Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270740 | XP_003593057.1 | 95.471 | 817 | 28 | 1 | 1 | 817 | 1 | 808 | 0.0 | 1610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270740 | G7IJX0 | 95.471 | 817 | 28 | 1 | 1 | 817 | 1 | 808 | 0.0 | 1610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0189160 | Msa0270740 | 0.883282 | 5.117960e-71 | -8.615850e-47 |
| Msa0270740 | Msa0309480 | 0.975087 | 2.588367e-139 | -8.615850e-47 |
| Msa0270740 | Msa0516160 | 0.809003 | 2.344904e-50 | -8.615850e-47 |
| Msa0270740 | Msa1452760 | 0.858707 | 6.849965e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270740 | MtrunA17_Chr2g0278061 | 95.471 | 817 | 28 | 1 | 1 | 817 | 1 | 808 | 0.0 | 1610 |
| Msa0270740 | MtrunA17_Chr6g0484301 | 33.281 | 634 | 366 | 16 | 162 | 782 | 92 | 681 | 3.17e-83 | 280 |
| Msa0270740 | MtrunA17_Chr1g0212431 | 28.670 | 722 | 450 | 14 | 106 | 793 | 43 | 733 | 6.00e-79 | 270 |
| Msa0270740 | MtrunA17_Chr7g0253851 | 25.339 | 663 | 412 | 17 | 162 | 785 | 46 | 664 | 3.33e-44 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270740 | AT1G71240.2 | 58.875 | 800 | 308 | 7 | 21 | 810 | 35 | 823 | 0.0 | 935 |
| Msa0270740 | AT1G71240.1 | 58.801 | 801 | 308 | 8 | 21 | 810 | 35 | 824 | 0.0 | 930 |
| Msa0270740 | AT1G71240.3 | 57.853 | 624 | 242 | 7 | 21 | 634 | 35 | 647 | 0.0 | 711 |
| Msa0270740 | AT3G18350.3 | 30.861 | 674 | 414 | 16 | 124 | 785 | 49 | 682 | 2.03e-83 | 281 |
| Msa0270740 | AT3G18350.1 | 30.861 | 674 | 414 | 16 | 124 | 785 | 49 | 682 | 2.03e-83 | 281 |
| Msa0270740 | AT3G18350.2 | 30.861 | 674 | 414 | 16 | 124 | 785 | 49 | 682 | 2.03e-83 | 281 |
| Msa0270740 | AT1G48840.1 | 29.762 | 672 | 417 | 12 | 124 | 782 | 49 | 678 | 3.77e-78 | 267 |
| Msa0270740 | AT5G23390.1 | 29.046 | 723 | 421 | 17 | 120 | 795 | 53 | 730 | 8.58e-73 | 253 |
| Msa0270740 | AT2G21720.1 | 24.545 | 660 | 423 | 14 | 162 | 784 | 107 | 728 | 7.81e-48 | 182 |
| Msa0270740 | AT2G21720.2 | 24.434 | 663 | 423 | 14 | 162 | 784 | 107 | 731 | 1.88e-47 | 181 |
Find 168 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTGACTGTTGGGTTTCT+TGG | 0.043925 | 2_3:+1995459 | Msa0270740:CDS |
| AGGGGTATTATTGATTATTT+AGG | 0.148836 | 2_3:+1996690 | Msa0270740:three_prime_UTR |
| TTACCCTTGCTTTGGTTTCC+TGG | 0.185007 | 2_3:-1996409 | None:intergenic |
| AAGGCAAAAGTTGGGCCTTT+AGG | 0.222763 | 2_3:+1994244 | Msa0270740:CDS |
| TCAATACATTCAATCTTTCT+TGG | 0.227087 | 2_3:-1992007 | None:intergenic |
| TTCTAGGGAGCTGGCTTATT+GGG | 0.234930 | 2_3:+1994169 | Msa0270740:intron |
| AACTTTAGCTGTTAACTATT+GGG | 0.250174 | 2_3:+1994864 | Msa0270740:CDS |
| TCTGCTGTTTCTATTTCTTC+TGG | 0.255306 | 2_3:+1994283 | Msa0270740:CDS |
| TGCAGAGAAGGCTTCTTTAC+AGG | 0.257249 | 2_3:+1993191 | Msa0270740:CDS |
| AAACTTTAGCTGTTAACTAT+TGG | 0.257963 | 2_3:+1994863 | Msa0270740:CDS |
| GTTCTAGGGAGCTGGCTTAT+TGG | 0.295279 | 2_3:+1994168 | Msa0270740:intron |
| CACAAGTTCACGCATGAGTA+TGG | 0.303668 | 2_3:+1994655 | Msa0270740:CDS |
| ATATAGTGATGCTCGTAATT+TGG | 0.314944 | 2_3:+1992790 | Msa0270740:CDS |
| AGGCAAAAGTTGGGCCTTTA+GGG | 0.316742 | 2_3:+1994245 | Msa0270740:CDS |
| GAGTCTAGCAATACCATTAA+TGG | 0.319435 | 2_3:-1994743 | None:intergenic |
| GCAACGAGCAGTGCCATTAA+TGG | 0.329071 | 2_3:+1994730 | Msa0270740:CDS |
| AATAGTTAACAGCTAAAGTT+TGG | 0.330311 | 2_3:-1994861 | None:intergenic |
| GGGGTATTATTGATTATTTA+GGG | 0.335828 | 2_3:+1996691 | Msa0270740:three_prime_UTR |
| GTGAGATGAGGAGGGATGTT+TGG | 0.340477 | 2_3:+1994602 | Msa0270740:CDS |
| GCATCACTATATACAGCTTC+TGG | 0.341679 | 2_3:-1992779 | None:intergenic |
| GTGTATAGAGATAGAGATTT+AGG | 0.344155 | 2_3:-1990400 | None:intergenic |
| CATTCATACTTAGGTCGAAT+TGG | 0.347539 | 2_3:+1994551 | Msa0270740:intron |
| TGGGGAAGTCAACTGGTTAC+AGG | 0.349503 | 2_3:+1994883 | Msa0270740:CDS |
| GTAGAGTACGTCGAGAAAAT+AGG | 0.356259 | 2_3:+1993811 | Msa0270740:intron |
| AGAAGCCTTCTCTGCATTGC+TGG | 0.368515 | 2_3:-1993184 | None:intergenic |
| AACAAGCAAACAAAAGTATC+AGG | 0.371038 | 2_3:+1995137 | Msa0270740:CDS |
| TTGCGAGCCTCGAAAACATT+AGG | 0.375872 | 2_3:-1994694 | None:intergenic |
| ATCCGGACTTACCCTTGCTT+TGG | 0.379147 | 2_3:-1996417 | None:intergenic |
| TTTGTTCTCAAGTTCCTTCA+AGG | 0.390824 | 2_3:-1996377 | None:intergenic |
| TCTGAAGTGGGAGAATAATA+TGG | 0.392011 | 2_3:+1993911 | Msa0270740:CDS |
| GTGGATGAAATCTCCATCTT+GGG | 0.392487 | 2_3:+1995008 | Msa0270740:CDS |
| GGTGCTGGAATTTATTGACT+TGG | 0.398798 | 2_3:+1994576 | Msa0270740:CDS |
| AGGAGCCACACCTGACTGTT+GGG | 0.401607 | 2_3:+1995451 | Msa0270740:CDS |
| CTGCTCTTTCAGTGAGCGTT+AGG | 0.402602 | 2_3:-1995110 | None:intergenic |
| TCTGTAAGCAACCCTGAAAA+TGG | 0.404792 | 2_3:-1996447 | None:intergenic |
| TATTCATAACAATGCTTGCC+TGG | 0.405685 | 2_3:+1993136 | Msa0270740:CDS |
| TTAAGGAGCAAGGCCGCCTT+GGG | 0.405878 | 2_3:+1995839 | Msa0270740:CDS |
| AGATTGGATCTTACATATGA+TGG | 0.406083 | 2_3:+1994208 | Msa0270740:CDS |
| CTTAAGGAGCAAGGCCGCCT+TGG | 0.406837 | 2_3:+1995838 | Msa0270740:CDS |
| CAAGGCGGCCTTGCTCCTTA+AGG | 0.408441 | 2_3:-1995837 | None:intergenic |
| CTGTTGGAATGCTGACAATC+AGG | 0.413827 | 2_3:+1995812 | Msa0270740:CDS |
| TAGATCAGAAGTTTCCTTGA+AGG | 0.419759 | 2_3:+1996363 | Msa0270740:CDS |
| TTATTCTCCCACTTCAGAAC+AGG | 0.421954 | 2_3:-1993906 | None:intergenic |
| TTGCTGTGCTGATGTTAACT+TGG | 0.422067 | 2_3:+1996158 | Msa0270740:CDS |
| TAACTATTGGGGAAGTCAAC+TGG | 0.425585 | 2_3:+1994876 | Msa0270740:CDS |
| TTTCTGATGTTCTAGGGAGC+TGG | 0.434072 | 2_3:+1994160 | Msa0270740:intron |
| TCAAAAGGTAAAACTGCTAC+TGG | 0.437504 | 2_3:-1996328 | None:intergenic |
| CGTATTGCTCCTGCAGTCTC+TGG | 0.440071 | 2_3:+1993449 | Msa0270740:CDS |
| TCAGTAAGAGTGAGTTTGCC+AGG | 0.440174 | 2_3:-1993939 | None:intergenic |
| TGGAAGAACACTTCAACAAA+AGG | 0.440603 | 2_3:+1995054 | Msa0270740:CDS |
| GAGTATGGACCTGATGAGTA+TGG | 0.441232 | 2_3:+1994670 | Msa0270740:CDS |
| AGTGGATGAAATCTCCATCT+TGG | 0.442947 | 2_3:+1995007 | Msa0270740:CDS |
| CGAGTAGAGAAGGCAAAAGT+TGG | 0.445116 | 2_3:+1994235 | Msa0270740:CDS |
| TGATGTCGGATTTCAAGTTA+TGG | 0.445504 | 2_3:+1992112 | Msa0270740:CDS |
| ATCGACCGCAAAATGCCATA+TGG | 0.446830 | 2_3:+1992161 | Msa0270740:CDS |
| CTGGAAAGGACATAAGTGTA+AGG | 0.451462 | 2_3:-1993165 | None:intergenic |
| GAATAAGAGAGCCATGAGAT+TGG | 0.456321 | 2_3:+1994192 | Msa0270740:CDS |
| GCTCGAGTTCCGGAGGGAAA+TGG | 0.457901 | 2_3:+1996252 | Msa0270740:CDS |
| TCCGCAAATGTTGAAGGGCC+TGG | 0.459300 | 2_3:-1994765 | None:intergenic |
| GCCGTGATCATCAGCATCAC+TGG | 0.459913 | 2_3:-1995790 | None:intergenic |
| CCTTCTCTGCATTGCTGGAA+AGG | 0.461809 | 2_3:-1993179 | None:intergenic |
| TTTCAGTGTTGCAGCATCAA+TGG | 0.463847 | 2_3:-1995181 | None:intergenic |
