Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516160 | XP_003602229.2 | 98.671 | 677 | 9 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1378 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516160 | sp|Q9LV04|PAP14_ARATH | 67.834 | 628 | 189 | 5 | 52 | 675 | 51 | 669 | 0.0 | 875 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516160 | G7J6U8 | 98.671 | 677 | 9 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1378 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035980 | Msa0516160 | 0.801872 | 7.334036e-49 | -8.615850e-47 |
| Msa0036060 | Msa0516160 | 0.804978 | 1.666195e-49 | -8.615850e-47 |
| Msa0197180 | Msa0516160 | 0.882523 | 9.704073e-71 | -8.615850e-47 |
| Msa0225880 | Msa0516160 | 0.811593 | 6.479166e-51 | -8.615850e-47 |
| Msa0376340 | Msa0516160 | 0.993822 | 1.763613e-202 | -8.615850e-47 |
| Msa0424780 | Msa0516160 | 0.979956 | 4.043848e-149 | -8.615850e-47 |
| Msa0435010 | Msa0516160 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0238940 | Msa0516160 | 0.877039 | 8.647248e-69 | -8.615850e-47 |
| Msa0260470 | Msa0516160 | 0.813520 | 2.455783e-51 | -8.615850e-47 |
| Msa0270740 | Msa0516160 | 0.809003 | 2.344904e-50 | -8.615850e-47 |
| Msa0304110 | Msa0516160 | 0.816451 | 5.494408e-52 | -8.615850e-47 |
| Msa0308770 | Msa0516160 | 0.855193 | 7.436219e-62 | -8.615850e-47 |
| Msa0309480 | Msa0516160 | 0.805236 | 1.471296e-49 | -8.615850e-47 |
| Msa0316750 | Msa0516160 | 0.864708 | 1.001162e-64 | -8.615850e-47 |
| Msa0318070 | Msa0516160 | 0.800012 | 1.759479e-48 | -8.615850e-47 |
| Msa0341190 | Msa0516160 | 0.815364 | 9.603557e-52 | -8.615850e-47 |
| Msa0504410 | Msa0516160 | 0.822304 | 2.544103e-53 | -8.615850e-47 |
| Msa0516160 | Msa0629440 | -0.867453 | 1.352991e-65 | -8.615850e-47 |
| Msa0516160 | Msa0644770 | -0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa0516160 | Msa0667070 | -0.868113 | 8.307398e-66 | -8.615850e-47 |
| Msa0516160 | Msa0713210 | 0.823433 | 1.388945e-53 | -8.615850e-47 |
| Msa0516160 | Msa0713220 | 0.816131 | 6.477513e-52 | -8.615850e-47 |
| Msa0516160 | Msa0713230 | 0.862466 | 4.966769e-64 | -8.615850e-47 |
| Msa0516160 | Msa0754350 | 0.800654 | 1.302400e-48 | -8.615850e-47 |
| Msa0516160 | Msa0755080 | 0.869879 | 2.223968e-66 | -8.615850e-47 |
| Msa0516160 | Msa0772500 | 0.806358 | 8.549519e-50 | -8.615850e-47 |
| Msa0516160 | Msa0796950 | 0.842846 | 2.015353e-58 | -8.615850e-47 |
| Msa0516160 | Msa0797000 | 0.817557 | 3.099989e-52 | -8.615850e-47 |
| Msa0516160 | Msa0801360 | 0.823391 | 1.420456e-53 | -8.615850e-47 |
| Msa0516160 | Msa0834450 | 0.868714 | 5.315969e-66 | -8.615850e-47 |
| Msa0516160 | Msa0834460 | 0.800447 | 1.435303e-48 | -8.615850e-47 |
| Msa0516160 | Msa0839830 | 0.822999 | 1.753939e-53 | -8.615850e-47 |
| Msa0516160 | Msa1012920 | 0.812448 | 4.218303e-51 | -8.615850e-47 |
| Msa0516160 | Msa1075590 | 0.801946 | 7.081993e-49 | -8.615850e-47 |
| Msa0516160 | Msa1137090 | 0.801487 | 8.800098e-49 | -8.615850e-47 |
| Msa0516160 | Msa1162980 | 0.808142 | 3.582012e-50 | -8.615850e-47 |
| Msa0516160 | Msa1174870 | 0.820945 | 5.245471e-53 | -8.615850e-47 |
| Msa0516160 | Msa1204600 | -0.840219 | 9.919985e-58 | -8.615850e-47 |
| Msa0516160 | Msa1232270 | 0.816773 | 4.651119e-52 | -8.615850e-47 |
| Msa0516160 | Msa1234690 | 0.806127 | 9.565451e-50 | -8.615850e-47 |
| Msa0516160 | Msa1234730 | 0.806365 | 8.520533e-50 | -8.615850e-47 |
| Msa0516160 | Msa1304320 | -0.806555 | 7.771508e-50 | -8.615850e-47 |
| Msa0516160 | Msa1315110 | 0.804404 | 2.195839e-49 | -8.615850e-47 |
| Msa0516160 | Msa1329420 | -0.812084 | 5.065042e-51 | -8.615850e-47 |
| Msa0516160 | Msa1329580 | -0.802206 | 6.262228e-49 | -8.615850e-47 |
| Msa0516160 | Msa1412620 | -0.846073 | 2.730836e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516160 | MtrunA17_Chr3g0126681 | 98.671 | 677 | 9 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1378 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0516160 | AT5G53450.1 | 67.834 | 628 | 189 | 5 | 52 | 675 | 51 | 669 | 0.0 | 875 |
| Msa0516160 | AT5G53450.2 | 69.140 | 593 | 175 | 4 | 87 | 675 | 1 | 589 | 0.0 | 850 |
| Msa0516160 | AT5G53450.3 | 73.171 | 410 | 104 | 2 | 52 | 460 | 51 | 455 | 0.0 | 620 |
Find 217 sgRNAs with CRISPR-Local
Find 478 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGAATAGGAGATATTT+AGG | 0.120251 | 3_4:+67599423 | Msa0516160:five_prime_UTR |
| GTTCAAAATGTCAGACTTTA+AGG | 0.129862 | 3_4:+67600216 | Msa0516160:CDS |
| TCTTCTTCCCTTTCTCATTC+TGG | 0.159701 | 3_4:+67599573 | Msa0516160:five_prime_UTR |
| TGCCCACTTCATTGACTTAT+TGG | 0.179035 | 3_4:+67604645 | Msa0516160:CDS |
| AACTGGGCCATACCGGATTT+TGG | 0.209176 | 3_4:+67599967 | Msa0516160:CDS |
| TCCCTTTCTCATTCTGGTTC+TGG | 0.211362 | 3_4:+67599579 | Msa0516160:five_prime_UTR |
| CTTTGATATGTCTGTCTATT+GGG | 0.212760 | 3_4:-67601276 | None:intergenic |
| ACTTTGATATGTCTGTCTAT+TGG | 0.221644 | 3_4:-67601277 | None:intergenic |
| TTTGACAAATCAAATATTTC+AGG | 0.222651 | 3_4:-67605508 | None:intergenic |
| AACTGGCTGGAGCTGCTTCC+AGG | 0.254995 | 3_4:+67604986 | Msa0516160:CDS |
| TTGATGAGAGATCTTCTAAT+TGG | 0.256001 | 3_4:+67601066 | Msa0516160:CDS |
| CTCGTTCTTCGAGGGGTTAA+TGG | 0.264678 | 3_4:+67605565 | Msa0516160:CDS |
| CCAAACCTTCTCGGAGAATA+AGG | 0.274308 | 3_4:+67603942 | Msa0516160:CDS |
| CTGGAGGTCCCGCAATTTCT+AGG | 0.275529 | 3_4:+67601022 | Msa0516160:CDS |
| TGGAGCTGCTTCCAGGAAAA+TGG | 0.295461 | 3_4:+67604993 | Msa0516160:CDS |
| AATGGTAATGGGAGAGCTTA+TGG | 0.295872 | 3_4:+67602235 | Msa0516160:CDS |
| CGCAGATGCTTGATAGGAAC+TGG | 0.312588 | 3_4:+67603882 | Msa0516160:intron |
| CCACAAAAGACCTTGTAAAT+AGG | 0.336553 | 3_4:-67605597 | None:intergenic |
| ATGCAAACGGAAGAGGTCTT+TGG | 0.344391 | 3_4:-67600166 | None:intergenic |
| TTGCTAGCAATAAAGATAAA+AGG | 0.349174 | 3_4:-67603919 | None:intergenic |
| ACAATGGCACTTTGTAGAAC+TGG | 0.349658 | 3_4:+67599950 | Msa0516160:exon |
| AAGAATGATACAAAAGTTTA+CGG | 0.352849 | 3_4:-67600664 | None:intergenic |
| TCTTACTCAATGCAAGTTCA+TGG | 0.355670 | 3_4:+67600683 | Msa0516160:CDS |
| ACAGTTGTTTGGATGCTCTA+AGG | 0.356940 | 3_4:+67604283 | Msa0516160:intron |
| CTTTCCTTCGTCTCTGACAT+TGG | 0.357555 | 3_4:+67605133 | Msa0516160:CDS |
| TCATGAATTACCTTTGGCTT+TGG | 0.361109 | 3_4:-67604685 | None:intergenic |
| AGATTGGCTTCAAACTTTAG+AGG | 0.363419 | 3_4:+67600948 | Msa0516160:CDS |
| TGCTAGCAACCAAACCTTCT+CGG | 0.365898 | 3_4:+67603933 | Msa0516160:CDS |
| AGCTAAAGCCTCCTCATTGC+CGG | 0.372894 | 3_4:-67605305 | None:intergenic |
| GCATTTCAGATAACTAAGTT+TGG | 0.373211 | 3_4:-67605779 | None:intergenic |
| TTTCCAGCCTCAACTCTGTA+TGG | 0.381724 | 3_4:-67601240 | None:intergenic |
| CCTTATTCTCCGAGAAGGTT+TGG | 0.381787 | 3_4:-67603942 | None:intergenic |
| CCTGTTCCCCTGCGTTTCGC+TGG | 0.387171 | 3_4:+67600043 | Msa0516160:CDS |
| TAAGGCACCCATTCCTTTGT+GGG | 0.389110 | 3_4:+67604301 | Msa0516160:CDS |
| TGAAATGTTCTACAGTTGTT+TGG | 0.391603 | 3_4:+67604272 | Msa0516160:intron |
| TTGGCTGCAGGGAGACTTGA+TGG | 0.392350 | 3_4:-67605379 | None:intergenic |
| AGGCTCTCATTCCGCCCTTC+CGG | 0.392663 | 3_4:+67605286 | Msa0516160:CDS |
| CTAAGGCACCCATTCCTTTG+TGG | 0.393568 | 3_4:+67604300 | Msa0516160:CDS |
| TCAAGAAGTCTGTTCTGGTT+AGG | 0.393706 | 3_4:+67605807 | Msa0516160:three_prime_UTR |
| AAGAGAATAGGAGATATTTA+GGG | 0.395033 | 3_4:+67599424 | Msa0516160:five_prime_UTR |
| TGCGAGGATGGTTCAAATAG+AGG | 0.402772 | 3_4:+67602058 | Msa0516160:CDS |
| AACCCGTGGCAAAACGTTCC+CGG | 0.402816 | 3_4:+67599469 | Msa0516160:five_prime_UTR |
| TGGTTCAAATAGAGGCTCTA+TGG | 0.411364 | 3_4:+67602066 | Msa0516160:CDS |
| CCAGCGAAACGCAGGGGAAC+AGG | 0.418450 | 3_4:-67600043 | None:intergenic |
| ATGGAGTTGATGAATAATAT+AGG | 0.418735 | 3_4:-67599536 | None:intergenic |
| ATCTTGGCCCACAAAGGAAT+GGG | 0.427323 | 3_4:-67604308 | None:intergenic |
| GAACCACTACCACCACTTGC+AGG | 0.429048 | 3_4:-67600719 | None:intergenic |
| ATTGGATTCTCAGTCATGAT+TGG | 0.433535 | 3_4:+67605151 | Msa0516160:CDS |
| ATTGCACTGGGAGGCATGTT+GGG | 0.434475 | 3_4:+67605026 | Msa0516160:CDS |
| AACTCTCCATATGGAAATGC+TGG | 0.437695 | 3_4:+67603758 | Msa0516160:CDS |
| TCTTCATTTATACTAAGAGC+TGG | 0.440657 | 3_4:+67605226 | Msa0516160:CDS |
| CCCTGCAGCCAAGTTTGCGT+CGG | 0.442632 | 3_4:+67605390 | Msa0516160:CDS |
| CAAGGTTGCTCGTTCTTCGA+GGG | 0.443241 | 3_4:+67605557 | Msa0516160:CDS |
| CTTGATAGGAACTGGGGTGC+TGG | 0.444714 | 3_4:+67603890 | Msa0516160:CDS |
| ACTGGCTTCAACAGTCAGAT+TGG | 0.445941 | 3_4:+67600932 | Msa0516160:CDS |
