Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270820 | XP_003593089.1 | 88.598 | 649 | 41 | 4 | 1 | 636 | 1 | 629 | 0.0 | 1110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270820 | sp|A5YVF1|SGS3_SOLLC | 50.575 | 435 | 202 | 5 | 209 | 633 | 195 | 626 | 4.98e-138 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270820 | G7IK02 | 88.598 | 649 | 41 | 4 | 1 | 636 | 1 | 629 | 0.0 | 1110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0189260 | Msa0270820 | 0.905941 | 2.518534e-80 | -8.615850e-47 |
| Msa0231600 | Msa0270820 | 0.833056 | 6.637968e-56 | -8.615850e-47 |
| Msa0241750 | Msa0270820 | 0.804768 | 1.843858e-49 | -8.615850e-47 |
| Msa0270820 | Msa0309690 | 0.862613 | 4.476823e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270820 | MtrunA17_Chr2g0278291 | 88.598 | 649 | 41 | 4 | 1 | 636 | 1 | 629 | 0.0 | 1110 |
| Msa0270820 | MtrunA17_Chr3g0131291 | 50.673 | 446 | 206 | 4 | 199 | 630 | 195 | 640 | 4.45e-150 | 448 |
| Msa0270820 | MtrunA17_Chr3g0131301 | 51.910 | 445 | 200 | 4 | 200 | 630 | 270 | 714 | 1.17e-146 | 442 |
| Msa0270820 | MtrunA17_Chr1g0205401 | 30.625 | 160 | 82 | 6 | 317 | 457 | 315 | 464 | 4.08e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270820 | AT5G23570.1 | 48.268 | 433 | 209 | 5 | 209 | 628 | 190 | 620 | 1.91e-132 | 402 |
| Msa0270820 | AT5G23570.3 | 48.268 | 433 | 209 | 5 | 209 | 628 | 190 | 620 | 1.91e-132 | 402 |
| Msa0270820 | AT5G23570.4 | 53.846 | 312 | 133 | 4 | 211 | 513 | 192 | 501 | 1.40e-116 | 357 |
| Msa0270820 | AT5G23570.2 | 53.846 | 312 | 133 | 4 | 211 | 513 | 192 | 501 | 1.40e-116 | 357 |
Find 141 sgRNAs with CRISPR-Local
Find 252 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTATTGGAACTAGTCAAAA+TGG | 0.187396 | 2_3:+2144413 | None:intergenic |
| TTCAGCTTCTGGATCAAATT+TGG | 0.188895 | 2_3:+2147594 | None:intergenic |
| TACTCTTCTTGCTCCCTTCA+TGG | 0.190892 | 2_3:+2147142 | None:intergenic |
| GGCGGAAAGCGCCAGCTTTA+TGG | 0.215269 | 2_3:-2146298 | Msa0270820:CDS |
| TCACTTCCATTAAGAGTCTT+TGG | 0.276457 | 2_3:+2147504 | None:intergenic |
| GATTCTCCAAAGACTCTTAA+TGG | 0.276888 | 2_3:-2147510 | Msa0270820:CDS |
| CGCTTTCCGCCTGGGACAAA+TGG | 0.291352 | 2_3:+2146310 | None:intergenic |
| TAAAGCTGGCGCTTTCCGCC+TGG | 0.298968 | 2_3:+2146301 | None:intergenic |
| GCAAGAAGAGTAAGTGGTTT+AGG | 0.299348 | 2_3:-2147131 | Msa0270820:CDS |
| TGGAAGTGAAAACGGAGTTT+TGG | 0.320583 | 2_3:-2147490 | Msa0270820:CDS |
| CCAGCATGCCAAGACGGTCC+TGG | 0.333435 | 2_3:-2147039 | Msa0270820:CDS |
| CTATACACAGTTTCCAGCTT+TGG | 0.336271 | 2_3:+2147753 | None:intergenic |
| CCATCCTTGCAATCCTTAGA+TGG | 0.340828 | 2_3:+2147426 | None:intergenic |
| TTAAGGATCATGAAATTGTT+TGG | 0.345115 | 2_3:-2146834 | Msa0270820:CDS |
| CTTGATTGCTTCAGTGATTA+CGG | 0.365128 | 2_3:-2146493 | Msa0270820:CDS |
| AGTTGATACAGCTCCATCTA+AGG | 0.372872 | 2_3:-2147439 | Msa0270820:CDS |
| GGGCAGTGCCACCGAGTTGC+TGG | 0.377036 | 2_3:+2147060 | None:intergenic |
| CCAGGACCGTCTTGGCATGC+TGG | 0.377905 | 2_3:+2147039 | None:intergenic |
| TCAAAGAGCAAGGAAGAGAT+AGG | 0.378403 | 2_3:-2146357 | Msa0270820:CDS |
| GGTTGAACTTGAGAAGGAAT+TGG | 0.394812 | 2_3:-2144628 | Msa0270820:CDS |
| CAGCATGCCAAGACGGTCCT+GGG | 0.400226 | 2_3:-2147038 | Msa0270820:CDS |
| GAATTGTAGTGGACAGGAAT+GGG | 0.406577 | 2_3:-2146529 | Msa0270820:intron |
| TCTGAATTCGATTTGGTGTC+GGG | 0.407799 | 2_3:+2147690 | None:intergenic |
| CATGCATTTGAACTAGAATT+CGG | 0.408902 | 2_3:+2147624 | None:intergenic |
| AGAAAGCTGTTAATATTAAA+CGG | 0.423077 | 2_3:-2144553 | Msa0270820:exon |
| CAGTGATTACGGTGCATTGA+AGG | 0.427500 | 2_3:-2146482 | Msa0270820:CDS |
| TTCTGAATTCGATTTGGTGT+CGG | 0.427939 | 2_3:+2147689 | None:intergenic |
| CGGCTGATTGAATTTGTAAC+CGG | 0.429012 | 2_3:+2147725 | None:intergenic |
| GAGAGGAGCTCCATTGATAA+GGG | 0.430174 | 2_3:-2146899 | Msa0270820:CDS |
| CTATTGGAACTAGTCAAAAT+GGG | 0.431934 | 2_3:+2144414 | None:intergenic |
| TTCGGAGAACACCAAGGCAT+TGG | 0.440286 | 2_3:+2147642 | None:intergenic |
| GGGGCTATTGATTGGTATCA+TGG | 0.440863 | 2_3:-2147018 | Msa0270820:CDS |
| GAATGATTTGTATTTGATCA+AGG | 0.441882 | 2_3:+2145034 | None:intergenic |
| AAAAGCATCAACGCTTTCTT+CGG | 0.442560 | 2_3:+2147776 | None:intergenic |
| TTATATACTTGGCTTTCAAA+TGG | 0.443445 | 2_3:-2144366 | Msa0270820:three_prime_UTR |
| GGAGAGGAGCTCCATTGATA+AGG | 0.444345 | 2_3:-2146900 | Msa0270820:CDS |
| AGTTTGTTCTGAATTCGATT+TGG | 0.445545 | 2_3:+2147683 | None:intergenic |
| AGGAAGAGATAGGGAAGCTT+GGG | 0.449387 | 2_3:-2146347 | Msa0270820:CDS |
