AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0277560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277560 MtrunA17_Chr2g0286151 98.133 482 5 1 1 478 1 482 0.0 939
Msa0277560 MtrunA17_Chr4g0066941 67.012 482 119 6 11 460 18 491 0.0 545
Msa0277560 MtrunA17_Chr1g0195891 49.862 363 148 10 1 349 1 343 1.46e-97 297
Msa0277560 MtrunA17_Chr7g0249221 42.079 404 195 12 26 413 8 388 2.85e-93 289
Msa0277560 MtrunA17_Chr7g0249221 29.193 161 57 3 12 115 190 350 3.08e-12 68.2
Msa0277560 MtrunA17_Chr5g0438891 38.012 342 173 13 40 379 36 340 9.47e-61 204
Msa0277560 MtrunA17_Chr5g0438891 44.578 83 45 1 38 120 76 157 2.82e-18 86.7
Msa0277560 MtrunA17_Chr5g0438891 40.964 83 47 1 33 115 255 335 3.40e-13 71.2
Msa0277560 MtrunA17_Chr3g0116431 34.659 352 178 10 35 375 166 476 1.87e-55 192
Msa0277560 MtrunA17_Chr4g0058011 34.085 355 178 11 36 378 227 537 1.72e-52 186
Msa0277560 MtrunA17_Chr8g0356241 29.428 367 197 14 40 374 138 474 6.53e-30 122
Msa0277560 MtrunA17_Chr8g0356241 35.465 172 75 3 38 178 188 354 2.24e-28 117
Msa0277560 MtrunA17_Chr8g0356241 32.018 228 98 4 3 173 258 485 2.95e-27 114
Msa0277560 MtrunA17_Chr1g0195901 57.143 77 30 2 378 454 1 74 1.24e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277560 AT5G18550.1 51.277 470 199 13 11 469 15 465 2.58e-137 404
Msa0277560 AT5G18550.4 53.258 445 178 13 11 444 15 440 1.03e-136 402
Msa0277560 AT3G06410.1 56.391 399 154 8 8 395 12 401 2.00e-132 391
Msa0277560 AT5G18550.3 51.936 439 185 12 38 469 14 433 1.89e-131 387
Msa0277560 AT2G47850.1 50.805 435 196 10 15 449 18 434 2.85e-131 388
Msa0277560 AT2G47850.3 50.805 435 196 10 15 449 18 434 2.85e-131 388
Msa0277560 AT5G18550.2 49.574 470 194 13 11 469 15 452 1.13e-129 384
Msa0277560 AT2G47850.2 46.437 435 189 11 15 449 18 408 2.40e-108 329
Msa0277560 AT3G02830.1 41.316 380 173 10 26 390 18 362 2.46e-87 273
Msa0277560 AT3G02830.2 41.645 377 170 10 29 390 1 342 7.62e-87 271
Msa0277560 AT5G16540.1 40.811 370 149 11 26 386 19 327 4.30e-81 256
Msa0277560 AT5G16540.1 38.144 97 60 0 22 118 222 318 2.94e-15 77.8
Msa0277560 AT5G16540.3 41.144 367 146 11 29 386 1 306 5.34e-81 255
Msa0277560 AT5G16540.3 38.144 97 60 0 22 118 201 297 2.65e-15 77.8
Msa0277560 AT2G47850.4 47.546 326 156 7 124 449 2 312 1.02e-76 244
Msa0277560 AT2G47850.4 41.304 92 54 0 37 128 161 252 1.62e-16 81.3
Msa0277560 AT5G16540.2 39.189 370 148 12 26 386 19 320 6.80e-74 238
Msa0277560 AT5G16540.2 35.294 102 49 2 22 118 222 311 9.62e-14 73.2
Msa0277560 AT5G16540.4 39.755 327 133 9 29 349 1 269 3.83e-64 209
Msa0277560 AT5G63260.1 34.015 391 184 13 20 390 85 421 6.33e-58 197
Msa0277560 AT5G63260.2 32.593 405 187 13 20 390 85 437 6.44e-55 190
Msa0277560 AT3G48440.1 34.807 362 199 11 37 391 104 435 3.54e-54 188
Msa0277560 AT1G04990.1 32.884 371 187 9 21 387 34 346 1.29e-53 185
Msa0277560 AT1G04990.6 32.884 371 187 9 21 387 34 346 1.29e-53 185
Msa0277560 AT1G04990.2 32.884 371 187 9 21 387 34 346 1.29e-53 185
Msa0277560 AT1G04990.5 31.536 371 172 10 21 387 34 326 5.83e-48 170
Msa0277560 AT2G32930.2 31.316 380 206 11 40 411 41 373 1.51e-45 165
Msa0277560 AT2G32930.2 43.038 79 44 1 37 115 82 159 2.48e-15 78.6
Msa0277560 AT2G32930.3 31.316 380 206 11 40 411 14 346 1.60e-45 164
Msa0277560 AT2G32930.3 43.038 79 44 1 37 115 55 132 1.97e-15 78.6
Msa0277560 AT2G32930.1 31.053 380 203 12 40 411 41 369 2.18e-41 154
Msa0277560 AT3G12680.1 32.133 361 187 13 40 374 171 499 7.01e-41 154
Msa0277560 AT3G12680.1 35.610 205 96 5 38 212 220 418 2.32e-32 129
Msa0277560 AT3G12680.1 40.476 168 58 5 41 167 338 504 2.33e-29 121
Msa0277560 AT3G12680.1 33.871 186 64 5 37 163 262 447 2.12e-24 106
Msa0277560 AT3G12680.1 41.000 100 45 2 39 124 416 515 2.33e-18 88.2
Msa0277560 AT1G04990.3 30.405 296 156 7 96 387 16 265 5.47e-32 125
Msa0277560 AT1G04990.3 39.437 71 42 1 46 116 12 81 9.18e-14 72.8