| GCAAGGTTAAGGACAGTGTT+AGG | 0.447501 | 3_4:+67600383 | Msa0516160:CDS |
| GATCGTGTTAGCATTGGCCT+TGG | 0.450399 | 3_4:+67600244 | Msa0516160:CDS |
| CGTGTTAGCATTGGCCTTGG+TGG | 0.453499 | 3_4:+67600247 | Msa0516160:CDS |
| CGCAATTGCCTAGAAATTGC+GGG | 0.453953 | 3_4:-67601030 | None:intergenic |
| ATCTGCATCTGCTTCTTCAA+TGG | 0.455111 | 3_4:+67600126 | Msa0516160:CDS |
| CCCGACGCAAACTTGGCTGC+AGG | 0.456334 | 3_4:-67605391 | None:intergenic |
| TTAGCATTGGCCTTGGTGGA+CGG | 0.458317 | 3_4:+67600251 | Msa0516160:CDS |
| CTCGGCAGAAACTCTCCATA+TGG | 0.459506 | 3_4:+67603749 | Msa0516160:CDS |
| AATATCACCCGACGCAAACT+TGG | 0.460107 | 3_4:-67605398 | None:intergenic |
| CGTTTGCATGGAGGAGGAAA+CGG | 0.461428 | 3_4:+67600180 | Msa0516160:CDS |
| TCAAGGTTGCTCGTTCTTCG+AGG | 0.464225 | 3_4:+67605556 | Msa0516160:CDS |
| TGTAAGCCAGCATTTCCATA+TGG | 0.466848 | 3_4:-67603764 | None:intergenic |
| TAGCATTGGCCTTGGTGGAC+GGG | 0.468949 | 3_4:+67600252 | Msa0516160:CDS |
| GATATTATCAGATGGGGTCT+AGG | 0.469138 | 3_4:+67604351 | Msa0516160:CDS |
| CATTCCTTTGTGGGCCAAGA+TGG | 0.470311 | 3_4:+67604310 | Msa0516160:CDS |
| TTGACAAATCAAATATTTCA+GGG | 0.473307 | 3_4:-67605507 | None:intergenic |
| TTGATGGAAACTCCTTGAAA+GGG | 0.473643 | 3_4:-67605363 | None:intergenic |
| GCGGATGAGGTGGTGTTTGA+AGG | 0.474409 | 3_4:+67600361 | Msa0516160:CDS |
| TATTGCACTGGGAGGCATGT+TGG | 0.474879 | 3_4:+67605025 | Msa0516160:CDS |
| ATGTTTGCGACAGCTTATGA+TGG | 0.477520 | 3_4:+67603721 | Msa0516160:CDS |
| TCGAGGAAAACGAGCAATAG+AGG | 0.477773 | 3_4:+67600543 | Msa0516160:CDS |
| CTCCTCCATGCAAACGGAAG+AGG | 0.478760 | 3_4:-67600173 | None:intergenic |
| TGGCGCCTATTGTATTGCAC+TGG | 0.478793 | 3_4:+67605013 | Msa0516160:CDS |
| CTTCAAGGTATTGAAGAAGC+TGG | 0.479242 | 3_4:+67600637 | Msa0516160:intron |
| ATTACCTTTGGCTTTGGATG+AGG | 0.480526 | 3_4:-67604679 | None:intergenic |
| TACTTAACAGGTCGGTACAC+TGG | 0.480880 | 3_4:+67602018 | Msa0516160:intron |
| CCTGCAGCCAAGTTTGCGTC+GGG | 0.481345 | 3_4:+67605391 | Msa0516160:CDS |
| GCCTCCCAGTGCAATACAAT+AGG | 0.481435 | 3_4:-67605018 | None:intergenic |
| TTGAACTTTGCGAATATCAA+AGG | 0.482258 | 3_4:-67602260 | None:intergenic |
| GAGAAAGGGAAGAAGAGTAT+TGG | 0.483685 | 3_4:-67599566 | None:intergenic |
| CACTGGACGAAGAATCTGTT+AGG | 0.487203 | 3_4:+67600980 | Msa0516160:CDS |
| CACCAGAACCAGAATGAGAA+AGG | 0.489960 | 3_4:-67599581 | None:intergenic |
| ATCTGTGTTACAAAGATGCA+TGG | 0.496023 | 3_4:+67602196 | Msa0516160:intron |
| CAGTCATGATTGGTCAGGAC+TGG | 0.496294 | 3_4:+67605161 | Msa0516160:CDS |
| TAGTAGAGAATCAAAGTTGA+AGG | 0.500017 | 3_4:+67605105 | Msa0516160:CDS |
| CATCTTGGCCCACAAAGGAA+TGG | 0.503376 | 3_4:-67604309 | None:intergenic |
| AAGGTAGGAGAAGACACAAC+TGG | 0.503564 | 3_4:+67601003 | Msa0516160:CDS |
| ATTCTCAGTCATGATTGGTC+AGG | 0.504324 | 3_4:+67605156 | Msa0516160:CDS |
| AAAGACCTCTTCCGTTTGCA+TGG | 0.506817 | 3_4:+67600168 | Msa0516160:CDS |
| CTCTTCCGTTTGCATGGAGG+AGG | 0.508865 | 3_4:+67600174 | Msa0516160:CDS |
| CTTCATTTATACTAAGAGCT+GGG | 0.510302 | 3_4:+67605227 | Msa0516160:CDS |
| GGACATTACTCTCCAAAATC+CGG | 0.512133 | 3_4:-67599979 | None:intergenic |
| GGTGTTTGAAGGCAAGGTTA+AGG | 0.513946 | 3_4:+67600372 | Msa0516160:CDS |
| GACGGGACTACTCGCCATCT+TGG | 0.515034 | 3_4:-67604324 | None:intergenic |
| ATAGGAACTGGGGTGCTGGT+TGG | 0.515505 | 3_4:+67603894 | Msa0516160:CDS |
| CATGACAAAGCTGGTAAAAG+AGG | 0.515642 | 3_4:+67605187 | Msa0516160:CDS |
| GAAGAGTATTGGATGGAACA+TGG | 0.515807 | 3_4:-67599555 | None:intergenic |
| TAACTCTTGTGTTATACAAA+GGG | 0.516202 | 3_4:-67600486 | None:intergenic |
| TTTAGAGGCCACTCTTGCAC+TGG | 0.516388 | 3_4:+67600963 | Msa0516160:CDS |
| CCTCCTGTCCGTGTACTAGT+TGG | 0.516400 | 3_4:+67605064 | Msa0516160:CDS |
| CACATATAAATTTGTCGACA+AGG | 0.518285 | 3_4:+67600011 | Msa0516160:CDS |
| CGTTTCCTCCTCCATGCAAA+CGG | 0.520200 | 3_4:-67600179 | None:intergenic |
| GTTCATTTATCCTAGTCCAC+GGG | 0.521851 | 3_4:+67600738 | Msa0516160:CDS |
| TTTGTAGAACTGGGCCATAC+CGG | 0.523525 | 3_4:+67599960 | Msa0516160:CDS |
| CTTGATGGAAACTCCTTGAA+AGG | 0.524857 | 3_4:-67605364 | None:intergenic |
| ATTTACATGAAAGTGTGCTC+TGG | 0.524859 | 3_4:-67605737 | None:intergenic |
| ATGATTGTCCAGCGAAACGC+AGG | 0.526569 | 3_4:-67600051 | None:intergenic |
| CTGTTCTGGTTAGGAACTGT+AGG | 0.528092 | 3_4:+67605816 | Msa0516160:three_prime_UTR |
| CAATGGCACTTTGTAGAACT+GGG | 0.530134 | 3_4:+67599951 | Msa0516160:exon |
| TGGTAAAAGAGGAAGGGTGC+AGG | 0.532874 | 3_4:+67605198 | Msa0516160:CDS |
| ATCTGATAATATCCATCGAC+GGG | 0.535110 | 3_4:-67604341 | None:intergenic |
| GGTTCATTTATCCTAGTCCA+CGG | 0.538254 | 3_4:+67600737 | Msa0516160:CDS |
| CCGCCCTTCCGGCAATGAGG+AGG | 0.538522 | 3_4:+67605297 | Msa0516160:CDS |
| GTACATTTATCGTCAGCCTC+AGG | 0.540143 | 3_4:+67604401 | Msa0516160:CDS |
| AAGGGAAGAAGAGTATTGGA+TGG | 0.542115 | 3_4:-67599562 | None:intergenic |
| GTCAGAGACGAAGGAAAGGT+TGG | 0.543516 | 3_4:-67605128 | None:intergenic |
| TTCCAGCCTCAACTCTGTAT+GGG | 0.543666 | 3_4:-67601239 | None:intergenic |
| AGATACATACCCCGTGGACT+AGG | 0.544042 | 3_4:-67600748 | None:intergenic |
| AACATAATAAGAAAGAGAAT+AGG | 0.544411 | 3_4:+67599412 | Msa0516160:five_prime_UTR |
| TGAGGTGGTGTTTGAAGGCA+AGG | 0.544552 | 3_4:+67600366 | Msa0516160:CDS |
| CTAGTACACGGACAGGAGGT+TGG | 0.544865 | 3_4:-67605060 | None:intergenic |
| ACTTAACAGGTCGGTACACT+GGG | 0.545500 | 3_4:+67602019 | Msa0516160:intron |
| ATAACTCTTGTGTTATACAA+AGG | 0.547349 | 3_4:-67600487 | None:intergenic |
| GATTGTGTGTGGAACTTATG+TGG | 0.547710 | 3_4:+67605531 | Msa0516160:CDS |
| GACAAATCAAATATTTCAGG+GGG | 0.549563 | 3_4:-67605505 | None:intergenic |
| AATTTATATGTGAATAAGCT+AGG | 0.549732 | 3_4:-67600000 | None:intergenic |
| TGCCCATACAGAGTTGAGGC+TGG | 0.551335 | 3_4:+67601237 | Msa0516160:CDS |
| GTCGATGGATATTATCAGAT+GGG | 0.551619 | 3_4:+67604344 | Msa0516160:CDS |
| TAGAGGCTCTATGGAAAACA+TGG | 0.554608 | 3_4:+67602075 | Msa0516160:CDS |
| GATCAGCTCTCCTATTTACA+AGG | 0.554698 | 3_4:+67605587 | Msa0516160:CDS |
| TTCTTCGTCCAGTGCAAGAG+TGG | 0.555251 | 3_4:-67600971 | None:intergenic |
| TGAATAATATAGGAAGAAGA+AGG | 0.557377 | 3_4:-67599526 | None:intergenic |
| TTCAAGGTATTGAAGAAGCT+GGG | 0.558924 | 3_4:+67600638 | Msa0516160:intron |
| ATCTCGTTGCCTGCAAGTGG+TGG | 0.559120 | 3_4:+67600710 | Msa0516160:CDS |
| AAAGCCTCCTCATTGCCGGA+AGG | 0.559182 | 3_4:-67605301 | None:intergenic |
| ATGGCGAGTAGTCCCGTCGA+TGG | 0.559384 | 3_4:+67604329 | Msa0516160:CDS |
| AGGAAACGGATCATGTTATG+AGG | 0.560637 | 3_4:+67600194 | Msa0516160:CDS |
| TTGCCTGCAAGTGGTGGTAG+TGG | 0.560869 | 3_4:+67600716 | Msa0516160:CDS |
| TCGCAATTGCCTAGAAATTG+CGG | 0.561333 | 3_4:-67601031 | None:intergenic |
| CGTCGATGGATATTATCAGA+TGG | 0.561808 | 3_4:+67604343 | Msa0516160:CDS |
| GCTCTATGGAAAACATGGAC+AGG | 0.562416 | 3_4:+67602080 | Msa0516160:CDS |
| GAAGAATCTGTTAGGAAGGT+AGG | 0.562509 | 3_4:+67600988 | Msa0516160:CDS |
| GCATACCTTATTCTCCGAGA+AGG | 0.565490 | 3_4:-67603947 | None:intergenic |
| GACTGGCCTCATGACAAAGC+TGG | 0.565510 | 3_4:+67605178 | Msa0516160:CDS |
| ACCAGAACCAGAATGAGAAA+GGG | 0.566680 | 3_4:-67599580 | None:intergenic |
| ACAAAGCTGGTAAAAGAGGA+AGG | 0.567006 | 3_4:+67605191 | Msa0516160:CDS |
| GTTAATTACCTGCATAGTCA+TGG | 0.568531 | 3_4:+67601211 | Msa0516160:CDS |
| CCGACGCAAACTTGGCTGCA+GGG | 0.569318 | 3_4:-67605390 | None:intergenic |
| GTTGCGTGCTACAGAACGCC+GGG | 0.570077 | 3_4:-67599487 | None:intergenic |
| TTCAATGGAGTCGCATGAAG+AGG | 0.571118 | 3_4:+67600141 | Msa0516160:CDS |
| CACGGACAGGAGGTTGGCGA+AGG | 0.572597 | 3_4:-67605054 | None:intergenic |
| AAGCCTCCTCATTGCCGGAA+GGG | 0.572759 | 3_4:-67605300 | None:intergenic |
| TCTGTGTTACAAAGATGCAT+GGG | 0.575090 | 3_4:+67602197 | Msa0516160:intron |
| GGGCAAGACCATGACTATGC+AGG | 0.575441 | 3_4:-67601219 | None:intergenic |
| TTACTCTCCAAAATCCGGTA+TGG | 0.584502 | 3_4:-67599974 | None:intergenic |
| GCTGGACAATCATCAAATGC+AGG | 0.586031 | 3_4:+67600061 | Msa0516160:CDS |
| TTATACTAAGAGCTGGGAGA+CGG | 0.586602 | 3_4:+67605233 | Msa0516160:CDS |
| TCTCCAACTAGTACACGGAC+AGG | 0.586958 | 3_4:-67605067 | None:intergenic |
| CCTCCTCATTGCCGGAAGGG+CGG | 0.591041 | 3_4:-67605297 | None:intergenic |
| GCAGATGCTTGATAGGAACT+GGG | 0.593828 | 3_4:+67603883 | Msa0516160:intron |
| TGACAAATCAAATATTTCAG+GGG | 0.599665 | 3_4:-67605506 | None:intergenic |
| CTCCAATAAGTCAATGAAGT+GGG | 0.600928 | 3_4:-67604647 | None:intergenic |
| CAATGTCAGAGACGAAGGAA+AGG | 0.601326 | 3_4:-67605132 | None:intergenic |
