Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0792100 | XP_024638454.1 | 99.601 | 501 | 2 | 0 | 1 | 501 | 1 | 501 | 0.0 | 1029 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0792100 | sp|P54567|YQKD_BACSU | 28.631 | 241 | 147 | 8 | 36 | 266 | 56 | 281 | 2.36e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0792100 | A0A072V3H8 | 99.402 | 502 | 2 | 1 | 1 | 501 | 1 | 502 | 0.0 | 1024 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0023150 | Msa0792100 | 0.810247 | 1.267300e-50 | -8.615850e-47 |
Msa0792100 | Msa1172220 | 0.940952 | 9.657489e-101 | -8.615850e-47 |
Msa0792100 | Msa1267270 | 0.910751 | 1.318944e-82 | -8.615850e-47 |
Msa0792100 | Msa1441180 | 0.815390 | 9.474361e-52 | -8.615850e-47 |
Msa0269290 | Msa0792100 | 0.978870 | 9.717736e-147 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0792100 | MtrunA17_Chr4g0076631 | 99.402 | 502 | 2 | 1 | 1 | 501 | 1 | 502 | 0.0 | 1024 |
Msa0792100 | MtrunA17_Chr2g0291031 | 68.263 | 501 | 119 | 5 | 1 | 501 | 1 | 461 | 0.0 | 638 |
Msa0792100 | MtrunA17_Chr4g0065941 | 68.792 | 298 | 90 | 1 | 2 | 299 | 1 | 295 | 3.50e-154 | 442 |
Msa0792100 | MtrunA17_Chr2g0287221 | 62.179 | 312 | 115 | 1 | 2 | 313 | 1 | 309 | 6.23e-146 | 429 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0792100 | AT4G17150.1 | 64.522 | 513 | 148 | 5 | 1 | 500 | 10 | 501 | 0.0 | 626 |
Msa0792100 | AT4G17150.4 | 71.182 | 406 | 106 | 4 | 1 | 398 | 10 | 412 | 0.0 | 558 |
Msa0792100 | AT4G17150.5 | 63.002 | 473 | 141 | 5 | 41 | 500 | 26 | 477 | 0.0 | 555 |
Msa0792100 | AT4G17150.3 | 76.796 | 362 | 82 | 1 | 1 | 360 | 10 | 371 | 0.0 | 549 |
Msa0792100 | AT4G17150.2 | 76.796 | 362 | 82 | 1 | 1 | 360 | 10 | 371 | 0.0 | 549 |
Msa0792100 | AT4G14290.2 | 71.429 | 287 | 82 | 0 | 2 | 288 | 1 | 287 | 5.96e-158 | 459 |
Msa0792100 | AT4G14290.1 | 71.429 | 287 | 82 | 0 | 2 | 288 | 1 | 287 | 8.94e-158 | 460 |
Msa0792100 | AT3G23540.1 | 67.657 | 303 | 95 | 1 | 2 | 301 | 1 | 303 | 1.30e-155 | 455 |
Msa0792100 | AT3G23540.3 | 69.091 | 275 | 82 | 1 | 30 | 301 | 2 | 276 | 1.66e-141 | 418 |
Msa0792100 | AT4G14290.5 | 72.532 | 233 | 64 | 0 | 56 | 288 | 1 | 233 | 2.23e-127 | 380 |
Msa0792100 | AT3G23540.2 | 67.500 | 160 | 49 | 1 | 145 | 301 | 1 | 160 | 3.40e-73 | 238 |
Msa0792100 | AT4G14290.3 | 70.714 | 140 | 41 | 0 | 149 | 288 | 33 | 172 | 1.14e-67 | 224 |
Msa0792100 | AT4G14290.4 | 70.803 | 137 | 40 | 0 | 152 | 288 | 1 | 137 | 3.82e-67 | 222 |
Find 149 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTGAGGTGTTTGGTGTTCT+TGG | 0.142159 | 5_3:-3209789 | Msa0792100:five_prime_UTR |
GTGGGATTTAGCCTTCTTTA+TGG | 0.167652 | 5_3:-3206887 | Msa0792100:intron |
CTCGAGAAATATTATGATTT+AGG | 0.172301 | 5_3:-3205188 | Msa0792100:CDS |
AAATATCCCGTATAGGTTTA+TGG | 0.173583 | 5_3:-3207509 | Msa0792100:CDS |
TTTAGGAATTGCCAAATATT+TGG | 0.181328 | 5_3:-3201611 | Msa0792100:three_prime_UTR |
TTCTCCCAATTAGGTTAAAA+TGG | 0.185844 | 5_3:-3205803 | Msa0792100:intron |
ATACTTCTTCTCAGCTTATT+TGG | 0.201453 | 5_3:-3209679 | Msa0792100:five_prime_UTR |
TTGCTAACAAGCCAAATATT+TGG | 0.214997 | 5_3:+3201600 | None:intergenic |
CTTGCGGCTTTGTCTTCTTA+AGG | 0.270780 | 5_3:-3201866 | Msa0792100:CDS |
GCCAATCAGAAACCAATATT+TGG | 0.276128 | 5_3:+3201681 | None:intergenic |
TTCTCAAATCTGTCACTCTT+TGG | 0.286897 | 5_3:+3201910 | None:intergenic |
TGCACACTTGCGGCTTCATC+AGG | 0.294214 | 5_3:+3204169 | None:intergenic |
AGTTGTGAAGAAAGAGAGAT+TGG | 0.297966 | 5_3:-3209269 | Msa0792100:five_prime_UTR |
TCGAGAAATATTATGATTTA+GGG | 0.306533 | 5_3:-3205187 | Msa0792100:CDS |
GAGGACATTGTAGAAGAAAA+TGG | 0.307349 | 5_3:+3205241 | None:intergenic |
TGGGGCAGGTGTTCTTCATT+AGG | 0.330333 | 5_3:-3203067 | Msa0792100:CDS |
TTCTATTGCTGGAATGGTAT+TGG | 0.336375 | 5_3:-3206852 | Msa0792100:CDS |
TTGCGGCTTTGTCTTCTTAA+GGG | 0.349769 | 5_3:-3201865 | Msa0792100:CDS |
ACCCTTGACTTCTCGGGGTC+AGG | 0.351572 | 5_3:-3207912 | Msa0792100:CDS |
GCCAAATATTGGTTTCTGAT+TGG | 0.356584 | 5_3:-3201682 | Msa0792100:three_prime_UTR |
GAGAATTACAGCCGCTTCAT+TGG | 0.360136 | 5_3:+3207959 | None:intergenic |
AATATCCCGTATAGGTTTAT+GGG | 0.365038 | 5_3:-3207508 | Msa0792100:CDS |
AATACCATTCCAGCAATAGA+AGG | 0.376973 | 5_3:+3206854 | None:intergenic |
GCCGAAGACCCTTCTATTGC+TGG | 0.379355 | 5_3:-3206863 | Msa0792100:CDS |
AAGCTCAAATAGAGAAAGTT+GGG | 0.381819 | 5_3:-3203086 | Msa0792100:CDS |
TTATATATTGCCATGGAAAC+AGG | 0.382845 | 5_3:-3208134 | Msa0792100:intron |
ATTACAATTAGATTGACTAT+TGG | 0.394016 | 5_3:+3201783 | None:intergenic |
AAATAAGCTGAGAAGAAGTA+TGG | 0.398646 | 5_3:+3209681 | None:intergenic |
TATGAAATTGAACTGTGTTC+TGG | 0.398736 | 5_3:-3205731 | Msa0792100:intron |
CTACCAAAGGCAGGATTTAG+AGG | 0.404625 | 5_3:-3208361 | Msa0792100:intron |
GAAAAGGAATTCTCTCTTGC+TGG | 0.411836 | 5_3:-3208390 | Msa0792100:CDS |
CGAAATGAAATGAAATGAAA+AGG | 0.413453 | 5_3:+3209622 | None:intergenic |
GATTTAGGGGATTTGAAACT+TGG | 0.415584 | 5_3:-3205173 | Msa0792100:CDS |
TGGTGTTCTTGGAATTGAAT+TGG | 0.420124 | 5_3:-3209778 | Msa0792100:five_prime_UTR |
ACAGATGACAATGATGGAAT+TGG | 0.425584 | 5_3:-3204193 | Msa0792100:CDS |
GGTCAATGGGCGCAGTTACT+AGG | 0.428894 | 5_3:-3207482 | Msa0792100:intron |
TTGCCTCTAAATCCTGCCTT+TGG | 0.430450 | 5_3:+3208358 | None:intergenic |
TTGTGGACGTTTATAAAATC+CGG | 0.430844 | 5_3:-3206790 | Msa0792100:CDS |
GTATCTTCAGGAAAAGGAAA+AGG | 0.432727 | 5_3:+3208171 | None:intergenic |
GGGGATTTGAAACTTGGTTC+CGG | 0.432780 | 5_3:-3205167 | Msa0792100:CDS |
CTTGCATGTCCAAATAAAAC+AGG | 0.434305 | 5_3:+3205495 | None:intergenic |
CTCAGCTTATTTGGTGGTGG+TGG | 0.435731 | 5_3:-3209670 | Msa0792100:five_prime_UTR |
GGACAGCTGGCTGAGGTGTT+TGG | 0.436350 | 5_3:-3209798 | Msa0792100:five_prime_UTR |
CTTCTCAGCTTATTTGGTGG+TGG | 0.438281 | 5_3:-3209673 | Msa0792100:five_prime_UTR |
GAGTGACAGATTTGAGAAGC+TGG | 0.441559 | 5_3:-3201905 | Msa0792100:CDS |
AGAGAGAGTACCGTGAACTT+TGG | 0.446970 | 5_3:+3206764 | None:intergenic |
AGATGACTTGTTTCTTCGAT+GGG | 0.453630 | 5_3:+3201837 | None:intergenic |
AGAGAAGTATCTTCAGGAAA+AGG | 0.459180 | 5_3:+3208165 | None:intergenic |
CTTCTTCTCAGCTTATTTGG+TGG | 0.459744 | 5_3:-3209676 | Msa0792100:five_prime_UTR |
ATGAGCAACAATCTTCAATC+TGG | 0.460440 | 5_3:+3203113 | None:intergenic |
GGCACCCTACTACATCAGTC+AGG | 0.465060 | 5_3:+3204309 | None:intergenic |
AAGATGACTTGTTTCTTCGA+TGG | 0.466764 | 5_3:+3201836 | None:intergenic |
CAAGGAAGAGAAGTATCTTC+AGG | 0.469007 | 5_3:+3208159 | None:intergenic |
CAAGCTCAAATAGAGAAAGT+TGG | 0.469326 | 5_3:-3203087 | Msa0792100:CDS |
GAGATAATGACTACACTTCA+AGG | 0.474252 | 5_3:+3208194 | None:intergenic |
TTTCCCACAGATACTGATCC+GGG | 0.477800 | 5_3:+3208409 | None:intergenic |
AAAACAGGAATGAATGTCTT+CGG | 0.479091 | 5_3:+3205510 | None:intergenic |
TCCAGCAATAGAAGGGTCTT+CGG | 0.485556 | 5_3:+3206862 | None:intergenic |
GAGATTATATAAGTTTGAAA+AGG | 0.488604 | 5_3:+3206823 | None:intergenic |
AAAAGAATAAATTGATAAGA+GGG | 0.488945 | 5_3:-3209828 | Msa0792100:five_prime_UTR |
ATTGTGGCCGGGAGGAATTA+TGG | 0.491620 | 5_3:+3205282 | None:intergenic |
TGATGAAGCCGCAAGTGTGC+AGG | 0.493167 | 5_3:-3204167 | Msa0792100:intron |
GAGAAGAAGTATGGTTAGAG+AGG | 0.493381 | 5_3:+3209690 | None:intergenic |
AAAACACAAATTTCGTGTGT+AGG | 0.494347 | 5_3:-3201754 | Msa0792100:three_prime_UTR |
AACAAACAAATATCCCGTAT+AGG | 0.496030 | 5_3:-3207516 | Msa0792100:CDS |
GAAATGAAATGAAATGAAAA+GGG | 0.497133 | 5_3:+3209623 | None:intergenic |
TAATGATAACAGCGAAATGA+AGG | 0.502100 | 5_3:+3201659 | None:intergenic |