Msa0277560 AT1G04990.3 43.421 76 42 1 88 163 179 253 7.21e-13 70.1
Msa0277560 AT1G04990.4 28.716 296 141 8 96 387 16 245 1.18e-26 109
Msa0277560 AT1G04990.4 42.424 66 37 1 51 116 17 81 1.20e-13 72.0
Msa0277560 AT1G48195.1 46.753 77 40 1 85 161 5 80 3.14e-17 77.0
Msa0277560 AT1G48195.1 42.308 78 45 0 296 373 3 80 3.01e-16 73.9
Msa0277560 AT1G48195.1 35.897 78 50 0 37 114 3 80 2.11e-11 60.5

Find 218 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGCTCCACACAGCTTTA+TGG 0.148543 2_3:-10146068 Msa0277560:CDS
CCTCCTTGAATAATGATATT+TGG 0.185540 2_3:+10142502 None:intergenic
CTTCACATTGTTATGTTATA+TGG 0.187358 2_3:-10142015 Msa0277560:three_prime_UTR
GGACCTTCTTCACAACAAAT+TGG 0.188676 2_3:-10146338 Msa0277560:CDS
AGGACAAGATCTTGCAAATT+TGG 0.216539 2_3:-10146762 Msa0277560:CDS
CCATCCACATCTCCAATATT+TGG 0.224277 2_3:-10142257 Msa0277560:three_prime_UTR
AATTGCTACCTAATTCAAAA+AGG 0.230639 2_3:+10142137 None:intergenic
ATTCAAGGAGGTCGTCAAAT+AGG 0.248236 2_3:-10142490 Msa0277560:three_prime_UTR
TTCTGGCTGGGGTCCTTATC+AGG 0.252628 2_3:-10146225 Msa0277560:intron
CTAAGGACGGCATTCACTTT+TGG 0.274159 2_3:+10145840 None:intergenic
AATGGAATTGCAGATTCTTT+AGG 0.278667 2_3:+10142290 None:intergenic
CGAGTGCTTGATTGAGAAAC+AGG 0.284724 2_3:+10142646 None:intergenic
ACCTGTATTTAATATTTATA+GGG 0.285284 2_3:-10142075 Msa0277560:three_prime_UTR
CCATAATAATTTAGTGAAAC+AGG 0.285617 2_3:+10146687 None:intergenic
AACCTGTATTTAATATTTAT+AGG 0.308915 2_3:-10142076 Msa0277560:three_prime_UTR
GAATGTGGAACTGGGATAAC+TGG 0.314145 2_3:+10142448 None:intergenic
ACAAGCCCTGTACTTCCTTC+TGG 0.315539 2_3:-10146104 Msa0277560:CDS
TTGGCTCCACACAGCTTTAT+GGG 0.316108 2_3:-10146067 Msa0277560:CDS
TAAGGACCCCAGCCAGAAAA+AGG 0.327349 2_3:+10146230 None:intergenic
TCGTTCTGATTTCTGCTTGA+AGG 0.328571 2_3:+10145975 None:intergenic
CCTGTTTCACTAAATTATTA+TGG 0.341570 2_3:-10146687 Msa0277560:CDS
TAATGATACTCTGGTTGATT+AGG 0.346544 2_3:+10145933 None:intergenic
AGGTTATTGGAGCTGCTTCT+AGG 0.346914 2_3:-10147116 Msa0277560:CDS
GACCTTCTTCACAACAAATT+GGG 0.350087 2_3:-10146337 Msa0277560:CDS
GATTCTCAAACCGGTTTAGA+AGG 0.353209 2_3:-10147444 Msa0277560:intron
TGCAGAACCTATGTGGCAAT+TGG 0.353523 2_3:-10147353 Msa0277560:intron
TCTGGTTGATTAGGACTTGC+TGG 0.357396 2_3:+10145942 None:intergenic
GAGCTGCTTCTAGGACTGTT+GGG 0.358371 2_3:-10147107 Msa0277560:CDS
TTCAAGGAGGTCGTCAAATA+GGG 0.365715 2_3:-10142489 Msa0277560:three_prime_UTR
TTTACTGTTGAGAAATAATC+AGG 0.367051 2_3:-10142052 Msa0277560:three_prime_UTR
CAGCGTGGTATATGCAAGTT+TGG 0.367194 2_3:-10142919 Msa0277560:CDS
CCAGTTGCACCCTACTTTGT+GGG 0.372096 2_3:-10142823 Msa0277560:CDS
GAGAGAAAGTGAGGTGTTGT+TGG 0.372177 2_3:+10147617 None:intergenic
GCACAACAGACTCCAAATAT+TGG 0.375865 2_3:+10142245 None:intergenic
GCAGAACCTATGTGGCAATT+GGG 0.384400 2_3:-10147352 Msa0277560:intron
AGCTCCATCGCCGGTTCCCT+CGG 0.385994 2_3:-10146420 Msa0277560:CDS
CATTACCCGGTGAAGGTAGC+TGG 0.387837 2_3:+10146039 None:intergenic
ATTGCTACTTGTCGTGGTAT+TGG 0.389271 2_3:+10142600 None:intergenic
AATGAGAGGTTCCGATGAAA+TGG 0.393509 2_3:+10147546 None:intergenic
TGCACTTACTATTTGAGAAC+TGG 0.397141 2_3:-10147283 Msa0277560:CDS
ACCAGTTGCACCCTACTTTG+TGG 0.400576 2_3:-10142824 Msa0277560:CDS
AATGCCGTCCTTAGCCCTGC+AGG 0.402972 2_3:-10145831 Msa0277560:CDS
CATTCACATTTCTTAATTTG+AGG 0.403952 2_3:+10142567 None:intergenic
TCTAAACCGGTTTGAGAATC+CGG 0.406785 2_3:+10147447 None:intergenic
GTAAGTTCTGGCTGCAACTC+TGG 0.408260 2_3:+10142763 None:intergenic
CCCACAAAGTAGGGTGCAAC+TGG 0.414071 2_3:+10142823 None:intergenic
AGAGAAAGTGAGGTGTTGTT+GGG 0.414360 2_3:+10147618 None:intergenic
GCTAGATCTGAATGTGGAAC+TGG 0.415034 2_3:+10142439 None:intergenic
TCTAAAGCAAGGCGGCTGTA+TGG 0.415167 2_3:+10142319 None:intergenic
TCACCGGGTAATGCCTATAC+TGG 0.417112 2_3:-10146029 Msa0277560:CDS
AACTTACTGCAGGATCCAAC+AGG 0.417918 2_3:-10142747 Msa0277560:CDS
AAAACGGGACAATGCAAGTT+TGG 0.420191 2_3:-10146491 Msa0277560:CDS