| GCTTCTGGATCAAATTTGGT+TGG | 0.454560 | 2_3:+2147598 | None:intergenic |
| TCAACAGCTTGACATTTGTA+AGG | 0.458482 | 2_3:-2145833 | Msa0270820:CDS |
| CAAGAAGCGATGTGTGTCAA+TGG | 0.465507 | 2_3:-2144958 | Msa0270820:CDS |
| TTGTCCTAGAATGATTCAAA+AGG | 0.466010 | 2_3:+2146986 | None:intergenic |
| CGTAATCACTGAAGCAATCA+AGG | 0.468384 | 2_3:+2146494 | None:intergenic |
| GGGTCTCGATAATAAAGTTA+AGG | 0.469529 | 2_3:-2146851 | Msa0270820:CDS |
| GCTTCACCACCCCTTATCAA+TGG | 0.470736 | 2_3:+2146889 | None:intergenic |
| ACTCTTAATGGAAGTGAAAA+CGG | 0.471327 | 2_3:-2147498 | Msa0270820:CDS |
| AAATCGAATTCAGAACAAAC+TGG | 0.472407 | 2_3:-2147681 | Msa0270820:CDS |
| TCGGAGAACACCAAGGCATT+GGG | 0.474823 | 2_3:+2147643 | None:intergenic |
| CAGGACCGTCTTGGCATGCT+GGG | 0.475050 | 2_3:+2147040 | None:intergenic |
| ACGGTCCTGGGGCTATTGAT+TGG | 0.476688 | 2_3:-2147026 | Msa0270820:CDS |
| AAAGCTGGCGCTTTCCGCCT+GGG | 0.477327 | 2_3:+2146302 | None:intergenic |
| TGTCCTAGAATGATTCAAAA+GGG | 0.479440 | 2_3:+2146987 | None:intergenic |
| TTGAAGGCTCGACACTCATA+TGG | 0.479633 | 2_3:-2146466 | Msa0270820:CDS |
| ATTCTAGGACAATAAAAGTA+AGG | 0.480913 | 2_3:-2146975 | Msa0270820:CDS |
| CCATCTAAGGATTGCAAGGA+TGG | 0.485298 | 2_3:-2147426 | Msa0270820:CDS |
| AAGGAAGAGATAGGGAAGCT+TGG | 0.486839 | 2_3:-2146348 | Msa0270820:CDS |
| AATTAGATCATATCAAGAAA+TGG | 0.487848 | 2_3:-2145890 | Msa0270820:CDS |
| ACCGGAGAGAAAAGCCATGA+AGG | 0.488739 | 2_3:-2147156 | Msa0270820:CDS |
| CAAAATGGGGAACAATACTT+TGG | 0.501868 | 2_3:+2144428 | None:intergenic |
| TGTGAAAACATTGAGAATGA+AGG | 0.504092 | 2_3:-2147369 | Msa0270820:CDS |
| GTATTCATAATGACAACCAT+TGG | 0.504257 | 2_3:+2146808 | None:intergenic |
| AAGATTAAGCACATCAATGA+TGG | 0.509281 | 2_3:-2145859 | Msa0270820:CDS |
| TGAATTGTAGTGGACAGGAA+TGG | 0.510814 | 2_3:-2146530 | Msa0270820:intron |
| GAAGAAGCAGTGGCAAGAGC+AGG | 0.513257 | 2_3:-2144649 | Msa0270820:CDS |
| TGAGTTGAATTGTAGTGGAC+AGG | 0.515959 | 2_3:-2146535 | Msa0270820:intron |
| TTCAACTTTCAAATTAAACT+CGG | 0.516735 | 2_3:+2144478 | None:intergenic |
| TGGTGAAGCCAATGGACTGT+GGG | 0.519314 | 2_3:-2146875 | Msa0270820:CDS |
| TCAACTTTCAAATTAAACTC+GGG | 0.529179 | 2_3:+2144479 | None:intergenic |
| TCATCAATCAATAGCTGCAA+AGG | 0.534515 | 2_3:-2145013 | Msa0270820:CDS |
| GGGTTATAATGGACCAGGAC+TGG | 0.535110 | 2_3:-2147565 | Msa0270820:CDS |
| CAATAGCCCCAGGACCGTCT+TGG | 0.535212 | 2_3:+2147031 | None:intergenic |
| AGCTCCATCTAAGGATTGCA+AGG | 0.537739 | 2_3:-2147430 | Msa0270820:CDS |
| TGTGAAAACATTGATGATGA+AGG | 0.539155 | 2_3:-2147291 | Msa0270820:CDS |
| AAGGGAGCAAGAAGAGTAAG+TGG | 0.541250 | 2_3:-2147137 | Msa0270820:CDS |
| CCCAACTGTGAAAACATTGA+GGG | 0.544229 | 2_3:-2147336 | Msa0270820:CDS |
| TATGAATACGAAATATGAGC+AGG | 0.544610 | 2_3:-2146794 | Msa0270820:CDS |
| TTCATAATGACAACCATTGG+AGG | 0.548996 | 2_3:+2146811 | None:intergenic |
| GCGCCAGCTTTATGGCTACA+TGG | 0.549024 | 2_3:-2146290 | Msa0270820:CDS |
| CGAATTCTAGTTCAAATGCA+TGG | 0.550899 | 2_3:-2147623 | Msa0270820:CDS |
| TAACAAAAGCAATAACCTAC+AGG | 0.551722 | 2_3:-2147541 | Msa0270820:CDS |
| TAATTTGAAAGTTGAAAGTG+AGG | 0.551731 | 2_3:-2144471 | Msa0270820:three_prime_UTR |
| GTTGAAAGTGAGGGTTGATG+AGG | 0.554497 | 2_3:-2144461 | Msa0270820:three_prime_UTR |
| AAGCCATGTAGCCATAAAGC+TGG | 0.555114 | 2_3:+2146287 | None:intergenic |
| CACTGCCCAGCATGCCAAGA+CGG | 0.555632 | 2_3:-2147045 | Msa0270820:CDS |
| AGTCTCAAGACAAGGATATG+AGG | 0.556736 | 2_3:-2144734 | Msa0270820:CDS |
| CAAAGAGCAAGGAAGAGATA+GGG | 0.560062 | 2_3:-2146356 | Msa0270820:CDS |
| CGACACTCATATGGTCCACA+TGG | 0.561709 | 2_3:-2146457 | Msa0270820:CDS |
| GATGGTCAATGCGATGATGA+AGG | 0.562158 | 2_3:-2147408 | Msa0270820:CDS |
| TACAAGCATTTCAAAGAGCA+AGG | 0.562650 | 2_3:-2146367 | Msa0270820:CDS |
| CAAGGATATGAGGCAATTCG+AGG | 0.564054 | 2_3:-2144724 | Msa0270820:CDS |
| ATGGTCCACATGGGCACCGA+GGG | 0.564785 | 2_3:-2146447 | Msa0270820:CDS |
| TTGAAAGTGAGGGTTGATGA+GGG | 0.564992 | 2_3:-2144460 | Msa0270820:three_prime_UTR |
| GAAACTGTGTATAGAGTGAC+CGG | 0.566329 | 2_3:-2147744 | Msa0270820:CDS |
| TGTAAGAATCCATTTGTCCC+AGG | 0.572821 | 2_3:-2146319 | Msa0270820:CDS |
| TGAAATTGTTTGGCCTCCAA+TGG | 0.573059 | 2_3:-2146824 | Msa0270820:CDS |
| GAGGAAGAGTGCTCGAGGAG+AGG | 0.576937 | 2_3:-2146916 | Msa0270820:CDS |
| GAGACCCTCCCACAGTCCAT+TGG | 0.578085 | 2_3:+2146867 | None:intergenic |
| AATTGTAGTGGACAGGAATG+GGG | 0.578878 | 2_3:-2146528 | Msa0270820:intron |
| GTGTCGGGTACTTTGCGACT+CGG | 0.579867 | 2_3:+2147705 | None:intergenic |