CTCTAAATCCTGCCTTTGGT+AGG | 0.502347 | 5_3:+3208362 | None:intergenic |
TGCTGATGATAAGCTCTCTC+AGG | 0.502510 | 5_3:-3203011 | Msa0792100:intron |
AATTGATAAGAGGGAAAGAA+AGG | 0.506532 | 5_3:-3209819 | Msa0792100:five_prime_UTR |
TGGTAGCTTAGCTCAGACTT+TGG | 0.510902 | 5_3:-3209650 | Msa0792100:five_prime_UTR |
TTAAATGATGCAGTGGATGT+AGG | 0.518787 | 5_3:-3207989 | Msa0792100:intron |
AGATGAAAAGAAGCCGAAGA+AGG | 0.519297 | 5_3:-3201974 | Msa0792100:CDS |
AGACCCTTCTATTGCTGGAA+TGG | 0.522988 | 5_3:-3206858 | Msa0792100:CDS |
GAAACTACAGATGACAATGA+TGG | 0.526697 | 5_3:-3204199 | Msa0792100:CDS |
GGATCAGTATCTGTGGGAAA+AGG | 0.529501 | 5_3:-3208406 | Msa0792100:CDS |
ATTTCGTTATTCGCCCTCCC+AGG | 0.531333 | 5_3:-3209125 | Msa0792100:intron |
ATCATAAAAGAATTGTGGCC+GGG | 0.532049 | 5_3:+3205271 | None:intergenic |
AGATTGTGGTGTCGCATTTG+AGG | 0.532944 | 5_3:-3207542 | Msa0792100:CDS |
AAGAATAATAATACCTGGGA+GGG | 0.533025 | 5_3:+3209112 | None:intergenic |
TCGGGGTCAGGCTTATCTGA+TGG | 0.533663 | 5_3:-3207900 | Msa0792100:CDS |
GCGGCGGGTTATTGAGAAGA+AGG | 0.534978 | 5_3:-3205767 | Msa0792100:CDS |
TATCTTCAGGAAAAGGAAAA+GGG | 0.536605 | 5_3:+3208172 | None:intergenic |
GGCAGGTGTTCTTCATTAGG+AGG | 0.539678 | 5_3:-3203064 | Msa0792100:CDS |
CCTTGTGTTATATATTGCCA+TGG | 0.540136 | 5_3:-3208141 | Msa0792100:CDS |
GATGAAAAGAAGCCGAAGAA+GGG | 0.543208 | 5_3:-3201973 | Msa0792100:CDS |
GTATCTATCTTATAGCCACT+TGG | 0.543355 | 5_3:+3209170 | None:intergenic |
TGTAGTTTCATCTTCAAGCA+AGG | 0.545400 | 5_3:+3204213 | None:intergenic |
GTACCGTGAACTTTGGAAGC+CGG | 0.545459 | 5_3:+3206771 | None:intergenic |
AGCCTGACCCCGAGAAGTCA+AGG | 0.546559 | 5_3:+3207910 | None:intergenic |
AAACTTATATAATCTCATGA+TGG | 0.546998 | 5_3:-3206816 | Msa0792100:CDS |
TAATCTCATGATGGAGCTTG+TGG | 0.547533 | 5_3:-3206807 | Msa0792100:CDS |
ACTTGGTTCCGGTGTGGATG+AGG | 0.547607 | 5_3:-3205156 | Msa0792100:intron |
TTCTCTTTCATACTTCGCAA+AGG | 0.549432 | 5_3:+3202015 | None:intergenic |
AATCATAAAAGAATTGTGGC+CGG | 0.549501 | 5_3:+3205270 | None:intergenic |
GTAACACATACCTGTTTCCA+TGG | 0.551077 | 5_3:+3208124 | None:intergenic |
GTATTAAATTAATACCGCAT+AGG | 0.557960 | 5_3:+3205425 | None:intergenic |
AGGCTCTCAGCAGACGCTTG+CGG | 0.561762 | 5_3:-3201882 | Msa0792100:CDS |
GGCTGTACAATACATGCGGC+GGG | 0.564086 | 5_3:-3205782 | Msa0792100:CDS |
AGAGGGAAAGAAAGGACAGC+TGG | 0.565313 | 5_3:-3209811 | Msa0792100:five_prime_UTR |
TATGATATGATATACAAAAG+AGG | 0.565995 | 5_3:+3201811 | None:intergenic |
ATATCCCGTATAGGTTTATG+GGG | 0.567406 | 5_3:-3207507 | Msa0792100:CDS |
TAAATGATGCAGTGGATGTA+GGG | 0.568274 | 5_3:-3207988 | Msa0792100:intron |
CAAATAGAGAAAGTTGGGGC+AGG | 0.573325 | 5_3:-3203081 | Msa0792100:CDS |
ACTGAATCATAAAAGAATTG+TGG | 0.574633 | 5_3:+3205266 | None:intergenic |
ATGGCGACCATAATTCCTCC+CGG | 0.574950 | 5_3:-3205289 | Msa0792100:CDS |
ACACTTCAAGGTATAGCCTC+TGG | 0.577166 | 5_3:+3208206 | None:intergenic |
GTAGTTTCATCTTCAAGCAA+GGG | 0.578611 | 5_3:+3204214 | None:intergenic |
GGTCTTCGGCTCCATAAAGA+AGG | 0.579635 | 5_3:+3206876 | None:intergenic |
AAAGAAAGGACAGCTGGCTG+AGG | 0.581463 | 5_3:-3209805 | Msa0792100:five_prime_UTR |
GATGGAGACTATGTCAGCCT+TGG | 0.581558 | 5_3:-3207882 | Msa0792100:CDS |
GCACCCTACTACATCAGTCA+GGG | 0.585755 | 5_3:+3204310 | None:intergenic |
ATGAAATGAAATGAAAAGGG+TGG | 0.589383 | 5_3:+3209626 | None:intergenic |
GAAAGATGATCTGAAGATTG+TGG | 0.598855 | 5_3:-3207556 | Msa0792100:CDS |
AATCCGGCTTCCAAAGTTCA+CGG | 0.601063 | 5_3:-3206774 | Msa0792100:intron |
TGGTAGAACCTACCAAAGGC+AGG | 0.601644 | 5_3:-3208370 | Msa0792100:CDS |
TGAAATGAAATGAAAAGGGT+GGG | 0.607773 | 5_3:+3209627 | None:intergenic |
GAGACTATGTCAGCCTTGGT+TGG | 0.607802 | 5_3:-3207878 | Msa0792100:CDS |
AAAGATAACCTGCACACTTG+CGG | 0.608984 | 5_3:+3204159 | None:intergenic |
CGAGAAATATTATGATTTAG+GGG | 0.610738 | 5_3:-3205186 | Msa0792100:CDS |
AACTTACTTCGTGCCAACCA+AGG | 0.612981 | 5_3:+3207865 | None:intergenic |
GCACACTTGCGGCTTCATCA+GGG | 0.613086 | 5_3:+3204170 | None:intergenic |
TTTGAAACTTGGTTCCGGTG+TGG | 0.615743 | 5_3:-3205162 | Msa0792100:CDS |
ATACCATTCCAGCAATAGAA+GGG | 0.616504 | 5_3:+3206855 | None:intergenic |
CCATGGCAATATATAACACA+AGG | 0.617756 | 5_3:+3208141 | None:intergenic |
CAATAGAGACTTGAGGAGGA+CGG | 0.628343 | 5_3:+3205219 | None:intergenic |
ATTCATTTCATGACGCCAAG+TGG | 0.629844 | 5_3:-3209185 | Msa0792100:five_prime_UTR |
GTTAAATACCTCATCCACAC+CGG | 0.635215 | 5_3:+3205148 | None:intergenic |
TGGCTGTACAATACATGCGG+CGG | 0.639633 | 5_3:-3205783 | Msa0792100:CDS |
TCAGCAATAGAGACTTGAGG+AGG | 0.640185 | 5_3:+3205215 | None:intergenic |
GCCTGACCCCGAGAAGTCAA+GGG | 0.640197 | 5_3:+3207911 | None:intergenic |
TAGGGCAGATGCCAATGAAG+CGG | 0.642371 | 5_3:-3207970 | Msa0792100:CDS |
ATAACCCGGATCAGTATCTG+TGG | 0.647394 | 5_3:-3208413 | Msa0792100:CDS |
ACACAGGGCGGACTATAACC+CGG | 0.648856 | 5_3:-3208427 | Msa0792100:intron |
GTCATGTCAGAATACTGTGA+AGG | 0.652766 | 5_3:-3202049 | Msa0792100:intron |
ACGAGATTCTCTCTAGTCTG+CGG | 0.652977 | 5_3:-3204424 | Msa0792100:CDS |
AAAGAATAATAATACCTGGG+AGG | 0.656822 | 5_3:+3209111 | None:intergenic |
TGACAGATTTGAGAAGCTGG+AGG | 0.661868 | 5_3:-3201902 | Msa0792100:CDS |
TAACCCGGATCAGTATCTGT+GGG | 0.666671 | 5_3:-3208412 | Msa0792100:CDS |
AGCTCAAATAGAGAAAGTTG+GGG | 0.674107 | 5_3:-3203085 | Msa0792100:CDS |
AAATGGCTGTACAATACATG+CGG | 0.675349 | 5_3:-3205786 | Msa0792100:CDS |
TTGCTGGTAGAACCTACCAA+AGG | 0.679162 | 5_3:-3208374 | Msa0792100:CDS |
CACCCTACTACATCAGTCAG+GGG | 0.681270 | 5_3:+3204311 | None:intergenic |
GTGCAGCTCAAGAATGCCAG+AGG | 0.686724 | 5_3:-3208222 | Msa0792100:intron |
ATAAAAGAATTGTGGCCGGG+AGG | 0.694195 | 5_3:+3205274 | None:intergenic |
TAGAGACTTGAGGAGGACGG+AGG | 0.699920 | 5_3:+3205222 | None:intergenic |
TATCCCGTATAGGTTTATGG+GGG | 0.742479 | 5_3:-3207506 | Msa0792100:CDS |
GAGATGAGATCAGAGTGATG+CGG | 0.757183 | 5_3:+3205453 | None:intergenic |
TCTCATCTCAGAATCCTATG+CGG | 0.772408 | 5_3:-3205439 | Msa0792100:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTGATTAAGATTTTATTT+TGG | - | chr5_3:3205002-3205021 | Msa0792100:intron | 10.0% |
!! | AAAAATATCATTAAATTTGA+TGG | - | chr5_3:3206135-3206154 | Msa0792100:intron | 10.0% |
!! | AAAGTAACAATAATAATTTA+TGG | + | chr5_3:3206883-3206902 | None:intergenic | 10.0% |
!! | AATTATATTGTAATTATGTT+AGG | + | chr5_3:3208618-3208637 | None:intergenic | 10.0% |
!! | AAAAAAGGAAAAAAAAAAAA+AGG | - | chr5_3:3208767-3208786 | Msa0792100:intron | 10.0% |
!! | AAAAAGAATAAATTGATAAG+AGG | - | chr5_3:3201614-3201633 | Msa0792100:three_prime_UTR | 15.0% |
!! | AAAAGAATAAATTGATAAGA+GGG | - | chr5_3:3201615-3201634 | Msa0792100:three_prime_UTR | 15.0% |
!! | AAAAAAGAATAATAATACCT+GGG | + | chr5_3:3202338-3202357 | None:intergenic | 15.0% |
!! | TAAAAAAGAATAATAATACC+TGG | + | chr5_3:3202339-3202358 | None:intergenic | 15.0% |
!!! | TCTTTTTTATTCATCAAATT+TGG | - | chr5_3:3202350-3202369 | Msa0792100:intron | 15.0% |
!!! | AAAACTTTTTGAAATAGTAT+GGG | + | chr5_3:3202771-3202790 | None:intergenic | 15.0% |
!! | AAGTTAGATAGAAATATATA+TGG | - | chr5_3:3204029-3204048 | Msa0792100:intron | 15.0% |
!! | AAATTGTTAAAACAAAAGTT+GGG | - | chr5_3:3205067-3205086 | Msa0792100:intron | 15.0% |
!!! | CAAAGAACATAATTTTTTTT+GGG | + | chr5_3:3206374-3206393 | None:intergenic | 15.0% |
!!! | ACAAAGAACATAATTTTTTT+TGG | + | chr5_3:3206375-3206394 | None:intergenic | 15.0% |
!!! | ATGGTAATATTTAAGTTATA+TGG | - | chr5_3:3206580-3206599 | Msa0792100:intron | 15.0% |