AAAAGGAAGCTCCTCTGGTT+TGG 0.424409 2_3:+10145905 None:intergenic
CCATAGGTCCATAGGGGCTC+TGG 0.431128 2_3:+10146273 None:intergenic
ACCCCAATTTGTTGTGAAGA+AGG 0.431547 2_3:+10146335 None:intergenic
GTGCAACTGGTACATCTGTC+AGG 0.431818 2_3:+10142836 None:intergenic
GTTGGCTTGACTTTGCCAAC+TGG 0.431997 2_3:-10142673 Msa0277560:CDS
TTGGATCCTGCAGTAAGTTC+TGG 0.432849 2_3:+10142751 None:intergenic
TAGGACTTCCAAAACAGAAA+TGG 0.433296 2_3:+10142112 None:intergenic
GGAGCTGCTTCTAGGACTGT+TGG 0.436466 2_3:-10147108 Msa0277560:CDS
TTAAATTTAACAGGGTGAAA+AGG 0.445062 2_3:-10146531 Msa0277560:intron
GGAGCAAAAGGAAGCTCCTC+TGG 0.446002 2_3:+10145900 None:intergenic
CAACCAAATATCATTATTCA+AGG 0.446562 2_3:-10142505 Msa0277560:three_prime_UTR
GAAGATAGATTACTCTTCAA+TGG 0.448038 2_3:-10147520 Msa0277560:exon
CCTATGTGGCAATTGGGGTT+AGG 0.448878 2_3:-10147346 Msa0277560:CDS
GAGGGAACCGGCGATGGAGC+TGG 0.451452 2_3:+10146422 None:intergenic
TACTTTGTGGGTTCATCCGT+TGG 0.452836 2_3:-10142811 Msa0277560:CDS
GTTCTCATATGAAAGAAGAT+TGG 0.453505 2_3:+10142211 None:intergenic
CTGTAACTCAGTGGTGCAAT+AGG 0.453647 2_3:+10142874 None:intergenic
ACACATGGTCAATGAAAGTC+TGG 0.455737 2_3:+10142181 None:intergenic
ATAAATATTAAATACAGGTT+GGG 0.458655 2_3:+10142079 None:intergenic
TGTTTGTTTACCTTCTAAAC+CGG 0.458948 2_3:+10147434 None:intergenic
TCATCAGTAAGCACATCAAC+TGG 0.458973 2_3:-10142700 Msa0277560:CDS
CAGGTTGGGAAGTATTGAAT+AGG 0.463903 2_3:+10142093 None:intergenic
GGACGTAACGGAAGCCCTGC+AGG 0.467084 2_3:+10145816 None:intergenic
TTCACAACAAATTGGGGTAC+TGG 0.467303 2_3:-10146330 Msa0277560:CDS
GTGGCTTTGGTTCTAGGTGT+CGG 0.469793 2_3:-10147255 Msa0277560:CDS
ATTTGTACACTAGCAGGAAC+TGG 0.472818 2_3:+10146446 None:intergenic
TCAGTAGCTCCTGTCTGTTT+CGG 0.472843 2_3:+10146717 None:intergenic
GGAGAACCAGAAGGAAGTAC+AGG 0.473748 2_3:+10146098 None:intergenic
ACCCTATAAATATTAAATAC+AGG 0.474157 2_3:+10142074 None:intergenic
TACCTATAAGATGGAGCAAA+AGG 0.476484 2_3:+10145888 None:intergenic
TAAGTGCAATCAACCTCATC+AGG 0.476914 2_3:+10147298 None:intergenic
CTAAAGCAAGGCGGCTGTAT+GGG 0.477236 2_3:+10142320 None:intergenic
GTGGTATTGGCAGGTGCTAA+AGG 0.477705 2_3:+10142613 None:intergenic
ACTGATGACGATATTCTAGA+AGG 0.479935 2_3:+10142715 None:intergenic
TCGTTTGTCCAGAGCCCCTA+TGG 0.481665 2_3:-10146281 Msa0277560:CDS
GTCTGTACGGTTGGATACAA+TGG 0.485124 2_3:+10146368 None:intergenic
TCTGGTTCTCCAGCTAATGT+TGG 0.486127 2_3:-10146086 Msa0277560:CDS
TCTGTACGGTTGGATACAAT+GGG 0.486783 2_3:+10146369 None:intergenic
ACCGGACCGGATTCTCAAAC+CGG 0.487073 2_3:-10147453 Msa0277560:CDS
ACCCTTCCTTTCCATTTCAT+CGG 0.487503 2_3:-10147557 Msa0277560:five_prime_UTR
CCAGAGCCCCTATGGACCTA+TGG 0.489000 2_3:-10146273 Msa0277560:CDS
CCTAACCCCAATTGCCACAT+AGG 0.489648 2_3:+10147346 None:intergenic
TATAAATATTAAATACAGGT+TGG 0.489912 2_3:+10142078 None:intergenic
ACAGGCTGTCCAACACGTTC+AGG 0.492536 2_3:+10147078 None:intergenic
TGTGTGGAGCCAACATTAGC+TGG 0.495140 2_3:+10146077 None:intergenic
AACCTGATCCGTCTTCTCAA+TGG 0.496083 2_3:-10147476 Msa0277560:CDS
ACGGAAGCCCTGCAGGGCTA+AGG 0.497525 2_3:+10145823 None:intergenic
CCAACCGTACAGACTCCATC+TGG 0.498384 2_3:-10146359 Msa0277560:CDS
GGACAATACCATAGGTCCAT+AGG 0.499115 2_3:+10146265 None:intergenic
AGAGAGAGACCAATAAAAGA+AGG 0.500751 2_3:-10147793 None:intergenic
GGATACAATGGGGAAGGTAC+TGG 0.505178 2_3:+10146380 None:intergenic
CTTTGATCTTGAATAAAACA+TGG 0.505754 2_3:-10142365 Msa0277560:three_prime_UTR
ATTCACATTTCTTAATTTGA+GGG 0.507428 2_3:+10142568 None:intergenic
CTACTTGTCGTGGTATTGGC+AGG 0.509824 2_3:+10142604 None:intergenic
TGCAGGGCTTCCGTTACGTC+CGG 0.510700 2_3:-10145814 Msa0277560:intron
GTCCATTGAGAAGACGGATC+AGG 0.511766 2_3:+10147474 None:intergenic
TTGGCTTGACCTACCTGATA+AGG 0.513240 2_3:+10146212 None:intergenic
TTGAAATGCAGTATTATATG+AGG 0.513604 2_3:-10146782 Msa0277560:intron
GACAATACCATAGGTCCATA+GGG 0.514835 2_3:+10146266 None:intergenic