| GTGCTGGAATTTATTGACTT+GGG | 0.465419 | 2_3:+1994577 | Msa0270740:CDS |
| CTGAAAATGGTATCACTATC+CGG | 0.470032 | 2_3:-1996434 | None:intergenic |
| AGTTATGGAAGATATATTGA+TGG | 0.470473 | 2_3:+1992127 | Msa0270740:CDS |
| GAAGTGTCTACTTGCGGAAG+TGG | 0.475480 | 2_3:+1994989 | Msa0270740:CDS |
| AAGGAAAGAATGTACTTGAA+TGG | 0.477040 | 2_3:-1996202 | None:intergenic |
| TCACACGCGAGCTCGAGTTC+CGG | 0.478210 | 2_3:+1996242 | Msa0270740:CDS |
| CTTGAACTGAATCAAAGAAA+AGG | 0.478406 | 2_3:+1990556 | Msa0270740:five_prime_UTR |
| AACCAAAGCAAGGGTAAGTC+CGG | 0.478888 | 2_3:+1996415 | Msa0270740:CDS |
| TCCAGGCCCTTCAACATTTG+CGG | 0.483948 | 2_3:+1994764 | Msa0270740:CDS |
| TGCTGTGCTGATGTTAACTT+GGG | 0.486580 | 2_3:+1996159 | Msa0270740:CDS |
| TCGTCAATTTGGGGAAACTC+TGG | 0.487298 | 2_3:-1993846 | None:intergenic |
| GCAACTTCCGCAAATGTTGA+AGG | 0.489333 | 2_3:-1994771 | None:intergenic |
| GTCCAAGAAACCCAACAGTC+AGG | 0.490129 | 2_3:-1995461 | None:intergenic |
| ACATTAGGTCCATACTCATC+AGG | 0.492111 | 2_3:-1994679 | None:intergenic |
| AAGTAGAAGTAGAAGTAGAA+TGG | 0.492289 | 2_3:-1990675 | None:intergenic |
| AGATGTTCTCAACTGAATCA+TGG | 0.493438 | 2_3:-1990617 | None:intergenic |
| GAGGAGCCACACCTGACTGT+TGG | 0.496915 | 2_3:+1995450 | Msa0270740:CDS |
| GTAAGCTAGCCACGTGCTCA+TGG | 0.498875 | 2_3:-1993537 | None:intergenic |
| TAGGTCGAATTGGTGGGTGC+TGG | 0.499409 | 2_3:+1994561 | Msa0270740:intron |
| ACTTCAACCATCTTCAATGT+TGG | 0.500212 | 2_3:+1996620 | Msa0270740:three_prime_UTR |
| CAGAACAGGCTGCTTACTGT+TGG | 0.503796 | 2_3:-1993892 | None:intergenic |
| CAAGAAATGAGATAATAAGT+TGG | 0.506219 | 2_3:-1990640 | None:intergenic |
| GCAAAAGAAAGATTCCCATA+TGG | 0.513468 | 2_3:-1992176 | None:intergenic |
| AATATCAGCCTCTGGAAAGC+GGG | 0.514217 | 2_3:-1993117 | None:intergenic |
| CCTTTCCAGCAATGCAGAGA+AGG | 0.514369 | 2_3:+1993179 | Msa0270740:CDS |
| TCATACTTAGGTCGAATTGG+TGG | 0.514687 | 2_3:+1994554 | Msa0270740:intron |
| GCTGACAATCAGGAGCCTTA+AGG | 0.517159 | 2_3:+1995822 | Msa0270740:CDS |
| GTCTCTCAACCATTTCCCTC+CGG | 0.518293 | 2_3:-1996261 | None:intergenic |
| CAAACAAAAGTATCAGGTTG+TGG | 0.518733 | 2_3:+1995143 | Msa0270740:CDS |
| CGATGTTCATCCTTCTCTCC+AGG | 0.522452 | 2_3:+1992853 | Msa0270740:CDS |
| GAGGAGAAAATCTTATGCAT+TGG | 0.523563 | 2_3:+1993867 | Msa0270740:CDS |
| ACTTGGGAGGTGAGATGAGG+AGG | 0.526000 | 2_3:+1994593 | Msa0270740:CDS |
| GATGTTCTCAACTGAATCAT+GGG | 0.527238 | 2_3:-1990616 | None:intergenic |
| TTGTTATGAATATCAGCCTC+TGG | 0.529371 | 2_3:-1993125 | None:intergenic |
| TTTACTTTCTGGAAATCCAC+AGG | 0.530087 | 2_3:+1996002 | Msa0270740:CDS |
| ATATGAGAACTGAACGAGCT+TGG | 0.533561 | 2_3:-1994806 | None:intergenic |
| TGCAGGATGAGTGGATTGAC+TGG | 0.534598 | 2_3:+1992722 | Msa0270740:intron |
| GAGAATAATATGGCATGGCC+TGG | 0.536619 | 2_3:+1993921 | Msa0270740:CDS |
| TCATACTAGCACTTAGGTCA+TGG | 0.538906 | 2_3:-1990765 | None:intergenic |
| TGGAGGACAATATCACCATT+CGG | 0.539224 | 2_3:-1994841 | None:intergenic |
| TCGACCGCAAAATGCCATAT+GGG | 0.539432 | 2_3:+1992162 | Msa0270740:CDS |
| ATTCATAACAATGCTTGCCT+GGG | 0.539656 | 2_3:+1993137 | Msa0270740:CDS |
| ATGAGAACCAACATTGAAGA+TGG | 0.542342 | 2_3:-1996627 | None:intergenic |
| ACTTTGAAAAGCTAAGGCAC+TGG | 0.543129 | 2_3:+1995427 | Msa0270740:CDS |
| CATATTCTCAACGTCACGCA+TGG | 0.545300 | 2_3:-1995938 | None:intergenic |
| GAGAACTGAACGAGCTTGGT+AGG | 0.548947 | 2_3:-1994802 | None:intergenic |
| CACGCGAGCTCGAGTTCCGG+AGG | 0.549944 | 2_3:+1996245 | Msa0270740:CDS |
| TGATGGATTGCGAGTAGAGA+AGG | 0.549980 | 2_3:+1994225 | Msa0270740:CDS |
| AGTTAACAGCTAAAGTTTGG+AGG | 0.552405 | 2_3:-1994858 | None:intergenic |
| ATGCTGATGATCACGGCTGT+TGG | 0.555284 | 2_3:+1995796 | Msa0270740:CDS |
| TTGACTTGGGAGGTGAGATG+AGG | 0.556699 | 2_3:+1994590 | Msa0270740:CDS |
| TAATGGTATTGCTAGACTCC+AGG | 0.558014 | 2_3:+1994747 | Msa0270740:CDS |
| CATACTTAGGTCGAATTGGT+GGG | 0.558496 | 2_3:+1994555 | Msa0270740:intron |
| ACTTTAGCTGTTAACTATTG+GGG | 0.561658 | 2_3:+1994865 | Msa0270740:CDS |
| GAATGGAACAATGAAGAGAA+TGG | 0.562748 | 2_3:-1996185 | None:intergenic |
| ATATGAAGAATCCAAAGAGC+TGG | 0.562753 | 2_3:-1996543 | None:intergenic |
| ATTGATGCTGCAACACTGAA+AGG | 0.562919 | 2_3:+1995183 | Msa0270740:CDS |
| TCCAGTGATGCTGATGATCA+CGG | 0.563212 | 2_3:+1995789 | Msa0270740:CDS |
| AAAACTGCTACTGGAGCAGC+AGG | 0.563294 | 2_3:-1996319 | None:intergenic |
| CCCTTGCTTTGGTTTCCTGG+TGG | 0.568291 | 2_3:-1996406 | None:intergenic |
| CTTTGAAAAGCTAAGGCACT+GGG | 0.569092 | 2_3:+1995428 | Msa0270740:CDS |
| GAACATGTCGAAGAGAAGAA+AGG | 0.570428 | 2_3:-1996221 | None:intergenic |
| GGAAATGCCATCTTGATCAC+CGG | 0.576492 | 2_3:-1993516 | None:intergenic |
| AATACGAACAAAAGCCTCCT+CGG | 0.579655 | 2_3:-1993432 | None:intergenic |
| CTTGGGAGGTGAGATGAGGA+GGG | 0.580323 | 2_3:+1994594 | Msa0270740:CDS |
| TCTAGGGAGCTGGCTTATTG+GGG | 0.581399 | 2_3:+1994170 | Msa0270740:intron |
| TATGTATTGAGCAATTCAGC+AGG | 0.582629 | 2_3:+1992207 | Msa0270740:CDS |
| GTAAGCAGCCTGTTCTGAAG+TGG | 0.584299 | 2_3:+1993898 | Msa0270740:CDS |
| TGCTCCTGCAGTCTCTGGTG+TGG | 0.585301 | 2_3:+1993454 | Msa0270740:CDS |
| GAGTAGAGAAGGCAAAAGTT+GGG | 0.585980 | 2_3:+1994236 | Msa0270740:CDS |
| GCTCTTGCCGGTGATCAAGA+TGG | 0.590317 | 2_3:+1993509 | Msa0270740:CDS |
| TCAACCACACCAGAGACTGC+AGG | 0.591724 | 2_3:-1993458 | None:intergenic |
| AATAAGATATGCAGGATGAG+TGG | 0.593032 | 2_3:+1992713 | Msa0270740:intron |
| TGGAAAGGACATAAGTGTAA+GGG | 0.593431 | 2_3:-1993164 | None:intergenic |
| ATGGAATCATACTAGCACTT+AGG | 0.594258 | 2_3:-1990771 | None:intergenic |
| ATATGTAAGATCCAATCTCA+TGG | 0.594666 | 2_3:-1994203 | None:intergenic |
| ATCAGGAGCCTTAAGGAGCA+AGG | 0.597787 | 2_3:+1995829 | Msa0270740:CDS |
| TAAGCAGCCTGTTCTGAAGT+GGG | 0.599132 | 2_3:+1993899 | Msa0270740:CDS |
| TATAGGATCCCGCTTTCCAG+AGG | 0.599863 | 2_3:+1993109 | Msa0270740:intron |
| GTACACAATACCTGGAGAGA+AGG | 0.600769 | 2_3:-1992863 | None:intergenic |
| TGGATGAAATCTCCATCTTG+GGG | 0.602032 | 2_3:+1995009 | Msa0270740:CDS |
| GATTGAATGTATTGATGTCG+AGG | 0.603380 | 2_3:+1992015 | Msa0270740:CDS |
| ACCACCAGGAAACCAAAGCA+AGG | 0.604338 | 2_3:+1996405 | Msa0270740:CDS |
| CCTGATCCTGAAAATGATGT+CGG | 0.608502 | 2_3:+1992098 | Msa0270740:CDS |
| AGATGGTTGAAGTTAATGAG+AGG | 0.609992 | 2_3:-1996610 | None:intergenic |
| CAACTTCCGCAAATGTTGAA+GGG | 0.611672 | 2_3:-1994770 | None:intergenic |
| GAATATCAGCCTCTGGAAAG+CGG | 0.613934 | 2_3:-1993118 | None:intergenic |
| CCACCAGGAAACCAAAGCAA+GGG | 0.634475 | 2_3:+1996406 | Msa0270740:CDS |
| TATTTACAGAATGCACCGAA+TGG | 0.642261 | 2_3:+1994826 | Msa0270740:CDS |