!! | TAAAATTGAAGATATTAACT+TGG | - | chr5_3:3206627-3206646 | Msa0792100:intron | 15.0% |
!! | AAAATGGAAAAACAAAAAAA+AGG | - | chr5_3:3206694-3206713 | Msa0792100:intron | 15.0% |
!! | AACATTATCATGATTATATA+TGG | - | chr5_3:3206821-3206840 | Msa0792100:CDS | 15.0% |
!!! | TTATTATTGTTACTTTTTTG+TGG | - | chr5_3:3206887-3206906 | Msa0792100:intron | 15.0% |
!!! | TTTTATATTAGTATGGTTTT+AGG | - | chr5_3:3206915-3206934 | Msa0792100:intron | 15.0% |
!!! | AACTAAATAGAAAGTTTTTT+TGG | + | chr5_3:3207185-3207204 | None:intergenic | 15.0% |
!! | TAAAATATAATTCACGAAAT+CGG | + | chr5_3:3207658-3207677 | None:intergenic | 15.0% |
!! | ATGCTAAAATTATAAAAATG+TGG | + | chr5_3:3208259-3208278 | None:intergenic | 15.0% |
!!! | TTTTTTTCCTTTTTTAGTTT+TGG | + | chr5_3:3208762-3208781 | None:intergenic | 15.0% |
!! | GAAATGAAATGAAATGAAAA+GGG | + | chr5_3:3201823-3201842 | None:intergenic | 20.0% |
!!! | CTTTTCATTTCATTTCATTT+CGG | - | chr5_3:3201822-3201841 | Msa0792100:exon | 20.0% |
!!! | ACTACTACTTTTTCATTTTT+CGG | - | chr5_3:3202066-3202085 | Msa0792100:intron | 20.0% |
!!! | ATTTTAATAAGCTATATTGG+AGG | + | chr5_3:3202492-3202511 | None:intergenic | 20.0% |
!!! | GGTATTTTAATAAGCTATAT+TGG | + | chr5_3:3202495-3202514 | None:intergenic | 20.0% |
!!! | AAACATCATATTAACTTGTT+TGG | + | chr5_3:3202634-3202653 | None:intergenic | 20.0% |
!!! | ATGTTTATCTTCTTTTGATT+TGG | - | chr5_3:3202700-3202719 | Msa0792100:intron | 20.0% |
!!! | AAACTTTTTGAAATAGTATG+GGG | + | chr5_3:3202770-3202789 | None:intergenic | 20.0% |
!!! | CAAAACTTTTTGAAATAGTA+TGG | + | chr5_3:3202772-3202791 | None:intergenic | 20.0% |
!!! | CATACTATTTCAAAAAGTTT+TGG | - | chr5_3:3202770-3202789 | Msa0792100:intron | 20.0% |
!!! | AGTATCGAGTATTTATTTTA+TGG | - | chr5_3:3203107-3203126 | Msa0792100:CDS | 20.0% |
!!! | GTATCGAGTATTTATTTTAT+GGG | - | chr5_3:3203108-3203127 | Msa0792100:CDS | 20.0% |
!! | GTAAAAACAGTAATATTTGA+TGG | + | chr5_3:3203513-3203532 | None:intergenic | 20.0% |
!!! | ATTAAGAATTTATGCTGTTT+TGG | - | chr5_3:3204137-3204156 | Msa0792100:intron | 20.0% |
!!! | AATATTTTTGTTTCAAACAC+AGG | + | chr5_3:3204326-3204345 | None:intergenic | 20.0% |
!! | GAGATTATATAAGTTTGAAA+AGG | + | chr5_3:3204623-3204642 | None:intergenic | 20.0% |
!! | AAACTTATATAATCTCATGA+TGG | - | chr5_3:3204627-3204646 | Msa0792100:intron | 20.0% |
!!! | TTCAAGTCTTTTACAATAAA+GGG | + | chr5_3:3204760-3204779 | None:intergenic | 20.0% |
!!! | TTTCAAGTCTTTTACAATAA+AGG | + | chr5_3:3204761-3204780 | None:intergenic | 20.0% |
!!! | TAATTTCCTTTTTGTTAAGA+TGG | - | chr5_3:3204935-3204954 | Msa0792100:intron | 20.0% |
!!! | TAAGATTTTATTTTGGATCT+AGG | - | chr5_3:3205009-3205028 | Msa0792100:intron | 20.0% |
!!! | AAGATTTTATTTTGGATCTA+GGG | - | chr5_3:3205010-3205029 | Msa0792100:intron | 20.0% |
!!! | AATTATAGCTCTTTTTTACT+AGG | - | chr5_3:3205044-3205063 | Msa0792100:intron | 20.0% |
!! | GAAATTGTTAAAACAAAAGT+TGG | - | chr5_3:3205066-3205085 | Msa0792100:intron | 20.0% |
!! | AATTGTTAAAACAAAAGTTG+GGG | - | chr5_3:3205068-3205087 | Msa0792100:intron | 20.0% |
!! | ATTATTAATCATGACAAGTT+TGG | - | chr5_3:3205092-3205111 | Msa0792100:intron | 20.0% |
!!! | GAATATACTTTTATTTTGCA+TGG | - | chr5_3:3205129-3205148 | Msa0792100:intron | 20.0% |
!! | AACTAGTATCATGTATAATT+AGG | - | chr5_3:3205226-3205245 | Msa0792100:CDS | 20.0% |
!! | AAAAAAATCTTTATGCATTG+TGG | + | chr5_3:3205274-3205293 | None:intergenic | 20.0% |
!! | TATATAGTTGTATACCAATT+TGG | + | chr5_3:3205373-3205392 | None:intergenic | 20.0% |
!!! | TGATTTTATAACTTTTATGC+TGG | - | chr5_3:3205517-3205536 | Msa0792100:CDS | 20.0% |
!!! | GCATTAATTTAAGATAGAAA+TGG | + | chr5_3:3205892-3205911 | None:intergenic | 20.0% |
!!! | TAAACAGAAGTTAGATATTT+TGG | + | chr5_3:3206098-3206117 | None:intergenic | 20.0% |
!! | TCGAGAAATATTATGATTTA+GGG | - | chr5_3:3206256-3206275 | Msa0792100:intron | 20.0% |
!! | ACATTTAACTAAATTCTTTG+AGG | + | chr5_3:3206536-3206555 | None:intergenic | 20.0% |
!! | TTATCCATTACTTATAATGT+AGG | - | chr5_3:3207204-3207223 | Msa0792100:intron | 20.0% |
!! | TACATGTAAAATAAAATTCC+TGG | + | chr5_3:3207340-3207359 | None:intergenic | 20.0% |
!!! | AGGAATTTTATTTTACATGT+AGG | - | chr5_3:3207339-3207358 | Msa0792100:intron | 20.0% |
!! | AGTAAATAAAATACTAGCAA+AGG | + | chr5_3:3207632-3207651 | None:intergenic | 20.0% |
!! | TTAAGAAAAGTTAATCTCAA+AGG | + | chr5_3:3207815-3207834 | None:intergenic | 20.0% |
!! | GAGTAGTTTATTATAAGAAA+AGG | - | chr5_3:3208060-3208079 | Msa0792100:intron | 20.0% |
!!! | AAAGTATTTTTTCTCAAATG+CGG | + | chr5_3:3209232-3209251 | None:intergenic | 20.0% |
!! | TATGATATGATATACAAAAG+AGG | + | chr5_3:3209635-3209654 | None:intergenic | 20.0% |
!! | ATTACAATTAGATTGACTAT+TGG | + | chr5_3:3209663-3209682 | None:intergenic | 20.0% |
! | CGAAATGAAATGAAATGAAA+AGG | + | chr5_3:3201824-3201843 | None:intergenic | 25.0% |
!! | TTTTCGACTTTAATCTTTCT+TGG | + | chr5_3:3201908-3201927 | None:intergenic | 25.0% |
! | ACAAGCAAGTTTATGAAATA+TGG | + | chr5_3:3201988-3202007 | None:intergenic | 25.0% |
!!! | TCAATGTCATACTACTTTTA+AGG | - | chr5_3:3202023-3202042 | Msa0792100:CDS | 25.0% |
!!! | CAATGTCATACTACTTTTAA+GGG | - | chr5_3:3202024-3202043 | Msa0792100:CDS | 25.0% |
!!! | CTACTACTTTTTCATTTTTC+GGG | - | chr5_3:3202067-3202086 | Msa0792100:intron | 25.0% |
! | AAACAATCTCACAAAACTTA+TGG | + | chr5_3:3202405-3202424 | None:intergenic | 25.0% |
!!! | ATAAGTTTTGTGAGATTGTT+TGG | - | chr5_3:3202404-3202423 | Msa0792100:intron | 25.0% |
!!! | CATAAGCTATTTTATAGCAA+AGG | + | chr5_3:3202556-3202575 | None:intergenic | 25.0% |
! | ATAATGAGAACTATCTAACA+TGG | + | chr5_3:3202834-3202853 | None:intergenic | 25.0% |
! | CAATTATTGTTGCCTATATA+TGG | - | chr5_3:3203137-3203156 | Msa0792100:intron | 25.0% |
! | AAATAAACACATTCACAAAG+AGG | + | chr5_3:3203605-3203624 | None:intergenic | 25.0% |
! | TATGTCATATTATCCTTAGT+TGG | - | chr5_3:3203696-3203715 | Msa0792100:intron | 25.0% |
! | CAAAAAACACATTCATAAAG+AGG | + | chr5_3:3203736-3203755 | None:intergenic | 25.0% |
! | TAAATCGGAAAAACATAAAG+CGG | - | chr5_3:3204360-3204379 | Msa0792100:CDS | 25.0% |
! | ATGTATACAGAGAAAATGTA+AGG | + | chr5_3:3204482-3204501 | None:intergenic | 25.0% |
! | TACTTTCCATCTTAACAAAA+AGG | + | chr5_3:3204944-3204963 | None:intergenic | 25.0% |
! | AAGATGGAAAGTAAAGAAAA+AGG | - | chr5_3:3204951-3204970 | Msa0792100:intron | 25.0% |
! | AAGTATATTCTTCAATCCTA+GGG | + | chr5_3:3204980-3204999 | None:intergenic | 25.0% |
! | TAAGTATATTCTTCAATCCT+AGG | + | chr5_3:3204981-3205000 | None:intergenic | 25.0% |
! | AAAAGAGCTATAATTATGAG+AGG | + | chr5_3:3205039-3205058 | None:intergenic | 25.0% |
!!! | ATTTTGCATGGTTGTTTTTA+AGG | - | chr5_3:3205141-3205160 | Msa0792100:intron | 25.0% |
!!! | TTTTGCATGGTTGTTTTTAA+GGG | - | chr5_3:3205142-3205161 | Msa0792100:intron | 25.0% |
!!! | TGAACTATTTTTTAAGCTGT+AGG | - | chr5_3:3205307-3205326 | Msa0792100:CDS | 25.0% |
! | AGCTGAAAATCAAAATATGT+GGG | + | chr5_3:3205343-3205362 | None:intergenic | 25.0% |
! | GTATACAACTATATATGCAT+TGG | - | chr5_3:3205378-3205397 | Msa0792100:intron | 25.0% |
!!! | TATGCATTGGATTTACTTTT+AGG | - | chr5_3:3205391-3205410 | Msa0792100:intron | 25.0% |
! | TCATTCAATCAAACAATACA+CGG | + | chr5_3:3205455-3205474 | None:intergenic | 25.0% |
! | AAACAAAATATGATCGATGA+AGG | + | chr5_3:3205795-3205814 | None:intergenic | 25.0% |
!!! | ACATTCATTCCTGTTTTATT+TGG | - | chr5_3:3205939-3205958 | Msa0792100:intron | 25.0% |
! | GTATTAAATTAATACCGCAT+AGG | + | chr5_3:3206021-3206040 | None:intergenic | 25.0% |
