chr8_1:2075871-2075890 | Msa1172220:intron | 40.0% |
CCCTTGACAGAAAACTTTAG+TGG | - | chr8_1:2076017-2076036 | None:intergenic | 40.0% | |
TTTCTCTCCATGCATCTTTG+TGG | + | chr8_1:2076052-2076071 | Msa1172220:intron | 40.0% | |
! | GTTTTGTCCACAAAGATGCA+TGG | - | chr8_1:2076062-2076081 | None:intergenic | 40.0% |
CTTTGTGGACAAAACTGTTG+AGG | + | chr8_1:2076067-2076086 | Msa1172220:intron | 40.0% | |
! | GTGGGATTTAGCCTTCTTTA+TGG | + | chr8_1:2076328-2076347 | Msa1172220:intron | 40.0% |
! | TAATCTCATGATGGAGCTTG+TGG | + | chr8_1:2076408-2076427 | Msa1172220:CDS | 40.0% |
TAAAGGGAGTTGGCAATACT+TGG | - | chr8_1:2076516-2076535 | None:intergenic | 40.0% | |
CATAAGTTGTTGCTGGAATC+TGG | + | chr8_1:2076620-2076639 | Msa1172220:intron | 40.0% | |
! | TATTCTAGCCTCTAGCTTGT+AGG | + | chr8_1:2076655-2076674 | Msa1172220:intron | 40.0% |
!! | TGTTTTTAAGGGGTTGTCAC+AGG | + | chr8_1:2076925-2076944 | Msa1172220:intron | 40.0% |
GTAGTTGAAATTCCCAGCTT+TGG | - | chr8_1:2077024-2077043 | None:intergenic | 40.0% | |
!!! | CTGGTTACTTTTGAGCAACA+TGG | + | chr8_1:2077308-2077327 | Msa1172220:intron | 40.0% |
TCTCATCTCAGAATCCTATG+CGG | + | chr8_1:2077776-2077795 | Msa1172220:CDS | 40.0% | |
GTTAAATACCTCATCCACAC+CGG | - | chr8_1:2078070-2078089 | None:intergenic | 40.0% | |
CTGAATAACTAGTAGTGTGG+AGG | - | chr8_1:2078180-2078199 | None:intergenic | 40.0% | |
GCACTGAATAACTAGTAGTG+TGG | - | chr8_1:2078183-2078202 | None:intergenic | 40.0% | |
TAGAGGTTTCAGGCAAGTTA+AGG | - | chr8_1:2078510-2078529 | None:intergenic | 40.0% | |
CAGACATGATTAGAGGTTTC+AGG | - | chr8_1:2078520-2078539 | None:intergenic | 40.0% | |
CTGAAACCTCTAATCATGTC+TGG | + | chr8_1:2078518-2078537 | Msa1172220:intron | 40.0% | |
GAAACCTCTAATCATGTCTG+GGG | + | chr8_1:2078520-2078539 | Msa1172220:intron | 40.0% | |
AAAGATAACCTGCACACTTG+CGG | - | chr8_1:2079062-2079081 | None:intergenic | 40.0% | |
TCAATGTGTAGGAGGAATGT+TGG | - | chr8_1:2079347-2079366 | None:intergenic | 40.0% | |
CATTCCTCCTACACATTGAA+CGG | + | chr8_1:2079348-2079367 | Msa1172220:intron | 40.0% | |
!! | AAAAGCACCGTTCAATGTGT+AGG | - | chr8_1:2079358-2079377 | None:intergenic | 40.0% |
GATAGACAAAGTTCGAAGAG+TGG | + | chr8_1:2079530-2079549 | Msa1172220:intron | 40.0% | |
AACAATTATGTGCGCCTACA+AGG | + | chr8_1:2079692-2079711 | Msa1172220:intron | 40.0% | |
ATCAACGACATAAGAAAGCC+AGG | - | chr8_1:2079963-2079982 | None:intergenic | 40.0% | |
!!! | GACTTTTAGGGCAAGCTAAA+TGG | + | chr8_1:2080082-2080101 | Msa1172220:intron | 40.0% |
CTCCTCTAACTCACTTAAGT+AGG | - | chr8_1:2080612-2080631 | None:intergenic | 40.0% | |
AAGCAAGGCCAACCAAATTT+AGG | + | chr8_1:2080662-2080681 | Msa1172220:intron | 40.0% | |