| CTGGAATTTATTGACTTGGG+AGG | 0.644215 | 2_3:+1994580 | Msa0270740:CDS |
| AAAGATTGTGCACTGTGGGG+CGG | 0.646077 | 2_3:-1993481 | None:intergenic |
| TTGACGGAAGTGTCTACTTG+CGG | 0.657729 | 2_3:+1994983 | Msa0270740:CDS |
| AGTGGGAGAATAATATGGCA+TGG | 0.658208 | 2_3:+1993916 | Msa0270740:CDS |
| AGAGTTTCCCCAAATTGACG+AGG | 0.658413 | 2_3:+1993848 | Msa0270740:CDS |
| ACGCGAGCTCGAGTTCCGGA+GGG | 0.658637 | 2_3:+1996246 | Msa0270740:CDS |
| CTGGAGAGAAGGATGAACAT+CGG | 0.665857 | 2_3:-1992852 | None:intergenic |
| GTTGAGTAAGAATCATGTTG+TGG | 0.669931 | 2_3:+1995083 | Msa0270740:CDS |
| AGAAACCCAACAGTCAGGTG+TGG | 0.672520 | 2_3:-1995456 | None:intergenic |
| GGATGAAATCTCCATCTTGG+GGG | 0.678739 | 2_3:+1995010 | Msa0270740:CDS |
| ATGGCATTTCCATGAGCACG+TGG | 0.679080 | 2_3:+1993528 | Msa0270740:CDS |
| GAGAACAAATCAAAACCACC+AGG | 0.683386 | 2_3:+1996391 | Msa0270740:CDS |
| CCTTTGTCAGATAACAACTG+AGG | 0.688692 | 2_3:+1996135 | Msa0270740:intron |
| GAGTAAACTTGTCACCGAGG+AGG | 0.690606 | 2_3:+1993418 | Msa0270740:intron |
| GCAGGATGAGTGGATTGACT+GGG | 0.700024 | 2_3:+1992723 | Msa0270740:intron |
| TGAAAAGCTAAGGCACTGGG+AGG | 0.732429 | 2_3:+1995431 | Msa0270740:CDS |
| GCAGAGTAAACTTGTCACCG+AGG | 0.737987 | 2_3:+1993415 | Msa0270740:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGTTAATTTAATATCAA+TGG | + | chr2_3:1992589-1992608 | Msa0270740:intron | 10.0% |
| !!! | GTTTATTTATGATCAAATTT+TGG | + | chr2_3:1991336-1991355 | Msa0270740:intron | 15.0% |
| !!! | TGTTTAATTTAAGTAATAGT+AGG | - | chr2_3:1991364-1991383 | None:intergenic | 15.0% |
| !!! | TAATTATCCATAAACTTTTT+AGG | + | chr2_3:1991760-1991779 | Msa0270740:intron | 15.0% |
| !! | AATAAAATGGATGAATAAAA+TGG | - | chr2_3:1992991-1993010 | None:intergenic | 15.0% |
| !! | CTAATTGAAAATGAATAAAA+TGG | - | chr2_3:1993004-1993023 | None:intergenic | 15.0% |
| !! | TTATATAATCAACAAAAAGA+TGG | - | chr2_3:1993595-1993614 | None:intergenic | 15.0% |
| !! | ATTAGAAATATAATTGATCA+AGG | - | chr2_3:1995306-1995325 | None:intergenic | 15.0% |
| !!! | AATATCTTTTTTCTTTTGAT+TGG | + | chr2_3:1995323-1995342 | Msa0270740:intron | 15.0% |
| !!! | ATATCTTTTTTCTTTTGATT+GGG | + | chr2_3:1995324-1995343 | Msa0270740:intron | 15.0% |
| !!! | TTTCCTATACATTAATTTTT+AGG | + | chr2_3:1995484-1995503 | Msa0270740:CDS | 15.0% |
| !! | TTACCTAAAAATTAATGTAT+AGG | - | chr2_3:1995490-1995509 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTGTAAACTTAT+TGG | + | chr2_3:1995603-1995622 | Msa0270740:intron | 15.0% |
| !!! | TTTTTTTCTGTAAACTTATT+GGG | + | chr2_3:1995604-1995623 | Msa0270740:intron | 15.0% |
| !! | ATATTATATTATAATACCTG+TGG | - | chr2_3:1996021-1996040 | None:intergenic | 15.0% |
| !! | TTATAATATAATATCATGCA+TGG | + | chr2_3:1996027-1996046 | Msa0270740:intron | 15.0% |
| !! | ATTTAGTTATAACTTACATT+CGG | + | chr2_3:1996060-1996079 | Msa0270740:intron | 15.0% |
| !!! | TTTTTGCTGTAAATAAAAAT+AGG | + | chr2_3:1996498-1996517 | Msa0270740:three_prime_UTR | 15.0% |
| !!! | CTTCTCATTTTTTTTTTATA+AGG | + | chr2_3:1996663-1996682 | Msa0270740:three_prime_UTR | 15.0% |
| !!! | TAGGTTCTAAAATATGATAA+TGG | - | chr2_3:1990911-1990930 | None:intergenic | 20.0% |
| !! | TGTAAATGCAAATTATGTTA+TGG | + | chr2_3:1991003-1991022 | Msa0270740:intron | 20.0% |
| !!! | TAAGTATAAGCTATTTCTAT+AGG | - | chr2_3:1991150-1991169 | None:intergenic | 20.0% |
| !! | AAACATACATGGAATAATAT+AGG | - | chr2_3:1991262-1991281 | None:intergenic | 20.0% |
| !! | ACTTTCTTCTTTGTATAAAA+AGG | - | chr2_3:1991512-1991531 | None:intergenic | 20.0% |
| !!! | TTTTATACAAAGAAGAAAGT+AGG | + | chr2_3:1991512-1991531 | Msa0270740:intron | 20.0% |
| !! | AATCTATCCTAAAAAGTTTA+TGG | - | chr2_3:1991770-1991789 | None:intergenic | 20.0% |
| !! | TTCGTTAATATATTATCGTT+TGG | - | chr2_3:1992311-1992330 | None:intergenic | 20.0% |
| !! | ATATACCTATAAACATTTCA+AGG | - | chr2_3:1992484-1992503 | None:intergenic | 20.0% |
| !!! | GATACTATTATTTGACTTTT+TGG | + | chr2_3:1992689-1992708 | Msa0270740:intron | 20.0% |
| !!! | TTATTTGAGTTAACATTCAT+CGG | + | chr2_3:1994425-1994444 | Msa0270740:intron | 20.0% |
| !!! | TTTTACTTACATTCATACTT+AGG | + | chr2_3:1994542-1994561 | Msa0270740:intron | 20.0% |
| !!! | AATTAGTTTTCTCATATTCA+AGG | + | chr2_3:1995628-1995647 | Msa0270740:intron | 20.0% |
| !!! | ACTTGTTGAAAATGTTAATT+TGG | + | chr2_3:1995685-1995704 | Msa0270740:intron | 20.0% |
| !! | CTTGTTGAAAATGTTAATTT+GGG | + | chr2_3:1995686-1995705 | Msa0270740:intron | 20.0% |
| !!! | ATCTTTTGTATTGTATTTGA+CGG | - | chr2_3:1995901-1995920 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTATAAGGAGAG+AGG | + | chr2_3:1996670-1996689 | Msa0270740:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTATAAGGAGAGA+GGG | + | chr2_3:1996671-1996690 | Msa0270740:three_prime_UTR | 20.0% |
| !!! | TCATTCTACTTTTCGATTTA+TGG | + | chr2_3:1990528-1990547 | Msa0270740:five_prime_UTR | 25.0% |
| ! | CAAGAAATGAGATAATAAGT+TGG | - | chr2_3:1990643-1990662 | None:intergenic | 25.0% |
| !! | AAGTTTTCATTCAAGTCTTT+AGG | + | chr2_3:1990727-1990746 | Msa0270740:CDS | 25.0% |
| ! | AAAAAAGAGTGAGTAATGAA+TGG | - | chr2_3:1990793-1990812 | None:intergenic | 25.0% |
| !! | TATTGGATGTATGTTTCTAA+TGG | + | chr2_3:1990836-1990855 | Msa0270740:intron | 25.0% |
| ! | ACAAATAGGTGTTTAACTAA+TGG | - | chr2_3:1990934-1990953 | None:intergenic | 25.0% |
| !!! | AATAAGTTGTTTTTCCAAAC+AGG | + | chr2_3:1991208-1991227 | Msa0270740:intron | 25.0% |
| !!! | ATAAGTTGTTTTTCCAAACA+GGG | + | chr2_3:1991209-1991228 | Msa0270740:intron | 25.0% |
| ! | TAGCATATCATATTTGTACT+TGG | - | chr2_3:1991235-1991254 | None:intergenic | 25.0% |
| !! | TATTCCATGTATGTTTCTAA+TGG | + | chr2_3:1991266-1991285 | Msa0270740:intron | 25.0% |
| ! | AATTCCATTAGAAACATACA+TGG | - | chr2_3:1990843-1990862 | None:intergenic | 25.0% |
| ! | CTAATGATTCGATTTAATGT+CGG | + | chr2_3:1991478-1991497 | Msa0270740:intron | 25.0% |
| ! | TTGTGAGCTTAACTATTAAA+AGG | + | chr2_3:1991889-1991908 | Msa0270740:intron | 25.0% |
| ! | GGATAGAATCTTCAAAAAAT+TGG | - | chr2_3:1991989-1992008 | None:intergenic | 25.0% |
| ! | TCAATACATTCAATCTTTCT+TGG | - | chr2_3:1992010-1992029 | None:intergenic | 25.0% |
| ! | AGTTATGGAAGATATATTGA+TGG | + | chr2_3:1992127-1992146 | Msa0270740:CDS | 25.0% |
| ! | ATTCAAGACTAAGTTACATA+TGG | + | chr2_3:1992330-1992349 | Msa0270740:intron | 25.0% |
| !!! | TTTTTGGAAATAAGATATGC+AGG | + | chr2_3:1992705-1992724 | Msa0270740:intron | 25.0% |
| !! | TGTTTTGTATAAGTTAACCA+CGG | + | chr2_3:1992930-1992949 | Msa0270740:intron | 25.0% |
| ! | ATAAAATGGAATACCAAAAG+AGG | - | chr2_3:1992977-1992996 | None:intergenic | 25.0% |
| !! | TGAGTGATTTTCTTTTGTTA+GGG | + | chr2_3:1993305-1993324 | Msa0270740:intron | 25.0% |