| GGCGCCTATTGTATTGCACT+GGG | 0.603294 | 3_4:+67605014 | Msa0516160:CDS |
| CACTGCAATGCGTATTAGTG+AGG | 0.603654 | 3_4:+67604377 | Msa0516160:CDS |
| AGAATAGGAGATATTTAGGG+AGG | 0.605436 | 3_4:+67599427 | Msa0516160:five_prime_UTR |
| AAGGTTGCTCGTTCTTCGAG+GGG | 0.606778 | 3_4:+67605558 | Msa0516160:CDS |
| ATAAGCTGTCGCAAACATGA+AGG | 0.607676 | 3_4:-67603716 | None:intergenic |
| TTCATGTGTCCAGAACTGGC+TGG | 0.607798 | 3_4:+67604973 | Msa0516160:intron |
| GATTTGTCAAAGATTGTGTG+TGG | 0.608670 | 3_4:+67605520 | Msa0516160:CDS |
| TAACTTGCCATACCTTTGTG+AGG | 0.609041 | 3_4:-67602289 | None:intergenic |
| GGAGGCAGACGTTGACGCGG+TGG | 0.611176 | 3_4:+67599445 | Msa0516160:five_prime_UTR |
| GGACGAAGAATCTGTTAGGA+AGG | 0.614608 | 3_4:+67600984 | Msa0516160:CDS |
| TATATCTCGTTGCCTGCAAG+TGG | 0.614918 | 3_4:+67600707 | Msa0516160:CDS |
| TCTCCAATAAGTCAATGAAG+TGG | 0.615738 | 3_4:-67604648 | None:intergenic |
| CAGCTTATGATGGAAATCCT+CGG | 0.622225 | 3_4:+67603731 | Msa0516160:CDS |
| GAATCCAATGTCAGAGACGA+AGG | 0.623030 | 3_4:-67605137 | None:intergenic |
| CTCGCCATCTTGGCCCACAA+AGG | 0.624193 | 3_4:-67604314 | None:intergenic |
| GTGGAACTTATGTGGACTCA+AGG | 0.624300 | 3_4:+67605539 | Msa0516160:CDS |
| TGATGGAAACTCCTTGAAAG+GGG | 0.625886 | 3_4:-67605362 | None:intergenic |
| TAATATGCAGTTCTTCACTA+CGG | 0.627898 | 3_4:+67600101 | Msa0516160:CDS |
| CATCTGATAATATCCATCGA+CGG | 0.629067 | 3_4:-67604342 | None:intergenic |
| GTTCAAATCATTCCTCACAA+AGG | 0.633223 | 3_4:+67602277 | Msa0516160:CDS |
| GTCTTGCCCATACAGAGTTG+AGG | 0.635746 | 3_4:+67601233 | Msa0516160:CDS |
| TGATGATTGCATTTGACATG+AGG | 0.640141 | 3_4:+67602110 | Msa0516160:CDS |
| GAATCCTCATCCAAAGCCAA+AGG | 0.640345 | 3_4:+67604675 | Msa0516160:CDS |
| GGCTATCAGAGGTTTGACAA+TGG | 0.644633 | 3_4:+67599934 | Msa0516160:intron |
| GTTGACGCGGTGGAAACCCG+TGG | 0.645850 | 3_4:+67599455 | Msa0516160:five_prime_UTR |
| TTTGCTATAGGCGGATGAGG+TGG | 0.651791 | 3_4:+67600351 | Msa0516160:intron |
| ATTCCGCCCTTCCGGCAATG+AGG | 0.652081 | 3_4:+67605294 | Msa0516160:CDS |
| AGTTGCGTGCTACAGAACGC+CGG | 0.653048 | 3_4:-67599488 | None:intergenic |
| GCCTATTGTATTGCACTGGG+AGG | 0.658776 | 3_4:+67605017 | Msa0516160:CDS |
| ACCATCCTCGCAAAAGTCAG+CGG | 0.660725 | 3_4:-67602047 | None:intergenic |
| ACTATACACTGATATTACAA+AGG | 0.661664 | 3_4:-67605907 | None:intergenic |
| CAAAGCTGGTAAAAGAGGAA+GGG | 0.663205 | 3_4:+67605192 | Msa0516160:CDS |
| GACCTCTTCCGTTTGCATGG+AGG | 0.665410 | 3_4:+67600171 | Msa0516160:CDS |
| TGCAGGCAAGAGAAAGCACA+AGG | 0.672647 | 3_4:+67600078 | Msa0516160:CDS |
| AGTTCCCAAGCTCAGCGTCG+AGG | 0.673683 | 3_4:+67600526 | Msa0516160:CDS |
| TCGATGGATATTATCAGATG+GGG | 0.674719 | 3_4:+67604345 | Msa0516160:CDS |
| TAGGGAGGCAGACGTTGACG+CGG | 0.678964 | 3_4:+67599442 | Msa0516160:five_prime_UTR |
| ACGGACAGGAGGTTGGCGAA+GGG | 0.679588 | 3_4:-67605053 | None:intergenic |
| CCAACTAGTACACGGACAGG+AGG | 0.684433 | 3_4:-67605064 | None:intergenic |
| GATTTCATACCCGTCCACCA+AGG | 0.686883 | 3_4:-67600261 | None:intergenic |
| GCAAATCTCCAACTAGTACA+CGG | 0.688715 | 3_4:-67605072 | None:intergenic |
| CAGATGCTTGATAGGAACTG+GGG | 0.692383 | 3_4:+67603884 | Msa0516160:intron |
| GATTGTCCAGCGAAACGCAG+GGG | 0.700725 | 3_4:-67600049 | None:intergenic |
| TGATTGTCCAGCGAAACGCA+GGG | 0.710536 | 3_4:-67600050 | None:intergenic |
| GCGGAATGAGAGCCTCTCTG+AGG | 0.711146 | 3_4:-67605278 | None:intergenic |
| TTCATTTATCCTAGTCCACG+GGG | 0.719519 | 3_4:+67600739 | Msa0516160:CDS |
| AGCAAGACAATACCTCAGAG+AGG | 0.731039 | 3_4:+67605266 | Msa0516160:CDS |
| CATATGGAGAGTTTCTGCCG+AGG | 0.733805 | 3_4:-67603748 | None:intergenic |
| GTAGGAGAAGACACAACTGG+AGG | 0.772677 | 3_4:+67601006 | Msa0516160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAAAAATAAAAAAAA+AGG | - | chr3_4:67599913-67599932 | None:intergenic | 0.0% |
| !!! | TTTTTTTTATTTTTAATATT+TGG | + | chr3_4:67599913-67599932 | Msa0516160:intron | 0.0% |
| !! | TTAAAAATAAAAAAAAAGGA+TGG | - | chr3_4:67599909-67599928 | None:intergenic | 10.0% |
| !!! | GTTAATATTGTATTTAATTT+TGG | + | chr3_4:67602308-67602327 | Msa0516160:intron | 10.0% |
| !!! | AAAATAAAATAATTTTGAGT+TGG | - | chr3_4:67602931-67602950 | None:intergenic | 10.0% |
| !!! | TGGATTAATTTTTTTAATTC+CGG | + | chr3_4:67600310-67600329 | Msa0516160:intron | 15.0% |
| !!! | TAAAAGTATAACTTTTTAGA+AGG | + | chr3_4:67602344-67602363 | Msa0516160:intron | 15.0% |
| !!! | TCATATTTAATTTATGTTTC+TGG | - | chr3_4:67602816-67602835 | None:intergenic | 15.0% |
| !!! | ATATTTTTGATGTTATCATA+AGG | + | chr3_4:67603014-67603033 | Msa0516160:intron | 15.0% |
| !!! | TATTTTTGATGTTATCATAA+GGG | + | chr3_4:67603015-67603034 | Msa0516160:intron | 15.0% |
| !! | TGAGAATAATACTAAATTAA+TGG | + | chr3_4:67603342-67603361 | Msa0516160:intron | 15.0% |
| !!! | TCATTATTTTATTACATTTC+CGG | + | chr3_4:67603444-67603463 | Msa0516160:intron | 15.0% |
| !! | AATATTTATTATGCTAATAC+CGG | - | chr3_4:67603466-67603485 | None:intergenic | 15.0% |
| !! | AAAAGTTATGAAAACAAAAA+TGG | - | chr3_4:67603842-67603861 | None:intergenic | 15.0% |
| !! | AAAAAAAATCATAAAGAGAA+GGG | + | chr3_4:67604106-67604125 | Msa0516160:intron | 15.0% |
| !! | AACATAATAAGAAAGAGAAT+AGG | + | chr3_4:67599412-67599431 | Msa0516160:five_prime_UTR | 20.0% |
| !! | AATTTATATGTGAATAAGCT+AGG | - | chr3_4:67600003-67600022 | None:intergenic | 20.0% |
| !!! | ATTAATTTTTTTAATTCCGG+TGG | + | chr3_4:67600313-67600332 | Msa0516160:intron | 20.0% |
| !! | AAGAATGATACAAAAGTTTA+CGG | - | chr3_4:67600667-67600686 | None:intergenic | 20.0% |
| !!! | ATTCATTACCTTGATATTTT+GGG | - | chr3_4:67601591-67601610 | None:intergenic | 20.0% |
| !!! | AATTCATTACCTTGATATTT+TGG | - | chr3_4:67601592-67601611 | None:intergenic | 20.0% |
| !!! | TTATACTTTTAAACAGTCAA+GGG | - | chr3_4:67602335-67602354 | None:intergenic | 20.0% |
| !! | GAAAAAGGAACAAATTATTT+AGG | - | chr3_4:67602466-67602485 | None:intergenic | 20.0% |
| !!! | CATTTTAGTGTTATTAATAG+CGG | + | chr3_4:67602511-67602530 | Msa0516160:intron | 20.0% |
| !! | AAAAATCTGATATGAGAAAT+AGG | + | chr3_4:67602557-67602576 | Msa0516160:intron | 20.0% |
| !! | AAAATCTGATATGAGAAATA+GGG | + | chr3_4:67602558-67602577 | Msa0516160:intron | 20.0% |
| !! | ATATATAAACCATCTTACAA+GGG | - | chr3_4:67602783-67602802 | None:intergenic | 20.0% |
| !! | TATATATAAACCATCTTACA+AGG | - | chr3_4:67602784-67602803 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATGATAA+TGG | - | chr3_4:67603296-67603315 | None:intergenic | 20.0% |
| !! | GGAAATGTAATAAAATAATG+AGG | - | chr3_4:67603445-67603464 | None:intergenic | 20.0% |
| !!! | CTATGATTATCTTTTAGTAT+TGG | - | chr3_4:67603559-67603578 | None:intergenic | 20.0% |
| !! | CAAAAAAAATCATAAAGAGA+AGG | + | chr3_4:67604105-67604124 | Msa0516160:intron | 20.0% |
| !! | CAAATGTAACCTTATTATTA+AGG | - | chr3_4:67604541-67604560 | None:intergenic | 20.0% |
| !!! | ATTAAAATTTGTGACTGTTT+TGG | - | chr3_4:67604923-67604942 | None:intergenic | 20.0% |
| !!! | GTATCAATGTTTTTATCTAA+AGG | - | chr3_4:67605448-67605467 | None:intergenic | 20.0% |
| !! | TTGACAAATCAAATATTTCA+GGG | - | chr3_4:67605510-67605529 | None:intergenic | 20.0% |
| !! | TTTGACAAATCAAATATTTC+AGG | - | chr3_4:67605511-67605530 | None:intergenic | 20.0% |
| ! | AAAGAGAATAGGAGATATTT+AGG | + | chr3_4:67599423-67599442 | Msa0516160:five_prime_UTR | 25.0% |
| ! | AAGAGAATAGGAGATATTTA+GGG | + | chr3_4:67599424-67599443 | Msa0516160:five_prime_UTR | 25.0% |
| ! | TGAATAATATAGGAAGAAGA+AGG | - | chr3_4:67599529-67599548 | None:intergenic | 25.0% |
| !!! | ATGGAGTTGATGAATAATAT+AGG | - | chr3_4:67599539-67599558 | None:intergenic | 25.0% |
| ! | TATCAGAAATGTTAATTCCT+TGG | - | chr3_4:67599676-67599695 | None:intergenic | 25.0% |
| ! | TACTGCAAAACTAAATGTAA+AGG | - | chr3_4:67599850-67599869 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTTGCAGTATTGA+TGG | + | chr3_4:67599854-67599873 | Msa0516160:intron | 25.0% |
| ! | ATTTATCAGCAAATATTCAG+AGG | - | chr3_4:67599882-67599901 | None:intergenic | 25.0% |
| !! | TTTTAATATTTGGCTATCAG+AGG | + | chr3_4:67599923-67599942 | Msa0516160:intron | 25.0% |
| ! | TAACTCTTGTGTTATACAAA+GGG | - | chr3_4:67600489-67600508 | None:intergenic | 25.0% |
| ! | ATAACTCTTGTGTTATACAA+AGG | - | chr3_4:67600490-67600509 | None:intergenic | 25.0% |
| ! | CAACAAAATATTGTGAAAAG+GGG | - | chr3_4:67600613-67600632 | None:intergenic | 25.0% |
| ! | CCAACAAAATATTGTGAAAA+GGG | - | chr3_4:67600614-67600633 | None:intergenic | 25.0% |