GATAACCCAGCTACCTTCAC+CGG 0.517819 2_3:-10146045 Msa0277560:CDS
GGCTTGACTTTGCCAACTGG+TGG 0.521772 2_3:-10142670 Msa0277560:CDS
TGTTGGACAGCCTGTGTGCC+AGG 0.522566 2_3:-10147070 Msa0277560:intron
GAGGAACCAGAAAATTGATA+AGG 0.522926 2_3:+10146005 None:intergenic
GAAACCGAGGGAACCGGCGA+TGG 0.522946 2_3:+10146416 None:intergenic
AAAGGTGAAACCGAGGGAAC+CGG 0.523526 2_3:+10146410 None:intergenic
GAAGGTACTGGTACATGTAA+AGG 0.528560 2_3:+10146392 None:intergenic
AAATGGAAAGGAAGGGTGGT+TGG 0.531666 2_3:+10147563 None:intergenic
CCAGATGGAGTCTGTACGGT+TGG 0.533223 2_3:+10146359 None:intergenic
AGCACATCAACTGGATCAGT+TGG 0.533767 2_3:-10142691 Msa0277560:CDS
TTAGGAGTTATTCTAAAGCA+AGG 0.534715 2_3:+10142308 None:intergenic
TTTATTCAAGATCAAAGGAA+TGG 0.535890 2_3:+10142371 None:intergenic
TTCCGATGAAATGGAAAGGA+AGG 0.536074 2_3:+10147555 None:intergenic
ATGGGTTGCTAAAGTTCTCA+TGG 0.536241 2_3:+10142338 None:intergenic
CCAAATATTGGAGATGTGGA+TGG 0.543002 2_3:+10142257 None:intergenic
GCTGGAATTTGTACACTAGC+AGG 0.543649 2_3:+10146440 None:intergenic
TATCATCATCCGAAACAGAC+AGG 0.545089 2_3:-10146726 Msa0277560:CDS
TTCACATTTCTTAATTTGAG+GGG 0.545538 2_3:+10142569 None:intergenic
GGATGATCAAATTTGCATGC+AGG 0.545853 2_3:+10142895 None:intergenic
GAAATCATTACCGGACGTAA+CGG 0.546095 2_3:+10145804 None:intergenic
TATATACATACCGGACGTAA+CGG 0.546577 2_3:+10146660 None:intergenic
TGGTACATCTGTCAGGGAAG+AGG 0.547265 2_3:+10142843 None:intergenic
ACGGATGAACCCACAAAGTA+GGG 0.550114 2_3:+10142814 None:intergenic
GACTCCAAATATTGGAGATG+TGG 0.555876 2_3:+10142253 None:intergenic
AGCTGCTTCTAGGACTGTTG+GGG 0.557759 2_3:-10147106 Msa0277560:CDS
GAGAGAGACCAATAAAAGAA+GGG 0.560652 2_3:-10147792 None:intergenic
TTGGAGTAATAATGATACTC+TGG 0.560717 2_3:+10145924 None:intergenic
CATAATAATTTAGTGAAACA+GGG 0.562802 2_3:+10146688 None:intergenic
AAATTGATAAGGTCCAGTAT+AGG 0.563165 2_3:+10146016 None:intergenic
CAGAACCTATGTGGCAATTG+GGG 0.564961 2_3:-10147351 Msa0277560:CDS
GATCCGTCTTCTCAATGGAC+CGG 0.569679 2_3:-10147471 Msa0277560:CDS
TGACAATCAAAAGCTTGACT+TGG 0.573937 2_3:-10141962 Msa0277560:three_prime_UTR
TTATGGATATCCGTTACGTC+CGG 0.574710 2_3:-10146670 Msa0277560:intron
TGTAAAATGCAGAACCTATG+TGG 0.575003 2_3:-10147360 Msa0277560:intron
CTCATCAGGTCGTTGTGGAT+AGG 0.577829 2_3:+10147312 None:intergenic
GTTGAGTGGAGCGAGGAAAG+TGG 0.577852 2_3:+10147496 None:intergenic
ATGCCGTCCTTAGCCCTGCA+GGG 0.582917 2_3:-10145830 Msa0277560:CDS
AACGGATGAACCCACAAAGT+AGG 0.583788 2_3:+10142813 None:intergenic
AATCTATCTTCTAGAATGAG+AGG 0.584529 2_3:+10147532 None:intergenic
GTATAGGCATTACCCGGTGA+AGG 0.585426 2_3:+10146032 None:intergenic
TTTGGTGCACTCATGTCTGG+TGG 0.589030 2_3:+10145858 None:intergenic
AGAAGGAACAGACTCCCTGT+TGG 0.589389 2_3:+10142732 None:intergenic
AACTCTGGTGAAGAAGATGA+AGG 0.589670 2_3:+10142778 None:intergenic
AGGTCCAGATGGAGTCTGTA+CGG 0.593840 2_3:+10146355 None:intergenic
GGTCCGGTCCATTGAGAAGA+CGG 0.594240 2_3:+10147468 None:intergenic
TGAGAAACAGGGCCACCAGT+TGG 0.594435 2_3:+10142658 None:intergenic
AAGCCCTGCAGGGCTAAGGA+CGG 0.594591 2_3:+10145827 None:intergenic
TTGCAGCCAGAACTTACTGC+AGG 0.595785 2_3:-10142757 Msa0277560:CDS
ACCTTCTTCACAACAAATTG+GGG 0.596480 2_3:-10146336 Msa0277560:CDS
GTCTTCTCAATGGACCGGAC+CGG 0.597867 2_3:-10147466 Msa0277560:CDS
ATGTGGCAATTGGGGTTAGG+TGG 0.598261 2_3:-10147343 Msa0277560:CDS
ACCGGTTTGAGAATCCGGTC+CGG 0.598442 2_3:+10147452 None:intergenic
TCTGTCAGGGAAGAGGCAGA+TGG 0.599348 2_3:+10142850 None:intergenic
ATTACCCGGTGAAGGTAGCT+GGG 0.599486 2_3:+10146040 None:intergenic
AAGAGTTGATTACCGCGGCA+CGG 0.603398 2_3:+10147215 None:intergenic
AGAAACATTGCTACTTGTCG+TGG 0.603866 2_3:+10142594 None:intergenic
AGAGAGACCAATAAAAGAAG+GGG 0.604083 2_3:-10147791 None:intergenic
CTATCCACAACGACCTGATG+AGG 0.604241 2_3:-10147311 Msa0277560:CDS
TCAACCTCATCAGGTCGTTG+TGG 0.604355 2_3:+10147307 None:intergenic