| !!! | TATGATTTTGAGAGATCATT+TGG | + | chr2_3:1993384-1993403 | Msa0270740:intron | 25.0% |
| !!! | ATGATTTTGAGAGATCATTT+GGG | + | chr2_3:1993385-1993404 | Msa0270740:intron | 25.0% |
| ! | GTTGATTATATAATGACCTT+AGG | + | chr2_3:1993602-1993621 | Msa0270740:intron | 25.0% |
| ! | ACTAACTATCCAGATAAAAT+GGG | - | chr2_3:1993728-1993747 | None:intergenic | 25.0% |
| !! | TGATAAAGCAATCTATTTTG+AGG | + | chr2_3:1993959-1993978 | Msa0270740:CDS | 25.0% |
| !!! | TTCAAGATTTTAAGTAGGAT+TGG | + | chr2_3:1994031-1994050 | Msa0270740:intron | 25.0% |
| !! | TTTATGTTTTCTGATGTTCT+AGG | + | chr2_3:1994153-1994172 | Msa0270740:intron | 25.0% |
| !! | TTATGTTTTCTGATGTTCTA+GGG | + | chr2_3:1994154-1994173 | Msa0270740:intron | 25.0% |
| !!! | AATTCTAAGACAGAAAAAAC+TGG | - | chr2_3:1994343-1994362 | None:intergenic | 25.0% |
| !!! | TTTTTTCTGTCTTAGAATTG+TGG | + | chr2_3:1994344-1994363 | Msa0270740:intron | 25.0% |
| ! | AATAGTTAACAGCTAAAGTT+TGG | - | chr2_3:1994864-1994883 | None:intergenic | 25.0% |
| ! | AAACTTTAGCTGTTAACTAT+TGG | + | chr2_3:1994863-1994882 | Msa0270740:CDS | 25.0% |
| ! | AACTTTAGCTGTTAACTATT+GGG | + | chr2_3:1994864-1994883 | Msa0270740:CDS | 25.0% |
| ! | TTAAAAAGATCAATGTTGCT+TGG | - | chr2_3:1995213-1995232 | None:intergenic | 25.0% |
| !! | AAGCAACATTGATCTTTTTA+AGG | + | chr2_3:1995212-1995231 | Msa0270740:CDS | 25.0% |
| !!! | AACATTGATCTTTTTAAGGT+TGG | + | chr2_3:1995216-1995235 | Msa0270740:intron | 25.0% |
| ! | ATTAAAGGAACACAAAATCA+AGG | - | chr2_3:1995250-1995269 | None:intergenic | 25.0% |
| ! | GAAATTGTGAGAATCATTAA+AGG | - | chr2_3:1995265-1995284 | None:intergenic | 25.0% |
| !! | AAGGTTTTCTCAATAGTTAA+AGG | - | chr2_3:1995287-1995306 | None:intergenic | 25.0% |
| ! | ATTGGGTTTCAAAAGTAATA+TGG | + | chr2_3:1995341-1995360 | Msa0270740:intron | 25.0% |
| !! | TTCAAAGTTTTTGACAGTTA+AGG | - | chr2_3:1995415-1995434 | None:intergenic | 25.0% |
| !! | TCAAAAACTTTGAAAAGCTA+AGG | + | chr2_3:1995421-1995440 | Msa0270740:CDS | 25.0% |
| ! | AAATAATCATCTTCAGACAA+CGG | - | chr2_3:1995540-1995559 | None:intergenic | 25.0% |
| ! | TTTCAACAAGTATGTTCTAT+GGG | - | chr2_3:1995676-1995695 | None:intergenic | 25.0% |
| !! | TTTTCAACAAGTATGTTCTA+TGG | - | chr2_3:1995677-1995696 | None:intergenic | 25.0% |
| !! | ATACGTTCAATTTTACTTTC+TGG | + | chr2_3:1995991-1996010 | Msa0270740:CDS | 25.0% |
| !!! | TTTTTTTTATAAGGAGAGAG+GGG | + | chr2_3:1996672-1996691 | Msa0270740:three_prime_UTR | 25.0% |
| !!! | AGGGGTATTATTGATTATTT+AGG | + | chr2_3:1996690-1996709 | Msa0270740:three_prime_UTR | 25.0% |
| !! | GGGGTATTATTGATTATTTA+GGG | + | chr2_3:1996691-1996710 | Msa0270740:three_prime_UTR | 25.0% |
| GTGTATAGAGATAGAGATTT+AGG | - | chr2_3:1990403-1990422 | None:intergenic | 30.0% | |
| CTTGAACTGAATCAAAGAAA+AGG | + | chr2_3:1990556-1990575 | Msa0270740:five_prime_UTR | 30.0% | |
| TTGAAGAAGAAGAAGAAGAA+TGG | + | chr2_3:1990582-1990601 | Msa0270740:exon | 30.0% | |
| TGAAGAAGAAGAAGAAGAAT+GGG | + | chr2_3:1990583-1990602 | Msa0270740:exon | 30.0% | |
| AAGTAGAAGTAGAAGTAGAA+TGG | - | chr2_3:1990678-1990697 | None:intergenic | 30.0% | |
| ATAGGTGTTTAACTAATGGT+AGG | - | chr2_3:1990930-1990949 | None:intergenic | 30.0% | |
| ATCCAAAAAAACAAACAGTC+TGG | - | chr2_3:1990974-1990993 | None:intergenic | 30.0% | |
| AAATGGTAGCTTCTCAAATA+TGG | - | chr2_3:1991390-1991409 | None:intergenic | 30.0% | |
| AAAAACAAACAGTCTGGAAA+TGG | - | chr2_3:1991407-1991426 | None:intergenic | 30.0% | |
| !!! | TTTCCAGACTGTTTGTTTTT+TGG | + | chr2_3:1991407-1991426 | Msa0270740:intron | 30.0% |
| AATCCAAAAAACAAACAGTC+TGG | - | chr2_3:1991413-1991432 | None:intergenic | 30.0% | |
| CGACATTAAATCGAATCATT+AGG | - | chr2_3:1991480-1991499 | None:intergenic | 30.0% | |
| !! | CTCACAAACAGAAAGTATTA+AGG | - | chr2_3:1991876-1991895 | None:intergenic | 30.0% |
| GAAGAGACACTACATAATTT+AGG | - | chr2_3:1991935-1991954 | None:intergenic | 30.0% | |
| AATTATGTAGTGTCTCTTCT+TGG | + | chr2_3:1991936-1991955 | Msa0270740:intron | 30.0% | |
| ! | AACTTTTCTATACTGCTACT+TGG | + | chr2_3:1992272-1992291 | Msa0270740:intron | 30.0% |
| !! | ACTTTTCTATACTGCTACTT+GGG | + | chr2_3:1992273-1992292 | Msa0270740:intron | 30.0% |
| !! | TTATCGTTTGGTGTATTCAT+TGG | - | chr2_3:1992299-1992318 | None:intergenic | 30.0% |
| !! | TAATTGTTTTGTGCATTCCA+AGG | - | chr2_3:1992369-1992388 | None:intergenic | 30.0% |
| CTGTTATTACGTTGTTCTTA+CGG | - | chr2_3:1992408-1992427 | None:intergenic | 30.0% | |
| !! | TTTGGCCTTGAAATGTTTAT+AGG | + | chr2_3:1992476-1992495 | Msa0270740:intron | 30.0% |
| AGTATCTGTATCAGTTTGAT+AGG | - | chr2_3:1992675-1992694 | None:intergenic | 30.0% | |
| ATATAGTGATGCTCGTAATT+TGG | + | chr2_3:1992790-1992809 | Msa0270740:CDS | 30.0% | |
| !! | CTGCTTTAGATTTTTGTCAA+GGG | + | chr2_3:1992823-1992842 | Msa0270740:CDS | 30.0% |
| ! | AATTTGCATTTGACCTCTTT+TGG | + | chr2_3:1992961-1992980 | Msa0270740:intron | 30.0% |
| ! | GTGAGTGATTTTCTTTTGTT+AGG | + | chr2_3:1993304-1993323 | Msa0270740:intron | 30.0% |
| ! | TTCTTTTGTTAGGGATTTCT+TGG | + | chr2_3:1993314-1993333 | Msa0270740:intron | 30.0% |
| TTAAAAAGATTGTGCACTGT+GGG | - | chr2_3:1993488-1993507 | None:intergenic | 30.0% | |
| ATCCCTGAGTTAAAGATAAA+TGG | + | chr2_3:1993654-1993673 | Msa0270740:intron | 30.0% | |
| GACCATTTATCTTTAACTCA+GGG | - | chr2_3:1993659-1993678 | None:intergenic | 30.0% | |
| AGACCATTTATCTTTAACTC+AGG | - | chr2_3:1993660-1993679 | None:intergenic | 30.0% | |
| !! | GAACTAGAAGCATTTGAAAT+CGG | - | chr2_3:1993695-1993714 | None:intergenic | 30.0% |
| !! | TCAAATGCTTCTAGTTCATT+AGG | + | chr2_3:1993698-1993717 | Msa0270740:intron | 30.0% |
| CACTAACTATCCAGATAAAA+TGG | - | chr2_3:1993729-1993748 | None:intergenic | 30.0% | |
| !! | TCAGGTTCAAGATTTTAAGT+AGG | + | chr2_3:1994026-1994045 | Msa0270740:intron | 30.0% |
| !! | AGATTTTAAGTAGGATTGGT+AGG | + | chr2_3:1994035-1994054 | Msa0270740:intron | 30.0% |
| ATATGTAAGATCCAATCTCA+TGG | - | chr2_3:1994206-1994225 | None:intergenic | 30.0% | |
| AGATTGGATCTTACATATGA+TGG | + | chr2_3:1994208-1994227 | Msa0270740:CDS | 30.0% | |
| ACTTTAGCTGTTAACTATTG+GGG | + | chr2_3:1994865-1994884 | Msa0270740:CDS | 30.0% | |
| !! | AACCATGTTTTTGACATTGA+CGG | + | chr2_3:1994967-1994986 | Msa0270740:CDS | 30.0% |
| !!! | CTAGTACTTCTACTAGTTTT+TGG | + | chr2_3:1995034-1995053 | Msa0270740:CDS | 30.0% |
| !! | AACAAGCAAACAAAAGTATC+AGG | + | chr2_3:1995137-1995156 | Msa0270740:CDS | 30.0% |
| ! | TTTTTGACAGTTAAGGTGAT+AGG | - | chr2_3:1995408-1995427 | None:intergenic | 30.0% |
| ! | TTTTGTATTGTATTTGACGG+TGG | - | chr2_3:1995898-1995917 | None:intergenic | 30.0% |