| ! | ACCAACAAAATATTGTGAAA+AGG | - | chr3_4:67600615-67600634 | None:intergenic | 25.0% |
| !! | ATATTTTGTTGGTATCTTCA+AGG | + | chr3_4:67600622-67600641 | Msa0516160:intron | 25.0% |
| !!! | GTTTTAACCTTAATGTTTTC+TGG | + | chr3_4:67601104-67601123 | Msa0516160:intron | 25.0% |
| ! | ACAATGGTTTATTTACTTTC+AGG | + | chr3_4:67601189-67601208 | Msa0516160:intron | 25.0% |
| !!! | TCATTTTTCTGTCTTTTATG+TGG | + | chr3_4:67601340-67601359 | Msa0516160:intron | 25.0% |
| ! | GAAAAGAATTATTACAGAGA+TGG | + | chr3_4:67601612-67601631 | Msa0516160:intron | 25.0% |
| ! | TTATTCAGTTAGAAACCATA+TGG | - | chr3_4:67601700-67601719 | None:intergenic | 25.0% |
| ! | ATATGTCATATGTTAGGTAT+CGG | - | chr3_4:67601846-67601865 | None:intergenic | 25.0% |
| !! | GAAAGTATATGTCATATGTT+AGG | - | chr3_4:67601852-67601871 | None:intergenic | 25.0% |
| ! | AACATATGACATATACTTTC+TGG | + | chr3_4:67601852-67601871 | Msa0516160:intron | 25.0% |
| ! | TATAATGGCAAAAATGGTAA+TGG | + | chr3_4:67602223-67602242 | Msa0516160:CDS | 25.0% |
| ! | ATAATGGCAAAAATGGTAAT+GGG | + | chr3_4:67602224-67602243 | Msa0516160:CDS | 25.0% |
| !! | TATACTTTTAAACAGTCAAG+GGG | - | chr3_4:67602334-67602353 | None:intergenic | 25.0% |
| !! | GTTATACTTTTAAACAGTCA+AGG | - | chr3_4:67602336-67602355 | None:intergenic | 25.0% |
| !! | AGCGATTATTTCTTACATAT+CGG | - | chr3_4:67603063-67603082 | None:intergenic | 25.0% |
| !!! | ATGAAGTGTTGTTAAATAAC+CGG | - | chr3_4:67603256-67603275 | None:intergenic | 25.0% |
| ! | ATTCTAACAAATATGTAGAC+AGG | + | chr3_4:67603609-67603628 | Msa0516160:intron | 25.0% |
| ! | ATCTGCGAGAAAATAATATA+AGG | - | chr3_4:67603869-67603888 | None:intergenic | 25.0% |
| ! | TTGCTAGCAATAAAGATAAA+AGG | - | chr3_4:67603922-67603941 | None:intergenic | 25.0% |
| ! | ATCTAATCAAATGCTATTCA+TGG | - | chr3_4:67604203-67604222 | None:intergenic | 25.0% |
| ! | TATTATTAAGGAAAAACTCG+AGG | - | chr3_4:67604529-67604548 | None:intergenic | 25.0% |
| !! | CGAGTTTTTCCTTAATAATA+AGG | + | chr3_4:67604529-67604548 | Msa0516160:intron | 25.0% |
| !! | TTTTACTCATGAATTACCTT+TGG | - | chr3_4:67604694-67604713 | None:intergenic | 25.0% |
| ! | ATTGTAGAAGAAACAATACT+AGG | - | chr3_4:67604735-67604754 | None:intergenic | 25.0% |
| !!! | GTTTTGGTGATTGTTTTAAT+TGG | - | chr3_4:67604907-67604926 | None:intergenic | 25.0% |
| ! | ATGAATAATGGCATATAAGT+TGG | - | chr3_4:67604958-67604977 | None:intergenic | 25.0% |
| !!! | AGAAATTTTCTAGCAAGAAA+TGG | + | chr3_4:67605329-67605348 | Msa0516160:CDS | 25.0% |
| ! | TGACAAATCAAATATTTCAG+GGG | - | chr3_4:67605509-67605528 | None:intergenic | 25.0% |
| ! | TTTTCATTTCAATTTCGCCA+AGG | + | chr3_4:67599656-67599675 | Msa0516160:intron | 30.0% |
| ATTTACATTCACCACATCAA+TGG | - | chr3_4:67599751-67599770 | None:intergenic | 30.0% | |
| CACATATAAATTTGTCGACA+AGG | + | chr3_4:67600011-67600030 | Msa0516160:CDS | 30.0% | |
| TAATATGCAGTTCTTCACTA+CGG | + | chr3_4:67600101-67600120 | Msa0516160:CDS | 30.0% | |
| GTTCAAAATGTCAGACTTTA+AGG | + | chr3_4:67600216-67600235 | Msa0516160:CDS | 30.0% | |
| !! | CATCGATTAAGTTTTGCTAT+AGG | + | chr3_4:67600339-67600358 | Msa0516160:intron | 30.0% |
| ! | CCCTTTTCACAATATTTTGT+TGG | + | chr3_4:67600611-67600630 | Msa0516160:intron | 30.0% |
| ! | AGTGGTTCTTTTTATGCAAA+GGG | - | chr3_4:67600852-67600871 | None:intergenic | 30.0% |
| ! | ACATTTTCCTTTCAGTATCA+TGG | + | chr3_4:67600892-67600911 | Msa0516160:intron | 30.0% |
| TTGATGAGAGATCTTCTAAT+TGG | + | chr3_4:67601066-67601085 | Msa0516160:CDS | 30.0% | |
| ATGTCTTCCAGAAAACATTA+AGG | - | chr3_4:67601114-67601133 | None:intergenic | 30.0% | |
| ! | AGGAGTGATATTTTCTACAA+TGG | + | chr3_4:67601173-67601192 | Msa0516160:intron | 30.0% |
| CTTTGATATGTCTGTCTATT+GGG | - | chr3_4:67601279-67601298 | None:intergenic | 30.0% | |
| ACTTTGATATGTCTGTCTAT+TGG | - | chr3_4:67601280-67601299 | None:intergenic | 30.0% | |
| ! | TGTTGCTAGTTTGAACATTT+CGG | + | chr3_4:67601459-67601478 | Msa0516160:intron | 30.0% |
| ! | CTTATCAGGTTTTCTATCTT+AGG | - | chr3_4:67601512-67601531 | None:intergenic | 30.0% |
| TGATAGAACCCAAAATATCA+AGG | + | chr3_4:67601580-67601599 | Msa0516160:intron | 30.0% | |
| AGTTAGAAACCATATGGTTT+GGG | - | chr3_4:67601694-67601713 | None:intergenic | 30.0% | |
| GGAAAATGACAGTTATATGA+AGG | - | chr3_4:67601754-67601773 | None:intergenic | 30.0% | |
| !! | GTTTGTTATATTTGCTGATG+TGG | - | chr3_4:67601790-67601809 | None:intergenic | 30.0% |
| ! | AACTCTATTTAGCACCTTTT+TGG | + | chr3_4:67601807-67601826 | Msa0516160:intron | 30.0% |
| ! | ACTCTATTTAGCACCTTTTT+GGG | + | chr3_4:67601808-67601827 | Msa0516160:intron | 30.0% |
| TATGTCATATGTTAGGTATC+GGG | - | chr3_4:67601845-67601864 | None:intergenic | 30.0% | |
| !! | AAGATGCATGGGTTTTATAA+TGG | + | chr3_4:67602208-67602227 | Msa0516160:intron | 30.0% |
| !! | GGGTTTTATAATGGCAAAAA+TGG | + | chr3_4:67602217-67602236 | Msa0516160:CDS | 30.0% |
| TTGAACTTTGCGAATATCAA+AGG | - | chr3_4:67602263-67602282 | None:intergenic | 30.0% | |
| AATATGCCTCATACAAACTA+AGG | + | chr3_4:67602440-67602459 | Msa0516160:intron | 30.0% | |
| TATTTATTTCAACCGCTTTG+TGG | - | chr3_4:67602611-67602630 | None:intergenic | 30.0% | |
| ! | CTAATTAACCTCTAACTTGT+AGG | - | chr3_4:67602688-67602707 | None:intergenic | 30.0% |
| !!! | ATAATTTTGAGTTGGTGATG+AGG | - | chr3_4:67602923-67602942 | None:intergenic | 30.0% |
| GCGAAATCACAATAACATAT+CGG | + | chr3_4:67603122-67603141 | Msa0516160:intron | 30.0% | |
| AACAACACTTCATTTATAGC+AGG | + | chr3_4:67603263-67603282 | Msa0516160:intron | 30.0% | |
| AAATTAATGGTTAAGTCACG+TGG | + | chr3_4:67603355-67603374 | Msa0516160:intron | 30.0% | |
| AAGTAAACTACTACAGATCA+TGG | - | chr3_4:67603381-67603400 | None:intergenic | 30.0% | |
| ATGATCTGTAGTAGTTTACT+TGG | + | chr3_4:67603380-67603399 | Msa0516160:intron | 30.0% | |
| TGATCTGTAGTAGTTTACTT+GGG | + | chr3_4:67603381-67603400 | Msa0516160:intron | 30.0% | |
| CTGATAATTCAAATTACACG+TGG | + | chr3_4:67603500-67603519 | Msa0516160:intron | 30.0% | |
| GAAACAAGTCACGATATATA+AGG | + | chr3_4:67603522-67603541 | Msa0516160:intron | 30.0% | |
| ATAGTTACCCTAACAAATGT+AGG | + | chr3_4:67603575-67603594 | Msa0516160:intron | 30.0% | |
| ! | CAACATACCTACATTTGTTA+GGG | - | chr3_4:67603585-67603604 | None:intergenic | 30.0% |
| TCAACATACCTACATTTGTT+AGG | - | chr3_4:67603586-67603605 | None:intergenic | 30.0% | |
| AAGATAAACAGCTCAATGTA+GGG | - | chr3_4:67604024-67604043 | None:intergenic | 30.0% | |
| !! | ACCAGCAATTTTTCAATCTT+GGG | - | chr3_4:67604242-67604261 | None:intergenic | 30.0% |
| TGAAATGTTCTACAGTTGTT+TGG | + | chr3_4:67604272-67604291 | Msa0516160:intron | 30.0% | |
| AAATGTCTTATATAAGCACC+AGG | - | chr3_4:67604481-67604500 | None:intergenic | 30.0% | |
| AAGTTCACAATTAATCCAAC+TGG | + | chr3_4:67604881-67604900 | Msa0516160:intron | 30.0% | |
| TAGTAGAGAATCAAAGTTGA+AGG | + | chr3_4:67605105-67605124 | Msa0516160:CDS | 30.0% | |
| TCTTCATTTATACTAAGAGC+TGG | + | chr3_4:67605226-67605245 | Msa0516160:CDS | 30.0% | |
| CTTCATTTATACTAAGAGCT+GGG | + | chr3_4:67605227-67605246 | Msa0516160:CDS | 30.0% | |
| GACAAATCAAATATTTCAGG+GGG | - | chr3_4:67605508-67605527 | None:intergenic | 30.0% | |
| !!! | TGTAGTTTTGTTGTTGCTAT+AGG | + | chr3_4:67605706-67605725 | Msa0516160:three_prime_UTR | 30.0% |
| GCATTTCAGATAACTAAGTT+TGG | - | chr3_4:67605782-67605801 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAAGAAGTCTGTTC+TGG | + | chr3_4:67605802-67605821 | Msa0516160:three_prime_UTR | 30.0% |
| AGAATAGGAGATATTTAGGG+AGG | + | chr3_4:67599427-67599446 | Msa0516160:five_prime_UTR | 35.0% | |
| !! | GTTTTAGATCGTGTTAGCAT+TGG | + | chr3_4:67600238-67600257 | Msa0516160:CDS | 35.0% |
| !! | CGATTAAGTTTTGCTATAGG+CGG | + | chr3_4:67600342-67600361 | Msa0516160:intron | 35.0% |
| AGATAATTCTTTGTCCGTTC+AGG | + | chr3_4:67600408-67600427 | Msa0516160:intron | 35.0% | |
| AACTCATCATGTAACCTGAA+CGG | - | chr3_4:67600425-67600444 | None:intergenic | 35.0% | |
| !! | TTCAAGGTATTGAAGAAGCT+GGG | + | chr3_4:67600638-67600657 | Msa0516160:intron | 35.0% |
| TCTTACTCAATGCAAGTTCA+TGG | + | chr3_4:67600683-67600702 | Msa0516160:CDS | 35.0% | |
| AAATAGACAACATTCAGAGC+AGG | - | chr3_4:67600817-67600836 | None:intergenic | 35.0% | |
| ! | GTGGTTCTTTTTATGCAAAG+GGG | - | chr3_4:67600851-67600870 | None:intergenic | 35.0% |
| ! | CAGTGGTTCTTTTTATGCAA+AGG | - | chr3_4:67600853-67600872 | None:intergenic | 35.0% |
| ! | AGAACCACTGATGTTCTTTT+TGG | + | chr3_4:67600863-67600882 | Msa0516160:intron | 35.0% |