| TTTGAAAACATGCAGAGAAG+TGG | 0.580756 | 2_3:-2144511 | Msa0270820:three_prime_UTR |
| CCAAGGCATTGGGATCACAT+TGG | 0.587721 | 2_3:+2147653 | None:intergenic |
| CCGGAGAGAAAAGCCATGAA+GGG | 0.589269 | 2_3:-2147155 | Msa0270820:CDS |
| TTTAAATAAACTGACAGTTG+AGG | 0.590653 | 2_3:-2147094 | Msa0270820:CDS |
| GATGACACTGACTCAGACAC+CGG | 0.590929 | 2_3:-2147174 | Msa0270820:CDS |
| TCTAAATAACCTGCTACAGA+TGG | 0.591043 | 2_3:+2146403 | None:intergenic |
| TGAAGCCAATGGACTGTGGG+AGG | 0.591308 | 2_3:-2146872 | Msa0270820:CDS |
| TGTGAAAACATTGAGGGTGA+AGG | 0.591966 | 2_3:-2147330 | Msa0270820:CDS |
| TAGGACAATAAAAGTAAGGA+GGG | 0.593634 | 2_3:-2146971 | Msa0270820:CDS |
| CTAGGACAATAAAAGTAAGG+AGG | 0.593953 | 2_3:-2146972 | Msa0270820:CDS |
| AGAGCAGGTTGAACTTGAGA+AGG | 0.595315 | 2_3:-2144634 | Msa0270820:CDS |
| AAGAGGGGTTATAATGGACC+AGG | 0.596010 | 2_3:-2147570 | Msa0270820:CDS |
| ACCCAACTGTGAAAACATTG+AGG | 0.597027 | 2_3:-2147337 | Msa0270820:CDS |
| AAATCAAAACACTCATCCCT+CGG | 0.597633 | 2_3:+2146431 | None:intergenic |
| ATAAGGGGTGGTGAAGCCAA+TGG | 0.600802 | 2_3:-2146883 | Msa0270820:CDS |
| TCATCATTGATTTCACGTTG+AGG | 0.608669 | 2_3:+2147258 | None:intergenic |
| TGATACCAATCAATAGCCCC+AGG | 0.609363 | 2_3:+2147021 | None:intergenic |
| GTGGTGAAGCCAATGGACTG+TGG | 0.610915 | 2_3:-2146876 | Msa0270820:CDS |
| GAAGCCAATGGACTGTGGGA+GGG | 0.618906 | 2_3:-2146871 | Msa0270820:CDS |
| CCAATGTGATCCCAATGCCT+TGG | 0.620901 | 2_3:-2147653 | Msa0270820:CDS |
| TCATCTACAAAACAAGGAGG+AGG | 0.622985 | 2_3:-2145713 | Msa0270820:intron |
| AGATCAGTTCACCAGCAACT+CGG | 0.626667 | 2_3:-2147071 | Msa0270820:CDS |
| CTTTGGAGGAAGAGTGCTCG+AGG | 0.629120 | 2_3:-2146921 | Msa0270820:CDS |
| CTCATCCCTCGGTGCCCATG+TGG | 0.630782 | 2_3:+2146442 | None:intergenic |
| AATTTGAAAGTTGAAAGTGA+GGG | 0.634922 | 2_3:-2144470 | Msa0270820:three_prime_UTR |
| AGCATGCCAAGACGGTCCTG+GGG | 0.639910 | 2_3:-2147037 | Msa0270820:CDS |
| TAGTACGTTCTCGCACAACA+TGG | 0.640572 | 2_3:+2145743 | None:intergenic |
| AGAACATCATCTACAAAACA+AGG | 0.644083 | 2_3:-2145719 | Msa0270820:CDS |
| GTCCTAGAATGATTCAAAAG+GGG | 0.646488 | 2_3:+2146988 | None:intergenic |
| GGAGCTCCATTGATAAGGGG+TGG | 0.652082 | 2_3:-2146895 | Msa0270820:CDS |
| AGAGGAGCTCCATTGATAAG+GGG | 0.656654 | 2_3:-2146898 | Msa0270820:CDS |
| TGTCTCTGAAGAAGAAGCAG+TGG | 0.660978 | 2_3:-2144659 | Msa0270820:CDS |
| TATTGGAACTAGTCAAAATG+GGG | 0.668339 | 2_3:+2144415 | None:intergenic |
| TTTCATGAAGTCTCAAGACA+AGG | 0.670284 | 2_3:-2144742 | Msa0270820:CDS |
| AAGAATCCATTTGTCCCAGG+CGG | 0.681732 | 2_3:-2146316 | Msa0270820:CDS |
| GTATCAACTTCAACACAATG+AGG | 0.689414 | 2_3:+2147453 | None:intergenic |
| TGAGCAGGATGAAAATAACA+AGG | 0.690724 | 2_3:-2146779 | Msa0270820:intron |
| GACACTCATATGGTCCACAT+GGG | 0.691158 | 2_3:-2146456 | Msa0270820:CDS |
| TATGGTCCACATGGGCACCG+AGG | 0.701993 | 2_3:-2146448 | Msa0270820:CDS |
| TCAGTTCACCAGCAACTCGG+TGG | 0.721739 | 2_3:-2147068 | Msa0270820:CDS |
| CTAGAATTCGGAGAACACCA+AGG | 0.730614 | 2_3:+2147636 | None:intergenic |
| ACATCATCTACAAAACAAGG+AGG | 0.743357 | 2_3:-2145716 | Msa0270820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACAATTTTATTGAAAAAAT+AGG | + | chr2_3:2146856-2146875 | None:intergenic | 10.0% |
| !!! | TACAATTTTTATTATATACT+TGG | - | chr2_3:2147700-2147719 | Msa0270820:CDS | 10.0% |
| !! | AATTAAAAGAAAATCACAAA+AGG | + | chr2_3:2145486-2145505 | None:intergenic | 15.0% |
| !! | AAATTATACAGAAAATAAGA+AGG | + | chr2_3:2146086-2146105 | None:intergenic | 15.0% |
| !!! | CTTATTTTCTGTATAATTTT+TGG | - | chr2_3:2146087-2146106 | Msa0270820:intron | 15.0% |
| !! | TCTAAAAAAGAATATATACA+AGG | + | chr2_3:2147001-2147020 | None:intergenic | 15.0% |
| !!! | TGTATATATTCTTTTTTAGA+TGG | - | chr2_3:2147001-2147020 | Msa0270820:CDS | 15.0% |
| !! | GCGATTTAAAAACAAATAAA+AGG | + | chr2_3:2145383-2145402 | None:intergenic | 20.0% |
| !! | GGACACATAATATATAAAAA+GGG | + | chr2_3:2145901-2145920 | None:intergenic | 20.0% |
| !! | TGGACACATAATATATAAAA+AGG | + | chr2_3:2145902-2145921 | None:intergenic | 20.0% |
| !!! | TTCTGTATAATTTTTGGAAA+TGG | - | chr2_3:2146093-2146112 | Msa0270820:intron | 20.0% |
| !! | AATTAGATCATATCAAGAAA+TGG | - | chr2_3:2146187-2146206 | Msa0270820:intron | 20.0% |
| !! | ATTGTTAGTATATAGATGTA+AGG | - | chr2_3:2146634-2146653 | Msa0270820:intron | 20.0% |
| !! | TTGTTAGTATATAGATGTAA+GGG | - | chr2_3:2146635-2146654 | Msa0270820:intron | 20.0% |
| !! | ATGATGAAAAAAAACTTCTA+TGG | - | chr2_3:2146970-2146989 | Msa0270820:CDS | 20.0% |