| AAGGAAAGAATGTACTTGAA+TGG | - | chr2_3:1996205-1996224 | None:intergenic | 30.0% | |
| ! | CTAGATTCTTCGTTTTCAAA+AGG | - | chr2_3:1996346-1996365 | None:intergenic | 30.0% |
| GAAGAAGAAGAAGAAGAATG+GGG | + | chr2_3:1990584-1990603 | Msa0270740:exon | 35.0% | |
| GATGTTCTCAACTGAATCAT+GGG | - | chr2_3:1990619-1990638 | None:intergenic | 35.0% | |
| AGATGTTCTCAACTGAATCA+TGG | - | chr2_3:1990620-1990639 | None:intergenic | 35.0% | |
| ATGGAATCATACTAGCACTT+AGG | - | chr2_3:1990774-1990793 | None:intergenic | 35.0% | |
| AATGGTAGGTTCTCACAAAT+AGG | - | chr2_3:1990948-1990967 | None:intergenic | 35.0% | |
| AAACAAACAGTCTGGACTAA+TGG | - | chr2_3:1990966-1990985 | None:intergenic | 35.0% | |
| !!! | GTCCAGACTGTTTGTTTTTT+TGG | + | chr2_3:1990969-1990988 | Msa0270740:intron | 35.0% |
| ! | GTTTTCATAAGCAATCTTGG+AGG | - | chr2_3:1991081-1991100 | None:intergenic | 35.0% |
| !! | GCTGTTTTCATAAGCAATCT+TGG | - | chr2_3:1991084-1991103 | None:intergenic | 35.0% |
| ! | GATTGAATGTATTGATGTCG+AGG | + | chr2_3:1992015-1992034 | Msa0270740:CDS | 35.0% |
| ! | TGAAATCCGACATCATTTTC+AGG | - | chr2_3:1992107-1992126 | None:intergenic | 35.0% |
| !! | TGATGTCGGATTTCAAGTTA+TGG | + | chr2_3:1992112-1992131 | Msa0270740:CDS | 35.0% |
| GCAAAAGAAAGATTCCCATA+TGG | - | chr2_3:1992179-1992198 | None:intergenic | 35.0% | |
| TATGTATTGAGCAATTCAGC+AGG | + | chr2_3:1992207-1992226 | Msa0270740:CDS | 35.0% | |
| AATTCAGCAGGTGAATTACA+TGG | + | chr2_3:1992219-1992238 | Msa0270740:intron | 35.0% | |
| AAAAGACAAGACCATCGTTA+AGG | - | chr2_3:1992629-1992648 | None:intergenic | 35.0% | |
| AATAAGATATGCAGGATGAG+TGG | + | chr2_3:1992713-1992732 | Msa0270740:intron | 35.0% | |
| !! | GCTGCTTTAGATTTTTGTCA+AGG | + | chr2_3:1992822-1992841 | Msa0270740:CDS | 35.0% |
| TTGCTCTTGAACACGTTTAT+AGG | + | chr2_3:1993092-1993111 | Msa0270740:intron | 35.0% | |
| TTGTTATGAATATCAGCCTC+TGG | - | chr2_3:1993128-1993147 | None:intergenic | 35.0% | |
| TATTCATAACAATGCTTGCC+TGG | + | chr2_3:1993136-1993155 | Msa0270740:CDS | 35.0% | |
| ATTCATAACAATGCTTGCCT+GGG | + | chr2_3:1993137-1993156 | Msa0270740:CDS | 35.0% | |
| TGGAAAGGACATAAGTGTAA+GGG | - | chr2_3:1993167-1993186 | None:intergenic | 35.0% | |
| TAAAAAGATTGTGCACTGTG+GGG | - | chr2_3:1993487-1993506 | None:intergenic | 35.0% | |
| CTTAAAAAGATTGTGCACTG+TGG | - | chr2_3:1993489-1993508 | None:intergenic | 35.0% | |
| ! | CACAGTGCACAATCTTTTTA+AGG | + | chr2_3:1993487-1993506 | Msa0270740:CDS | 35.0% |
| !!! | AATCTTTTTAAGGCTCTTGC+CGG | + | chr2_3:1993497-1993516 | Msa0270740:CDS | 35.0% |
| ! | TTAGGTGTTCCCATTTTATC+TGG | + | chr2_3:1993716-1993735 | Msa0270740:intron | 35.0% |
| ! | TGCTGAACTTGTACTGATAT+TGG | + | chr2_3:1993787-1993806 | Msa0270740:intron | 35.0% |
| ! | ATTTTCTCCTCGTCAATTTG+GGG | - | chr2_3:1993858-1993877 | None:intergenic | 35.0% |
| ! | GATTTTCTCCTCGTCAATTT+GGG | - | chr2_3:1993859-1993878 | None:intergenic | 35.0% |
| ! | AGATTTTCTCCTCGTCAATT+TGG | - | chr2_3:1993860-1993879 | None:intergenic | 35.0% |
| GAGGAGAAAATCTTATGCAT+TGG | + | chr2_3:1993867-1993886 | Msa0270740:CDS | 35.0% | |
| ! | TCTGAAGTGGGAGAATAATA+TGG | + | chr2_3:1993911-1993930 | Msa0270740:CDS | 35.0% |
| GTAAAAGATCGTAAACACGA+GGG | + | chr2_3:1994061-1994080 | Msa0270740:intron | 35.0% | |
| !! | TCTGCTGTTTCTATTTCTTC+TGG | + | chr2_3:1994283-1994302 | Msa0270740:CDS | 35.0% |
| TCAAATAACCAGAACATCAG+AGG | - | chr2_3:1994413-1994432 | None:intergenic | 35.0% | |
| CAAAAAGCAACAGAGAAAAG+TGG | - | chr2_3:1994477-1994496 | None:intergenic | 35.0% | |
| CATTCATACTTAGGTCGAAT+TGG | + | chr2_3:1994551-1994570 | Msa0270740:intron | 35.0% | |
| !! | GTGCTGGAATTTATTGACTT+GGG | + | chr2_3:1994577-1994596 | Msa0270740:CDS | 35.0% |
| GAGTCTAGCAATACCATTAA+TGG | - | chr2_3:1994746-1994765 | None:intergenic | 35.0% | |
| TATTTACAGAATGCACCGAA+TGG | + | chr2_3:1994826-1994845 | Msa0270740:CDS | 35.0% | |
| AGTTAACAGCTAAAGTTTGG+AGG | - | chr2_3:1994861-1994880 | None:intergenic | 35.0% | |
| ! | TCGTTAGAAGTTCGATTTTC+TGG | - | chr2_3:1994931-1994950 | None:intergenic | 35.0% |
| TTCCGTCAATGTCAAAAACA+TGG | - | chr2_3:1994972-1994991 | None:intergenic | 35.0% | |
| TGGAAGAACACTTCAACAAA+AGG | + | chr2_3:1995054-1995073 | Msa0270740:CDS | 35.0% | |
| GTTGAGTAAGAATCATGTTG+TGG | + | chr2_3:1995083-1995102 | Msa0270740:CDS | 35.0% | |
| !! | CAAACAAAAGTATCAGGTTG+TGG | + | chr2_3:1995143-1995162 | Msa0270740:CDS | 35.0% |
| GATATATGAGAGCAAGTTTC+TGG | - | chr2_3:1995767-1995786 | None:intergenic | 35.0% | |
| ! | TTTACTTTCTGGAAATCCAC+AGG | + | chr2_3:1996002-1996021 | Msa0270740:CDS | 35.0% |
| GTTGTTATCTGACAAAGGAT+TGG | - | chr2_3:1996133-1996152 | None:intergenic | 35.0% | |
| GAATGGAACAATGAAGAGAA+TGG | - | chr2_3:1996188-1996207 | None:intergenic | 35.0% | |
| !! | TCACGAAACTTTTAAGAGAG+CGG | + | chr2_3:1996284-1996303 | Msa0270740:CDS | 35.0% |
| TCAAAAGGTAAAACTGCTAC+TGG | - | chr2_3:1996331-1996350 | None:intergenic | 35.0% | |
| TAGATCAGAAGTTTCCTTGA+AGG | + | chr2_3:1996363-1996382 | Msa0270740:CDS | 35.0% | |
| TTTGTTCTCAAGTTCCTTCA+AGG | - | chr2_3:1996380-1996399 | None:intergenic | 35.0% | |
| CTGAAAATGGTATCACTATC+CGG | - | chr2_3:1996437-1996456 | None:intergenic | 35.0% | |
| ! | GGATAGTGATACCATTTTCA+GGG | + | chr2_3:1996436-1996455 | Msa0270740:exon | 35.0% |
| ATATGAAGAATCCAAAGAGC+TGG | - | chr2_3:1996546-1996565 | None:intergenic | 35.0% | |
| AGATGGTTGAAGTTAATGAG+AGG | - | chr2_3:1996613-1996632 | None:intergenic | 35.0% | |
| ACTTCAACCATCTTCAATGT+TGG | + | chr2_3:1996620-1996639 | Msa0270740:three_prime_UTR | 35.0% | |
| ATGAGAACCAACATTGAAGA+TGG | - | chr2_3:1996630-1996649 | None:intergenic | 35.0% | |
| TCATACTAGCACTTAGGTCA+TGG | - | chr2_3:1990768-1990787 | None:intergenic | 40.0% | |
| AAACAGTCTGGACTAATGGT+AGG | - | chr2_3:1990962-1990981 | None:intergenic | 40.0% | |
| TATTTGTACTTGGCCCTGTT+TGG | - | chr2_3:1991225-1991244 | None:intergenic | 40.0% | |
| AAGAAAGTAGGAGCCAATGA+AGG | + | chr2_3:1991524-1991543 | Msa0270740:intron | 40.0% | |
| AAGTGCAGTTTAGGTGAGTA+GGG | - | chr2_3:1991703-1991722 | None:intergenic | 40.0% | |
| AAAGTGCAGTTTAGGTGAGT+AGG | - | chr2_3:1991704-1991723 | None:intergenic | 40.0% | |
| ACTCACCTAAACTGCACTTT+CGG | + | chr2_3:1991704-1991723 | Msa0270740:intron | 40.0% | |
| AGACTGTTTAGGAGAGCTTA+CGG | + | chr2_3:1991727-1991746 | Msa0270740:intron | 40.0% | |
| CCTGATCCTGAAAATGATGT+CGG | + | chr2_3:1992098-1992117 | Msa0270740:CDS | 40.0% | |
| ! | GATTCCCATATGGCATTTTG+CGG | - | chr2_3:1992169-1992188 | None:intergenic | 40.0% |
| ATGGTTTGAACTTGTGTCCT+TGG | + | chr2_3:1992349-1992368 | Msa0270740:intron | 40.0% | |