!!! | GTTAGATATTTTGGCTATTA+AGG | + | chr5_3:3206089-3206108 | None:intergenic | 25.0% |
! | ACTTCTGTTTATGAATTTGT+AGG | - | chr5_3:3206107-3206126 | Msa0792100:intron | 25.0% |
! | CTTCTGTTTATGAATTTGTA+GGG | - | chr5_3:3206108-3206127 | Msa0792100:intron | 25.0% |
! | ACTGAATCATAAAAGAATTG+TGG | + | chr5_3:3206180-3206199 | None:intergenic | 25.0% |
! | CTCGAGAAATATTATGATTT+AGG | - | chr5_3:3206255-3206274 | Msa0792100:intron | 25.0% |
! | CGAGAAATATTATGATTTAG+GGG | - | chr5_3:3206257-3206276 | Msa0792100:intron | 25.0% |
! | TTATTTGTGAACTAACGAAA+TGG | - | chr5_3:3206561-3206580 | Msa0792100:intron | 25.0% |
! | AATGTTTCCAAAAACTGAAA+TGG | + | chr5_3:3206807-3206826 | None:intergenic | 25.0% |
!!! | GGCATTGTTTTATATTAGTA+TGG | - | chr5_3:3206908-3206927 | Msa0792100:intron | 25.0% |
! | AAAAAATAGACAGAAGGTTA+AGG | + | chr5_3:3207158-3207177 | None:intergenic | 25.0% |
! | TTGTCTGTGAAATTAAGAAA+TGG | - | chr5_3:3207313-3207332 | Msa0792100:intron | 25.0% |
!! | AAACTGCAAATGCAATTTTA+AGG | - | chr5_3:3207697-3207716 | Msa0792100:intron | 25.0% |
!!! | TGCAATTTTAAGGTTACTTT+CGG | - | chr5_3:3207707-3207726 | Msa0792100:intron | 25.0% |
! | AAAACTAAGTCTTGATTGAA+TGG | - | chr5_3:3207998-3208017 | Msa0792100:intron | 25.0% |
! | AAACTAAGTCTTGATTGAAT+GGG | - | chr5_3:3207999-3208018 | Msa0792100:intron | 25.0% |
!! | TTTCATTAGTAGACTTTTTG+TGG | - | chr5_3:3208029-3208048 | Msa0792100:intron | 25.0% |
!!! | TTTTAAGTGTTGTTTTACTC+TGG | - | chr5_3:3208125-3208144 | Msa0792100:intron | 25.0% |
!! | TTGACCATTAATGACTTTTA+GGG | - | chr5_3:3208295-3208314 | Msa0792100:intron | 25.0% |
! | CCTTGCTTATATATATTTCA+TGG | + | chr5_3:3208723-3208742 | None:intergenic | 25.0% |
! | CCATGAAATATATATAAGCA+AGG | - | chr5_3:3208720-3208739 | Msa0792100:intron | 25.0% |
!!! | TTTAGTTTTGGACCTAAATT+TGG | + | chr5_3:3208750-3208769 | None:intergenic | 25.0% |
! | TTTAGGTCCAAAACTAAAAA+AGG | - | chr5_3:3208752-3208771 | Msa0792100:intron | 25.0% |
! | AAAAAAAAAAAAGGACACCA+AGG | - | chr5_3:3208776-3208795 | Msa0792100:intron | 25.0% |
! | AAAAAAAAAAAGGACACCAA+GGG | - | chr5_3:3208777-3208796 | Msa0792100:intron | 25.0% |
! | AAAAGTGAGAATTTGAGAAA+TGG | + | chr5_3:3208942-3208961 | None:intergenic | 25.0% |
! | AGAATAGAAGATGTAGAAAT+TGG | - | chr5_3:3209081-3209100 | Msa0792100:intron | 25.0% |
! | GAATAGAAGATGTAGAAATT+GGG | - | chr5_3:3209082-3209101 | Msa0792100:intron | 25.0% |
! | AATAGAAGATGTAGAAATTG+GGG | - | chr5_3:3209083-3209102 | Msa0792100:intron | 25.0% |
!!! | TTTTAGGAATTGCCAAATAT+TGG | - | chr5_3:3209750-3209769 | Msa0792100:five_prime_UTR | 25.0% |
! | TTTAGGAATTGCCAAATATT+TGG | - | chr5_3:3209751-3209770 | Msa0792100:five_prime_UTR | 25.0% |
AATTGATAAGAGGGAAAGAA+AGG | - | chr5_3:3201624-3201643 | Msa0792100:three_prime_UTR | 30.0% | |
AAATAAGCTGAGAAGAAGTA+TGG | + | chr5_3:3201765-3201784 | None:intergenic | 30.0% | |
ATACTTCTTCTCAGCTTATT+TGG | - | chr5_3:3201764-3201783 | Msa0792100:three_prime_UTR | 30.0% | |
TGAAATGAAATGAAAAGGGT+GGG | + | chr5_3:3201819-3201838 | None:intergenic | 30.0% | |
ATGAAATGAAATGAAAAGGG+TGG | + | chr5_3:3201820-3201839 | None:intergenic | 30.0% | |
ACTTTAATCTTTCTTGGCTT+GGG | + | chr5_3:3201902-3201921 | None:intergenic | 30.0% | |
! | TGCGTCAATTTTTCATCATT+TGG | - | chr5_3:3201930-3201949 | Msa0792100:CDS | 30.0% |
! | GCGTCAATTTTTCATCATTT+GGG | - | chr5_3:3201931-3201950 | Msa0792100:CDS | 30.0% |
! | GATTCTTTTAAACTTCTCAC+AGG | - | chr5_3:3202089-3202108 | Msa0792100:intron | 30.0% |
TTTAAACTTCTCACAGGAAT+TGG | - | chr5_3:3202095-3202114 | Msa0792100:intron | 30.0% | |
CACAACTCAAAAAGTCAAAT+TGG | + | chr5_3:3202161-3202180 | None:intergenic | 30.0% | |
AAGAATAATAATACCTGGGA+GGG | + | chr5_3:3202334-3202353 | None:intergenic | 30.0% | |
AAAGAATAATAATACCTGGG+AGG | + | chr5_3:3202335-3202354 | None:intergenic | 30.0% | |
TAAGATAAGCTGCTCAAATA+AGG | + | chr5_3:3202380-3202399 | None:intergenic | 30.0% | |
ATGTTTCTTTCTTCACTAAG+AGG | - | chr5_3:3202648-3202667 | Msa0792100:intron | 30.0% | |
TTGCAAATTGAGTTACAGTT+TGG | - | chr5_3:3202973-3202992 | Msa0792100:intron | 30.0% | |
TGCAAATTGAGTTACAGTTT+GGG | - | chr5_3:3202974-3202993 | Msa0792100:intron | 30.0% | |
TATTGTTGCCTATATATGGA+AGG | - | chr5_3:3203141-3203160 | Msa0792100:intron | 30.0% | |
TATCTTCAGGAAAAGGAAAA+GGG | + | chr5_3:3203274-3203293 | None:intergenic | 30.0% | |
TTATATATTGCCATGGAAAC+AGG | - | chr5_3:3203309-3203328 | Msa0792100:intron | 30.0% | |
!!! | ACAGGTATGTGTTACTTTTA+TGG | - | chr5_3:3203327-3203346 | Msa0792100:intron | 30.0% |
ACAAGTACACATATCAAAAG+GGG | + | chr5_3:3203433-3203452 | None:intergenic | 30.0% | |
CACAAGTACACATATCAAAA+GGG | + | chr5_3:3203434-3203453 | None:intergenic | 30.0% | |
ACACAAGTACACATATCAAA+AGG | + | chr5_3:3203435-3203454 | None:intergenic | 30.0% | |
AACAAACAAATATCCCGTAT+AGG | - | chr5_3:3203927-3203946 | Msa0792100:intron | 30.0% | |
AAATATCCCGTATAGGTTTA+TGG | - | chr5_3:3203934-3203953 | Msa0792100:intron | 30.0% | |
AATATCCCGTATAGGTTTAT+GGG | - | chr5_3:3203935-3203954 | Msa0792100:intron | 30.0% | |
TAGAACATTATTGCATCGTT+TGG | - | chr5_3:3204059-3204078 | Msa0792100:intron | 30.0% | |
AAATCGGAAAAACATAAAGC+GGG | - | chr5_3:3204361-3204380 | Msa0792100:CDS | 30.0% | |
!! | TAATGTTCACTTTGCTTTTG+TGG | - | chr5_3:3204537-3204556 | Msa0792100:intron | 30.0% |
!! | AATGTTCACTTTGCTTTTGT+GGG | - | chr5_3:3204538-3204557 | Msa0792100:intron | 30.0% |
TTGTGGACGTTTATAAAATC+CGG | - | chr5_3:3204653-3204672 | Msa0792100:intron | 30.0% | |
! | TCTTTTACAATAAAGGGAGT+TGG | + | chr5_3:3204754-3204773 | None:intergenic | 30.0% |
!!! | TTTGCATGGTTGTTTTTAAG+GGG | - | chr5_3:3205143-3205162 | Msa0792100:intron | 30.0% |
ATGATACTAGTTGAAACTCT+CGG | + | chr5_3:3205218-3205237 | None:intergenic | 30.0% | |
!!! | ATTTTTTAAGCTGTAGGTGT+AGG | - | chr5_3:3205313-3205332 | Msa0792100:CDS | 30.0% |
GAGCTGAAAATCAAAATATG+TGG | + | chr5_3:3205344-3205363 | None:intergenic | 30.0% | |
GTTTGATTGAATGAATGAAC+TGG | - | chr5_3:3205461-3205480 | Msa0792100:CDS | 30.0% | |
GTTATAAAATCACGCAAACT+AGG | + | chr5_3:3205509-3205528 | None:intergenic | 30.0% | |
! | GTCTAGTATGTTTGTTAAGT+CGG | - | chr5_3:3205602-3205621 | Msa0792100:intron | 30.0% |
TTCTCCCAATTAGGTTAAAA+TGG | - | chr5_3:3205640-3205659 | Msa0792100:intron | 30.0% | |
!! | ACAGCCATTTTAACCTAATT+GGG | + | chr5_3:3205647-3205666 | None:intergenic | 30.0% |
!! | TACAGCCATTTTAACCTAAT+TGG | + | chr5_3:3205648-3205667 | None:intergenic | 30.0% |
TATGAAATTGAACTGTGTTC+TGG | - | chr5_3:3205712-3205731 | Msa0792100:intron | 30.0% | |
!!! | TTAATGCTTTTAAAGCGTAC+AGG | - | chr5_3:3205905-3205924 | Msa0792100:intron | 30.0% |
AAAACAGGAATGAATGTCTT+CGG | + | chr5_3:3205936-3205955 | None:intergenic | 30.0% | |
AATCATAAAAGAATTGTGGC+CGG | + | chr5_3:3206176-3206195 | None:intergenic | 30.0% | |
AAGAACATAATTAAGTGAGC+AGG | + | chr5_3:3206344-3206363 | None:intergenic | 30.0% | |
TCTTGAGCAAGGTAAAATTA+TGG | + | chr5_3:3206669-3206688 | None:intergenic | 30.0% | |
! | TCAACTTCCATTTCAGTTTT+TGG | - | chr5_3:3206797-3206816 | Msa0792100:CDS | 30.0% |
! | GATTTTGTTGCAGATATTGT+TGG | + | chr5_3:3207084-3207103 | None:intergenic | 30.0% |
GGAAGAAAAAAATAGACAGA+AGG | + | chr5_3:3207164-3207183 | None:intergenic | 30.0% | |
TTGAAGAACTTTGCAATTTG+AGG | + | chr5_3:3207477-3207496 | None:intergenic | 30.0% | |
!!! | TTTTAAGGTTACTTTCGGAA+TGG | - | chr5_3:3207712-3207731 | Msa0792100:intron | 30.0% |
! | TTTAAGGTTACTTTCGGAAT+GGG | - | chr5_3:3207713-3207732 | Msa0792100:intron | 30.0% |