ACAAATTCCAGCTCCATCGC+CGG 0.606383 2_3:-10146429 Msa0277560:CDS
TCTGCTTGAAGGACCGACTG+AGG 0.609373 2_3:+10145986 None:intergenic
TGTTGTGAAGAAGGTCCAGA+TGG 0.611457 2_3:+10146344 None:intergenic
AGAAGACGGATCAGGTTGAG+TGG 0.611535 2_3:+10147482 None:intergenic
AAATTGGGGTACTGGTCGCA+AGG 0.614330 2_3:-10146322 Msa0277560:CDS
TGCAACTGGTACATCTGTCA+GGG 0.614727 2_3:+10142837 None:intergenic
CTAGATCTGAATGTGGAACT+GGG 0.614781 2_3:+10142440 None:intergenic
AATGTGGAACTGGGATAACT+GGG 0.616887 2_3:+10142449 None:intergenic
TATGGTATTGTCCCCAACCA+TGG 0.619686 2_3:-10146255 Msa0277560:CDS
GCAAGGCCACCTCTACTACA+TGG 0.623985 2_3:-10146305 Msa0277560:CDS
GGTTTGTGATACCTATAAGA+TGG 0.626246 2_3:+10145879 None:intergenic
GACGTAACGGAAGCCCTGCA+GGG 0.628849 2_3:+10145817 None:intergenic
GTGGAAGAGGCGTAAACACA+TGG 0.630245 2_3:+10142166 None:intergenic
ATGGTTGGGGACAATACCAT+AGG 0.634397 2_3:+10146257 None:intergenic
TCATCCTCGTGACCGTGCCG+CGG 0.635356 2_3:-10147227 Msa0277560:intron
TGAAGGAACAAGAGTACCAA+CGG 0.641917 2_3:+10142795 None:intergenic
GAGGTTCCGATGAAATGGAA+AGG 0.642762 2_3:+10147551 None:intergenic
AACGAACCATGTAGTAGAGG+TGG 0.645568 2_3:+10146299 None:intergenic
TCCGATGAAATGGAAAGGAA+GGG 0.649914 2_3:+10147556 None:intergenic
AAGTGTGTCTATGTCCGCGT+GGG 0.652362 2_3:-10147689 Msa0277560:five_prime_UTR
CCAAATATCATTATTCAAGG+AGG 0.652623 2_3:-10142502 Msa0277560:three_prime_UTR
ACATTAGCTGGAGAACCAGA+AGG 0.656658 2_3:+10146089 None:intergenic
ATAGAAAGAACCTGGCACAC+AGG 0.659872 2_3:+10147060 None:intergenic
ATAACCCAGCTACCTTCACC+GGG 0.661218 2_3:-10146044 Msa0277560:CDS
ATTACCGCGGCACGGTCACG+AGG 0.663314 2_3:+10147223 None:intergenic
GGTCCAGTATAGGCATTACC+CGG 0.665325 2_3:+10146026 None:intergenic
GGATCAGGTTGAGTGGAGCG+AGG 0.669957 2_3:+10147489 None:intergenic
ACAAACGAACCATGTAGTAG+AGG 0.670307 2_3:+10146296 None:intergenic
ACGGTTGGATACAATGGGGA+AGG 0.671841 2_3:+10146374 None:intergenic
GAGAACCAGAAGGAAGTACA+GGG 0.676606 2_3:+10146099 None:intergenic
TACATGTAAAGGTGAAACCG+AGG 0.677620 2_3:+10146403 None:intergenic
GAGTGCTTGATTGAGAAACA+GGG 0.682043 2_3:+10142647 None:intergenic
ACATGTAAAGGTGAAACCGA+GGG 0.683887 2_3:+10146404 None:intergenic
GATGAAATGGAAAGGAAGGG+TGG 0.685039 2_3:+10147559 None:intergenic
GGGGAGTATCCTGAACGTGT+TGG 0.686141 2_3:-10147087 Msa0277560:CDS
GTGGATGGACATGTGCACAA+TGG 0.696923 2_3:+10142272 None:intergenic
ACTTACTGCAGGATCCAACA+GGG 0.697938 2_3:-10142746 Msa0277560:CDS
AAAGTGTGTCTATGTCCGCG+TGG 0.698000 2_3:-10147690 Msa0277560:five_prime_UTR
GGTTATCCCATAAAGCTGTG+TGG 0.703062 2_3:+10146061 None:intergenic
TGCACTCATTACGCACAGCG+TGG 0.705043 2_3:-10142934 Msa0277560:CDS
AAGTGTGCTAGATCTGAATG+TGG 0.713914 2_3:+10142433 None:intergenic
TCATTATTACTCCAAACCAG+AGG 0.716269 2_3:-10145916 Msa0277560:CDS
GGAGTTATTCTAAAGCAAGG+CGG 0.717033 2_3:+10142311 None:intergenic
GCAGATGGACTGTAACTCAG+TGG 0.717626 2_3:+10142865 None:intergenic
ACAATACCATAGGTCCATAG+GGG 0.724835 2_3:+10146267 None:intergenic
ATAATCAGGAGACTGCAATG+AGG 0.735467 2_3:-10142038 Msa0277560:three_prime_UTR
CTGTACGGTTGGATACAATG+GGG 0.782914 2_3:+10146370 None:intergenic
TGAGTCTAGTCTAACCCACG+CGG 0.826945 2_3:+10147675 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATATATATACATAC+CGG + chr2_3:10143026-10143045 None:intergenic 10.0%
!!! TGTTTTTTTTTTTTTGAATA+TGG - chr2_3:10143085-10143104 Msa0277560:intron 10.0%
!! TGATAATTATTAAATTTAAC+AGG - chr2_3:10143134-10143153 Msa0277560:intron 10.0%
!! GATAATTATTAAATTTAACA+GGG - chr2_3:10143135-10143154 Msa0277560:intron 10.0%
!! TAATCATCATAAAATAAAAA+AGG - chr2_3:10144815-10144834 Msa0277560:intron 10.0%
!!! TAATAAGATAATAATTTTTC+GGG - chr2_3:10145008-10145027 Msa0277560:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG + chr2_3:10145056-10145075 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG + chr2_3:10145057-10145076 None:intergenic 10.0%