| GTTGTTCTTACGGTAGCTTT+GGG | - | chr2_3:1992398-1992417 | None:intergenic | 40.0% | |
| CCAAAGAAGAAACAAGAGAG+TGG | - | chr2_3:1992461-1992480 | None:intergenic | 40.0% | |
| ! | CCACTCTCTTGTTTCTTCTT+TGG | + | chr2_3:1992458-1992477 | Msa0270740:intron | 40.0% |
| TGTGATTCTTGTGCTAGCTA+TGG | + | chr2_3:1992565-1992584 | Msa0270740:intron | 40.0% | |
| GTGATTCTTGTGCTAGCTAT+GGG | + | chr2_3:1992566-1992585 | Msa0270740:intron | 40.0% | |
| TCTGAATCCTTCCTTAACGA+TGG | + | chr2_3:1992615-1992634 | Msa0270740:intron | 40.0% | |
| GCATCACTATATACAGCTTC+TGG | - | chr2_3:1992782-1992801 | None:intergenic | 40.0% | |
| ATAGAGCAGTACACAATACC+TGG | - | chr2_3:1992874-1992893 | None:intergenic | 40.0% | |
| ! | AGGTATTGTGTACTGCTCTA+TGG | + | chr2_3:1992873-1992892 | Msa0270740:intron | 40.0% |
| ATGCAAATTTGATGAGACCG+TGG | - | chr2_3:1992950-1992969 | None:intergenic | 40.0% | |
| ! | ATAAGTGTAAGGGTTTTCCC+AGG | - | chr2_3:1993157-1993176 | None:intergenic | 40.0% |
| CTGGAAAGGACATAAGTGTA+AGG | - | chr2_3:1993168-1993187 | None:intergenic | 40.0% | |
| CATTTCACATGCTCATAGAG+TGG | - | chr2_3:1993249-1993268 | None:intergenic | 40.0% | |
| AATACGAACAAAAGCCTCCT+CGG | - | chr2_3:1993435-1993454 | None:intergenic | 40.0% | |
| TGCTTGAATGTCTTCTCCTA+AGG | - | chr2_3:1993621-1993640 | None:intergenic | 40.0% | |
| GTAGAGTACGTCGAGAAAAT+AGG | + | chr2_3:1993811-1993830 | Msa0270740:intron | 40.0% | |
| TTATTCTCCCACTTCAGAAC+AGG | - | chr2_3:1993909-1993928 | None:intergenic | 40.0% | |
| AGTGGGAGAATAATATGGCA+TGG | + | chr2_3:1993916-1993935 | Msa0270740:CDS | 40.0% | |
| CTGTCTCATACAATGTAGTC+AGG | + | chr2_3:1994008-1994027 | Msa0270740:intron | 40.0% | |
| ! | TTTAAGTAGGATTGGTAGGC+TGG | + | chr2_3:1994039-1994058 | Msa0270740:intron | 40.0% |
| GGTAAAAGATCGTAAACACG+AGG | + | chr2_3:1994060-1994079 | Msa0270740:intron | 40.0% | |
| TCGTAACACGATTCGTAAGT+AGG | + | chr2_3:1994084-1994103 | Msa0270740:intron | 40.0% | |
| ACACGATTCGTAAGTAGGAT+TGG | + | chr2_3:1994089-1994108 | Msa0270740:intron | 40.0% | |
| ! | GATTCGTAAGTAGGATTGGT+AGG | + | chr2_3:1994093-1994112 | Msa0270740:intron | 40.0% |
| GAATAAGAGAGCCATGAGAT+TGG | + | chr2_3:1994192-1994211 | Msa0270740:CDS | 40.0% | |
| GAGTAGAGAAGGCAAAAGTT+GGG | + | chr2_3:1994236-1994255 | Msa0270740:CDS | 40.0% | |
| TCAAAAAGCGAAGACCCTAA+AGG | - | chr2_3:1994262-1994281 | None:intergenic | 40.0% | |
| AAAGCAACAGAGAAAAGTGG+AGG | - | chr2_3:1994474-1994493 | None:intergenic | 40.0% | |
| TCATACTTAGGTCGAATTGG+TGG | + | chr2_3:1994554-1994573 | Msa0270740:intron | 40.0% | |
| CATACTTAGGTCGAATTGGT+GGG | + | chr2_3:1994555-1994574 | Msa0270740:intron | 40.0% | |
| ! | GGTGCTGGAATTTATTGACT+TGG | + | chr2_3:1994576-1994595 | Msa0270740:CDS | 40.0% |
| !! | CTGGAATTTATTGACTTGGG+AGG | + | chr2_3:1994580-1994599 | Msa0270740:CDS | 40.0% |
| ACATTAGGTCCATACTCATC+AGG | - | chr2_3:1994682-1994701 | None:intergenic | 40.0% | |
| ! | GTATGGACCTAATGTTTTCG+AGG | + | chr2_3:1994687-1994706 | Msa0270740:CDS | 40.0% |
| TAATGGTATTGCTAGACTCC+AGG | + | chr2_3:1994747-1994766 | Msa0270740:CDS | 40.0% | |
| CAACTTCCGCAAATGTTGAA+GGG | - | chr2_3:1994773-1994792 | None:intergenic | 40.0% | |
| ATATGAGAACTGAACGAGCT+TGG | - | chr2_3:1994809-1994828 | None:intergenic | 40.0% | |
| TGGAGGACAATATCACCATT+CGG | - | chr2_3:1994844-1994863 | None:intergenic | 40.0% | |
| TAACTATTGGGGAAGTCAAC+TGG | + | chr2_3:1994876-1994895 | Msa0270740:CDS | 40.0% | |
| !!! | TTCGATTTTCTGGCTGATAG+CGG | - | chr2_3:1994921-1994940 | None:intergenic | 40.0% |
| AGTGGATGAAATCTCCATCT+TGG | + | chr2_3:1995007-1995026 | Msa0270740:CDS | 40.0% | |
| GTGGATGAAATCTCCATCTT+GGG | + | chr2_3:1995008-1995027 | Msa0270740:CDS | 40.0% | |
| TGGATGAAATCTCCATCTTG+GGG | + | chr2_3:1995009-1995028 | Msa0270740:CDS | 40.0% | |
| TTTCAGTGTTGCAGCATCAA+TGG | - | chr2_3:1995184-1995203 | None:intergenic | 40.0% | |
| ATTGATGCTGCAACACTGAA+AGG | + | chr2_3:1995183-1995202 | Msa0270740:CDS | 40.0% | |
| ! | ACTTTGAAAAGCTAAGGCAC+TGG | + | chr2_3:1995427-1995446 | Msa0270740:CDS | 40.0% |
| ! | CTTTGAAAAGCTAAGGCACT+GGG | + | chr2_3:1995428-1995447 | Msa0270740:CDS | 40.0% |
| CGGCAGAACAAAGAAAAATG+AGG | - | chr2_3:1995520-1995539 | None:intergenic | 40.0% | |
| ! | GTTTCTGGAAAGACACAACA+AGG | - | chr2_3:1995752-1995771 | None:intergenic | 40.0% |
| CCTCAGTTGTTATCTGACAA+AGG | - | chr2_3:1996138-1996157 | None:intergenic | 40.0% | |
| CCTTTGTCAGATAACAACTG+AGG | + | chr2_3:1996135-1996154 | Msa0270740:intron | 40.0% | |
| ! | TTGCTGTGCTGATGTTAACT+TGG | + | chr2_3:1996158-1996177 | Msa0270740:CDS | 40.0% |
| ! | TGCTGTGCTGATGTTAACTT+GGG | + | chr2_3:1996159-1996178 | Msa0270740:CDS | 40.0% |
| GAACATGTCGAAGAGAAGAA+AGG | - | chr2_3:1996224-1996243 | None:intergenic | 40.0% | |
| GAGAACAAATCAAAACCACC+AGG | + | chr2_3:1996391-1996410 | Msa0270740:CDS | 40.0% | |
| ! | CGGATAGTGATACCATTTTC+AGG | + | chr2_3:1996435-1996454 | Msa0270740:exon | 40.0% |
| TCTGTAAGCAACCCTGAAAA+TGG | - | chr2_3:1996450-1996469 | None:intergenic | 40.0% | |
| !! | CTAGCTTTTAACCAGCTCTT+TGG | + | chr2_3:1996532-1996551 | Msa0270740:three_prime_UTR | 40.0% |
| AAGTAGGAGCCAATGAAGGT+TGG | + | chr2_3:1991528-1991547 | Msa0270740:intron | 45.0% | |
| CCAACTAAGCCAACCTTCAT+TGG | - | chr2_3:1991540-1991559 | None:intergenic | 45.0% | |
| !! | CCAATGAAGGTTGGCTTAGT+TGG | + | chr2_3:1991537-1991556 | Msa0270740:intron | 45.0% |
| !! | TGAAGGTTGGCTTAGTTGGT+TGG | + | chr2_3:1991541-1991560 | Msa0270740:intron | 45.0% |
| ! | AAGAAGTTGACTCACCCAGA+AGG | + | chr2_3:1991565-1991584 | Msa0270740:intron | 45.0% |
| GTACTTACAACCCACCAAAG+AGG | - | chr2_3:1991624-1991643 | None:intergenic | 45.0% | |
| GGCTCAAAGAGTGGTAACAA+AGG | - | chr2_3:1991646-1991665 | None:intergenic | 45.0% | |
| TTACCACTCTTTGAGCCTTG+AGG | + | chr2_3:1991649-1991668 | Msa0270740:intron | 45.0% | |
| AGTTTAGGTGAGTAGGGCTT+TGG | - | chr2_3:1991697-1991716 | None:intergenic | 45.0% | |
| ! | AGTCTCCGAAAGTGCAGTTT+AGG | - | chr2_3:1991712-1991731 | None:intergenic | 45.0% |
| TGCACTTTCGGAGACTGTTT+AGG | + | chr2_3:1991716-1991735 | Msa0270740:intron | 45.0% | |
| ! | CTTTGACCAGTTTTTGCGAG+CGG | - | chr2_3:1992071-1992090 | None:intergenic | 45.0% |
| TCGCAAAAACTGGTCAAAGC+CGG | + | chr2_3:1992072-1992091 | Msa0270740:CDS | 45.0% | |
| !! | CATTTTCAGGATCAGGCTTC+CGG | - | chr2_3:1992094-1992113 | None:intergenic | 45.0% |
| !! | CCGACATCATTTTCAGGATC+AGG | - | chr2_3:1992101-1992120 | None:intergenic | 45.0% |
| ATCGACCGCAAAATGCCATA+TGG | + | chr2_3:1992161-1992180 | Msa0270740:CDS | 45.0% | |
| TCGACCGCAAAATGCCATAT+GGG | + | chr2_3:1992162-1992181 | Msa0270740:CDS | 45.0% | |