| AAAACTGCCATGATACTGAA+AGG | - | chr3_4:67600902-67600921 | None:intergenic | 35.0% | |
| !! | AGATTGGCTTCAAACTTTAG+AGG | + | chr3_4:67600948-67600967 | Msa0516160:CDS | 35.0% |
| GTTAATTACCTGCATAGTCA+TGG | + | chr3_4:67601211-67601230 | Msa0516160:CDS | 35.0% | |
| TGATGTACAAAACCTTCTCT+GGG | - | chr3_4:67601394-67601413 | None:intergenic | 35.0% | |
| !!! | ACTTTTGCTCTGGGATTATA+GGG | - | chr3_4:67601642-67601661 | None:intergenic | 35.0% |
| !!! | AACTTTTGCTCTGGGATTAT+AGG | - | chr3_4:67601643-67601662 | None:intergenic | 35.0% |
| AGAGAAATGTCTCTTCTCTA+AGG | - | chr3_4:67601666-67601685 | None:intergenic | 35.0% | |
| CAGTTAGAAACCATATGGTT+TGG | - | chr3_4:67601695-67601714 | None:intergenic | 35.0% | |
| ATGACAGTTATATGAAGGAC+AGG | - | chr3_4:67601749-67601768 | None:intergenic | 35.0% | |
| !!! | TTCTGGTTGATGATTTTCAC+TGG | + | chr3_4:67601869-67601888 | Msa0516160:intron | 35.0% |
| !!! | TCTGGTTGATGATTTTCACT+GGG | + | chr3_4:67601870-67601889 | Msa0516160:intron | 35.0% |
| AGTTACTGTACACCAATAGT+TGG | + | chr3_4:67601934-67601953 | Msa0516160:intron | 35.0% | |
| ! | ACCTGAAGTGTTTACTTAAC+AGG | + | chr3_4:67602006-67602025 | Msa0516160:intron | 35.0% |
| ACCTGTTAAGTAAACACTTC+AGG | - | chr3_4:67602010-67602029 | None:intergenic | 35.0% | |
| ! | GAAGTGTTTACTTAACAGGT+CGG | + | chr3_4:67602010-67602029 | Msa0516160:intron | 35.0% |
| TGATGATTGCATTTGACATG+AGG | + | chr3_4:67602110-67602129 | Msa0516160:CDS | 35.0% | |
| ATTGCATTTGACATGAGGTA+TGG | + | chr3_4:67602115-67602134 | Msa0516160:intron | 35.0% | |
| ATCTGTGTTACAAAGATGCA+TGG | + | chr3_4:67602196-67602215 | Msa0516160:intron | 35.0% | |
| TCTGTGTTACAAAGATGCAT+GGG | + | chr3_4:67602197-67602216 | Msa0516160:intron | 35.0% | |
| GTTCAAATCATTCCTCACAA+AGG | + | chr3_4:67602277-67602296 | Msa0516160:CDS | 35.0% | |
| AATCATTCCTCACAAAGGTA+TGG | + | chr3_4:67602282-67602301 | Msa0516160:intron | 35.0% | |
| ! | GTCTATAAAGCATTTGAGTC+AGG | - | chr3_4:67602384-67602403 | None:intergenic | 35.0% |
| AAATGCTTTATAGACCGTGA+AGG | + | chr3_4:67602389-67602408 | Msa0516160:intron | 35.0% | |
| !! | TTTAGGCCTTAGTTTGTATG+AGG | - | chr3_4:67602449-67602468 | None:intergenic | 35.0% |
| !! | TCTAACTTGTAGGCTTTTGA+GGG | - | chr3_4:67602678-67602697 | None:intergenic | 35.0% |
| CAAGTTAGAGGTTAATTAGC+AGG | + | chr3_4:67602689-67602708 | Msa0516160:intron | 35.0% | |
| AACCGATTGTCTTAGATGTA+AGG | + | chr3_4:67602752-67602771 | Msa0516160:intron | 35.0% | |
| ACCGATTGTCTTAGATGTAA+GGG | + | chr3_4:67602753-67602772 | Msa0516160:intron | 35.0% | |
| ! | ACCCTTACATCTAAGACAAT+CGG | - | chr3_4:67602757-67602776 | None:intergenic | 35.0% |
| GAAGTGAAGAGAAAAGATAG+AGG | + | chr3_4:67602841-67602860 | Msa0516160:intron | 35.0% | |
| TTTATATAACCCCACAACCT+AGG | - | chr3_4:67602894-67602913 | None:intergenic | 35.0% | |
| ! | AGCAGTGACTTTTTGCATAT+CGG | - | chr3_4:67603090-67603109 | None:intergenic | 35.0% |
| CAAATTCCGAGATGTAATAG+CGG | + | chr3_4:67603215-67603234 | Msa0516160:intron | 35.0% | |
| ATTTGTAGGTCTACTGTAAG+TGG | + | chr3_4:67603411-67603430 | Msa0516160:intron | 35.0% | |
| TTCTTGCCACATTAAACTTC+AGG | + | chr3_4:67603685-67603704 | Msa0516160:intron | 35.0% | |
| TCTTGCCACATTAAACTTCA+GGG | + | chr3_4:67603686-67603705 | Msa0516160:intron | 35.0% | |
| AGATAAACAGCTCAATGTAG+GGG | - | chr3_4:67604023-67604042 | None:intergenic | 35.0% | |
| CAAGATAAACAGCTCAATGT+AGG | - | chr3_4:67604025-67604044 | None:intergenic | 35.0% | |
| CTACATTGAGCTGTTTATCT+TGG | + | chr3_4:67604023-67604042 | Msa0516160:intron | 35.0% | |
| ! | TCAAGTTTCTTTGGTCTTTC+AGG | + | chr3_4:67604130-67604149 | Msa0516160:intron | 35.0% |
| ACCCAAGATTGAAAAATTGC+TGG | + | chr3_4:67604238-67604257 | Msa0516160:intron | 35.0% | |
| !! | CACCAGCAATTTTTCAATCT+TGG | - | chr3_4:67604243-67604262 | None:intergenic | 35.0% |
| CAACTGTAGAACATTTCACA+TGG | - | chr3_4:67604270-67604289 | None:intergenic | 35.0% | |
| ATCTGATAATATCCATCGAC+GGG | - | chr3_4:67604344-67604363 | None:intergenic | 35.0% | |
| CATCTGATAATATCCATCGA+CGG | - | chr3_4:67604345-67604364 | None:intergenic | 35.0% | |
| GTCGATGGATATTATCAGAT+GGG | + | chr3_4:67604344-67604363 | Msa0516160:CDS | 35.0% | |
| TCGATGGATATTATCAGATG+GGG | + | chr3_4:67604345-67604364 | Msa0516160:CDS | 35.0% | |
| !! | TCTGTTACATTTTGAGTACC+TGG | + | chr3_4:67604460-67604479 | Msa0516160:intron | 35.0% |
| !!! | TTTCTATGTTTTAGCGCAGT+AGG | + | chr3_4:67604620-67604639 | Msa0516160:intron | 35.0% |
| CTCCAATAAGTCAATGAAGT+GGG | - | chr3_4:67604650-67604669 | None:intergenic | 35.0% | |
| TCTCCAATAAGTCAATGAAG+TGG | - | chr3_4:67604651-67604670 | None:intergenic | 35.0% | |
| ! | TCATGAATTACCTTTGGCTT+TGG | - | chr3_4:67604688-67604707 | None:intergenic | 35.0% |
| AAAGAATGGTTTAGGCTCTT+GGG | - | chr3_4:67604812-67604831 | None:intergenic | 35.0% | |
| !!! | GATTGTTTTAATTGGCCAGT+TGG | - | chr3_4:67604899-67604918 | None:intergenic | 35.0% |
| !! | AGTTCTGGACACATGAATAA+TGG | - | chr3_4:67604970-67604989 | None:intergenic | 35.0% |
| ATTATTCATGTGTCCAGAAC+TGG | + | chr3_4:67604969-67604988 | Msa0516160:intron | 35.0% | |
| ATTGGATTCTCAGTCATGAT+TGG | + | chr3_4:67605151-67605170 | Msa0516160:CDS | 35.0% | |
| GAGAAAAATAACCCCTTTCA+AGG | + | chr3_4:67605351-67605370 | Msa0516160:CDS | 35.0% | |
| TTGATGGAAACTCCTTGAAA+GGG | - | chr3_4:67605366-67605385 | None:intergenic | 35.0% | |
| GATTTGTCAAAGATTGTGTG+TGG | + | chr3_4:67605520-67605539 | Msa0516160:CDS | 35.0% | |
| CCACAAAAGACCTTGTAAAT+AGG | - | chr3_4:67605600-67605619 | None:intergenic | 35.0% | |
| ! | CCTATTTACAAGGTCTTTTG+TGG | + | chr3_4:67605597-67605616 | Msa0516160:CDS | 35.0% |
| ! | ATTTACATGAAAGTGTGCTC+TGG | - | chr3_4:67605740-67605759 | None:intergenic | 35.0% |
| !!! | GGAACTGTAGGCATTTTTTT+TGG | + | chr3_4:67605828-67605847 | Msa0516160:three_prime_UTR | 35.0% |
| !!! | CTGTAGGCATTTTTTTTGGA+TGG | + | chr3_4:67605832-67605851 | Msa0516160:three_prime_UTR | 35.0% |
| !! | GAAGAGTATTGGATGGAACA+TGG | - | chr3_4:67599558-67599577 | None:intergenic | 40.0% |
| !! | AAGGGAAGAAGAGTATTGGA+TGG | - | chr3_4:67599565-67599584 | None:intergenic | 40.0% |
| ! | GAGAAAGGGAAGAAGAGTAT+TGG | - | chr3_4:67599569-67599588 | None:intergenic | 40.0% |
| TCTTCTTCCCTTTCTCATTC+TGG | + | chr3_4:67599573-67599592 | Msa0516160:five_prime_UTR | 40.0% | |
| ACCAGAACCAGAATGAGAAA+GGG | - | chr3_4:67599583-67599602 | None:intergenic | 40.0% | |
| ACAATGGCACTTTGTAGAAC+TGG | + | chr3_4:67599950-67599969 | Msa0516160:exon | 40.0% | |
| CAATGGCACTTTGTAGAACT+GGG | + | chr3_4:67599951-67599970 | Msa0516160:exon | 40.0% | |
| TTACTCTCCAAAATCCGGTA+TGG | - | chr3_4:67599977-67599996 | None:intergenic | 40.0% | |
| GGACATTACTCTCCAAAATC+CGG | - | chr3_4:67599982-67600001 | None:intergenic | 40.0% | |
| ATCTGCATCTGCTTCTTCAA+TGG | + | chr3_4:67600126-67600145 | Msa0516160:CDS | 40.0% | |
| AGGAAACGGATCATGTTATG+AGG | + | chr3_4:67600194-67600213 | Msa0516160:CDS | 40.0% | |
| ACTTTACGATGTGTCATGAC+TGG | + | chr3_4:67600290-67600309 | Msa0516160:intron | 40.0% | |
| AACTTAATCGATGAGACCAC+CGG | - | chr3_4:67600332-67600351 | None:intergenic | 40.0% | |
| !! | CTTCAAGGTATTGAAGAAGC+TGG | + | chr3_4:67600637-67600656 | Msa0516160:intron | 40.0% |
| GGTTCATTTATCCTAGTCCA+CGG | + | chr3_4:67600737-67600756 | Msa0516160:CDS | 40.0% | |
| GTTCATTTATCCTAGTCCAC+GGG | + | chr3_4:67600738-67600757 | Msa0516160:CDS | 40.0% | |
| TTCATTTATCCTAGTCCACG+GGG | + | chr3_4:67600739-67600758 | Msa0516160:CDS | 40.0% | |
| TGAGCCAAAAAGAACATCAG+TGG | - | chr3_4:67600870-67600889 | None:intergenic | 40.0% | |
| !!! | GCAGTTTTTCTTTGAGACAC+TGG | + | chr3_4:67600914-67600933 | Msa0516160:CDS | 40.0% |
| GAAGAATCTGTTAGGAAGGT+AGG | + | chr3_4:67600988-67601007 | Msa0516160:CDS | 40.0% | |
| TCGCAATTGCCTAGAAATTG+CGG | - | chr3_4:67601034-67601053 | None:intergenic | 40.0% | |
| TGCAAGTATTCAAGCACTTG+TGG | - | chr3_4:67601143-67601162 | None:intergenic | 40.0% | |
| AATACTTGCACAGCAACATG+AGG | + | chr3_4:67601153-67601172 | Msa0516160:intron | 40.0% | |
| ! | TCTGTCTTTTATGTGGAGTG+TGG | + | chr3_4:67601347-67601366 | Msa0516160:intron | 40.0% |
| GTGATGTACAAAACCTTCTC+TGG | - | chr3_4:67601395-67601414 | None:intergenic | 40.0% | |
| AGTCTGTTGCACTTCTTATC+AGG | - | chr3_4:67601526-67601545 | None:intergenic | 40.0% | |
| ! | TAAGAAGTGCAACAGACTGT+AGG | + | chr3_4:67601528-67601547 | Msa0516160:intron | 40.0% |
| !! | CTCTAAGGAACTTTTGCTCT+GGG | - | chr3_4:67601651-67601670 | None:intergenic | 40.0% |