ACTTGTGAAAAAATCCTTGT+AGG | + | chr5_3:3207934-3207953 | None:intergenic | 30.0% | |
!!! | ACTTAGTTTTTAGAGTAGTG+GGG | + | chr5_3:3207988-3208007 | None:intergenic | 30.0% |
!!! | GACTTAGTTTTTAGAGTAGT+GGG | + | chr5_3:3207989-3208008 | None:intergenic | 30.0% |
!!! | AGACTTAGTTTTTAGAGTAG+TGG | + | chr5_3:3207990-3208009 | None:intergenic | 30.0% |
TAACTATGATCTGTTGATCA+GGG | + | chr5_3:3208091-3208110 | None:intergenic | 30.0% | |
ATAACTATGATCTGTTGATC+AGG | + | chr5_3:3208092-3208111 | None:intergenic | 30.0% | |
ACATAAAGCTAACAAAGACA+TGG | + | chr5_3:3208157-3208176 | None:intergenic | 30.0% | |
GAAGTTAAAATTGACAAGTG+TGG | - | chr5_3:3208224-3208243 | Msa0792100:intron | 30.0% | |
! | CTTGACCATTAATGACTTTT+AGG | - | chr5_3:3208294-3208313 | Msa0792100:intron | 30.0% |
AAGCTCAAATAGAGAAAGTT+GGG | - | chr5_3:3208357-3208376 | Msa0792100:intron | 30.0% | |
!! | GTTAGGAGTAATTAGTCTTT+AGG | + | chr5_3:3208601-3208620 | None:intergenic | 30.0% |
CACTTAAGTAGGTTAATGAA+GGG | + | chr5_3:3208674-3208693 | None:intergenic | 30.0% | |
TCACTTAAGTAGGTTAATGA+AGG | + | chr5_3:3208675-3208694 | None:intergenic | 30.0% | |
GAATAGGTAATATTGACCAA+GGG | - | chr5_3:3208799-3208818 | Msa0792100:intron | 30.0% | |
AAGATGGTAAATTGACATCA+TGG | - | chr5_3:3208823-3208842 | Msa0792100:intron | 30.0% | |
TTGACATCATGGCTATAAAT+AGG | - | chr5_3:3208834-3208853 | Msa0792100:intron | 30.0% | |
ATCAGAGTTCACAAAATTTG+CGG | - | chr5_3:3208874-3208893 | Msa0792100:intron | 30.0% | |
ATTTGAGAAATGGTGATTTG+TGG | + | chr5_3:3208932-3208951 | None:intergenic | 30.0% | |
!! | ACTTGTTTGTGGTTTTACTA+CGG | + | chr5_3:3208978-3208997 | None:intergenic | 30.0% |
CTGAAAATTCTACTTGTTTG+TGG | + | chr5_3:3208989-3209008 | None:intergenic | 30.0% | |
TAAATAAGCTTCTTCACACT+TGG | + | chr5_3:3209026-3209045 | None:intergenic | 30.0% | |
AGAAGCTTATTTACTGAAGA+TGG | - | chr5_3:3209033-3209052 | Msa0792100:intron | 30.0% | |
ATAGAAGATGTAGAAATTGG+GGG | - | chr5_3:3209084-3209103 | Msa0792100:intron | 30.0% | |
! | ATTTGCCTGCTAGTTTATAT+AGG | - | chr5_3:3209322-3209341 | Msa0792100:five_prime_UTR | 30.0% |
! | TTTGCCTGCTAGTTTATATA+GGG | - | chr5_3:3209323-3209342 | Msa0792100:five_prime_UTR | 30.0% |
TAGCAATAAATACACATGAG+TGG | + | chr5_3:3209363-3209382 | None:intergenic | 30.0% | |
! | TTCTTCTTTTTACCCTTCTT+CGG | + | chr5_3:3209485-3209504 | None:intergenic | 30.0% |
GAAGAAGAAAAAAGCTGAAA+CGG | - | chr5_3:3209499-3209518 | Msa0792100:intron | 30.0% | |
AAAACACAAATTTCGTGTGT+AGG | - | chr5_3:3209689-3209708 | Msa0792100:five_prime_UTR | 30.0% | |
!! | AGCATGACTAACTCATTTTT+AGG | - | chr5_3:3209734-3209753 | Msa0792100:five_prime_UTR | 30.0% |
TAATGATAACAGCGAAATGA+AGG | + | chr5_3:3209787-3209806 | None:intergenic | 30.0% | |
! | GAACATGACTAACTCATTTT+AGG | - | chr5_3:3209815-3209834 | Msa0792100:five_prime_UTR | 30.0% |
TGGTGTTCTTGGAATTGAAT+TGG | - | chr5_3:3201665-3201684 | Msa0792100:three_prime_UTR | 35.0% | |
GACTTTAATCTTTCTTGGCT+TGG | + | chr5_3:3201903-3201922 | None:intergenic | 35.0% | |
GTAGTAGTTTCAGATCCAAA+TGG | + | chr5_3:3202054-3202073 | None:intergenic | 35.0% | |
AGTTGTGAAGAAAGAGAGAT+TGG | - | chr5_3:3202174-3202193 | Msa0792100:intron | 35.0% | |
GTATCTATCTTATAGCCACT+TGG | + | chr5_3:3202276-3202295 | None:intergenic | 35.0% | |
TAAGCTATATTGGAGGACTT+AGG | + | chr5_3:3202485-3202504 | None:intergenic | 35.0% | |
! | TGTGTTTTGTGTATGCTGTA+AGG | + | chr5_3:3202516-3202535 | None:intergenic | 35.0% |
TTCTTCACTAAGAGGTCAAT+AGG | - | chr5_3:3202656-3202675 | Msa0792100:intron | 35.0% | |
TCTTCACTAAGAGGTCAATA+GGG | - | chr5_3:3202657-3202676 | Msa0792100:intron | 35.0% | |
! | CATGGTTCTTTGAAGATTGT+TGG | + | chr5_3:3202816-3202835 | None:intergenic | 35.0% |
ACATGTTGAGACTTGAGAAA+TGG | + | chr5_3:3202939-3202958 | None:intergenic | 35.0% | |
TTATACTTTGCCACATACAC+AGG | - | chr5_3:3203000-3203019 | Msa0792100:intron | 35.0% | |
TATACTTTGCCACATACACA+GGG | - | chr5_3:3203001-3203020 | Msa0792100:intron | 35.0% | |
GTGATGTACCTTCCATATAT+AGG | + | chr5_3:3203152-3203171 | None:intergenic | 35.0% | |
GAGATAATGACTACACTTCA+AGG | + | chr5_3:3203252-3203271 | None:intergenic | 35.0% | |
GTATCTTCAGGAAAAGGAAA+AGG | + | chr5_3:3203275-3203294 | None:intergenic | 35.0% | |
!! | AGAGAAGTATCTTCAGGAAA+AGG | + | chr5_3:3203281-3203300 | None:intergenic | 35.0% |
CCATGGCAATATATAACACA+AGG | + | chr5_3:3203305-3203324 | None:intergenic | 35.0% | |
CCTTGTGTTATATATTGCCA+TGG | - | chr5_3:3203302-3203321 | Msa0792100:intron | 35.0% | |
TAATTCAGAACCAATAGCAG+TGG | + | chr5_3:3203353-3203372 | None:intergenic | 35.0% | |
ACTTGTGTTAAATGATGCAG+TGG | - | chr5_3:3203447-3203466 | Msa0792100:intron | 35.0% | |
TTAAATGATGCAGTGGATGT+AGG | - | chr5_3:3203454-3203473 | Msa0792100:intron | 35.0% | |
TAAATGATGCAGTGGATGTA+GGG | - | chr5_3:3203455-3203474 | Msa0792100:intron | 35.0% | |
!! | TGTTTTTACCCTTGACTTCT+CGG | - | chr5_3:3203524-3203543 | Msa0792100:intron | 35.0% |
!! | TGTTTTTACCCTTGTCTTCT+CGG | - | chr5_3:3203650-3203669 | Msa0792100:intron | 35.0% |
AAGTTACTTCAAGCCAACTA+AGG | + | chr5_3:3203712-3203731 | None:intergenic | 35.0% | |
TCTTGCACGTGAAATTGTAA+CGG | + | chr5_3:3203829-3203848 | None:intergenic | 35.0% | |
ATCATCTTTCTACCACACAA+AGG | + | chr5_3:3203877-3203896 | None:intergenic | 35.0% | |
GAAAGATGATCTGAAGATTG+TGG | - | chr5_3:3203887-3203906 | Msa0792100:intron | 35.0% | |
ATATCCCGTATAGGTTTATG+GGG | - | chr5_3:3203936-3203955 | Msa0792100:intron | 35.0% | |
AAAACTTATCCCACTAAGTG+GGG | + | chr5_3:3204098-3204117 | None:intergenic | 35.0% | |
CAAAACTTATCCCACTAAGT+GGG | + | chr5_3:3204099-3204118 | None:intergenic | 35.0% | |
GTATCTCACCAAGAAAAGAA+AGG | - | chr5_3:3204180-3204199 | Msa0792100:CDS | 35.0% | |
! | ATTGAGGTCCTTTCTTTTCT+TGG | + | chr5_3:3204191-3204210 | None:intergenic | 35.0% |
AAGAAAAGAAAGGACCTCAA+TGG | - | chr5_3:3204190-3204209 | Msa0792100:CDS | 35.0% | |
AGAAAAGAAAGGACCTCAAT+GGG | - | chr5_3:3204191-3204210 | Msa0792100:CDS | 35.0% | |
TATGTGAAAATCACCCATTG+AGG | + | chr5_3:3204207-3204226 | None:intergenic | 35.0% | |
! | TCCACTAAAGTTTTCTGTCA+AGG | - | chr5_3:3204242-3204261 | Msa0792100:intron | 35.0% |
! | CCACTAAAGTTTTCTGTCAA+GGG | - | chr5_3:3204243-3204262 | Msa0792100:intron | 35.0% |
ATACCATTCCAGCAATAGAA+GGG | + | chr5_3:3204591-3204610 | None:intergenic | 35.0% | |
AATACCATTCCAGCAATAGA+AGG | + | chr5_3:3204592-3204611 | None:intergenic | 35.0% | |
TTCTATTGCTGGAATGGTAT+TGG | - | chr5_3:3204591-3204610 | Msa0792100:intron | 35.0% | |
CATTCTTCATAAGTTGTTGC+TGG | - | chr5_3:3204841-3204860 | Msa0792100:intron | 35.0% | |
GTAAAGAAAAAGGAATCCCT+AGG | - | chr5_3:3204961-3204980 | Msa0792100:intron | 35.0% | |
ATGTATAATTAGGCCAAAGC+TGG | - | chr5_3:3205236-3205255 | Msa0792100:CDS | 35.0% | |
TGTATAATTAGGCCAAAGCT+GGG | - | chr5_3:3205237-3205256 | Msa0792100:CDS | 35.0% | |
CAATTCTAACTGACAGCTAT+AGG | + | chr5_3:3205583-3205602 | None:intergenic | 35.0% | |
! | TGTTGCATTTTCTCCCAATT+AGG | - | chr5_3:3205631-3205650 | Msa0792100:intron | 35.0% |
AAATGGCTGTACAATACATG+CGG | - | chr5_3:3205657-3205676 | Msa0792100:intron | 35.0% | |
ATGACGAATCTAACCACAAT+AGG | - | chr5_3:3205824-3205843 | Msa0792100:intron | 35.0% | |
!! | AACCACAATAGGCTTTATTC+AGG | - | chr5_3:3205835-3205854 | Msa0792100:intron | 35.0% |
AACCTGAATAAAGCCTATTG+TGG | + | chr5_3:3205840-3205859 | None:intergenic | 35.0% | |
CTTGCATGTCCAAATAAAAC+AGG | + | chr5_3:3205951-3205970 | None:intergenic | 35.0% | |