| !! | ATGCAATTAGTAAACTATAA+GGG | + | chr2_3:2147194-2147213 | None:intergenic | 20.0% |
| !! | TATGCAATTAGTAAACTATA+AGG | + | chr2_3:2147195-2147214 | None:intergenic | 20.0% |
| !! | GATAATATCTTAAAAAAGCA+TGG | - | chr2_3:2147384-2147403 | Msa0270820:CDS | 20.0% |
| !! | AGAAAGCTGTTAATATTAAA+CGG | - | chr2_3:2147524-2147543 | Msa0270820:CDS | 20.0% |
| !! | TTCAACTTTCAAATTAAACT+CGG | + | chr2_3:2147602-2147621 | None:intergenic | 20.0% |
| !! | TTCTCAATGTTTTCACAATT+GGG | + | chr2_3:2144705-2144724 | None:intergenic | 25.0% |
| !! | ATTCTCAATGTTTTCACAAT+TGG | + | chr2_3:2144706-2144725 | None:intergenic | 25.0% |
| !! | TCATCAATGTTTTCACAATT+GGG | + | chr2_3:2144783-2144802 | None:intergenic | 25.0% |
| !! | ATCATCAATGTTTTCACAAT+TGG | + | chr2_3:2144784-2144803 | None:intergenic | 25.0% |
| ! | TTTAAATAAACTGACAGTTG+AGG | - | chr2_3:2144983-2145002 | Msa0270820:CDS | 25.0% |
| !!! | ATTCTAGGACAATAAAAGTA+AGG | - | chr2_3:2145102-2145121 | Msa0270820:intron | 25.0% |
| ! | TTAAGGATCATGAAATTGTT+TGG | - | chr2_3:2145243-2145262 | Msa0270820:intron | 25.0% |
| ! | GTAGTTTAAGAATTCTTAGA+TGG | - | chr2_3:2145992-2146011 | Msa0270820:intron | 25.0% |
| !!! | AGATGTTCTTATTTGGTTTT+TGG | - | chr2_3:2146049-2146068 | Msa0270820:intron | 25.0% |
| ! | TGATCTATCTATACTTGTTT+AGG | - | chr2_3:2146143-2146162 | Msa0270820:intron | 25.0% |
| ! | ATCTTCATAGACAAATCAAT+GGG | + | chr2_3:2146434-2146453 | None:intergenic | 25.0% |
| ! | AATCTTCATAGACAAATCAA+TGG | + | chr2_3:2146435-2146454 | None:intergenic | 25.0% |
| ! | TAATAAGTTGTGCATAGAAT+TGG | - | chr2_3:2146472-2146491 | Msa0270820:CDS | 25.0% |
| ! | TGTTAGTATATAGATGTAAG+GGG | - | chr2_3:2146636-2146655 | Msa0270820:intron | 25.0% |
| ! | CAATTAGTTAGTTAGTTAGT+TGG | - | chr2_3:2146685-2146704 | Msa0270820:intron | 25.0% |
| !!! | TTATTTAAAGACTTGCTGAT+AGG | + | chr2_3:2146735-2146754 | None:intergenic | 25.0% |
| !! | TGTTCATTCTTTTCAATTAG+TGG | - | chr2_3:2146872-2146891 | Msa0270820:CDS | 25.0% |
| !! | GTTCATTCTTTTCAATTAGT+GGG | - | chr2_3:2146873-2146892 | Msa0270820:CDS | 25.0% |
| ! | GATGTTATGAATTCACAAAT+TGG | - | chr2_3:2146911-2146930 | Msa0270820:CDS | 25.0% |
| !! | GAATGATTTGTATTTGATCA+AGG | + | chr2_3:2147046-2147065 | None:intergenic | 25.0% |
| ! | TCAATCTTCTTTAAACAGAA+TGG | - | chr2_3:2147299-2147318 | Msa0270820:CDS | 25.0% |
| !! | TGCATGTTTTCAAATGTTAA+CGG | + | chr2_3:2147560-2147579 | None:intergenic | 25.0% |
| ! | TCAACTTTCAAATTAAACTC+GGG | + | chr2_3:2147601-2147620 | None:intergenic | 25.0% |
| ! | TAATTTGAAAGTTGAAAGTG+AGG | - | chr2_3:2147606-2147625 | Msa0270820:CDS | 25.0% |
| ! | AATTTGAAAGTTGAAAGTGA+GGG | - | chr2_3:2147607-2147626 | Msa0270820:CDS | 25.0% |
| ! | TAACCAAAGCTAAAAACTAT+TGG | + | chr2_3:2147682-2147701 | None:intergenic | 25.0% |
| !! | TTATATACTTGGCTTTCAAA+TGG | - | chr2_3:2147711-2147730 | Msa0270820:CDS | 25.0% |
| ! | AGTTTGTTCTGAATTCGATT+TGG | + | chr2_3:2144397-2144416 | None:intergenic | 30.0% |
| AAATCGAATTCAGAACAAAC+TGG | - | chr2_3:2144396-2144415 | Msa0270820:three_prime_UTR | 30.0% | |
| CATGCATTTGAACTAGAATT+CGG | + | chr2_3:2144456-2144475 | None:intergenic | 30.0% | |
| TAACAAAAGCAATAACCTAC+AGG | - | chr2_3:2144536-2144555 | Msa0270820:three_prime_UTR | 30.0% | |
| ACTCTTAATGGAAGTGAAAA+CGG | - | chr2_3:2144579-2144598 | Msa0270820:CDS | 30.0% | |
| ! | TGTTTTCACAATTGGGTTTT+GGG | + | chr2_3:2144698-2144717 | None:intergenic | 30.0% |
| ! | ATGTTTTCACAATTGGGTTT+TGG | + | chr2_3:2144699-2144718 | None:intergenic | 30.0% |
| TGTGAAAACATTGAGAATGA+AGG | - | chr2_3:2144708-2144727 | Msa0270820:CDS | 30.0% | |
| ! | TGTTTTCACAATTGGGTTTT+GGG | + | chr2_3:2144698-2144717 | None:intergenic | 30.0% |
| ! | ATGTTTTCACAATTGGGTTT+TGG | + | chr2_3:2144699-2144718 | None:intergenic | 30.0% |
| !! | TGTGAAAACATTGATGATGA+AGG | - | chr2_3:2144786-2144805 | Msa0270820:intron | 30.0% |
| TGTCCTAGAATGATTCAAAA+GGG | + | chr2_3:2145093-2145112 | None:intergenic | 30.0% | |
| TTGTCCTAGAATGATTCAAA+AGG | + | chr2_3:2145094-2145113 | None:intergenic | 30.0% | |
| TAGGACAATAAAAGTAAGGA+GGG | - | chr2_3:2145106-2145125 | Msa0270820:intron | 30.0% | |
| GTATTCATAATGACAACCAT+TGG | + | chr2_3:2145272-2145291 | None:intergenic | 30.0% | |
| TATGAATACGAAATATGAGC+AGG | - | chr2_3:2145283-2145302 | Msa0270820:intron | 30.0% | |
| AAAAGGACTAAGACTCTTAT+AGG | + | chr2_3:2145469-2145488 | None:intergenic | 30.0% | |
| CTTTCCACAAGATGAAAAAT+TGG | + | chr2_3:2145922-2145941 | None:intergenic | 30.0% | |
| ! | TTTTCATCTTGTGGAAAGAT+TGG | - | chr2_3:2145924-2145943 | Msa0270820:intron | 30.0% |