| !! | TCTCTAAGGAACTTTTGCTC+TGG | - | chr3_4:67601652-67601671 | None:intergenic | 40.0% |
| !! | TTTAGCACCTTTTTGGGCTT+AGG | + | chr3_4:67601814-67601833 | Msa0516160:intron | 40.0% |
| CATGAGGAAACACCAACTAT+TGG | - | chr3_4:67601949-67601968 | None:intergenic | 40.0% | |
| TCAACCTTTCTTCTCATGCT+TGG | + | chr3_4:67601979-67601998 | Msa0516160:intron | 40.0% | |
| CAAACCAAGCATGAGAAGAA+AGG | - | chr3_4:67601986-67602005 | None:intergenic | 40.0% | |
| TGGTTCAAATAGAGGCTCTA+TGG | + | chr3_4:67602066-67602085 | Msa0516160:CDS | 40.0% | |
| TAGAGGCTCTATGGAAAACA+TGG | + | chr3_4:67602075-67602094 | Msa0516160:CDS | 40.0% | |
| AACTTCACAAACGATATCCG+AGG | - | chr3_4:67602141-67602160 | None:intergenic | 40.0% | |
| !! | AATGGTAATGGGAGAGCTTA+TGG | + | chr3_4:67602235-67602254 | Msa0516160:CDS | 40.0% |
| ! | TAACTTGCCATACCTTTGTG+AGG | - | chr3_4:67602292-67602311 | None:intergenic | 40.0% |
| GAGGCATATTAGAGACAAGA+AGG | - | chr3_4:67602430-67602449 | None:intergenic | 40.0% | |
| TACTCACAGCTTACAGCAAA+GGG | - | chr3_4:67602489-67602508 | None:intergenic | 40.0% | |
| ATACTCACAGCTTACAGCAA+AGG | - | chr3_4:67602490-67602509 | None:intergenic | 40.0% | |
| !! | GTGTTATTAATAGCGGATCG+CGG | + | chr3_4:67602518-67602537 | Msa0516160:intron | 40.0% |
| AAATAGCAGTAGCCACAAAG+CGG | + | chr3_4:67602596-67602615 | Msa0516160:intron | 40.0% | |
| !! | CTCTAACTTGTAGGCTTTTG+AGG | - | chr3_4:67602679-67602698 | None:intergenic | 40.0% |
| CTCAAAAGCCTACAAGTTAG+AGG | + | chr3_4:67602677-67602696 | Msa0516160:intron | 40.0% | |
| AAGAGAAAAGATAGAGGCAG+AGG | + | chr3_4:67602847-67602866 | Msa0516160:intron | 40.0% | |
| TTAGTGATGAGAGGTTACCT+AGG | + | chr3_4:67602874-67602893 | Msa0516160:intron | 40.0% | |
| AAAAGTCACTGCTATTGCAG+TGG | + | chr3_4:67603097-67603116 | Msa0516160:intron | 40.0% | |
| CAAATCCCGAGATGTAATAG+CGG | + | chr3_4:67603163-67603182 | Msa0516160:intron | 40.0% | |
| CTATACCGCTATTACATCTC+GGG | - | chr3_4:67603171-67603190 | None:intergenic | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3_4:67603172-67603191 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3_4:67603170-67603189 | Msa0516160:intron | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3_4:67603171-67603190 | Msa0516160:intron | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3_4:67603172-67603191 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3_4:67603170-67603189 | Msa0516160:intron | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3_4:67603171-67603190 | Msa0516160:intron | 40.0% | |
| GGTGTACTTCAAACGTAAGT+CGG | + | chr3_4:67603630-67603649 | Msa0516160:intron | 40.0% | |
| GTGTACTTCAAACGTAAGTC+GGG | + | chr3_4:67603631-67603650 | Msa0516160:intron | 40.0% | |
| CTTGCCACATTAAACTTCAG+GGG | + | chr3_4:67603687-67603706 | Msa0516160:intron | 40.0% | |
| CATTCCCCTGAAGTTTAATG+TGG | - | chr3_4:67603694-67603713 | None:intergenic | 40.0% | |
| ATAAGCTGTCGCAAACATGA+AGG | - | chr3_4:67603719-67603738 | None:intergenic | 40.0% | |
| ATGTTTGCGACAGCTTATGA+TGG | + | chr3_4:67603721-67603740 | Msa0516160:CDS | 40.0% | |
| ! | CAGCTTATGATGGAAATCCT+CGG | + | chr3_4:67603731-67603750 | Msa0516160:CDS | 40.0% |
| AACTCTCCATATGGAAATGC+TGG | + | chr3_4:67603758-67603777 | Msa0516160:CDS | 40.0% | |
| TGTAAGCCAGCATTTCCATA+TGG | - | chr3_4:67603767-67603786 | None:intergenic | 40.0% | |
| ! | TTTTCTCGCAGATGCTTGAT+AGG | + | chr3_4:67603876-67603895 | Msa0516160:intron | 40.0% |
| ! | GAGAAGGGTTCAAGTTTCTT+TGG | + | chr3_4:67604121-67604140 | Msa0516160:intron | 40.0% |
| ! | AGTTTCTTTGGTCTTTCAGG+AGG | + | chr3_4:67604133-67604152 | Msa0516160:intron | 40.0% |
| ACAGTTGTTTGGATGCTCTA+AGG | + | chr3_4:67604283-67604302 | Msa0516160:intron | 40.0% | |
| CGTCGATGGATATTATCAGA+TGG | + | chr3_4:67604343-67604362 | Msa0516160:CDS | 40.0% | |
| GATATTATCAGATGGGGTCT+AGG | + | chr3_4:67604351-67604370 | Msa0516160:CDS | 40.0% | |
| TGTCCTTAGATGAATACCTG+AGG | - | chr3_4:67604420-67604439 | None:intergenic | 40.0% | |
| CAGAAACACATTGCGTGTAT+GGG | - | chr3_4:67604444-67604463 | None:intergenic | 40.0% | |
| ACAGAAACACATTGCGTGTA+TGG | - | chr3_4:67604445-67604464 | None:intergenic | 40.0% | |
| !! | TGCCCACTTCATTGACTTAT+TGG | + | chr3_4:67604645-67604664 | Msa0516160:CDS | 40.0% |
| !! | ATTACCTTTGGCTTTGGATG+AGG | - | chr3_4:67604682-67604701 | None:intergenic | 40.0% |
| GAAAGAATGGTTTAGGCTCT+TGG | - | chr3_4:67604813-67604832 | None:intergenic | 40.0% | |
| AGCCTAAACCATTCTTTCCA+TGG | + | chr3_4:67604815-67604834 | Msa0516160:intron | 40.0% | |
| AGCCATGGAAAGAATGGTTT+AGG | - | chr3_4:67604820-67604839 | None:intergenic | 40.0% | |
| ATTGACAGCCATGGAAAGAA+TGG | - | chr3_4:67604826-67604845 | None:intergenic | 40.0% | |
| GCAAATCTCCAACTAGTACA+CGG | - | chr3_4:67605075-67605094 | None:intergenic | 40.0% | |
| ! | ATTCTCAGTCATGATTGGTC+AGG | + | chr3_4:67605156-67605175 | Msa0516160:CDS | 40.0% |
| !! | CTTTTACCAGCTTTGTCATG+AGG | - | chr3_4:67605187-67605206 | None:intergenic | 40.0% |
| CATGACAAAGCTGGTAAAAG+AGG | + | chr3_4:67605187-67605206 | Msa0516160:CDS | 40.0% | |
| ACAAAGCTGGTAAAAGAGGA+AGG | + | chr3_4:67605191-67605210 | Msa0516160:CDS | 40.0% | |
| CAAAGCTGGTAAAAGAGGAA+GGG | + | chr3_4:67605192-67605211 | Msa0516160:CDS | 40.0% | |
| TTATACTAAGAGCTGGGAGA+CGG | + | chr3_4:67605233-67605252 | Msa0516160:CDS | 40.0% | |
| TGATGGAAACTCCTTGAAAG+GGG | - | chr3_4:67605365-67605384 | None:intergenic | 40.0% | |
| CTTGATGGAAACTCCTTGAA+AGG | - | chr3_4:67605367-67605386 | None:intergenic | 40.0% | |
| GATTGTGTGTGGAACTTATG+TGG | + | chr3_4:67605531-67605550 | Msa0516160:CDS | 40.0% | |
| GATCAGCTCTCCTATTTACA+AGG | + | chr3_4:67605587-67605606 | Msa0516160:CDS | 40.0% | |
| ! | TCAAGAAGTCTGTTCTGGTT+AGG | + | chr3_4:67605807-67605826 | Msa0516160:three_prime_UTR | 40.0% |
| !! | TCCCTTTCTCATTCTGGTTC+TGG | + | chr3_4:67599579-67599598 | Msa0516160:five_prime_UTR | 45.0% |
| CACCAGAACCAGAATGAGAA+AGG | - | chr3_4:67599584-67599603 | None:intergenic | 45.0% | |
| CTCTGTATGCACCATTGATG+TGG | + | chr3_4:67599737-67599756 | Msa0516160:intron | 45.0% | |
| GGCTATCAGAGGTTTGACAA+TGG | + | chr3_4:67599934-67599953 | Msa0516160:intron | 45.0% | |
| TTTGTAGAACTGGGCCATAC+CGG | + | chr3_4:67599960-67599979 | Msa0516160:CDS | 45.0% | |
| GCTGGACAATCATCAAATGC+AGG | + | chr3_4:67600061-67600080 | Msa0516160:CDS | 45.0% | |
| TTCAATGGAGTCGCATGAAG+AGG | + | chr3_4:67600141-67600160 | Msa0516160:CDS | 45.0% | |
| ATGCAAACGGAAGAGGTCTT+TGG | - | chr3_4:67600169-67600188 | None:intergenic | 45.0% | |
| AAAGACCTCTTCCGTTTGCA+TGG | + | chr3_4:67600168-67600187 | Msa0516160:CDS | 45.0% | |
| !! | AGTTTTGCTATAGGCGGATG+AGG | + | chr3_4:67600348-67600367 | Msa0516160:intron | 45.0% |
| GGTGTTTGAAGGCAAGGTTA+AGG | + | chr3_4:67600372-67600391 | Msa0516160:CDS | 45.0% | |
| GCAAGGTTAAGGACAGTGTT+AGG | + | chr3_4:67600383-67600402 | Msa0516160:CDS | 45.0% | |
| TCGAGGAAAACGAGCAATAG+AGG | + | chr3_4:67600543-67600562 | Msa0516160:CDS | 45.0% | |
| TATATCTCGTTGCCTGCAAG+TGG | + | chr3_4:67600707-67600726 | Msa0516160:CDS | 45.0% | |
| ! | ACTGGCTTCAACAGTCAGAT+TGG | + | chr3_4:67600932-67600951 | Msa0516160:CDS | 45.0% |
| CACTGGACGAAGAATCTGTT+AGG | + | chr3_4:67600980-67600999 | Msa0516160:CDS | 45.0% | |
| GGACGAAGAATCTGTTAGGA+AGG | + | chr3_4:67600984-67601003 | Msa0516160:CDS | 45.0% | |
| AAGGTAGGAGAAGACACAAC+TGG | + | chr3_4:67601003-67601022 | Msa0516160:CDS | 45.0% | |
| CGCAATTGCCTAGAAATTGC+GGG | - | chr3_4:67601033-67601052 | None:intergenic | 45.0% | |
| TTCCAGCCTCAACTCTGTAT+GGG | - | chr3_4:67601242-67601261 | None:intergenic | 45.0% | |
| TTTCCAGCCTCAACTCTGTA+TGG | - | chr3_4:67601243-67601262 | None:intergenic | 45.0% | |
| AAGTGCAACAGACTGTAGGA+AGG | + | chr3_4:67601532-67601551 | Msa0516160:intron | 45.0% | |
| AGTGCAACAGACTGTAGGAA+GGG | + | chr3_4:67601533-67601552 | Msa0516160:intron | 45.0% | |
| AGGACAGGTGTAGCAAAAGA+AGG | - | chr3_4:67601734-67601753 | None:intergenic | 45.0% | |
| !! | TGATGTGGCTAGTTTCTTGG+AGG | - | chr3_4:67601775-67601794 | None:intergenic | 45.0% |
| !! | TGCTGATGTGGCTAGTTTCT+TGG | - | chr3_4:67601778-67601797 | None:intergenic | 45.0% |
| !! | CATATGTTAGGTATCGGGCT+AGG | - | chr3_4:67601840-67601859 | None:intergenic | 45.0% |
| CATGAGAAGAAAGGTTGACC+AGG | - | chr3_4:67601977-67601996 | None:intergenic | 45.0% | |
| TACTTAACAGGTCGGTACAC+TGG | + | chr3_4:67602018-67602037 | Msa0516160:intron | 45.0% | |
| ACTTAACAGGTCGGTACACT+GGG | + | chr3_4:67602019-67602038 | Msa0516160:intron | 45.0% | |