AAAAAGGACACCAAGGGAAT+AGG | + | chr8_1:2080710-2080729 | Msa1172220:intron | 40.0% | |
AAGCTTCTTCACACTTGGAA+TGG | - | chr8_1:2080948-2080967 | None:intergenic | 40.0% | |
AGATGTAGAAATTGGGGGAA+AGG | + | chr8_1:2081016-2081035 | Msa1172220:intron | 40.0% | |
! | AAGCTCCCTCTCTAAAAATG+AGG | + | chr8_1:2081179-2081198 | Msa1172220:intron | 40.0% |
GTCATGTCAGAATACTGTGA+AGG | + | chr8_1:2081321-2081340 | Msa1172220:intron | 40.0% | |
AGATGAAAAGAAGCCGAAGA+AGG | + | chr8_1:2081396-2081415 | Msa1172220:CDS | 40.0% | |
GATGAAAAGAAGCCGAAGAA+GGG | + | chr8_1:2081397-2081416 | Msa1172220:CDS | 40.0% | |
! | TTGCGGCTTTGTCTTCTTAA+GGG | + | chr8_1:2081505-2081524 | Msa1172220:CDS | 40.0% |
! | CTTCTCAGCTTATTTGGTGG+TGG | + | chr8_1:2073533-2073552 | Msa1172220:five_prime_UTR | 45.0% |
TGGTAGCTTAGCTCAGACTT+TGG | + | chr8_1:2073556-2073575 | Msa1172220:five_prime_UTR | 45.0% | |
GGCTTGGGAACAGACAAAAA+AGG | - | chr8_1:2073658-2073677 | None:intergenic | 45.0% | |
ATAACCCGGATCAGTATCTG+TGG | + | chr8_1:2074801-2074820 | Msa1172220:CDS | 45.0% | |
TAACCCGGATCAGTATCTGT+GGG | + | chr8_1:2074802-2074821 | Msa1172220:CDS | 45.0% | |
TTTCCCACAGATACTGATCC+GGG | - | chr8_1:2074808-2074827 | None:intergenic | 45.0% | |
GGATCAGTATCTGTGGGAAA+AGG | + | chr8_1:2074808-2074827 | Msa1172220:CDS | 45.0% | |
TTGCTGGTAGAACCTACCAA+AGG | + | chr8_1:2074840-2074859 | Msa1172220:CDS | 45.0% | |
CTCTAAATCCTGCCTTTGGT+AGG | - | chr8_1:2074855-2074874 | None:intergenic | 45.0% | |
CTACCAAAGGCAGGATTTAG+AGG | + | chr8_1:2074853-2074872 | Msa1172220:CDS | 45.0% | |
TTGCCTCTAAATCCTGCCTT+TGG | - | chr8_1:2074859-2074878 | None:intergenic | 45.0% | |
ACACTTCAAGGTATAGCCTC+TGG | - | chr8_1:2075011-2075030 | None:intergenic | 45.0% | |
GAGAATTACAGCCGCTTCAT+TGG | - | chr8_1:2075258-2075277 | None:intergenic | 45.0% | |
AACTTACTTCGTGCCAACCA+AGG | - | chr8_1:2075352-2075371 | None:intergenic | 45.0% | |
!! | AGATTGTGGTGTCGCATTTG+AGG | + | chr8_1:2075672-2075691 | Msa1172220:CDS | 45.0% |
ACCTCCCCCATAAACCTATA+CGG | - | chr8_1:2075715-2075734 | None:intergenic | 45.0% | |
TCCAGCAATAGAAGGGTCTT+CGG | - | chr8_1:2076356-2076375 | None:intergenic | 45.0% | |
AGACCCTTCTATTGCTGGAA+TGG | + | chr8_1:2076357-2076376 | Msa1172220:CDS | 45.0% | |
AATCCGGCTTCCAAAGTTCA+CGG | + | chr8_1:2076441-2076460 | Msa1172220:CDS | 45.0% | |
!! | AGAGAGAGTACCGTGAACTT+TGG | - | chr8_1:2076454-2076473 | None:intergenic | 45.0% |
CAATACTTGGCATCCACACA+GGG | - | chr8_1:2076503-2076522 | None:intergenic | 45.0% | |
TTCAGCTCGACTGTCCAAAT+TGG | + | chr8_1:2077128-2077147 | Msa1172220:intron | 45.0% | |
GAGATGAGATCAGAGTGATG+CGG | - | chr8_1:2077765-2077784 | None:intergenic | 45.0% | |