ATCATAAAAGAATTGTGGCC+GGG | + | chr5_3:3206175-3206194 | None:intergenic | 35.0% | |
GAGGACATTGTAGAAGAAAA+TGG | + | chr5_3:3206205-3206224 | None:intergenic | 35.0% | |
! | TTTTCAGCAATAGAGACTTG+AGG | + | chr5_3:3206234-3206253 | None:intergenic | 35.0% |
! | GATTTAGGGGATTTGAAACT+TGG | - | chr5_3:3206270-3206289 | Msa0792100:intron | 35.0% |
TGAATAACTAGTAGTGTGGA+GGG | + | chr5_3:3206407-3206426 | None:intergenic | 35.0% | |
! | AACTAAATTCTTTGAGGACC+AGG | + | chr5_3:3206530-3206549 | None:intergenic | 35.0% |
! | CATTTTGTTGATCTTGAGCA+AGG | + | chr5_3:3206680-3206699 | None:intergenic | 35.0% |
CTTGCTCAAGATCAACAAAA+TGG | - | chr5_3:3206678-3206697 | Msa0792100:intron | 35.0% | |
TGAAACCTCTAATCATGTCT+GGG | - | chr5_3:3206744-3206763 | Msa0792100:intron | 35.0% | |
GGTGCCTACATTATAAGTAA+TGG | + | chr5_3:3207211-3207230 | None:intergenic | 35.0% | |
GTAGTTTCATCTTCAAGCAA+GGG | + | chr5_3:3207232-3207251 | None:intergenic | 35.0% | |
TGTAGTTTCATCTTCAAGCA+AGG | + | chr5_3:3207233-3207252 | None:intergenic | 35.0% | |
GAAACTACAGATGACAATGA+TGG | - | chr5_3:3207244-3207263 | Msa0792100:intron | 35.0% | |
! | ACAGATGACAATGATGGAAT+TGG | - | chr5_3:3207250-3207269 | Msa0792100:intron | 35.0% |
GTGAAATTAAGAAATGGTCC+AGG | - | chr5_3:3207319-3207338 | Msa0792100:intron | 35.0% | |
!! | CACTTTAAAATCTACACGAG+AGG | - | chr5_3:3207386-3207405 | Msa0792100:intron | 35.0% |
ATGCTAGTAACACACTCTTA+TGG | - | chr5_3:3207410-3207429 | Msa0792100:intron | 35.0% | |
! | CACTCTTATGGACATTCTTT+TGG | - | chr5_3:3207422-3207441 | Msa0792100:intron | 35.0% |
! | AATACTAGCAAAGGTACAGT+AGG | + | chr5_3:3207623-3207642 | None:intergenic | 35.0% |
!! | TTGTTAGCTTTATGTAAGCC+TGG | - | chr5_3:3208162-3208181 | Msa0792100:CDS | 35.0% |
!!! | TGTCGTTGATGACATCATTT+TGG | - | chr5_3:3208198-3208217 | Msa0792100:CDS | 35.0% |
TAATGGTCAAGTTCAAGTGA+AGG | + | chr5_3:3208285-3208304 | None:intergenic | 35.0% | |
CTTGCCCTAAAAGTCATTAA+TGG | + | chr5_3:3208302-3208321 | None:intergenic | 35.0% | |
ATGAGCAACAATCTTCAATC+TGG | + | chr5_3:3208333-3208352 | None:intergenic | 35.0% | |
CAAGCTCAAATAGAGAAAGT+TGG | - | chr5_3:3208356-3208375 | Msa0792100:intron | 35.0% | |
AGCTCAAATAGAGAAAGTTG+GGG | - | chr5_3:3208358-3208377 | Msa0792100:intron | 35.0% | |
TTGAGTTTCTACAAAGGGTA+AGG | + | chr5_3:3208521-3208540 | None:intergenic | 35.0% | |
TTACCCTTTGTAGAAACTCA+AGG | - | chr5_3:3208520-3208539 | Msa0792100:intron | 35.0% | |
TCTCCTTGAGTTTCTACAAA+GGG | + | chr5_3:3208526-3208545 | None:intergenic | 35.0% | |
TTCTCCTTGAGTTTCTACAA+AGG | + | chr5_3:3208527-3208546 | None:intergenic | 35.0% | |
AACCTACTTAAGTGAGTTAG+AGG | - | chr5_3:3208680-3208699 | Msa0792100:intron | 35.0% | |
!! | GTTTTGGACCTAAATTTGGT+TGG | + | chr5_3:3208746-3208765 | None:intergenic | 35.0% |
GTCAATATTACCTATTCCCT+TGG | + | chr5_3:3208796-3208815 | None:intergenic | 35.0% | |
GGAATAGGTAATATTGACCA+AGG | - | chr5_3:3208798-3208817 | Msa0792100:intron | 35.0% | |
AATATTGACCAAGGGTAAGA+TGG | - | chr5_3:3208807-3208826 | Msa0792100:intron | 35.0% | |
TCAATTTACCATCTTACCCT+TGG | + | chr5_3:3208818-3208837 | None:intergenic | 35.0% | |
GCTATAAATAGGAGATAGCA+AGG | - | chr5_3:3208845-3208864 | Msa0792100:intron | 35.0% | |
TACTGAAGATGGAAGATCAA+CGG | - | chr5_3:3209044-3209063 | Msa0792100:intron | 35.0% | |
!! | TAACGCCTCATTTTTAGAGA+GGG | + | chr5_3:3209260-3209279 | None:intergenic | 35.0% |
!! | ATAACGCCTCATTTTTAGAG+AGG | + | chr5_3:3209261-3209280 | None:intergenic | 35.0% |
AGAACCCTATATAAACTAGC+AGG | + | chr5_3:3209330-3209349 | None:intergenic | 35.0% | |
TTCTCTTTCATACTTCGCAA+AGG | + | chr5_3:3209431-3209450 | None:intergenic | 35.0% | |
TTCTCAAATCTGTCACTCTT+TGG | + | chr5_3:3209536-3209555 | None:intergenic | 35.0% | |
!! | AGATGACTTGTTTCTTCGAT+GGG | + | chr5_3:3209609-3209628 | None:intergenic | 35.0% |
!! | AAGATGACTTGTTTCTTCGA+TGG | + | chr5_3:3209610-3209629 | None:intergenic | 35.0% |
!! | GCCAAATATTGGTTTCTGAT+TGG | - | chr5_3:3209761-3209780 | Msa0792100:five_prime_UTR | 35.0% |
GCCAATCAGAAACCAATATT+TGG | + | chr5_3:3209765-3209784 | None:intergenic | 35.0% | |
! | GAGAAGAAGTATGGTTAGAG+AGG | + | chr5_3:3201756-3201775 | None:intergenic | 40.0% |
CTTCTTCTCAGCTTATTTGG+TGG | - | chr5_3:3201767-3201786 | Msa0792100:three_prime_UTR | 40.0% | |
!! | ACTTTTAAGGGAACGCCATT+TGG | - | chr5_3:3202036-3202055 | Msa0792100:CDS | 40.0% |
ATTCATTTCATGACGCCAAG+TGG | - | chr5_3:3202258-3202277 | Msa0792100:intron | 40.0% | |
TACTGTGCTCAAACTGAACA+TGG | - | chr5_3:3202738-3202757 | Msa0792100:intron | 40.0% | |
GACTTGAGAAATGGATGTTG+AGG | + | chr5_3:3202930-3202949 | None:intergenic | 40.0% | |
! | TTTTCCCACAGATACTGATC+CGG | + | chr5_3:3203038-3203057 | None:intergenic | 40.0% |
GAAAAGGAATTCTCTCTTGC+TGG | - | chr5_3:3203053-3203072 | Msa0792100:CDS | 40.0% | |
GCAGTACATACGCAAACAAT+TGG | + | chr5_3:3203179-3203198 | None:intergenic | 40.0% | |
!! | CAAGGAAGAGAAGTATCTTC+AGG | + | chr5_3:3203287-3203306 | None:intergenic | 40.0% |
GTAACACATACCTGTTTCCA+TGG | + | chr5_3:3203322-3203341 | None:intergenic | 40.0% | |
! | ACTTTTATGGCCACTGCTAT+TGG | - | chr5_3:3203340-3203359 | Msa0792100:intron | 40.0% |
! | GTTTTTACCCTTGACTTCTC+GGG | - | chr5_3:3203525-3203544 | Msa0792100:intron | 40.0% |
! | TTTTTACCCTTGACTTCTCG+GGG | - | chr5_3:3203526-3203545 | Msa0792100:intron | 40.0% |
! | GTTTTTACCCTTGTCTTCTC+GGG | - | chr5_3:3203651-3203670 | Msa0792100:intron | 40.0% |
! | TTTTTACCCTTGTCTTCTCG+GGG | - | chr5_3:3203652-3203671 | Msa0792100:intron | 40.0% |
CACACAAAGGAATGGTCAAA+AGG | + | chr5_3:3203864-3203883 | None:intergenic | 40.0% | |
! | CTTTTGACCATTCCTTTGTG+TGG | - | chr5_3:3203862-3203881 | Msa0792100:intron | 40.0% |
CTTTCTACCACACAAAGGAA+TGG | + | chr5_3:3203872-3203891 | None:intergenic | 40.0% | |
TATCCCGTATAGGTTTATGG+GGG | - | chr5_3:3203937-3203956 | Msa0792100:intron | 40.0% | |
CCAAAACTTATCCCACTAAG+TGG | + | chr5_3:3204100-3204119 | None:intergenic | 40.0% | |
! | CCACTTAGTGGGATAAGTTT+TGG | - | chr5_3:3204097-3204116 | Msa0792100:intron | 40.0% |
!! | CTTAGTGGGATAAGTTTTGG+TGG | - | chr5_3:3204100-3204119 | Msa0792100:intron | 40.0% |
CCCTTGACAGAAAACTTTAG+TGG | + | chr5_3:3204246-3204265 | None:intergenic | 40.0% | |
TTTCTCTCCATGCATCTTTG+TGG | - | chr5_3:3204281-3204300 | Msa0792100:intron | 40.0% | |
! | GTTTTGTCCACAAAGATGCA+TGG | + | chr5_3:3204291-3204310 | None:intergenic | 40.0% |
CTTTGTGGACAAAACTGTTG+AGG | - | chr5_3:3204296-3204315 | Msa0792100:intron | 40.0% | |
! | GTGGGATTTAGCCTTCTTTA+TGG | - | chr5_3:3204556-3204575 | Msa0792100:intron | 40.0% |
! | TAATCTCATGATGGAGCTTG+TGG | - | chr5_3:3204636-3204655 | Msa0792100:intron | 40.0% |
TAAAGGGAGTTGGCAATACT+TGG | + | chr5_3:3204744-3204763 | None:intergenic | 40.0% | |
CATAAGTTGTTGCTGGAATC+TGG | - | chr5_3:3204848-3204867 | Msa0792100:intron | 40.0% | |
! | TATTCTAGCCTCTAGCTTGT+AGG | - | chr5_3:3204883-3204902 | Msa0792100:intron | 40.0% |
!! | TGTTTTTAAGGGGTTGTCAC+AGG | - | chr5_3:3205153-3205172 | Msa0792100:intron | 40.0% |
GTAGTTGAAATTCCCAGCTT+TGG | + | chr5_3:3205252-3205271 | None:intergenic | 40.0% | |
!!! | CTGGTTACTTTTGAGCAACA+TGG | - | chr5_3:3205536-3205555 | Msa0792100:intron | 40.0% |
TCTCATCTCAGAATCCTATG+CGG | - | chr5_3:3206004-3206023 | Msa0792100:intron | 40.0% | |
GTTAAATACCTCATCCACAC+CGG | + | chr5_3:3206298-3206317 | None:intergenic | 40.0% | |
CTGAATAACTAGTAGTGTGG+AGG | + | chr5_3:3206408-3206427 | None:intergenic | 40.0% | |
GCACTGAATAACTAGTAGTG+TGG | + | chr5_3:3206411-3206430 | None:intergenic | 40.0% | |