!!! TTCCTTGTTTTTTTTTTTTT+TGG - chr2_3:10142639-10142658 Msa0277560:CDS 15.0%
!! TACCAAAAAAAAAAAAAACA+AGG + chr2_3:10142644-10142663 None:intergenic 15.0%
!! TATGAGTAGTTTAATTAAAT+TGG + chr2_3:10144082-10144101 None:intergenic 15.0%
!!! TTATTTTTTGTGTTCATTTT+GGG - chr2_3:10144193-10144212 Msa0277560:intron 15.0%
!!! AAACTCTTTAATTTAATACT+CGG - chr2_3:10144904-10144923 Msa0277560:intron 15.0%
!!! TCTAAAATAATAAATTTGTC+CGG - chr2_3:10144942-10144961 Msa0277560:intron 15.0%
!! TCTAAATTAATAAATTTCTC+CGG - chr2_3:10145342-10145361 Msa0277560:intron 15.0%
!!! AATTTTGTTATAGTATTCTT+CGG - chr2_3:10145744-10145763 Msa0277560:intron 15.0%
!! ATCAATAAATTATCTTTAGT+GGG + chr2_3:10145796-10145815 None:intergenic 15.0%
!! ACTAAAGATAATTTATTGAT+CGG - chr2_3:10145796-10145815 Msa0277560:intron 15.0%
!! ATATGAAAAAGTAAAGAATA+TGG + chr2_3:10146065-10146084 None:intergenic 15.0%
!! ATAAATATTAAATACAGGTT+GGG + chr2_3:10147598-10147617 None:intergenic 15.0%
!! TATAAATATTAAATACAGGT+TGG + chr2_3:10147599-10147618 None:intergenic 15.0%
!! AACCTGTATTTAATATTTAT+AGG - chr2_3:10147598-10147617 Msa0277560:intron 15.0%
!! ACCTGTATTTAATATTTATA+GGG - chr2_3:10147599-10147618 Msa0277560:intron 15.0%
!!! TTGATTGTGTTTTCTTAATT+TGG - chr2_3:10142511-10142530 Msa0277560:three_prime_UTR 20.0%
!! CATAATAATTTAGTGAAACA+GGG + chr2_3:10142989-10143008 None:intergenic 20.0%
!!! TTTTGAATATGGAAATGTTT+TGG - chr2_3:10143096-10143115 Msa0277560:intron 20.0%
!!! ATGTTCATATTTTGTGAAAA+CGG - chr2_3:10143167-10143186 Msa0277560:intron 20.0%
!! AACAATATAAAAGAAATGCT+TGG + chr2_3:10143484-10143503 None:intergenic 20.0%
!!! TAATAAAATTTCTAGGATAG+TGG - chr2_3:10144146-10144165 Msa0277560:intron 20.0%
!!! AATAAAATTTCTAGGATAGT+GGG - chr2_3:10144147-10144166 Msa0277560:intron 20.0%
!!! GTTATTTTTTGTGTTCATTT+TGG - chr2_3:10144192-10144211 Msa0277560:intron 20.0%
!!! ATTCAACTAAATTTTAGAGA+TGG + chr2_3:10144235-10144254 None:intergenic 20.0%
!! TTATGCATAATTTCATCAAA+TGG + chr2_3:10144260-10144279 None:intergenic 20.0%
!!! AGTATTTTAATCATAGAGTT+GGG - chr2_3:10144294-10144313 Msa0277560:intron 20.0%
!!! ATTAATGTATTGATCATGAA+GGG - chr2_3:10144595-10144614 Msa0277560:intron 20.0%
!! AAAAAAACTTCCATGTATAT+GGG + chr2_3:10144743-10144762 None:intergenic 20.0%
!!! ATATACATGGAAGTTTTTTT+GGG - chr2_3:10144743-10144762 Msa0277560:intron 20.0%
!! CAAAACAGAAAATATTTCAA+GGG + chr2_3:10144792-10144811 None:intergenic 20.0%
!! ACAAAACAGAAAATATTTCA+AGG + chr2_3:10144793-10144812 None:intergenic 20.0%
!!! TACAAGAGAGATTTTTAATA+TGG - chr2_3:10144839-10144858 Msa0277560:intron 20.0%
!!! AGTTTTTCAATTTTTTACAC+TGG + chr2_3:10144980-10144999 None:intergenic 20.0%
!! CTCTATAAATTAATAATGTC+AGG + chr2_3:10145369-10145388 None:intergenic 20.0%
!!! TTTTAACTGTACTCTTTTTA+GGG - chr2_3:10145389-10145408 Msa0277560:intron 20.0%
!!! TTACAATGTTGATTAAACTA+GGG + chr2_3:10145628-10145647 None:intergenic 20.0%
!!! AAACTTTTTAGACTATTCTT+TGG - chr2_3:10145769-10145788 Msa0277560:intron 20.0%
!! TCAATAAATTATCTTTAGTG+GGG + chr2_3:10145795-10145814 None:intergenic 20.0%
!! GATCAATAAATTATCTTTAG+TGG + chr2_3:10145797-10145816 None:intergenic 20.0%
!!! AATTTCCATTTATGCTTTTT+TGG - chr2_3:10145997-10146016 Msa0277560:CDS 20.0%
!!! ATGCAATAAGTATGTTATTT+TGG - chr2_3:10146208-10146227 Msa0277560:intron 20.0%
!!! ATTCACATTTCTTAATTTGA+GGG + chr2_3:10147109-10147128 None:intergenic 20.0%
!! GAAGAATTGAGATAAAAAAA+AGG + chr2_3:10147150-10147169 None:intergenic 20.0%
!! ACCCTATAAATATTAAATAC+AGG + chr2_3:10147603-10147622 None:intergenic 20.0%
!!! GTTATATGGTTTGTAATTTT+TGG - chr2_3:10147673-10147692 Msa0277560:five_prime_UTR 20.0%
!!! ATCTGAATGTGTTTTGTTTT+AGG - chr2_3:10142538-10142557 Msa0277560:three_prime_UTR 25.0%
!!! TGTGTTTTGTTTTAGGTTAT+TGG - chr2_3:10142545-10142564 Msa0277560:three_prime_UTR 25.0%
! ACTAAATATTGCGTTCAATT+CGG - chr2_3:10142666-10142685 Msa0277560:CDS 25.0%