| TTTCATCTTGTGGAAAGATT+GGG | - | chr2_3:2145925-2145944 | Msa0270820:intron | 30.0% | |
| TACTTCTCTCTATTTCACTA+AGG | - | chr2_3:2146017-2146036 | Msa0270820:intron | 30.0% | |
| ACTTCTCTCTATTTCACTAA+GGG | - | chr2_3:2146018-2146037 | Msa0270820:intron | 30.0% | |
| ! | TGGTGTTAGATGTTCTTATT+TGG | - | chr2_3:2146042-2146061 | Msa0270820:intron | 30.0% |
| AAGATTAAGCACATCAATGA+TGG | - | chr2_3:2146218-2146237 | Msa0270820:intron | 30.0% | |
| AGAACATCATCTACAAAACA+AGG | - | chr2_3:2146358-2146377 | Msa0270820:CDS | 30.0% | |
| !! | TAGTTGGTTAGTTTGTTATG+TGG | - | chr2_3:2146701-2146720 | Msa0270820:intron | 30.0% |
| GTCTTTAAATAACCCTCAAT+TGG | - | chr2_3:2146743-2146762 | Msa0270820:intron | 30.0% | |
| TGAATTCATAACATCCATAC+CGG | + | chr2_3:2146906-2146925 | None:intergenic | 30.0% | |
| !!! | CACAAATTGGTTTTCTTTCT+TGG | - | chr2_3:2146924-2146943 | Msa0270820:CDS | 30.0% |
| !!! | AGCTTTCTTTTTGTCACTTT+TGG | - | chr2_3:2147217-2147236 | Msa0270820:CDS | 30.0% |
| CAAGATTGAATCTTACATAC+TGG | + | chr2_3:2147260-2147279 | None:intergenic | 30.0% | |
| ! | GCATGTTTTCAAATGTTAAC+GGG | + | chr2_3:2147559-2147578 | None:intergenic | 30.0% |
| TATTGGAACTAGTCAAAATG+GGG | + | chr2_3:2147665-2147684 | None:intergenic | 30.0% | |
| CTATTGGAACTAGTCAAAAT+GGG | + | chr2_3:2147666-2147685 | None:intergenic | 30.0% | |
| ACTATTGGAACTAGTCAAAA+TGG | + | chr2_3:2147667-2147686 | None:intergenic | 30.0% | |
| !!! | GTTCCAATAGTTTTTAGCTT+TGG | - | chr2_3:2147676-2147695 | Msa0270820:CDS | 30.0% |
| !! | AAAAGCATCAACGCTTTCTT+CGG | + | chr2_3:2144304-2144323 | None:intergenic | 35.0% |
| !! | TTCTGAATTCGATTTGGTGT+CGG | + | chr2_3:2144391-2144410 | None:intergenic | 35.0% |
| !! | CGAATTCTAGTTCAAATGCA+TGG | - | chr2_3:2144454-2144473 | Msa0270820:three_prime_UTR | 35.0% |
| TTCAGCTTCTGGATCAAATT+TGG | + | chr2_3:2144486-2144505 | None:intergenic | 35.0% | |
| CTGAAAAAGAGGGGTTATAA+TGG | - | chr2_3:2144501-2144520 | Msa0270820:three_prime_UTR | 35.0% | |
| GATTCTCCAAAGACTCTTAA+TGG | - | chr2_3:2144567-2144586 | Msa0270820:CDS | 35.0% | |
| TCACTTCCATTAAGAGTCTT+TGG | + | chr2_3:2144576-2144595 | None:intergenic | 35.0% | |
| GTATCAACTTCAACACAATG+AGG | + | chr2_3:2144627-2144646 | None:intergenic | 35.0% | |
| ! | GTTTTCACAATTGGGTTTTG+GGG | + | chr2_3:2144697-2144716 | None:intergenic | 35.0% |
| ! | ATGTTTTCACAGTTGGGTTT+CGG | + | chr2_3:2144738-2144757 | None:intergenic | 35.0% |
| ! | TGATTTCACGTTGAGGTTTT+CGG | + | chr2_3:2144815-2144834 | None:intergenic | 35.0% |
| !! | TCATCATTGATTTCACGTTG+AGG | + | chr2_3:2144822-2144841 | None:intergenic | 35.0% |
| GTCCTAGAATGATTCAAAAG+GGG | + | chr2_3:2145092-2145111 | None:intergenic | 35.0% | |
| CTAGGACAATAAAAGTAAGG+AGG | - | chr2_3:2145105-2145124 | Msa0270820:intron | 35.0% | |
| GGGTCTCGATAATAAAGTTA+AGG | - | chr2_3:2145226-2145245 | Msa0270820:intron | 35.0% | |
| TTCATAATGACAACCATTGG+AGG | + | chr2_3:2145269-2145288 | None:intergenic | 35.0% | |
| TGAGCAGGATGAAAATAACA+AGG | - | chr2_3:2145298-2145317 | Msa0270820:intron | 35.0% | |
| CTTGATTGCTTCAGTGATTA+CGG | - | chr2_3:2145584-2145603 | Msa0270820:intron | 35.0% | |
| AAATCAAAACACTCATCCCT+CGG | + | chr2_3:2145649-2145668 | None:intergenic | 35.0% | |
| ! | ATTTTTGAACCATCTGTAGC+AGG | - | chr2_3:2145665-2145684 | Msa0270820:intron | 35.0% |
| TCTAAATAACCTGCTACAGA+TGG | + | chr2_3:2145677-2145696 | None:intergenic | 35.0% | |
| TACAAGCATTTCAAAGAGCA+AGG | - | chr2_3:2145710-2145729 | Msa0270820:intron | 35.0% | |
| ! | GTGTCCAATTTTTCATCTTG+TGG | - | chr2_3:2145915-2145934 | Msa0270820:CDS | 35.0% |
| TTCATCTTGTGGAAAGATTG+GGG | - | chr2_3:2145926-2145945 | Msa0270820:intron | 35.0% | |
| TTTGAAGATGACAACTGCTT+TGG | - | chr2_3:2145970-2145989 | Msa0270820:intron | 35.0% | |
| TCAACAGCTTGACATTTGTA+AGG | - | chr2_3:2146244-2146263 | Msa0270820:intron | 35.0% | |
| ACATCATCTACAAAACAAGG+AGG | - | chr2_3:2146361-2146380 | Msa0270820:CDS | 35.0% | |
| !! | TTTGCTGTTTACCCTCAATA+CGG | + | chr2_3:2146510-2146529 | None:intergenic | 35.0% |
| TATTGAGGGTAAACAGCAAA+AGG | - | chr2_3:2146510-2146529 | Msa0270820:CDS | 35.0% | |
| AGATGTAAGGGGAATTATAG+TGG | - | chr2_3:2146647-2146666 | Msa0270820:intron | 35.0% | |
| AAGGGGAATTATAGTGGTTA+AGG | - | chr2_3:2146653-2146672 | Msa0270820:intron | 35.0% | |
| AGGGGAATTATAGTGGTTAA+GGG | - | chr2_3:2146654-2146673 | Msa0270820:intron | 35.0% | |
| AATAACCCTCAATTGGTAGA+AGG | - | chr2_3:2146750-2146769 | Msa0270820:intron | 35.0% | |