TAGAGGTTTCAGGCAAGTTA+AGG | + | chr5_3:3206735-3206754 | None:intergenic | 40.0% | |
CAGACATGATTAGAGGTTTC+AGG | + | chr5_3:3206745-3206764 | None:intergenic | 40.0% | |
CTGAAACCTCTAATCATGTC+TGG | - | chr5_3:3206743-3206762 | Msa0792100:intron | 40.0% | |
GAAACCTCTAATCATGTCTG+GGG | - | chr5_3:3206745-3206764 | Msa0792100:intron | 40.0% | |
AAAGATAACCTGCACACTTG+CGG | + | chr5_3:3207287-3207306 | None:intergenic | 40.0% | |
TCAATGTGTAGGAGGAATGT+TGG | + | chr5_3:3207572-3207591 | None:intergenic | 40.0% | |
CATTCCTCCTACACATTGAA+CGG | - | chr5_3:3207573-3207592 | Msa0792100:intron | 40.0% | |
!! | AAAAGCACCGTTCAATGTGT+AGG | + | chr5_3:3207583-3207602 | None:intergenic | 40.0% |
GATAGACAAAGTTCGAAGAG+TGG | - | chr5_3:3207755-3207774 | Msa0792100:intron | 40.0% | |
AACAATTATGTGCGCCTACA+AGG | - | chr5_3:3207917-3207936 | Msa0792100:CDS | 40.0% | |
ATCAACGACATAAGAAAGCC+AGG | + | chr5_3:3208188-3208207 | None:intergenic | 40.0% | |
!!! | GACTTTTAGGGCAAGCTAAA+TGG | - | chr5_3:3208307-3208326 | Msa0792100:intron | 40.0% |
AGGTGAAGATTGGGAAAATG+TGG | + | chr5_3:3208501-3208520 | None:intergenic | 40.0% | |
CAAAGGGTAAGGTGAAGATT+GGG | + | chr5_3:3208510-3208529 | None:intergenic | 40.0% | |
ACAAAGGGTAAGGTGAAGAT+TGG | + | chr5_3:3208511-3208530 | None:intergenic | 40.0% | |
CTCCTCTAACTCACTTAAGT+AGG | + | chr5_3:3208685-3208704 | None:intergenic | 40.0% | |
AAGCAAGGCCAACCAAATTT+AGG | - | chr5_3:3208735-3208754 | Msa0792100:intron | 40.0% | |
AAAAAGGACACCAAGGGAAT+AGG | - | chr5_3:3208783-3208802 | Msa0792100:intron | 40.0% | |
AAGCTTCTTCACACTTGGAA+TGG | + | chr5_3:3209021-3209040 | None:intergenic | 40.0% | |
AGATGTAGAAATTGGGGGAA+AGG | - | chr5_3:3209089-3209108 | Msa0792100:intron | 40.0% | |
! | AAGCTCCCTCTCTAAAAATG+AGG | - | chr5_3:3209252-3209271 | Msa0792100:five_prime_UTR | 40.0% |
GTCATGTCAGAATACTGTGA+AGG | - | chr5_3:3209394-3209413 | Msa0792100:intron | 40.0% | |
AGATGAAAAGAAGCCGAAGA+AGG | - | chr5_3:3209469-3209488 | Msa0792100:intron | 40.0% | |
GATGAAAAGAAGCCGAAGAA+GGG | - | chr5_3:3209470-3209489 | Msa0792100:intron | 40.0% | |
! | TTGCGGCTTTGTCTTCTTAA+GGG | - | chr5_3:3209578-3209597 | Msa0792100:intron | 40.0% |
! | CTTCTCAGCTTATTTGGTGG+TGG | - | chr5_3:3201770-3201789 | Msa0792100:three_prime_UTR | 45.0% |
TGGTAGCTTAGCTCAGACTT+TGG | - | chr5_3:3201793-3201812 | Msa0792100:three_prime_UTR | 45.0% | |
GGCTTGGGAACAGACAAAAA+AGG | + | chr5_3:3201887-3201906 | None:intergenic | 45.0% | |
ATAACCCGGATCAGTATCTG+TGG | - | chr5_3:3203030-3203049 | Msa0792100:CDS | 45.0% | |
TAACCCGGATCAGTATCTGT+GGG | - | chr5_3:3203031-3203050 | Msa0792100:CDS | 45.0% | |
TTTCCCACAGATACTGATCC+GGG | + | chr5_3:3203037-3203056 | None:intergenic | 45.0% | |
GGATCAGTATCTGTGGGAAA+AGG | - | chr5_3:3203037-3203056 | Msa0792100:CDS | 45.0% | |
TTGCTGGTAGAACCTACCAA+AGG | - | chr5_3:3203069-3203088 | Msa0792100:CDS | 45.0% | |
CTCTAAATCCTGCCTTTGGT+AGG | + | chr5_3:3203084-3203103 | None:intergenic | 45.0% | |
CTACCAAAGGCAGGATTTAG+AGG | - | chr5_3:3203082-3203101 | Msa0792100:CDS | 45.0% | |
TTGCCTCTAAATCCTGCCTT+TGG | + | chr5_3:3203088-3203107 | None:intergenic | 45.0% | |
ACACTTCAAGGTATAGCCTC+TGG | + | chr5_3:3203240-3203259 | None:intergenic | 45.0% | |
GAGAATTACAGCCGCTTCAT+TGG | + | chr5_3:3203487-3203506 | None:intergenic | 45.0% | |
AACTTACTTCGTGCCAACCA+AGG | + | chr5_3:3203581-3203600 | None:intergenic | 45.0% | |
!! | AGATTGTGGTGTCGCATTTG+AGG | - | chr5_3:3203901-3203920 | Msa0792100:intron | 45.0% |
ACCTCCCCCATAAACCTATA+CGG | + | chr5_3:3203944-3203963 | None:intergenic | 45.0% | |
TCCAGCAATAGAAGGGTCTT+CGG | + | chr5_3:3204584-3204603 | None:intergenic | 45.0% | |
AGACCCTTCTATTGCTGGAA+TGG | - | chr5_3:3204585-3204604 | Msa0792100:intron | 45.0% | |
AATCCGGCTTCCAAAGTTCA+CGG | - | chr5_3:3204669-3204688 | Msa0792100:intron | 45.0% | |
!! | AGAGAGAGTACCGTGAACTT+TGG | + | chr5_3:3204682-3204701 | None:intergenic | 45.0% |
CAATACTTGGCATCCACACA+GGG | + | chr5_3:3204731-3204750 | None:intergenic | 45.0% | |
TTCAGCTCGACTGTCCAAAT+TGG | - | chr5_3:3205356-3205375 | Msa0792100:intron | 45.0% | |
GAGATGAGATCAGAGTGATG+CGG | + | chr5_3:3205993-3206012 | None:intergenic | 45.0% | |
ATAAAAGAATTGTGGCCGGG+AGG | + | chr5_3:3206172-3206191 | None:intergenic | 45.0% | |
CAATAGAGACTTGAGGAGGA+CGG | + | chr5_3:3206227-3206246 | None:intergenic | 45.0% | |
TCAGCAATAGAGACTTGAGG+AGG | + | chr5_3:3206231-3206250 | None:intergenic | 45.0% | |
! | GGGGATTTGAAACTTGGTTC+CGG | - | chr5_3:3206276-3206295 | Msa0792100:intron | 45.0% |
! | TTTGAAACTTGGTTCCGGTG+TGG | - | chr5_3:3206281-3206300 | Msa0792100:intron | 45.0% |
GTTTCAGGCAAGTTAAGGCT+AGG | + | chr5_3:3206730-3206749 | None:intergenic | 45.0% | |
ACGAGATTCTCTCTAGTCTG+CGG | - | chr5_3:3207019-3207038 | Msa0792100:intron | 45.0% | |
AAAGTTCGAAGAGTGGCTAG+TGG | - | chr5_3:3207762-3207781 | Msa0792100:intron | 45.0% | |
CAAATAGAGAAAGTTGGGGC+AGG | - | chr5_3:3208362-3208381 | Msa0792100:CDS | 45.0% | |
TGCTGATGATAAGCTCTCTC+AGG | - | chr5_3:3208432-3208451 | Msa0792100:intron | 45.0% | |
! | ATGGTGATTTGTGGCGTGAA+GGG | + | chr5_3:3208923-3208942 | None:intergenic | 45.0% |
! | AATGGTGATTTGTGGCGTGA+AGG | + | chr5_3:3208924-3208943 | None:intergenic | 45.0% |
TGAAGATGGAAGATCAACGG+AGG | - | chr5_3:3209047-3209066 | Msa0792100:intron | 45.0% | |
ATGGAAGATCAACGGAGGTT+AGG | - | chr5_3:3209052-3209071 | Msa0792100:intron | 45.0% | |
TGGAAGATCAACGGAGGTTA+GGG | - | chr5_3:3209053-3209072 | Msa0792100:intron | 45.0% | |
GAGTGACAGATTTGAGAAGC+TGG | - | chr5_3:3209538-3209557 | Msa0792100:intron | 45.0% | |
TGACAGATTTGAGAAGCTGG+AGG | - | chr5_3:3209541-3209560 | Msa0792100:intron | 45.0% | |
! | CTTGCGGCTTTGTCTTCTTA+AGG | - | chr5_3:3209577-3209596 | Msa0792100:intron | 45.0% |
!!! | TTTTTAATCATTTTATAAAT+CGG | - | chr5_3:3204345-3204364 | Msa0792100:CDS | 5.0% |
!!! | ATAAAGATTTTTTTTTTTTT+TGG | - | chr5_3:3205280-3205299 | Msa0792100:CDS | 5.0% |
!!! | TAAAGATTTTTTTTTTTTTT+GGG | - | chr5_3:3205281-3205300 | Msa0792100:CDS | 5.0% |
AGAGGGAAAGAAAGGACAGC+TGG | - | chr5_3:3201632-3201651 | Msa0792100:three_prime_UTR | 50.0% | |
AAAGAAAGGACAGCTGGCTG+AGG | - | chr5_3:3201638-3201657 | Msa0792100:three_prime_UTR | 50.0% | |
!! | GCTGAGGTGTTTGGTGTTCT+TGG | - | chr5_3:3201654-3201673 | Msa0792100:three_prime_UTR | 50.0% |
!! | CTCAGCTTATTTGGTGGTGG+TGG | - | chr5_3:3201773-3201792 | Msa0792100:three_prime_UTR | 50.0% |
ATTTCGTTATTCGCCCTCCC+AGG | - | chr5_3:3202318-3202337 | Msa0792100:intron | 50.0% | |
ACTTTGCCACATACACAGGG+CGG | - | chr5_3:3203004-3203023 | Msa0792100:intron | 50.0% | |
TATAGTCCGCCCTGTGTATG+TGG | + | chr5_3:3203013-3203032 | None:intergenic | 50.0% | |
TGGTAGAACCTACCAAAGGC+AGG | - | chr5_3:3203073-3203092 | Msa0792100:CDS | 50.0% | |
TAGGGCAGATGCCAATGAAG+CGG | - | chr5_3:3203473-3203492 | Msa0792100:intron | 50.0% | |
GATGGAGACTATGTCAGCCT+TGG | - | chr5_3:3203561-3203580 | Msa0792100:intron | 50.0% | |
GAGACTATGTCAGCCTTGGT+TGG | - | chr5_3:3203565-3203584 | Msa0792100:intron | 50.0% | |
CCTCCCCCATAAACCTATAC+GGG | + | chr5_3:3203943-3203962 | None:intergenic | 50.0% | |
AGGTTTATGGGGGAGGTCAA+TGG | - | chr5_3:3203947-3203966 | Msa0792100:intron | 50.0% | |
GGTTTATGGGGGAGGTCAAT+GGG | - | chr5_3:3203948-3203967 | Msa0792100:intron | 50.0% | |
ATGCAACCAACCCCACTTAG+TGG | - | chr5_3:3204085-3204104 | Msa0792100:intron | 50.0% | |