| CGTTGTTCTTACGGTAGCTT+TGG | - | chr2_3:1992399-1992418 | None:intergenic | 45.0% | |
| ! | GCGTTCTCTTCACAAGTTGA+TGG | + | chr2_3:1992518-1992537 | Msa0270740:intron | 45.0% |
| GACAAGACCATCGTTAAGGA+AGG | - | chr2_3:1992625-1992644 | None:intergenic | 45.0% | |
| CTGGAGAGAAGGATGAACAT+CGG | - | chr2_3:1992855-1992874 | None:intergenic | 45.0% | |
| GTACACAATACCTGGAGAGA+AGG | - | chr2_3:1992866-1992885 | None:intergenic | 45.0% | |
| ! | AATATCAGCCTCTGGAAAGC+GGG | - | chr2_3:1993120-1993139 | None:intergenic | 45.0% |
| ! | GAATATCAGCCTCTGGAAAG+CGG | - | chr2_3:1993121-1993140 | None:intergenic | 45.0% |
| TGCAGAGAAGGCTTCTTTAC+AGG | + | chr2_3:1993191-1993210 | Msa0270740:CDS | 45.0% | |
| GGAAATGCCATCTTGATCAC+CGG | - | chr2_3:1993519-1993538 | None:intergenic | 45.0% | |
| TCGTCAATTTGGGGAAACTC+TGG | - | chr2_3:1993849-1993868 | None:intergenic | 45.0% | |
| AGAGTTTCCCCAAATTGACG+AGG | + | chr2_3:1993848-1993867 | Msa0270740:CDS | 45.0% | |
| !! | TAAGCAGCCTGTTCTGAAGT+GGG | + | chr2_3:1993899-1993918 | Msa0270740:CDS | 45.0% |
| GAGAATAATATGGCATGGCC+TGG | + | chr2_3:1993921-1993940 | Msa0270740:CDS | 45.0% | |
| TCAGTAAGAGTGAGTTTGCC+AGG | - | chr2_3:1993942-1993961 | None:intergenic | 45.0% | |
| !! | TTTCTGATGTTCTAGGGAGC+TGG | + | chr2_3:1994160-1994179 | Msa0270740:intron | 45.0% |
| ! | TTCTAGGGAGCTGGCTTATT+GGG | + | chr2_3:1994169-1994188 | Msa0270740:intron | 45.0% |
| !! | TGATGGATTGCGAGTAGAGA+AGG | + | chr2_3:1994225-1994244 | Msa0270740:CDS | 45.0% |
| CGAGTAGAGAAGGCAAAAGT+TGG | + | chr2_3:1994235-1994254 | Msa0270740:CDS | 45.0% | |
| AAGGCAAAAGTTGGGCCTTT+AGG | + | chr2_3:1994244-1994263 | Msa0270740:CDS | 45.0% | |
| AGGCAAAAGTTGGGCCTTTA+GGG | + | chr2_3:1994245-1994264 | Msa0270740:CDS | 45.0% | |
| CACAAGTTCACGCATGAGTA+TGG | + | chr2_3:1994655-1994674 | Msa0270740:CDS | 45.0% | |
| GAGTATGGACCTGATGAGTA+TGG | + | chr2_3:1994670-1994689 | Msa0270740:CDS | 45.0% | |
| TTGCGAGCCTCGAAAACATT+AGG | - | chr2_3:1994697-1994716 | None:intergenic | 45.0% | |
| !! | AATGTTTTCGAGGCTCGCAA+AGG | + | chr2_3:1994697-1994716 | Msa0270740:CDS | 45.0% |
| GCAACTTCCGCAAATGTTGA+AGG | - | chr2_3:1994774-1994793 | None:intergenic | 45.0% | |
| !!! | TCGATTTTCTGGCTGATAGC+GGG | - | chr2_3:1994920-1994939 | None:intergenic | 45.0% |
| !! | TTGACGGAAGTGTCTACTTG+CGG | + | chr2_3:1994983-1995002 | Msa0270740:CDS | 45.0% |
| GGATGAAATCTCCATCTTGG+GGG | + | chr2_3:1995010-1995029 | Msa0270740:CDS | 45.0% | |
| CAGTAATCATGTTCCTGTGC+AGG | + | chr2_3:1995371-1995390 | Msa0270740:intron | 45.0% | |
| GGAAATATTAGCTCCTGCAC+AGG | - | chr2_3:1995387-1995406 | None:intergenic | 45.0% | |
| GGAAAGACACAACAAGGAAG+TGG | - | chr2_3:1995746-1995765 | None:intergenic | 45.0% | |
| TCCAGTGATGCTGATGATCA+CGG | + | chr2_3:1995789-1995808 | Msa0270740:CDS | 45.0% | |
| CTGTTGGAATGCTGACAATC+AGG | + | chr2_3:1995812-1995831 | Msa0270740:CDS | 45.0% | |
| CATATTCTCAACGTCACGCA+TGG | - | chr2_3:1995941-1995960 | None:intergenic | 45.0% | |
| !! | CGAAACTTTTAAGAGAGCGG+TGG | + | chr2_3:1996287-1996306 | Msa0270740:CDS | 45.0% |
| ! | TTACCCTTGCTTTGGTTTCC+TGG | - | chr2_3:1996412-1996431 | None:intergenic | 45.0% |
| AACCAAAGCAAGGGTAAGTC+CGG | + | chr2_3:1996415-1996434 | Msa0270740:CDS | 45.0% | |
| !!! | TTTTTTTAATTTCTTATTAT+TGG | + | chr2_3:1990819-1990838 | Msa0270740:intron | 5.0% |
| !! | AAAACATAAATAAAATAATA+TGG | - | chr2_3:1994143-1994162 | None:intergenic | 5.0% |
| TTCAGCTCCTGCTATCAGCA+CGG | + | chr2_3:1991595-1991614 | Msa0270740:intron | 50.0% | |
| TAGCCTCAAGGCTCAAAGAG+TGG | - | chr2_3:1991655-1991674 | None:intergenic | 50.0% | |
| !! | TAGGGCTTTGGAGCTCAACA+GGG | - | chr2_3:1991685-1991704 | None:intergenic | 50.0% |
| ACTTCTCCGCTCGCAAAAAC+TGG | + | chr2_3:1992062-1992081 | Msa0270740:CDS | 50.0% | |
| !! | TGCAGGATGAGTGGATTGAC+TGG | + | chr2_3:1992722-1992741 | Msa0270740:intron | 50.0% |
| !! | GCAGGATGAGTGGATTGACT+GGG | + | chr2_3:1992723-1992742 | Msa0270740:intron | 50.0% |
| CGATGTTCATCCTTCTCTCC+AGG | + | chr2_3:1992853-1992872 | Msa0270740:CDS | 50.0% | |
| TATAGGATCCCGCTTTCCAG+AGG | + | chr2_3:1993109-1993128 | Msa0270740:intron | 50.0% | |
| CCTTCTCTGCATTGCTGGAA+AGG | - | chr2_3:1993182-1993201 | None:intergenic | 50.0% | |
| CCTTTCCAGCAATGCAGAGA+AGG | + | chr2_3:1993179-1993198 | Msa0270740:CDS | 50.0% | |
| AGAAGCCTTCTCTGCATTGC+TGG | - | chr2_3:1993187-1993206 | None:intergenic | 50.0% | |
| GCAGAGTAAACTTGTCACCG+AGG | + | chr2_3:1993415-1993434 | Msa0270740:intron | 50.0% | |
| GAGTAAACTTGTCACCGAGG+AGG | + | chr2_3:1993418-1993437 | Msa0270740:intron | 50.0% | |
| AAAGATTGTGCACTGTGGGG+CGG | - | chr2_3:1993484-1993503 | None:intergenic | 50.0% | |
| ATGGCATTTCCATGAGCACG+TGG | + | chr2_3:1993528-1993547 | Msa0270740:CDS | 50.0% | |
| CAGAACAGGCTGCTTACTGT+TGG | - | chr2_3:1993895-1993914 | None:intergenic | 50.0% | |
| !! | GTAAGCAGCCTGTTCTGAAG+TGG | + | chr2_3:1993898-1993917 | Msa0270740:CDS | 50.0% |
| !! | GTTCTAGGGAGCTGGCTTAT+TGG | + | chr2_3:1994168-1994187 | Msa0270740:intron | 50.0% |
| ! | TCTAGGGAGCTGGCTTATTG+GGG | + | chr2_3:1994170-1994189 | Msa0270740:intron | 50.0% |
| AACCACGTCCTCTGATGTTC+TGG | + | chr2_3:1994402-1994421 | Msa0270740:intron | 50.0% | |
| AACCAGAACATCAGAGGACG+TGG | - | chr2_3:1994407-1994426 | None:intergenic | 50.0% | |
| AAGTGGAGGACACATGCTGT+GGG | - | chr2_3:1994460-1994479 | None:intergenic | 50.0% | |
| AAAGTGGAGGACACATGCTG+TGG | - | chr2_3:1994461-1994480 | None:intergenic | 50.0% | |
| !! | TTGACTTGGGAGGTGAGATG+AGG | + | chr2_3:1994590-1994609 | Msa0270740:CDS | 50.0% |
| GTGAGATGAGGAGGGATGTT+TGG | + | chr2_3:1994602-1994621 | Msa0270740:CDS | 50.0% | |
| ! | GCAACGAGCAGTGCCATTAA+TGG | + | chr2_3:1994730-1994749 | Msa0270740:CDS | 50.0% |
| TCCAGGCCCTTCAACATTTG+CGG | + | chr2_3:1994764-1994783 | Msa0270740:CDS | 50.0% | |
| GAGAACTGAACGAGCTTGGT+AGG | - | chr2_3:1994805-1994824 | None:intergenic | 50.0% | |
| TGGGGAAGTCAACTGGTTAC+AGG | + | chr2_3:1994883-1994902 | Msa0270740:CDS | 50.0% | |
| ! | GAAGTGTCTACTTGCGGAAG+TGG | + | chr2_3:1994989-1995008 | Msa0270740:CDS | 50.0% |
| ! | GAAGTACTAGACCCCCAAGA+TGG | - | chr2_3:1995024-1995043 | None:intergenic | 50.0% |
| CTGCTCTTTCAGTGAGCGTT+AGG | - | chr2_3:1995113-1995132 | None:intergenic | 50.0% | |
| !! | TGAAAAGCTAAGGCACTGGG+AGG | + | chr2_3:1995431-1995450 | Msa0270740:CDS | 50.0% |
| AGAAACCCAACAGTCAGGTG+TGG | - | chr2_3:1995459-1995478 | None:intergenic | 50.0% | |
| CACCTGACTGTTGGGTTTCT+TGG | + | chr2_3:1995459-1995478 | Msa0270740:CDS | 50.0% | |
| GTCCAAGAAACCCAACAGTC+AGG | - | chr2_3:1995464-1995483 | None:intergenic | 50.0% | |
| ATGCTGATGATCACGGCTGT+TGG | + | chr2_3:1995796-1995815 | Msa0270740:CDS | 50.0% | |