| ATAACCCTCAATTGGTAGAA+GGG | - | chr2_3:2146751-2146770 | Msa0270820:intron | 35.0% | |
| !! | TTGGTTTTCTTTCTTGGTTC+TGG | - | chr2_3:2146930-2146949 | Msa0270820:CDS | 35.0% |
| TCATCAATCAATAGCTGCAA+AGG | - | chr2_3:2147064-2147083 | Msa0270820:CDS | 35.0% | |
| !!! | TTTTGGAACCCATAACTATG+TGG | - | chr2_3:2147234-2147253 | Msa0270820:CDS | 35.0% |
| TTTCATGAAGTCTCAAGACA+AGG | - | chr2_3:2147335-2147354 | Msa0270820:CDS | 35.0% | |
| TTTGAAAACATGCAGAGAAG+TGG | - | chr2_3:2147566-2147585 | Msa0270820:CDS | 35.0% | |
| CAAAATGGGGAACAATACTT+TGG | + | chr2_3:2147652-2147671 | None:intergenic | 35.0% | |
| CTATACACAGTTTCCAGCTT+TGG | + | chr2_3:2144327-2144346 | None:intergenic | 40.0% | |
| GAAACTGTGTATAGAGTGAC+CGG | - | chr2_3:2144333-2144352 | Msa0270820:three_prime_UTR | 40.0% | |
| CGGCTGATTGAATTTGTAAC+CGG | + | chr2_3:2144355-2144374 | None:intergenic | 40.0% | |
| !! | TCTGAATTCGATTTGGTGTC+GGG | + | chr2_3:2144390-2144409 | None:intergenic | 40.0% |
| GCTTCTGGATCAAATTTGGT+TGG | + | chr2_3:2144482-2144501 | None:intergenic | 40.0% | |
| TGATCCAGAAGCTGAAAAAG+AGG | - | chr2_3:2144490-2144509 | Msa0270820:three_prime_UTR | 40.0% | |
| GATCCAGAAGCTGAAAAAGA+GGG | - | chr2_3:2144491-2144510 | Msa0270820:three_prime_UTR | 40.0% | |
| ATCCAGAAGCTGAAAAAGAG+GGG | - | chr2_3:2144492-2144511 | Msa0270820:three_prime_UTR | 40.0% | |
| !! | TTGCTTTTGTTAACCAGTCC+TGG | + | chr2_3:2144528-2144547 | None:intergenic | 40.0% |
| ! | TGGAAGTGAAAACGGAGTTT+TGG | - | chr2_3:2144587-2144606 | Msa0270820:CDS | 40.0% |
| ! | AGTTGATACAGCTCCATCTA+AGG | - | chr2_3:2144638-2144657 | Msa0270820:CDS | 40.0% |
| ! | TGTTTTCACAGTTGGGTTTC+GGG | + | chr2_3:2144737-2144756 | None:intergenic | 40.0% |
| ACCCAACTGTGAAAACATTG+AGG | - | chr2_3:2144740-2144759 | Msa0270820:CDS | 40.0% | |
| ! | CCCTCAATGTTTTCACAGTT+GGG | + | chr2_3:2144744-2144763 | None:intergenic | 40.0% |
| CCCAACTGTGAAAACATTGA+GGG | - | chr2_3:2144741-2144760 | Msa0270820:CDS | 40.0% | |
| ! | ACCCTCAATGTTTTCACAGT+TGG | + | chr2_3:2144745-2144764 | None:intergenic | 40.0% |
| TGTGAAAACATTGAGGGTGA+AGG | - | chr2_3:2144747-2144766 | Msa0270820:CDS | 40.0% | |
| GCAAGAAGAGTAAGTGGTTT+AGG | - | chr2_3:2144946-2144965 | Msa0270820:CDS | 40.0% | |
| ! | AGCCCCTTTTGAATCATTCT+AGG | - | chr2_3:2145087-2145106 | Msa0270820:intron | 40.0% |
| !!! | TCGAGCGTTTTCTGAAACTT+TGG | - | chr2_3:2145139-2145158 | Msa0270820:intron | 40.0% |
| !!! | AGCGTTTTCTGAAACTTTGG+AGG | - | chr2_3:2145142-2145161 | Msa0270820:intron | 40.0% |
| TGAAATTGTTTGGCCTCCAA+TGG | - | chr2_3:2145253-2145272 | Msa0270820:intron | 40.0% | |
| TACACATTGCAGCTAGTTGT+TGG | - | chr2_3:2145404-2145423 | Msa0270820:intron | 40.0% | |
| TCAGTGAGGTTAAACTACAG+AGG | + | chr2_3:2145525-2145544 | None:intergenic | 40.0% | |
| CACTACAATTCAACTCAGTG+AGG | + | chr2_3:2145539-2145558 | None:intergenic | 40.0% | |
| ! | CTCACTGAGTTGAATTGTAG+TGG | - | chr2_3:2145537-2145556 | Msa0270820:intron | 40.0% |
| !! | TGAGTTGAATTGTAGTGGAC+AGG | - | chr2_3:2145542-2145561 | Msa0270820:intron | 40.0% |
| !! | TGAATTGTAGTGGACAGGAA+TGG | - | chr2_3:2145547-2145566 | Msa0270820:intron | 40.0% |
| !! | GAATTGTAGTGGACAGGAAT+GGG | - | chr2_3:2145548-2145567 | Msa0270820:intron | 40.0% |
| !! | AATTGTAGTGGACAGGAATG+GGG | - | chr2_3:2145549-2145568 | Msa0270820:intron | 40.0% |
| CGTAATCACTGAAGCAATCA+AGG | + | chr2_3:2145586-2145605 | None:intergenic | 40.0% | |
| TCAAAGAGCAAGGAAGAGAT+AGG | - | chr2_3:2145720-2145739 | Msa0270820:CDS | 40.0% | |
| CAAAGAGCAAGGAAGAGATA+GGG | - | chr2_3:2145721-2145740 | Msa0270820:CDS | 40.0% | |
| TGTAAGAATCCATTTGTCCC+AGG | - | chr2_3:2145758-2145777 | Msa0270820:CDS | 40.0% | |
| ! | GATGTTTTCAACAAGCACTC+TGG | - | chr2_3:2145827-2145846 | Msa0270820:CDS | 40.0% |
| CTCTCTATTTCACTAAGGGA+TGG | - | chr2_3:2146022-2146041 | Msa0270820:intron | 40.0% | |
| TCATCTACAAAACAAGGAGG+AGG | - | chr2_3:2146364-2146383 | Msa0270820:CDS | 40.0% | |
| AGTTGTGCATAGAATTGGTG+AGG | - | chr2_3:2146477-2146496 | Msa0270820:CDS | 40.0% | |
| GTAGCTGCTCGAGTATTTAT+TGG | - | chr2_3:2146585-2146604 | Msa0270820:intron | 40.0% | |
| TAACCCTCAATTGGTAGAAG+GGG | - | chr2_3:2146752-2146771 | Msa0270820:intron | 40.0% | |
| ATTCCCCTTCTACCAATTGA+GGG | + | chr2_3:2146758-2146777 | None:intergenic | 40.0% | |
| GTGACTCTATTGTAGCAGAA+AGG | - | chr2_3:2146821-2146840 | Msa0270820:CDS | 40.0% | |
| !! | TCAATTAGTGGGTTCCTAAC+CGG | - | chr2_3:2146884-2146903 | Msa0270820:CDS | 40.0% |
| ! | TCATAACATCCATACCGGTT+AGG | + | chr2_3:2146901-2146920 | None:intergenic | 40.0% |