TGCAACCAACCCCACTTAGT+GGG | - | chr5_3:3204086-3204105 | Msa0792100:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+TGG | + | chr5_3:3204094-3204113 | None:intergenic | 50.0% | |
GGTCTTCGGCTCCATAAAGA+AGG | + | chr5_3:3204570-3204589 | None:intergenic | 50.0% | |
! | GTACCGTGAACTTTGGAAGC+CGG | + | chr5_3:3204675-3204694 | None:intergenic | 50.0% |
GCAATACTTGGCATCCACAC+AGG | + | chr5_3:3204732-3204751 | None:intergenic | 50.0% | |
! | AGCCTCTAGCTTGTAGGACT+TGG | - | chr5_3:3204889-3204908 | Msa0792100:intron | 50.0% |
CACCAAGTCCTACAAGCTAG+AGG | + | chr5_3:3204894-3204913 | None:intergenic | 50.0% | |
TGGCTGTACAATACATGCGG+CGG | - | chr5_3:3205660-3205679 | Msa0792100:intron | 50.0% | |
ATGGCGACCATAATTCCTCC+CGG | - | chr5_3:3206154-3206173 | Msa0792100:intron | 50.0% | |
ATTGTGGCCGGGAGGAATTA+TGG | + | chr5_3:3206164-3206183 | None:intergenic | 50.0% | |
AGCTGCACTTATGAGAAGCC+TGG | - | chr5_3:3206509-3206528 | Msa0792100:intron | 50.0% | |
ACCTCTAATCATGTCTGGGG+CGG | - | chr5_3:3206748-3206767 | Msa0792100:intron | 50.0% | |
CTCCCCTGACTGATGTAGTA+GGG | - | chr5_3:3207130-3207149 | Msa0792100:intron | 50.0% | |
CACCCTACTACATCAGTCAG+GGG | + | chr5_3:3207135-3207154 | None:intergenic | 50.0% | |
GCACCCTACTACATCAGTCA+GGG | + | chr5_3:3207136-3207155 | None:intergenic | 50.0% | |
AGCACCGTTCAATGTGTAGG+AGG | + | chr5_3:3207580-3207599 | None:intergenic | 50.0% | |
! | AGCTTTATGTAAGCCTGGCC+TGG | - | chr5_3:3208167-3208186 | Msa0792100:CDS | 50.0% |
TGGGGCAGGTGTTCTTCATT+AGG | - | chr5_3:3208376-3208395 | Msa0792100:CDS | 50.0% | |
GGCAGGTGTTCTTCATTAGG+AGG | - | chr5_3:3208379-3208398 | Msa0792100:CDS | 50.0% | |
! | TGGTGATTTGTGGCGTGAAG+GGG | + | chr5_3:3208922-3208941 | None:intergenic | 50.0% |
!! | ACACAGGGCGGACTATAACC+CGG | - | chr5_3:3203016-3203035 | Msa0792100:CDS | 55.0% |
GTGCAGCTCAAGAATGCCAG+AGG | - | chr5_3:3203221-3203240 | Msa0792100:intron | 55.0% | |
TCGGGGTCAGGCTTATCTGA+TGG | - | chr5_3:3203543-3203562 | Msa0792100:intron | 55.0% | |
TCGGGGTCAGGCTTATCTGA+TGG | - | chr5_3:3203543-3203562 | Msa0792100:intron | 55.0% | |
CCCGTATAGGTTTATGGGGG+AGG | - | chr5_3:3203940-3203959 | Msa0792100:intron | 55.0% | |
GGTCAATGGGCGCAGTTACT+AGG | - | chr5_3:3203961-3203980 | Msa0792100:intron | 55.0% | |
GCCGAAGACCCTTCTATTGC+TGG | - | chr5_3:3204580-3204599 | Msa0792100:intron | 55.0% | |
TCTGTGCGTGTATCCCTGTG+TGG | - | chr5_3:3204715-3204734 | Msa0792100:intron | 55.0% | |
GGCTGTACAATACATGCGGC+GGG | - | chr5_3:3205661-3205680 | Msa0792100:intron | 55.0% | |
!! | GCGGCGGGTTATTGAGAAGA+AGG | - | chr5_3:3205676-3205695 | Msa0792100:intron | 55.0% |
TAGAGACTTGAGGAGGACGG+AGG | + | chr5_3:3206224-3206243 | None:intergenic | 55.0% | |
ACTTGGTTCCGGTGTGGATG+AGG | - | chr5_3:3206287-3206306 | Msa0792100:intron | 55.0% | |
TCCGCCCCAGACATGATTAG+AGG | + | chr5_3:3206752-3206771 | None:intergenic | 55.0% | |
GCTCCCCTGACTGATGTAGT+AGG | - | chr5_3:3207129-3207148 | Msa0792100:intron | 55.0% | |
GGCACCCTACTACATCAGTC+AGG | + | chr5_3:3207137-3207156 | None:intergenic | 55.0% | |
GCACACTTGCGGCTTCATCA+GGG | + | chr5_3:3207276-3207295 | None:intergenic | 55.0% | |
TGCACACTTGCGGCTTCATC+AGG | + | chr5_3:3207277-3207296 | None:intergenic | 55.0% | |
TGATGAAGCCGCAAGTGTGC+AGG | - | chr5_3:3207276-3207295 | Msa0792100:intron | 55.0% | |
CGACATAAGAAAGCCAGGCC+AGG | + | chr5_3:3208183-3208202 | None:intergenic | 55.0% | |
GCGTGAAGGGGTGAAGTTTG+TGG | + | chr5_3:3208910-3208929 | None:intergenic | 55.0% | |
! | GGACAGCTGGCTGAGGTGTT+TGG | - | chr5_3:3201645-3201664 | Msa0792100:three_prime_UTR | 60.0% |
ACCCTTGACTTCTCGGGGTC+AGG | - | chr5_3:3203531-3203550 | Msa0792100:intron | 60.0% | |
GCCTGACCCCGAGAAGTCAA+GGG | + | chr5_3:3203535-3203554 | None:intergenic | 60.0% | |
AGCCTGACCCCGAGAAGTCA+AGG | + | chr5_3:3203536-3203555 | None:intergenic | 60.0% | |
ACCCTTGTCTTCTCGGGGTC+AGG | - | chr5_3:3203657-3203676 | Msa0792100:intron | 60.0% | |
GCCTGACCCCGAGAAGACAA+GGG | + | chr5_3:3203661-3203680 | None:intergenic | 60.0% | |
AGCCTGACCCCGAGAAGACA+AGG | + | chr5_3:3203662-3203681 | None:intergenic | 60.0% | |
AGGCTCTCAGCAGACGCTTG+CGG | - | chr5_3:3209561-3209580 | Msa0792100:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 3201604 | 3209861 | 3201604 | ID=Msa0792100;Name=Msa0792100 |
chr5_3 | mRNA | 3201604 | 3209861 | 3201604 | ID=Msa0792100-mRNA-1;Parent=Msa0792100;Name=Msa0792100-mRNA-1;_AED=0.20;_eAED=0.20;_QI=428|0.92|0.92|1|0.92|0.92|14|230|501 |
chr5_3 | exon | 3201604 | 3202061 | 3201604 | ID=Msa0792100-mRNA-1:exon:1444;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3203012 | 3203149 | 3203012 | ID=Msa0792100-mRNA-1:exon:1443;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3204168 | 3204239 | 3204168 | ID=Msa0792100-mRNA-1:exon:1442;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3204322 | 3204456 | 3204322 | ID=Msa0792100-mRNA-1:exon:1441;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3205157 | 3205336 | 3205157 | ID=Msa0792100-mRNA-1:exon:1440;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3205440 | 3205538 | 3205440 | ID=Msa0792100-mRNA-1:exon:1439;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3205732 | 3205812 | 3205732 | ID=Msa0792100-mRNA-1:exon:1438;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3206775 | 3206898 | 3206775 | ID=Msa0792100-mRNA-1:exon:1437;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3207483 | 3207577 | 3207483 | ID=Msa0792100-mRNA-1:exon:1436;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3207872 | 3207998 | 3207872 | ID=Msa0792100-mRNA-1:exon:1435;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3208135 | 3208238 | 3208135 | ID=Msa0792100-mRNA-1:exon:1434;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3208362 | 3208443 | 3208362 | ID=Msa0792100-mRNA-1:exon:1433;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3209126 | 3209354 | 3209126 | ID=Msa0792100-mRNA-1:exon:1432;Parent=Msa0792100-mRNA-1 |
chr5_3 | exon | 3209622 | 3209861 | 3209622 | ID=Msa0792100-mRNA-1:exon:1431;Parent=Msa0792100-mRNA-1 |
chr5_3 | five_prime_UTR | 3209622 | 3209861 | 3209622 | ID=Msa0792100-mRNA-1:five_prime_utr;Parent=Msa0792100-mRNA-1 |
chr5_3 | five_prime_UTR | 3209167 | 3209354 | 3209167 | ID=Msa0792100-mRNA-1:five_prime_utr;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3209126 | 3209166 | 3209126 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3208362 | 3208443 | 3208362 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3208135 | 3208238 | 3208135 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3207872 | 3207998 | 3207872 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3207483 | 3207577 | 3207483 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3206775 | 3206898 | 3206775 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3205732 | 3205812 | 3205732 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3205440 | 3205538 | 3205440 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3205157 | 3205336 | 3205157 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3204322 | 3204456 | 3204322 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3204168 | 3204239 | 3204168 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3203012 | 3203149 | 3203012 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | CDS | 3201834 | 3202061 | 3201834 | ID=Msa0792100-mRNA-1:cds;Parent=Msa0792100-mRNA-1 |
chr5_3 | three_prime_UTR | 3201604 | 3201833 | 3201604 | ID=Msa0792100-mRNA-1:three_prime_utr;Parent=Msa0792100-mRNA-1 |
Gene Sequence |
Protein sequence |