| TGCGAGGATGGTTCAAATAG+AGG | + | chr3_4:67602058-67602077 | Msa0516160:CDS | 45.0% | |
| GCTCTATGGAAAACATGGAC+AGG | + | chr3_4:67602080-67602099 | Msa0516160:CDS | 45.0% | |
| TTTGACATGAGGTATGGCCT+CGG | + | chr3_4:67602121-67602140 | Msa0516160:intron | 45.0% | |
| GCTTACAGCAAAGGGGAAAA+AGG | - | chr3_4:67602481-67602500 | None:intergenic | 45.0% | |
| ACTCACAGCTTACAGCAAAG+GGG | - | chr3_4:67602488-67602507 | None:intergenic | 45.0% | |
| AAGGGTCAACCCTTGTAAGA+TGG | + | chr3_4:67602771-67602790 | Msa0516160:intron | 45.0% | |
| AGAAAAGATAGAGGCAGAGG+CGG | + | chr3_4:67602850-67602869 | Msa0516160:intron | 45.0% | |
| ATGAGAGGTTACCTAGGTTG+TGG | + | chr3_4:67602880-67602899 | Msa0516160:intron | 45.0% | |
| TGAGAGGTTACCTAGGTTGT+GGG | + | chr3_4:67602881-67602900 | Msa0516160:intron | 45.0% | |
| !! | TTTGAGTTGGTGATGAGGTG+AGG | - | chr3_4:67602918-67602937 | None:intergenic | 45.0% |
| CGCTATTACATCTCGGGATT+TGG | - | chr3_4:67603165-67603184 | None:intergenic | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3_4:67603169-67603188 | Msa0516160:intron | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3_4:67603169-67603188 | Msa0516160:intron | 45.0% | |
| CTACGCATCTTCAGTGAAAG+TGG | + | chr3_4:67603800-67603819 | Msa0516160:intron | 45.0% | |
| GCAGATGCTTGATAGGAACT+GGG | + | chr3_4:67603883-67603902 | Msa0516160:intron | 45.0% | |
| CAGATGCTTGATAGGAACTG+GGG | + | chr3_4:67603884-67603903 | Msa0516160:intron | 45.0% | |
| TGCTAGCAACCAAACCTTCT+CGG | + | chr3_4:67603933-67603952 | Msa0516160:CDS | 45.0% | |
| CCTTATTCTCCGAGAAGGTT+TGG | - | chr3_4:67603945-67603964 | None:intergenic | 45.0% | |
| CCAAACCTTCTCGGAGAATA+AGG | + | chr3_4:67603942-67603961 | Msa0516160:CDS | 45.0% | |
| GCATACCTTATTCTCCGAGA+AGG | - | chr3_4:67603950-67603969 | None:intergenic | 45.0% | |
| ! | TAAGGCACCCATTCCTTTGT+GGG | + | chr3_4:67604301-67604320 | Msa0516160:CDS | 45.0% |
| ATCTTGGCCCACAAAGGAAT+GGG | - | chr3_4:67604311-67604330 | None:intergenic | 45.0% | |
| CACTGCAATGCGTATTAGTG+AGG | + | chr3_4:67604377-67604396 | Msa0516160:CDS | 45.0% | |
| GTACATTTATCGTCAGCCTC+AGG | + | chr3_4:67604401-67604420 | Msa0516160:CDS | 45.0% | |
| CAGCCTCAGGTATTCATCTA+AGG | + | chr3_4:67604414-67604433 | Msa0516160:intron | 45.0% | |
| TATGCATAGCGTTCGACTGA+TGG | + | chr3_4:67604593-67604612 | Msa0516160:intron | 45.0% | |
| ATGCATAGCGTTCGACTGAT+GGG | + | chr3_4:67604594-67604613 | Msa0516160:intron | 45.0% | |
| GAATCCTCATCCAAAGCCAA+AGG | + | chr3_4:67604675-67604694 | Msa0516160:CDS | 45.0% | |
| GTCTTGTAGATTGACAGCCA+TGG | - | chr3_4:67604835-67604854 | None:intergenic | 45.0% | |
| !! | TACAATAGGCGCCATTTTCC+TGG | - | chr3_4:67605007-67605026 | None:intergenic | 45.0% |
| CAATGTCAGAGACGAAGGAA+AGG | - | chr3_4:67605135-67605154 | None:intergenic | 45.0% | |
| CTTTCCTTCGTCTCTGACAT+TGG | + | chr3_4:67605133-67605152 | Msa0516160:CDS | 45.0% | |
| GAATCCAATGTCAGAGACGA+AGG | - | chr3_4:67605140-67605159 | None:intergenic | 45.0% | |
| AGCAAGACAATACCTCAGAG+AGG | + | chr3_4:67605266-67605285 | Msa0516160:CDS | 45.0% | |
| AATATCACCCGACGCAAACT+TGG | - | chr3_4:67605401-67605420 | None:intergenic | 45.0% | |
| GTGGAACTTATGTGGACTCA+AGG | + | chr3_4:67605539-67605558 | Msa0516160:CDS | 45.0% | |
| ! | CTGTTCTGGTTAGGAACTGT+AGG | + | chr3_4:67605816-67605835 | Msa0516160:three_prime_UTR | 45.0% |
| ! | AACTGGGCCATACCGGATTT+TGG | + | chr3_4:67599967-67599986 | Msa0516160:CDS | 50.0% |
| TGATTGTCCAGCGAAACGCA+GGG | - | chr3_4:67600053-67600072 | None:intergenic | 50.0% | |
| ATGATTGTCCAGCGAAACGC+AGG | - | chr3_4:67600054-67600073 | None:intergenic | 50.0% | |
| ! | TGCAGGCAAGAGAAAGCACA+AGG | + | chr3_4:67600078-67600097 | Msa0516160:CDS | 50.0% |
| CGTTTCCTCCTCCATGCAAA+CGG | - | chr3_4:67600182-67600201 | None:intergenic | 50.0% | |
| CGTTTGCATGGAGGAGGAAA+CGG | + | chr3_4:67600180-67600199 | Msa0516160:CDS | 50.0% | |
| !! | GATCGTGTTAGCATTGGCCT+TGG | + | chr3_4:67600244-67600263 | Msa0516160:CDS | 50.0% |
| !! | TTAGCATTGGCCTTGGTGGA+CGG | + | chr3_4:67600251-67600270 | Msa0516160:CDS | 50.0% |
| GATTTCATACCCGTCCACCA+AGG | - | chr3_4:67600264-67600283 | None:intergenic | 50.0% | |
| ! | TTTGCTATAGGCGGATGAGG+TGG | + | chr3_4:67600351-67600370 | Msa0516160:intron | 50.0% |
| TGAGGTGGTGTTTGAAGGCA+AGG | + | chr3_4:67600366-67600385 | Msa0516160:CDS | 50.0% | |
| ! | TTTTCCTCGACGCTGAGCTT+GGG | - | chr3_4:67600533-67600552 | None:intergenic | 50.0% |
| AGATACATACCCCGTGGACT+AGG | - | chr3_4:67600751-67600770 | None:intergenic | 50.0% | |
| ACACTGAGATACATACCCCG+TGG | - | chr3_4:67600757-67600776 | None:intergenic | 50.0% | |
| TTTAGAGGCCACTCTTGCAC+TGG | + | chr3_4:67600963-67600982 | Msa0516160:CDS | 50.0% | |
| TTCTTCGTCCAGTGCAAGAG+TGG | - | chr3_4:67600974-67600993 | None:intergenic | 50.0% | |
| GTAGGAGAAGACACAACTGG+AGG | + | chr3_4:67601006-67601025 | Msa0516160:CDS | 50.0% | |
| GTCTTGCCCATACAGAGTTG+AGG | + | chr3_4:67601233-67601252 | Msa0516160:CDS | 50.0% | |
| ! | GTGGAGTGTGGATTACCTTG+CGG | + | chr3_4:67601359-67601378 | Msa0516160:intron | 50.0% |
| ! | AGTGTGGATTACCTTGCGGT+TGG | + | chr3_4:67601363-67601382 | Msa0516160:intron | 50.0% |
| CTCTCTCTGCCCAAACCATA+TGG | + | chr3_4:67601682-67601701 | Msa0516160:intron | 50.0% | |
| GTGTTTCCTCATGCATAGCC+TGG | + | chr3_4:67601956-67601975 | Msa0516160:intron | 50.0% | |
| !!! | AAATGCCGCTGACTTTTGCG+AGG | + | chr3_4:67602042-67602061 | Msa0516160:CDS | 50.0% |
| ACCATCCTCGCAAAAGTCAG+CGG | - | chr3_4:67602050-67602069 | None:intergenic | 50.0% | |
| !! | AGAGACAAGAAGGCGTCCTT+GGG | - | chr3_4:67602420-67602439 | None:intergenic | 50.0% |
| !! | TAGAGACAAGAAGGCGTCCT+TGG | - | chr3_4:67602421-67602440 | None:intergenic | 50.0% |
| CAGGAGCTGCACATCTGTTA+GGG | + | chr3_4:67602708-67602727 | Msa0516160:intron | 50.0% | |
| AGAGGCGGTTTAGTGATGAG+AGG | + | chr3_4:67602865-67602884 | Msa0516160:intron | 50.0% | |
| GAGAGGTTACCTAGGTTGTG+GGG | + | chr3_4:67602882-67602901 | Msa0516160:intron | 50.0% | |
| !! | AGCGGTATAGGGGCACTATA+CGG | + | chr3_4:67603181-67603200 | Msa0516160:intron | 50.0% |
| CATATGGAGAGTTTCTGCCG+AGG | - | chr3_4:67603751-67603770 | None:intergenic | 50.0% | |
| CTCGGCAGAAACTCTCCATA+TGG | + | chr3_4:67603749-67603768 | Msa0516160:CDS | 50.0% | |
| CGCAGATGCTTGATAGGAAC+TGG | + | chr3_4:67603882-67603901 | Msa0516160:intron | 50.0% | |
| ! | CTAAGGCACCCATTCCTTTG+TGG | + | chr3_4:67604300-67604319 | Msa0516160:CDS | 50.0% |
| CATCTTGGCCCACAAAGGAA+TGG | - | chr3_4:67604312-67604331 | None:intergenic | 50.0% | |
| CATTCCTTTGTGGGCCAAGA+TGG | + | chr3_4:67604310-67604329 | Msa0516160:CDS | 50.0% | |
| TTCATGTGTCCAGAACTGGC+TGG | + | chr3_4:67604973-67604992 | Msa0516160:intron | 50.0% | |
| TGGAGCTGCTTCCAGGAAAA+TGG | + | chr3_4:67604993-67605012 | Msa0516160:CDS | 50.0% | |
| TGGCGCCTATTGTATTGCAC+TGG | + | chr3_4:67605013-67605032 | Msa0516160:CDS | 50.0% | |
| GGCGCCTATTGTATTGCACT+GGG | + | chr3_4:67605014-67605033 | Msa0516160:CDS | 50.0% | |
| GCCTATTGTATTGCACTGGG+AGG | + | chr3_4:67605017-67605036 | Msa0516160:CDS | 50.0% | |
| GCCTCCCAGTGCAATACAAT+AGG | - | chr3_4:67605021-67605040 | None:intergenic | 50.0% | |
| ! | TATTGCACTGGGAGGCATGT+TGG | + | chr3_4:67605025-67605044 | Msa0516160:CDS | 50.0% |
| ! | ATTGCACTGGGAGGCATGTT+GGG | + | chr3_4:67605026-67605045 | Msa0516160:CDS | 50.0% |
| TCTCCAACTAGTACACGGAC+AGG | - | chr3_4:67605070-67605089 | None:intergenic | 50.0% | |
| GTCAGAGACGAAGGAAAGGT+TGG | - | chr3_4:67605131-67605150 | None:intergenic | 50.0% | |
| ! | CAGTCATGATTGGTCAGGAC+TGG | + | chr3_4:67605161-67605180 | Msa0516160:CDS | 50.0% |
| ! | TGGTAAAAGAGGAAGGGTGC+AGG | + | chr3_4:67605198-67605217 | Msa0516160:CDS | 50.0% |
| AGCTAAAGCCTCCTCATTGC+CGG | - | chr3_4:67605308-67605327 | None:intergenic | 50.0% | |
| TCAAGGTTGCTCGTTCTTCG+AGG | + | chr3_4:67605556-67605575 | Msa0516160:CDS | 50.0% | |
| CAAGGTTGCTCGTTCTTCGA+GGG | + | chr3_4:67605557-67605576 | Msa0516160:CDS | 50.0% | |
| AAGGTTGCTCGTTCTTCGAG+GGG | + | chr3_4:67605558-67605577 | Msa0516160:CDS | 50.0% | |
| CTCGTTCTTCGAGGGGTTAA+TGG | + | chr3_4:67605565-67605584 | Msa0516160:CDS | 50.0% | |
| AACCCGTGGCAAAACGTTCC+CGG | + | chr3_4:67599469-67599488 | Msa0516160:five_prime_UTR | 55.0% | |
| AGTTGCGTGCTACAGAACGC+CGG | - | chr3_4:67599491-67599510 | None:intergenic | 55.0% | |
| GATTGTCCAGCGAAACGCAG+GGG | - | chr3_4:67600052-67600071 | None:intergenic | 55.0% | |
| GACCTCTTCCGTTTGCATGG+AGG | + | chr3_4:67600171-67600190 | Msa0516160:CDS | 55.0% | |