!!! AAGCAAATATTCATTTTTCC+AGG - chr2_3:10142699-10142718 Msa0277560:CDS 25.0%
! TTGAAATGCAGTATTATATG+AGG - chr2_3:10142892-10142911 Msa0277560:CDS 25.0%
! CCATAATAATTTAGTGAAAC+AGG + chr2_3:10142990-10143009 None:intergenic 25.0%
! CCTGTTTCACTAAATTATTA+TGG - chr2_3:10142987-10143006 Msa0277560:intron 25.0%
! TTAAATTTAACAGGGTGAAA+AGG - chr2_3:10143143-10143162 Msa0277560:intron 25.0%
!! TGTTCATATTTTGTGAAAAC+GGG - chr2_3:10143168-10143187 Msa0277560:intron 25.0%
! ATATTTCACAACTGAATAAG+AGG + chr2_3:10143921-10143940 None:intergenic 25.0%
!! AAAAAACTTCTTTTTCTACC+AGG + chr2_3:10143972-10143991 None:intergenic 25.0%
!! CAACAAATTACAGTAGTTTT+TGG - chr2_3:10144027-10144046 Msa0277560:intron 25.0%
!! TTGGTGATTAAAATAGCTAT+TGG - chr2_3:10144046-10144065 Msa0277560:intron 25.0%
! TTAAACTACTCATACATAGT+TGG - chr2_3:10144088-10144107 Msa0277560:intron 25.0%
!!! GAGTATTTTAATCATAGAGT+TGG - chr2_3:10144293-10144312 Msa0277560:intron 25.0%
! TAGCATTGTCTAAAAACTTA+AGG + chr2_3:10144479-10144498 None:intergenic 25.0%
!! CATTAATGTATTGATCATGA+AGG - chr2_3:10144594-10144613 Msa0277560:intron 25.0%
! CAGATCTAATTATAATATGC+AGG + chr2_3:10144662-10144681 None:intergenic 25.0%
! GAAATACAAAAACTCACTAT+TGG + chr2_3:10144688-10144707 None:intergenic 25.0%
! CAAAAAAACTTCCATGTATA+TGG + chr2_3:10144744-10144763 None:intergenic 25.0%
!!! CATATACATGGAAGTTTTTT+TGG - chr2_3:10144742-10144761 Msa0277560:intron 25.0%
! TAAATTAATAATGTCAGGAC+CGG + chr2_3:10145364-10145383 None:intergenic 25.0%
!!! GTTTTAACTGTACTCTTTTT+AGG - chr2_3:10145388-10145407 Msa0277560:intron 25.0%
!! TTTAACTGTACTCTTTTTAG+GGG - chr2_3:10145390-10145409 Msa0277560:intron 25.0%
!! CTTACAATGTTGATTAAACT+AGG + chr2_3:10145629-10145648 None:intergenic 25.0%
!!! TGTAAAAGCATAGGTATTTT+AGG - chr2_3:10145686-10145705 Msa0277560:intron 25.0%
! AGCATAAATGGAAATTATGT+TGG + chr2_3:10145993-10146012 None:intergenic 25.0%
!! ATAGACCAAAAAAGCATAAA+TGG + chr2_3:10146005-10146024 None:intergenic 25.0%
!! TCTATCACATAATGTCATTT+AGG - chr2_3:10146168-10146187 Msa0277560:intron 25.0%
!! CAAACCTAATCTAAAATTAC+AGG + chr2_3:10146397-10146416 None:intergenic 25.0%
!!! TCTTTTTAAAAGACACACTT+AGG - chr2_3:10146616-10146635 Msa0277560:intron 25.0%
! AAAGCAGTAGAATAATAGTT+TGG + chr2_3:10146673-10146692 None:intergenic 25.0%
!! TTCACATTTCTTAATTTGAG+GGG + chr2_3:10147108-10147127 None:intergenic 25.0%
!! CATTCACATTTCTTAATTTG+AGG + chr2_3:10147110-10147129 None:intergenic 25.0%
! CAACCAAATATCATTATTCA+AGG - chr2_3:10147169-10147188 Msa0277560:intron 25.0%
! TTTATTCAAGATCAAAGGAA+TGG + chr2_3:10147306-10147325 None:intergenic 25.0%
!!! CATGTTTTATTCAAGATCAA+AGG + chr2_3:10147311-10147330 None:intergenic 25.0%
! CTTTGATCTTGAATAAAACA+TGG - chr2_3:10147309-10147328 Msa0277560:CDS 25.0%
! ATTGCTACCTAATTCAAAAA+GGG + chr2_3:10147539-10147558 None:intergenic 25.0%
! AATTGCTACCTAATTCAAAA+AGG + chr2_3:10147540-10147559 None:intergenic 25.0%
! TTTACTGTTGAGAAATAATC+AGG - chr2_3:10147622-10147641 Msa0277560:five_prime_UTR 25.0%
! CTTCACATTGTTATGTTATA+TGG - chr2_3:10147659-10147678 Msa0277560:five_prime_UTR 25.0%
!! AATCTATCTTCTAGAATGAG+AGG + chr2_3:10142145-10142164 None:intergenic 30.0%
GAAGATAGATTACTCTTCAA+TGG - chr2_3:10142154-10142173 Msa0277560:three_prime_UTR 30.0%
TGTTTGTTTACCTTCTAAAC+CGG + chr2_3:10142243-10142262 None:intergenic 30.0%
!!! TATTTGAGAACTGGTTTTTG+TGG - chr2_3:10142400-10142419 Msa0277560:three_prime_UTR 30.0%
AAGGAAAAATAGAAAGAACC+TGG + chr2_3:10142625-10142644 None:intergenic 30.0%
!!! CAAACACATACTACTTTTTC+AGG + chr2_3:10142794-10142813 None:intergenic 30.0%
CTGAAAAAGTAGTATGTGTT+TGG - chr2_3:10142792-10142811 Msa0277560:CDS 30.0%
! TCTTCATAGTATGTGCATTT+TGG - chr2_3:10142842-10142861 Msa0277560:CDS 30.0%
!!! AATATGGAAATGTTTTGGTC+TGG - chr2_3:10143101-10143120 Msa0277560:intron 30.0%
AAATTGATAAGGTCCAGTAT+AGG + chr2_3:10143661-10143680 None:intergenic 30.0%