| CATACTGGCCACATAGTTAT+GGG | + | chr2_3:2147245-2147264 | None:intergenic | 40.0% | |
| ACATACTGGCCACATAGTTA+TGG | + | chr2_3:2147246-2147265 | None:intergenic | 40.0% | |
| AGTCTCAAGACAAGGATATG+AGG | - | chr2_3:2147343-2147362 | Msa0270820:CDS | 40.0% | |
| GGTTGAACTTGAGAAGGAAT+TGG | - | chr2_3:2147449-2147468 | Msa0270820:CDS | 40.0% | |
| !! | TTGAAAGTGAGGGTTGATGA+GGG | - | chr2_3:2147617-2147636 | Msa0270820:CDS | 40.0% |
| ! | CGTTGATGCTTTTCCAAAGC+TGG | - | chr2_3:2144311-2144330 | Msa0270820:three_prime_UTR | 45.0% |
| CTAGAATTCGGAGAACACCA+AGG | + | chr2_3:2144444-2144463 | None:intergenic | 45.0% | |
| !!! | AACCCCTCTTTTTCAGCTTC+TGG | + | chr2_3:2144497-2144516 | None:intergenic | 45.0% |
| !! | AAGAGGGGTTATAATGGACC+AGG | - | chr2_3:2144507-2144526 | Msa0270820:three_prime_UTR | 45.0% |
| !! | GAGAATCGCTTTTCACCTGT+AGG | + | chr2_3:2144554-2144573 | None:intergenic | 45.0% |
| AGCTCCATCTAAGGATTGCA+AGG | - | chr2_3:2144647-2144666 | Msa0270820:CDS | 45.0% | |
| CCATCCTTGCAATCCTTAGA+TGG | + | chr2_3:2144654-2144673 | None:intergenic | 45.0% | |
| CCATCTAAGGATTGCAAGGA+TGG | - | chr2_3:2144651-2144670 | Msa0270820:CDS | 45.0% | |
| GATGGTCAATGCGATGATGA+AGG | - | chr2_3:2144669-2144688 | Msa0270820:CDS | 45.0% | |
| TACTCTTCTTGCTCCCTTCA+TGG | + | chr2_3:2144938-2144957 | None:intergenic | 45.0% | |
| AAGGGAGCAAGAAGAGTAAG+TGG | - | chr2_3:2144940-2144959 | Msa0270820:CDS | 45.0% | |
| AGATCAGTTCACCAGCAACT+CGG | - | chr2_3:2145006-2145025 | Msa0270820:CDS | 45.0% | |
| TGATACCAATCAATAGCCCC+AGG | + | chr2_3:2145059-2145078 | None:intergenic | 45.0% | |
| ! | GGGGCTATTGATTGGTATCA+TGG | - | chr2_3:2145059-2145078 | Msa0270820:CDS | 45.0% |
| GAGAGGAGCTCCATTGATAA+GGG | - | chr2_3:2145178-2145197 | Msa0270820:intron | 45.0% | |
| AGAGGAGCTCCATTGATAAG+GGG | - | chr2_3:2145179-2145198 | Msa0270820:intron | 45.0% | |
| CAGTGATTACGGTGCATTGA+AGG | - | chr2_3:2145595-2145614 | Msa0270820:intron | 45.0% | |
| TTGAAGGCTCGACACTCATA+TGG | - | chr2_3:2145611-2145630 | Msa0270820:intron | 45.0% | |
| GACACTCATATGGTCCACAT+GGG | - | chr2_3:2145621-2145640 | Msa0270820:intron | 45.0% | |
| AAGGAAGAGATAGGGAAGCT+TGG | - | chr2_3:2145729-2145748 | Msa0270820:CDS | 45.0% | |
| AGGAAGAGATAGGGAAGCTT+GGG | - | chr2_3:2145730-2145749 | Msa0270820:CDS | 45.0% | |
| AAGAATCCATTTGTCCCAGG+CGG | - | chr2_3:2145761-2145780 | Msa0270820:CDS | 45.0% | |
| AAGCCATGTAGCCATAAAGC+TGG | + | chr2_3:2145793-2145812 | None:intergenic | 45.0% | |
| TAGTACGTTCTCGCACAACA+TGG | + | chr2_3:2146337-2146356 | None:intergenic | 45.0% | |
| TGAGGATGCTTTCCGTATTG+AGG | - | chr2_3:2146495-2146514 | Msa0270820:CDS | 45.0% | |
| GAGGATGCTTTCCGTATTGA+GGG | - | chr2_3:2146496-2146515 | Msa0270820:CDS | 45.0% | |
| AAATACTCGAGCAGCTACCA+CGG | + | chr2_3:2146583-2146602 | None:intergenic | 45.0% | |
| GATTCCCCTTCTACCAATTG+AGG | + | chr2_3:2146759-2146778 | None:intergenic | 45.0% | |
| CAAGAAGCGATGTGTGTCAA+TGG | - | chr2_3:2147119-2147138 | Msa0270820:CDS | 45.0% | |
| CAAGGATATGAGGCAATTCG+AGG | - | chr2_3:2147353-2147372 | Msa0270820:CDS | 45.0% | |
| ! | TGTCTCTGAAGAAGAAGCAG+TGG | - | chr2_3:2147418-2147437 | Msa0270820:CDS | 45.0% |
| ! | AGAGCAGGTTGAACTTGAGA+AGG | - | chr2_3:2147443-2147462 | Msa0270820:CDS | 45.0% |
| !! | GTTGAAAGTGAGGGTTGATG+AGG | - | chr2_3:2147616-2147635 | Msa0270820:CDS | 45.0% |
| !! | CCAAGGCATTGGGATCACAT+TGG | + | chr2_3:2144427-2144446 | None:intergenic | 50.0% |
| CCAATGTGATCCCAATGCCT+TGG | - | chr2_3:2144424-2144443 | Msa0270820:three_prime_UTR | 50.0% | |
| ! | TCGGAGAACACCAAGGCATT+GGG | + | chr2_3:2144437-2144456 | None:intergenic | 50.0% |
| TTCGGAGAACACCAAGGCAT+TGG | + | chr2_3:2144438-2144457 | None:intergenic | 50.0% | |
| !! | GGGTTATAATGGACCAGGAC+TGG | - | chr2_3:2144512-2144531 | Msa0270820:three_prime_UTR | 50.0% |
| !! | GATGACACTGACTCAGACAC+CGG | - | chr2_3:2144903-2144922 | Msa0270820:intron | 50.0% |
| ACCGGAGAGAAAAGCCATGA+AGG | - | chr2_3:2144921-2144940 | Msa0270820:intron | 50.0% | |
| ! | CCCTTCATGGCTTTTCTCTC+CGG | + | chr2_3:2144925-2144944 | None:intergenic | 50.0% |
| CCGGAGAGAAAAGCCATGAA+GGG | - | chr2_3:2144922-2144941 | Msa0270820:intron | 50.0% | |
| GGAGAGGAGCTCCATTGATA+AGG | - | chr2_3:2145177-2145196 | Msa0270820:intron | 50.0% | |
| GCTTCACCACCCCTTATCAA+TGG | + | chr2_3:2145191-2145210 | None:intergenic | 50.0% | |
| ATAAGGGGTGGTGAAGCCAA+TGG | - | chr2_3:2145194-2145213 | Msa0270820:intron | 50.0% | |
| !! | TGGTGAAGCCAATGGACTGT+GGG | - | chr2_3:2145202-2145221 | Msa0270820:intron | 50.0% |