ATAAAAGAATTGTGGCCGGG+AGG | - | chr8_1:2077944-2077963 | None:intergenic | 45.0% | |
CAATAGAGACTTGAGGAGGA+CGG | - | chr8_1:2077999-2078018 | None:intergenic | 45.0% | |
TCAGCAATAGAGACTTGAGG+AGG | - | chr8_1:2078003-2078022 | None:intergenic | 45.0% | |
! | GGGGATTTGAAACTTGGTTC+CGG | + | chr8_1:2078048-2078067 | Msa1172220:CDS | 45.0% |
! | TTTGAAACTTGGTTCCGGTG+TGG | + | chr8_1:2078053-2078072 | Msa1172220:CDS | 45.0% |
GTTTCAGGCAAGTTAAGGCT+AGG | - | chr8_1:2078505-2078524 | None:intergenic | 45.0% | |
ACGAGATTCTCTCTAGTCTG+CGG | + | chr8_1:2078794-2078813 | Msa1172220:CDS | 45.0% | |
AAAGTTCGAAGAGTGGCTAG+TGG | + | chr8_1:2079537-2079556 | Msa1172220:intron | 45.0% | |
CAAATAGAGAAAGTTGGGGC+AGG | + | chr8_1:2080137-2080156 | Msa1172220:CDS | 45.0% | |
TGCTGATGATAAGCTCTCTC+AGG | + | chr8_1:2080207-2080226 | Msa1172220:CDS | 45.0% | |
! | ATGGTGATTTGTGGCGTGAA+GGG | - | chr8_1:2080850-2080869 | None:intergenic | 45.0% |
! | AATGGTGATTTGTGGCGTGA+AGG | - | chr8_1:2080851-2080870 | None:intergenic | 45.0% |
TGAAGATGGAAGATCAACGG+AGG | + | chr8_1:2080974-2080993 | Msa1172220:intron | 45.0% | |
ATGGAAGATCAACGGAGGTT+AGG | + | chr8_1:2080979-2080998 | Msa1172220:intron | 45.0% | |
TGGAAGATCAACGGAGGTTA+GGG | + | chr8_1:2080980-2080999 | Msa1172220:intron | 45.0% | |
GAGTGACAGATTTGAGAAGC+TGG | + | chr8_1:2081465-2081484 | Msa1172220:CDS | 45.0% | |
TGACAGATTTGAGAAGCTGG+AGG | + | chr8_1:2081468-2081487 | Msa1172220:CDS | 45.0% | |
! | CTTGCGGCTTTGTCTTCTTA+AGG | + | chr8_1:2081504-2081523 | Msa1172220:CDS | 45.0% |
!!! | TTTTTAATCATTTTATAAAT+CGG | + | chr8_1:2076116-2076135 | Msa1172220:intron | 5.0% |
!!! | ATAAAGATTTTTTTTTTTTT+TGG | + | chr8_1:2077052-2077071 | Msa1172220:intron | 5.0% |
!!! | TAAAGATTTTTTTTTTTTTT+GGG | + | chr8_1:2077053-2077072 | Msa1172220:intron | 5.0% |
AGAGGGAAAGAAAGGACAGC+TGG | + | chr8_1:2073395-2073414 | Msa1172220:five_prime_UTR | 50.0% | |
AAAGAAAGGACAGCTGGCTG+AGG | + | chr8_1:2073401-2073420 | Msa1172220:five_prime_UTR | 50.0% | |
!! | GCTGAGGTGTTTGGTGTTCT+TGG | + | chr8_1:2073417-2073436 | Msa1172220:five_prime_UTR | 50.0% |
!! | CTCAGCTTATTTGGTGGTGG+TGG | + | chr8_1:2073536-2073555 | Msa1172220:five_prime_UTR | 50.0% |
ATTTCGTTATTCGCCCTCCC+AGG | + | chr8_1:2074089-2074108 | Msa1172220:CDS | 50.0% | |
ACTTTGCCACATACACAGGG+CGG | + | chr8_1:2074775-2074794 | Msa1172220:intron | 50.0% | |
TATAGTCCGCCCTGTGTATG+TGG | - | chr8_1:2074784-2074803 | None:intergenic | 50.0% | |
TGGTAGAACCTACCAAAGGC+AGG | + | chr8_1:2074844-2074863 | Msa1172220:CDS | 50.0% | |
TAGGGCAGATGCCAATGAAG+CGG | + | chr8_1:2075244-2075263 | Msa1172220:CDS | 50.0% | |