| CTCCTCCATGCAAACGGAAG+AGG | - | chr3_4:67600176-67600195 | None:intergenic | 55.0% | |
| CTCTTCCGTTTGCATGGAGG+AGG | + | chr3_4:67600174-67600193 | Msa0516160:CDS | 55.0% | |
| !! | CGTGTTAGCATTGGCCTTGG+TGG | + | chr3_4:67600247-67600266 | Msa0516160:CDS | 55.0% |
| !! | TAGCATTGGCCTTGGTGGAC+GGG | + | chr3_4:67600252-67600271 | Msa0516160:CDS | 55.0% |
| GCGGATGAGGTGGTGTTTGA+AGG | + | chr3_4:67600361-67600380 | Msa0516160:CDS | 55.0% | |
| ! | GTTTTCCTCGACGCTGAGCT+TGG | - | chr3_4:67600534-67600553 | None:intergenic | 55.0% |
| ATCTCGTTGCCTGCAAGTGG+TGG | + | chr3_4:67600710-67600729 | Msa0516160:CDS | 55.0% | |
| TTGCCTGCAAGTGGTGGTAG+TGG | + | chr3_4:67600716-67600735 | Msa0516160:CDS | 55.0% | |
| GAACCACTACCACCACTTGC+AGG | - | chr3_4:67600722-67600741 | None:intergenic | 55.0% | |
| CTGGAGGTCCCGCAATTTCT+AGG | + | chr3_4:67601022-67601041 | Msa0516160:CDS | 55.0% | |
| GGGCAAGACCATGACTATGC+AGG | - | chr3_4:67601222-67601241 | None:intergenic | 55.0% | |
| TGCCCATACAGAGTTGAGGC+TGG | + | chr3_4:67601237-67601256 | Msa0516160:CDS | 55.0% | |
| GGCTAGGCCTAAGCCCAAAA+AGG | - | chr3_4:67601824-67601843 | None:intergenic | 55.0% | |
| GGTTGACCAGGCTATGCATG+AGG | - | chr3_4:67601965-67601984 | None:intergenic | 55.0% | |
| GTCCTTGGGCACTTCCTTCA+CGG | - | chr3_4:67602406-67602425 | None:intergenic | 55.0% | |
| GCAGGAGCTGCACATCTGTT+AGG | + | chr3_4:67602707-67602726 | Msa0516160:intron | 55.0% | |
| !! | GCGGTATAGGGGCACTATAC+CGG | + | chr3_4:67603182-67603201 | Msa0516160:intron | 55.0% |
| CTTGATAGGAACTGGGGTGC+TGG | + | chr3_4:67603890-67603909 | Msa0516160:CDS | 55.0% | |
| !! | ATAGGAACTGGGGTGCTGGT+TGG | + | chr3_4:67603894-67603913 | Msa0516160:CDS | 55.0% |
| CTAGTACACGGACAGGAGGT+TGG | - | chr3_4:67605063-67605082 | None:intergenic | 55.0% | |
| CCAACTAGTACACGGACAGG+AGG | - | chr3_4:67605067-67605086 | None:intergenic | 55.0% | |
| CCTCCTGTCCGTGTACTAGT+TGG | + | chr3_4:67605064-67605083 | Msa0516160:CDS | 55.0% | |
| !! | GACTGGCCTCATGACAAAGC+TGG | + | chr3_4:67605178-67605197 | Msa0516160:CDS | 55.0% |
| AAGCCTCCTCATTGCCGGAA+GGG | - | chr3_4:67605303-67605322 | None:intergenic | 55.0% | |
| AAAGCCTCCTCATTGCCGGA+AGG | - | chr3_4:67605304-67605323 | None:intergenic | 55.0% | |
| TTGGCTGCAGGGAGACTTGA+TGG | - | chr3_4:67605382-67605401 | None:intergenic | 55.0% | |
| TAGGGAGGCAGACGTTGACG+CGG | + | chr3_4:67599442-67599461 | Msa0516160:five_prime_UTR | 60.0% | |
| ! | ACGCCGGGAACGTTTTGCCA+CGG | - | chr3_4:67599475-67599494 | None:intergenic | 60.0% |
| GTTGCGTGCTACAGAACGCC+GGG | - | chr3_4:67599490-67599509 | None:intergenic | 60.0% | |
| AGTTCCCAAGCTCAGCGTCG+AGG | + | chr3_4:67600526-67600545 | Msa0516160:CDS | 60.0% | |
| ! | TCTGGGATCAGCCAACCGCA+AGG | - | chr3_4:67601377-67601396 | None:intergenic | 60.0% |
| ! | CGGTTGGCTGATCCCAGAGA+AGG | + | chr3_4:67601379-67601398 | Msa0516160:intron | 60.0% |
| !!! | GCCGCTGACTTTTGCGAGGA+TGG | + | chr3_4:67602046-67602065 | Msa0516160:CDS | 60.0% |
| !! | GACCGTGAAGGAAGTGCCCA+AGG | + | chr3_4:67602401-67602420 | Msa0516160:intron | 60.0% |
| CTCGCCATCTTGGCCCACAA+AGG | - | chr3_4:67604317-67604336 | None:intergenic | 60.0% | |
| GACGGGACTACTCGCCATCT+TGG | - | chr3_4:67604327-67604346 | None:intergenic | 60.0% | |
| ATGGCGAGTAGTCCCGTCGA+TGG | + | chr3_4:67604329-67604348 | Msa0516160:CDS | 60.0% | |
| GAAGCAGCTCCAGCCAGTTC+TGG | - | chr3_4:67604985-67605004 | None:intergenic | 60.0% | |
| AACTGGCTGGAGCTGCTTCC+AGG | + | chr3_4:67604986-67605005 | Msa0516160:CDS | 60.0% | |
| ACGGACAGGAGGTTGGCGAA+GGG | - | chr3_4:67605056-67605075 | None:intergenic | 60.0% | |
| GCGGAATGAGAGCCTCTCTG+AGG | - | chr3_4:67605281-67605300 | None:intergenic | 60.0% | |
| AGGCTCTCATTCCGCCCTTC+CGG | + | chr3_4:67605286-67605305 | Msa0516160:CDS | 60.0% | |
| ATTCCGCCCTTCCGGCAATG+AGG | + | chr3_4:67605294-67605313 | Msa0516160:CDS | 60.0% | |
| CCGACGCAAACTTGGCTGCA+GGG | - | chr3_4:67605393-67605412 | None:intergenic | 60.0% | |
| CCCTGCAGCCAAGTTTGCGT+CGG | + | chr3_4:67605390-67605409 | Msa0516160:CDS | 60.0% | |
| CCTGCAGCCAAGTTTGCGTC+GGG | + | chr3_4:67605391-67605410 | Msa0516160:CDS | 60.0% | |
| GTTGACGCGGTGGAAACCCG+TGG | + | chr3_4:67599455-67599474 | Msa0516160:five_prime_UTR | 65.0% | |
| ! | CGCCGGGAACGTTTTGCCAC+GGG | - | chr3_4:67599474-67599493 | None:intergenic | 65.0% |
| CCAGCGAAACGCAGGGGAAC+AGG | - | chr3_4:67600046-67600065 | None:intergenic | 65.0% | |
| CCTGTTCCCCTGCGTTTCGC+TGG | + | chr3_4:67600043-67600062 | Msa0516160:CDS | 65.0% | |
| CACGGACAGGAGGTTGGCGA+AGG | - | chr3_4:67605057-67605076 | None:intergenic | 65.0% | |
| CCTCCTCATTGCCGGAAGGG+CGG | - | chr3_4:67605300-67605319 | None:intergenic | 65.0% | |
| CCCGACGCAAACTTGGCTGC+AGG | - | chr3_4:67605394-67605413 | None:intergenic | 65.0% | |
| GGAGGCAGACGTTGACGCGG+TGG | + | chr3_4:67599445-67599464 | Msa0516160:five_prime_UTR | 70.0% | |
| CCGCCCTTCCGGCAATGAGG+AGG | + | chr3_4:67605297-67605316 | Msa0516160:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 67599406 | 67605921 | 67599406 | ID=Msa0516160;Name=Msa0516160 |
| chr3_4 | mRNA | 67599406 | 67605921 | 67599406 | ID=Msa0516160-mRNA-1;Parent=Msa0516160;Name=Msa0516160-mRNA-1;_AED=0.06;_eAED=0.06;_QI=205|1|1|1|0.92|0.85|14|282|677 |
| chr3_4 | exon | 67599406 | 67599600 | 67599406 | ID=Msa0516160-mRNA-1:exon:17646;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67599943 | 67600273 | 67599943 | ID=Msa0516160-mRNA-1:exon:17647;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67600361 | 67600404 | 67600361 | ID=Msa0516160-mRNA-1:exon:17648;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67600486 | 67600564 | 67600486 | ID=Msa0516160-mRNA-1:exon:17649;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67600644 | 67600760 | 67600644 | ID=Msa0516160-mRNA-1:exon:17650;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67600907 | 67601089 | 67600907 | ID=Msa0516160-mRNA-1:exon:17651;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67601211 | 67601297 | 67601211 | ID=Msa0516160-mRNA-1:exon:17652;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67602028 | 67602131 | 67602028 | ID=Msa0516160-mRNA-1:exon:17653;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67602211 | 67602298 | 67602211 | ID=Msa0516160-mRNA-1:exon:17654;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67603707 | 67603787 | 67603707 | ID=Msa0516160-mRNA-1:exon:17655;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67603887 | 67603963 | 67603887 | ID=Msa0516160-mRNA-1:exon:17656;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67604287 | 67604422 | 67604287 | ID=Msa0516160-mRNA-1:exon:17657;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67604634 | 67604696 | 67604634 | ID=Msa0516160-mRNA-1:exon:17658;Parent=Msa0516160-mRNA-1 |
| chr3_4 | exon | 67604986 | 67605921 | 67604986 | ID=Msa0516160-mRNA-1:exon:17659;Parent=Msa0516160-mRNA-1 |
| chr3_4 | five_prime_UTR | 67599406 | 67599600 | 67599406 | ID=Msa0516160-mRNA-1:five_prime_utr;Parent=Msa0516160-mRNA-1 |
| chr3_4 | five_prime_UTR | 67599943 | 67599952 | 67599943 | ID=Msa0516160-mRNA-1:five_prime_utr;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67599953 | 67600273 | 67599953 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67600361 | 67600404 | 67600361 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67600486 | 67600564 | 67600486 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67600644 | 67600760 | 67600644 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67600907 | 67601089 | 67600907 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67601211 | 67601297 | 67601211 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67602028 | 67602131 | 67602028 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67602211 | 67602298 | 67602211 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67603707 | 67603787 | 67603707 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67603887 | 67603963 | 67603887 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67604287 | 67604422 | 67604287 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67604634 | 67604696 | 67604634 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | CDS | 67604986 | 67605639 | 67604986 | ID=Msa0516160-mRNA-1:cds;Parent=Msa0516160-mRNA-1 |
| chr3_4 | three_prime_UTR | 67605640 | 67605921 | 67605640 | ID=Msa0516160-mRNA-1:three_prime_utr;Parent=Msa0516160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