| CGACACTCATATGGTCCACA+TGG | - | chr2_3:2145620-2145639 | Msa0270820:intron | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | + | chr2_3:2145863-2145882 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr2_3:2145862-2145881 | None:intergenic | 50.0% | |
| AATACTCGAGCAGCTACCAC+GGG | + | chr2_3:2146582-2146601 | None:intergenic | 50.0% | |
| !! | TAGTGGGTTCCTAACCGGTA+TGG | - | chr2_3:2146889-2146908 | Msa0270820:CDS | 50.0% |
| GTGTCGGGTACTTTGCGACT+CGG | + | chr2_3:2144375-2144394 | None:intergenic | 55.0% | |
| TCAGTTCACCAGCAACTCGG+TGG | - | chr2_3:2145009-2145028 | Msa0270820:CDS | 55.0% | |
| ACGGTCCTGGGGCTATTGAT+TGG | - | chr2_3:2145051-2145070 | Msa0270820:CDS | 55.0% | |
| !! | CTTTGGAGGAAGAGTGCTCG+AGG | - | chr2_3:2145156-2145175 | Msa0270820:intron | 55.0% |
| GGAGCTCCATTGATAAGGGG+TGG | - | chr2_3:2145182-2145201 | Msa0270820:intron | 55.0% | |
| !! | GTGGTGAAGCCAATGGACTG+TGG | - | chr2_3:2145201-2145220 | Msa0270820:intron | 55.0% |
| !! | TGAAGCCAATGGACTGTGGG+AGG | - | chr2_3:2145205-2145224 | Msa0270820:intron | 55.0% |
| !! | GAAGCCAATGGACTGTGGGA+GGG | - | chr2_3:2145206-2145225 | Msa0270820:intron | 55.0% |
| ! | GCGCCAGCTTTATGGCTACA+TGG | - | chr2_3:2145787-2145806 | Msa0270820:CDS | 55.0% |
| ACATGTCTTCCGATGTCCCG+TGG | - | chr2_3:2146563-2146582 | Msa0270820:intron | 55.0% | |
| GAAGAAGCAGTGGCAAGAGC+AGG | - | chr2_3:2147428-2147447 | Msa0270820:CDS | 55.0% | |
| CACTGCCCAGCATGCCAAGA+CGG | - | chr2_3:2145032-2145051 | Msa0270820:CDS | 60.0% | |
| CAGGACCGTCTTGGCATGCT+GGG | + | chr2_3:2145040-2145059 | None:intergenic | 60.0% | |
| CAGCATGCCAAGACGGTCCT+GGG | - | chr2_3:2145039-2145058 | Msa0270820:CDS | 60.0% | |
| AGCATGCCAAGACGGTCCTG+GGG | - | chr2_3:2145040-2145059 | Msa0270820:CDS | 60.0% | |
| CAATAGCCCCAGGACCGTCT+TGG | + | chr2_3:2145049-2145068 | None:intergenic | 60.0% | |
| !! | GAGGAAGAGTGCTCGAGGAG+AGG | - | chr2_3:2145161-2145180 | Msa0270820:intron | 60.0% |
| GAGACCCTCCCACAGTCCAT+TGG | + | chr2_3:2145213-2145232 | None:intergenic | 60.0% | |
| ! | TATGGTCCACATGGGCACCG+AGG | - | chr2_3:2145629-2145648 | Msa0270820:intron | 60.0% |
| !! | ATGGTCCACATGGGCACCGA+GGG | - | chr2_3:2145630-2145649 | Msa0270820:intron | 60.0% |
| CGCTTTCCGCCTGGGACAAA+TGG | + | chr2_3:2145770-2145789 | None:intergenic | 60.0% | |
| AAAGCTGGCGCTTTCCGCCT+GGG | + | chr2_3:2145778-2145797 | None:intergenic | 60.0% | |
| TAAAGCTGGCGCTTTCCGCC+TGG | + | chr2_3:2145779-2145798 | None:intergenic | 60.0% | |
| !! | GGCGGAAAGCGCCAGCTTTA+TGG | - | chr2_3:2145779-2145798 | Msa0270820:CDS | 60.0% |
| GAGCAGCTACCACGGGACAT+CGG | + | chr2_3:2146575-2146594 | None:intergenic | 60.0% | |
| CCAGGACCGTCTTGGCATGC+TGG | + | chr2_3:2145041-2145060 | None:intergenic | 65.0% | |
| CCAGCATGCCAAGACGGTCC+TGG | - | chr2_3:2145038-2145057 | Msa0270820:CDS | 65.0% | |
| !! | CTCATCCCTCGGTGCCCATG+TGG | + | chr2_3:2145638-2145657 | None:intergenic | 65.0% |
| GGGCAGTGCCACCGAGTTGC+TGG | + | chr2_3:2145020-2145039 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 2144297 | 2147802 | 2144297 | ID=Msa0270820;Name=Msa0270820 |
| chr2_3 | mRNA | 2144297 | 2147802 | 2144297 | ID=Msa0270820-mRNA-1;Parent=Msa0270820;Name=Msa0270820-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.4|1|1|1|5|266|636 |
| chr2_3 | exon | 2144297 | 2144782 | 2144297 | ID=Msa0270820-mRNA-1:exon:1050;Parent=Msa0270820-mRNA-1 |
| chr2_3 | exon | 2144925 | 2145079 | 2144925 | ID=Msa0270820-mRNA-1:exon:1049;Parent=Msa0270820-mRNA-1 |
| chr2_3 | exon | 2145714 | 2145934 | 2145714 | ID=Msa0270820-mRNA-1:exon:1048;Parent=Msa0270820-mRNA-1 |
| chr2_3 | exon | 2146251 | 2146542 | 2146251 | ID=Msa0270820-mRNA-1:exon:1047;Parent=Msa0270820-mRNA-1 |
| chr2_3 | exon | 2146780 | 2147802 | 2146780 | ID=Msa0270820-mRNA-1:exon:1046;Parent=Msa0270820-mRNA-1 |
| chr2_3 | CDS | 2146780 | 2147802 | 2146780 | ID=Msa0270820-mRNA-1:cds;Parent=Msa0270820-mRNA-1 |
| chr2_3 | CDS | 2146251 | 2146542 | 2146251 | ID=Msa0270820-mRNA-1:cds;Parent=Msa0270820-mRNA-1 |
| chr2_3 | CDS | 2145714 | 2145934 | 2145714 | ID=Msa0270820-mRNA-1:cds;Parent=Msa0270820-mRNA-1 |
| chr2_3 | CDS | 2144925 | 2145079 | 2144925 | ID=Msa0270820-mRNA-1:cds;Parent=Msa0270820-mRNA-1 |
| chr2_3 | CDS | 2144563 | 2144782 | 2144563 | ID=Msa0270820-mRNA-1:cds;Parent=Msa0270820-mRNA-1 |
| chr2_3 | three_prime_UTR | 2144297 | 2144562 | 2144297 | ID=Msa0270820-mRNA-1:three_prime_utr;Parent=Msa0270820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