GATGGAGACTATGTCAGCCT+TGG | + | chr8_1:2075332-2075351 | Msa1172220:CDS | 50.0% | |
GAGACTATGTCAGCCTTGGT+TGG | + | chr8_1:2075336-2075355 | Msa1172220:CDS | 50.0% | |
CCTCCCCCATAAACCTATAC+GGG | - | chr8_1:2075714-2075733 | None:intergenic | 50.0% | |
AGGTTTATGGGGGAGGTCAA+TGG | + | chr8_1:2075718-2075737 | Msa1172220:CDS | 50.0% | |
GGTTTATGGGGGAGGTCAAT+GGG | + | chr8_1:2075719-2075738 | Msa1172220:CDS | 50.0% | |
ATGCAACCAACCCCACTTAG+TGG | + | chr8_1:2075856-2075875 | Msa1172220:intron | 50.0% | |
TGCAACCAACCCCACTTAGT+GGG | + | chr8_1:2075857-2075876 | Msa1172220:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+TGG | - | chr8_1:2075865-2075884 | None:intergenic | 50.0% | |
GGTCTTCGGCTCCATAAAGA+AGG | - | chr8_1:2076342-2076361 | None:intergenic | 50.0% | |
! | GTACCGTGAACTTTGGAAGC+CGG | - | chr8_1:2076447-2076466 | None:intergenic | 50.0% |
GCAATACTTGGCATCCACAC+AGG | - | chr8_1:2076504-2076523 | None:intergenic | 50.0% | |
! | AGCCTCTAGCTTGTAGGACT+TGG | + | chr8_1:2076661-2076680 | Msa1172220:intron | 50.0% |
CACCAAGTCCTACAAGCTAG+AGG | - | chr8_1:2076666-2076685 | None:intergenic | 50.0% | |
TGGCTGTACAATACATGCGG+CGG | + | chr8_1:2077432-2077451 | Msa1172220:CDS | 50.0% | |
ATGGCGACCATAATTCCTCC+CGG | + | chr8_1:2077926-2077945 | Msa1172220:CDS | 50.0% | |
ATTGTGGCCGGGAGGAATTA+TGG | - | chr8_1:2077936-2077955 | None:intergenic | 50.0% | |
AGCTGCACTTATGAGAAGCC+TGG | + | chr8_1:2078284-2078303 | Msa1172220:intron | 50.0% | |
ACCTCTAATCATGTCTGGGG+CGG | + | chr8_1:2078523-2078542 | Msa1172220:intron | 50.0% | |
CTCCCCTGACTGATGTAGTA+GGG | + | chr8_1:2078905-2078924 | Msa1172220:intron | 50.0% | |
CACCCTACTACATCAGTCAG+GGG | - | chr8_1:2078910-2078929 | None:intergenic | 50.0% | |
GCACCCTACTACATCAGTCA+GGG | - | chr8_1:2078911-2078930 | None:intergenic | 50.0% | |
AGCACCGTTCAATGTGTAGG+AGG | - | chr8_1:2079355-2079374 | None:intergenic | 50.0% | |
! | AGCTTTATGTAAGCCTGGCC+TGG | + | chr8_1:2079942-2079961 | Msa1172220:intron | 50.0% |
TGGGGCAGGTGTTCTTCATT+AGG | + | chr8_1:2080151-2080170 | Msa1172220:CDS | 50.0% | |
GGCAGGTGTTCTTCATTAGG+AGG | + | chr8_1:2080154-2080173 | Msa1172220:CDS | 50.0% | |
! | TGGTGATTTGTGGCGTGAAG+GGG | - | chr8_1:2080849-2080868 | None:intergenic | 50.0% |
!! | ACACAGGGCGGACTATAACC+CGG | + | chr8_1:2074787-2074806 | Msa1172220:intron | 55.0% |
GTGCAGCTCAAGAATGCCAG+AGG | + | chr8_1:2074992-2075011 | Msa1172220:intron | 55.0% | |
TCGGGGTCAGGCTTATCTGA+TGG | + | chr8_1:2075314-2075333 | Msa1172220:CDS | 55.0% | |
TCGGGGTCAGGCTTATCTGA+TGG | + | chr8_1:2075314-2075333 | Msa1172220:CDS | 55.0% | |
CCCGTATAGGTTTATGGGGG+AGG | + | chr8_1:2075711-2075730 | Msa1172220:CDS | 55.0% | |