| GCTGACAATCAGGAGCCTTA+AGG | + | chr2_3:1995822-1995841 | Msa0270740:CDS | 50.0% | |
| ATCAGGAGCCTTAAGGAGCA+AGG | + | chr2_3:1995829-1995848 | Msa0270740:CDS | 50.0% | |
| GTCTCTCAACCATTTCCCTC+CGG | - | chr2_3:1996264-1996283 | None:intergenic | 50.0% | |
| AAAACTGCTACTGGAGCAGC+AGG | - | chr2_3:1996322-1996341 | None:intergenic | 50.0% | |
| ACCACCAGGAAACCAAAGCA+AGG | + | chr2_3:1996405-1996424 | Msa0270740:CDS | 50.0% | |
| CCACCAGGAAACCAAAGCAA+GGG | + | chr2_3:1996406-1996425 | Msa0270740:CDS | 50.0% | |
| ATCCGGACTTACCCTTGCTT+TGG | - | chr2_3:1996420-1996439 | None:intergenic | 50.0% | |
| AGCTGAACGCACGACCTTCT+GGG | - | chr2_3:1991582-1991601 | None:intergenic | 55.0% | |
| TCAGCTCCTGCTATCAGCAC+GGG | + | chr2_3:1991596-1991615 | Msa0270740:intron | 55.0% | |
| TATCAGCACGGGGACCTCTT+TGG | + | chr2_3:1991607-1991626 | Msa0270740:intron | 55.0% | |
| ! | CAGGGTCTGAACTAGCCTCA+AGG | - | chr2_3:1991667-1991686 | None:intergenic | 55.0% |
| !! | GTAGGGCTTTGGAGCTCAAC+AGG | - | chr2_3:1991686-1991705 | None:intergenic | 55.0% |
| CGTATTGCTCCTGCAGTCTC+TGG | + | chr2_3:1993449-1993468 | Msa0270740:CDS | 55.0% | |
| TCAACCACACCAGAGACTGC+AGG | - | chr2_3:1993461-1993480 | None:intergenic | 55.0% | |
| GCTCTTGCCGGTGATCAAGA+TGG | + | chr2_3:1993509-1993528 | Msa0270740:CDS | 55.0% | |
| GTAAGCTAGCCACGTGCTCA+TGG | - | chr2_3:1993540-1993559 | None:intergenic | 55.0% | |
| ! | TAGGTCGAATTGGTGGGTGC+TGG | + | chr2_3:1994561-1994580 | Msa0270740:intron | 55.0% |
| ACTTGGGAGGTGAGATGAGG+AGG | + | chr2_3:1994593-1994612 | Msa0270740:CDS | 55.0% | |
| CTTGGGAGGTGAGATGAGGA+GGG | + | chr2_3:1994594-1994613 | Msa0270740:CDS | 55.0% | |
| TCCGCAAATGTTGAAGGGCC+TGG | - | chr2_3:1994768-1994787 | None:intergenic | 55.0% | |
| AGGAGCCACACCTGACTGTT+GGG | + | chr2_3:1995451-1995470 | Msa0270740:CDS | 55.0% | |
| GCCGTGATCATCAGCATCAC+TGG | - | chr2_3:1995793-1995812 | None:intergenic | 55.0% | |
| TTAAGGAGCAAGGCCGCCTT+GGG | + | chr2_3:1995839-1995858 | Msa0270740:CDS | 55.0% | |
| CGCCAAAAAATCGCCCAAGG+CGG | - | chr2_3:1995855-1995874 | None:intergenic | 55.0% | |
| !!! | CGCCTTGGGCGATTTTTTGG+CGG | + | chr2_3:1995853-1995872 | Msa0270740:CDS | 55.0% |
| CTCCGCCAAAAAATCGCCCA+AGG | - | chr2_3:1995858-1995877 | None:intergenic | 55.0% | |
| ! | CCCTTGCTTTGGTTTCCTGG+TGG | - | chr2_3:1996409-1996428 | None:intergenic | 55.0% |
| GAGCTGAACGCACGACCTTC+TGG | - | chr2_3:1991583-1991602 | None:intergenic | 60.0% | |
| CAGCTCCTGCTATCAGCACG+GGG | + | chr2_3:1991597-1991616 | Msa0270740:intron | 60.0% | |
| AGCACGGGGACCTCTTTGGT+GGG | + | chr2_3:1991611-1991630 | Msa0270740:intron | 60.0% | |
| TGCTCCTGCAGTCTCTGGTG+TGG | + | chr2_3:1993454-1993473 | Msa0270740:CDS | 60.0% | |
| GAGGAGCCACACCTGACTGT+TGG | + | chr2_3:1995450-1995469 | Msa0270740:CDS | 60.0% | |
| CAAGGCGGCCTTGCTCCTTA+AGG | - | chr2_3:1995840-1995859 | None:intergenic | 60.0% | |
| CTTAAGGAGCAAGGCCGCCT+TGG | + | chr2_3:1995838-1995857 | Msa0270740:CDS | 60.0% | |
| !!! | GGCCGCCTTGGGCGATTTTT+TGG | + | chr2_3:1995850-1995869 | Msa0270740:CDS | 60.0% |
| TCACACGCGAGCTCGAGTTC+CGG | + | chr2_3:1996242-1996261 | Msa0270740:CDS | 60.0% | |
| GCTCGAGTTCCGGAGGGAAA+TGG | + | chr2_3:1996252-1996271 | Msa0270740:CDS | 60.0% | |
| ! | GAGGTCCCCGTGCTGATAGC+AGG | - | chr2_3:1991605-1991624 | None:intergenic | 65.0% |
| CAGCACGGGGACCTCTTTGG+TGG | + | chr2_3:1991610-1991629 | Msa0270740:intron | 65.0% | |
| ACGCGAGCTCGAGTTCCGGA+GGG | + | chr2_3:1996246-1996265 | Msa0270740:CDS | 65.0% | |
| CACGCGAGCTCGAGTTCCGG+AGG | + | chr2_3:1996245-1996264 | Msa0270740:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 1990379 | 1996728 | 1990379 | ID=Msa0270740;Name=Msa0270740 |
| chr2_3 | mRNA | 1990379 | 1996728 | 1990379 | ID=Msa0270740-mRNA-1;Parent=Msa0270740;Name=Msa0270740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=185|1|1|1|0.90|0.83|12|287|817 |
| chr2_3 | exon | 1990379 | 1990427 | 1990379 | ID=Msa0270740-mRNA-1:exon:1010;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1990465 | 1990781 | 1990465 | ID=Msa0270740-mRNA-1:exon:1011;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1992000 | 1992228 | 1992000 | ID=Msa0270740-mRNA-1:exon:1012;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1992727 | 1992874 | 1992727 | ID=Msa0270740-mRNA-1:exon:1013;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1993114 | 1993212 | 1993114 | ID=Msa0270740-mRNA-1:exon:1014;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1993419 | 1993576 | 1993419 | ID=Msa0270740-mRNA-1:exon:1015;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1993815 | 1993980 | 1993815 | ID=Msa0270740-mRNA-1:exon:1016;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1994175 | 1994311 | 1994175 | ID=Msa0270740-mRNA-1:exon:1017;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1994564 | 1995233 | 1994564 | ID=Msa0270740-mRNA-1:exon:1018;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1995393 | 1995505 | 1995393 | ID=Msa0270740-mRNA-1:exon:1019;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1995768 | 1996023 | 1995768 | ID=Msa0270740-mRNA-1:exon:1020;Parent=Msa0270740-mRNA-1 |
| chr2_3 | exon | 1996145 | 1996728 | 1996145 | ID=Msa0270740-mRNA-1:exon:1021;Parent=Msa0270740-mRNA-1 |
| chr2_3 | five_prime_UTR | 1990379 | 1990427 | 1990379 | ID=Msa0270740-mRNA-1:five_prime_utr;Parent=Msa0270740-mRNA-1 |
| chr2_3 | five_prime_UTR | 1990465 | 1990600 | 1990465 | ID=Msa0270740-mRNA-1:five_prime_utr;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1990601 | 1990781 | 1990601 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1992000 | 1992228 | 1992000 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1992727 | 1992874 | 1992727 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1993114 | 1993212 | 1993114 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1993419 | 1993576 | 1993419 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1993815 | 1993980 | 1993815 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1994175 | 1994311 | 1994175 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1994564 | 1995233 | 1994564 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1995393 | 1995505 | 1995393 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1995768 | 1996023 | 1995768 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | CDS | 1996145 | 1996441 | 1996145 | ID=Msa0270740-mRNA-1:cds;Parent=Msa0270740-mRNA-1 |
| chr2_3 | three_prime_UTR | 1996442 | 1996728 | 1996442 | ID=Msa0270740-mRNA-1:three_prime_utr;Parent=Msa0270740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