GGTCAATGGGCGCAGTTACT+AGG | + | chr8_1:2075732-2075751 | Msa1172220:CDS | 55.0% | |
GCCGAAGACCCTTCTATTGC+TGG | + | chr8_1:2076352-2076371 | Msa1172220:CDS | 55.0% | |
TCTGTGCGTGTATCCCTGTG+TGG | + | chr8_1:2076487-2076506 | Msa1172220:intron | 55.0% | |
GGCTGTACAATACATGCGGC+GGG | + | chr8_1:2077433-2077452 | Msa1172220:CDS | 55.0% | |
!! | GCGGCGGGTTATTGAGAAGA+AGG | + | chr8_1:2077448-2077467 | Msa1172220:CDS | 55.0% |
TAGAGACTTGAGGAGGACGG+AGG | - | chr8_1:2077996-2078015 | None:intergenic | 55.0% | |
ACTTGGTTCCGGTGTGGATG+AGG | + | chr8_1:2078059-2078078 | Msa1172220:CDS | 55.0% | |
TCCGCCCCAGACATGATTAG+AGG | - | chr8_1:2078527-2078546 | None:intergenic | 55.0% | |
GCTCCCCTGACTGATGTAGT+AGG | + | chr8_1:2078904-2078923 | Msa1172220:intron | 55.0% | |
GGCACCCTACTACATCAGTC+AGG | - | chr8_1:2078912-2078931 | None:intergenic | 55.0% | |
GCACACTTGCGGCTTCATCA+GGG | - | chr8_1:2079051-2079070 | None:intergenic | 55.0% | |
TGCACACTTGCGGCTTCATC+AGG | - | chr8_1:2079052-2079071 | None:intergenic | 55.0% | |
TGATGAAGCCGCAAGTGTGC+AGG | + | chr8_1:2079051-2079070 | Msa1172220:CDS | 55.0% | |
CGACATAAGAAAGCCAGGCC+AGG | - | chr8_1:2079958-2079977 | None:intergenic | 55.0% | |
GCGTGAAGGGGTGAAGTTTG+TGG | - | chr8_1:2080837-2080856 | None:intergenic | 55.0% | |
! | GGACAGCTGGCTGAGGTGTT+TGG | + | chr8_1:2073408-2073427 | Msa1172220:five_prime_UTR | 60.0% |
ACCCTTGACTTCTCGGGGTC+AGG | + | chr8_1:2075302-2075321 | Msa1172220:CDS | 60.0% | |
GCCTGACCCCGAGAAGTCAA+GGG | - | chr8_1:2075306-2075325 | None:intergenic | 60.0% | |
AGCCTGACCCCGAGAAGTCA+AGG | - | chr8_1:2075307-2075326 | None:intergenic | 60.0% | |
ACCCTTGTCTTCTCGGGGTC+AGG | + | chr8_1:2075428-2075447 | Msa1172220:intron | 60.0% | |
GCCTGACCCCGAGAAGACAA+GGG | - | chr8_1:2075432-2075451 | None:intergenic | 60.0% | |
AGCCTGACCCCGAGAAGACA+AGG | - | chr8_1:2075433-2075452 | None:intergenic | 60.0% | |
AGGCTCTCAGCAGACGCTTG+CGG | + | chr8_1:2081488-2081507 | Msa1172220:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 2073367 | 2081788 | 2073367 | ID=Msa1172220;Name=Msa1172220 |
chr8_1 | mRNA | 2073367 | 2081788 | 2073367 | ID=Msa1172220-mRNA-1;Parent=Msa1172220;Name=Msa1172220-mRNA-1;_AED=0.21;_eAED=0.21;_QI=428|0.92|0.92|1|0.92|0.92|14|230|501 |
chr8_1 | exon | 2073367 | 2073606 | 2073367 | ID=Msa1172220-mRNA-1:exon:757;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2073882 | 2074110 | 2073882 | ID=Msa1172220-mRNA-1:exon:758;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2074793 | 2074874 | 2074793 | ID=Msa1172220-mRNA-1:exon:759;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2074998 | 2075101 | 2074998 | ID=Msa1172220-mRNA-1:exon:760;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2075238 | 2075364 | 2075238 | ID=Msa1172220-mRNA-1:exon:761;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2075659 | 2075753 | 2075659 | ID=Msa1172220-mRNA-1:exon:762;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2076339 | 2076462 | 2076339 | ID=Msa1172220-mRNA-1:exon:763;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2077425 | 2077505 | 2077425 | ID=Msa1172220-mRNA-1:exon:764;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2077699 | 2077797 | 2077699 | ID=Msa1172220-mRNA-1:exon:765;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2077901 | 2078080 | 2077901 | ID=Msa1172220-mRNA-1:exon:766;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2078784 | 2078918 | 2078784 | ID=Msa1172220-mRNA-1:exon:767;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2079001 | 2079072 | 2079001 | ID=Msa1172220-mRNA-1:exon:768;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2080091 | 2080228 | 2080091 | ID=Msa1172220-mRNA-1:exon:769;Parent=Msa1172220-mRNA-1 |
chr8_1 | exon | 2081331 | 2081788 | 2081331 | ID=Msa1172220-mRNA-1:exon:770;Parent=Msa1172220-mRNA-1 |
chr8_1 | five_prime_UTR | 2073367 | 2073606 | 2073367 | ID=Msa1172220-mRNA-1:five_prime_utr;Parent=Msa1172220-mRNA-1 |
chr8_1 | five_prime_UTR | 2073882 | 2074069 | 2073882 | ID=Msa1172220-mRNA-1:five_prime_utr;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2074070 | 2074110 | 2074070 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2074793 | 2074874 | 2074793 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2074998 | 2075101 | 2074998 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2075238 | 2075364 | 2075238 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2075659 | 2075753 | 2075659 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2076339 | 2076462 | 2076339 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2077425 | 2077505 | 2077425 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2077699 | 2077797 | 2077699 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2077901 | 2078080 | 2077901 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2078784 | 2078918 | 2078784 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2079001 | 2079072 | 2079001 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2080091 | 2080228 | 2080091 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | CDS | 2081331 | 2081558 | 2081331 | ID=Msa1172220-mRNA-1:cds;Parent=Msa1172220-mRNA-1 |
chr8_1 | three_prime_UTR | 2081559 | 2081788 | 2081559 | ID=Msa1172220-mRNA-1:three_prime_utr;Parent=Msa1172220-mRNA-1 |
Gene Sequence |
Protein sequence |