TAATGATACTCTGGTTGATT+AGG + chr2_3:10143744-10143763 None:intergenic 30.0%
TTGGAGTAATAATGATACTC+TGG + chr2_3:10143753-10143772 None:intergenic 30.0%
AGTTGTGAAATATATCTCCA+CGG - chr2_3:10143928-10143947 Msa0277560:intron 30.0%
!! ACTACTGTAATTTGTTGAAG+AGG + chr2_3:10144024-10144043 None:intergenic 30.0%
AATTATGCATAAATGCCCAT+TGG - chr2_3:10144268-10144287 Msa0277560:intron 30.0%
GATTAAAATACTCGTCCAAT+GGG + chr2_3:10144286-10144305 None:intergenic 30.0%
TGATTAAAATACTCGTCCAA+TGG + chr2_3:10144287-10144306 None:intergenic 30.0%
ATACACTATGATTGTACTCT+GGG - chr2_3:10144350-10144369 Msa0277560:intron 30.0%
TTTCGTCTGCATAATTACTA+GGG - chr2_3:10144565-10144584 Msa0277560:intron 30.0%
ATACTTCTTTCCCATATACA+TGG - chr2_3:10144730-10144749 Msa0277560:intron 30.0%
! GGAGATCCCTTTATAATTTT+CGG - chr2_3:10145029-10145048 Msa0277560:intron 30.0%
TTGGGACCGAAAATTATAAA+GGG + chr2_3:10145038-10145057 None:intergenic 30.0%
ACTGTACATACCAAACAAAA+GGG + chr2_3:10145262-10145281 None:intergenic 30.0%
TACTGTACATACCAAACAAA+AGG + chr2_3:10145263-10145282 None:intergenic 30.0%
!! AGAGTGATTAGGTTTTATGA+TGG - chr2_3:10145561-10145580 Msa0277560:intron 30.0%
TTCTTCCAATTTCATCTGTA+TGG + chr2_3:10145587-10145606 None:intergenic 30.0%
AGATCCAATTCTTAAGAACT+TGG - chr2_3:10145885-10145904 Msa0277560:CDS 30.0%
TCAACCAAGTTCTTAAGAAT+TGG + chr2_3:10145892-10145911 None:intergenic 30.0%
ATAAGAGTTTAGATCAAGTG+CGG + chr2_3:10145963-10145982 None:intergenic 30.0%
AAGTAAAGAGAATGCAAAAC+TGG + chr2_3:10146125-10146144 None:intergenic 30.0%
!!! GTATGTTATTTTGGTTTGTG+CGG - chr2_3:10146217-10146236 Msa0277560:intron 30.0%
! CCTAATCTAAAATTACAGGA+AGG + chr2_3:10146393-10146412 None:intergenic 30.0%
! CCTTCCTGTAATTTTAGATT+AGG - chr2_3:10146390-10146409 Msa0277560:CDS 30.0%
TTCCATATTATAGACCAGAT+TGG - chr2_3:10146426-10146445 Msa0277560:CDS 30.0%
TTCATCCATTAGTGTTTAGT+TGG - chr2_3:10146542-10146561 Msa0277560:intron 30.0%
AAAGTCCAACTAAACACTAA+TGG + chr2_3:10146550-10146569 None:intergenic 30.0%
ATTAGTGTTTAGTTGGACTT+TGG - chr2_3:10146549-10146568 Msa0277560:intron 30.0%
!! TCCAATGTTTTTGTTTGATC+AGG - chr2_3:10146706-10146725 Msa0277560:CDS 30.0%
!! CCAATGTTTTTGTTTGATCA+GGG - chr2_3:10146707-10146726 Msa0277560:CDS 30.0%
CCTCCTTGAATAATGATATT+TGG + chr2_3:10147175-10147194 None:intergenic 30.0%
CCAAATATCATTATTCAAGG+AGG - chr2_3:10147172-10147191 Msa0277560:intron 30.0%
!! TTAGGAGTTATTCTAAAGCA+AGG + chr2_3:10147369-10147388 None:intergenic 30.0%
AATGGAATTGCAGATTCTTT+AGG + chr2_3:10147387-10147406 None:intergenic 30.0%
GTTCTCATATGAAAGAAGAT+TGG + chr2_3:10147466-10147485 None:intergenic 30.0%
! GCAATTTTCCATTTCTGTTT+TGG - chr2_3:10147554-10147573 Msa0277560:five_prime_UTR 30.0%
TGTAAAATGCAGAACCTATG+TGG - chr2_3:10142314-10142333 Msa0277560:three_prime_UTR 35.0%
TGCACTTACTATTTGAGAAC+TGG - chr2_3:10142391-10142410 Msa0277560:three_prime_UTR 35.0%
! AATGAAAGAGTTGATTACCG+CGG + chr2_3:10142467-10142486 None:intergenic 35.0%
CATGAGTTATTCAATGAACC+TGG + chr2_3:10142720-10142739 None:intergenic 35.0%
AGGACAAGATCTTGCAAATT+TGG - chr2_3:10142912-10142931 Msa0277560:CDS 35.0%
TATATACATACCGGACGTAA+CGG + chr2_3:10143017-10143036 None:intergenic 35.0%
GACCTTCTTCACAACAAATT+GGG - chr2_3:10143337-10143356 Msa0277560:intron 35.0%
ACCTTCTTCACAACAAATTG+GGG - chr2_3:10143338-10143357 Msa0277560:intron 35.0%
! ACTGGACCTTATCAATTTTC+TGG - chr2_3:10143663-10143682 Msa0277560:intron 35.0%
GAGGAACCAGAAAATTGATA+AGG + chr2_3:10143672-10143691 None:intergenic 35.0%
TCATTATTACTCCAAACCAG+AGG - chr2_3:10143758-10143777 Msa0277560:intron 35.0%
! TTCCTTTTGCTCCATCTTAT+AGG - chr2_3:10143784-10143803 Msa0277560:intron 35.0%
TACCTATAAGATGGAGCAAA+AGG + chr2_3:10143789-10143808 None:intergenic 35.0%
GGTTTGTGATACCTATAAGA+TGG + chr2_3:10143798-10143817 None:intergenic 35.0%
AGTTGAGAGGAAATCATTAC+CGG + chr2_3:10143882-10143901 None:intergenic 35.0%
! TTTTTCTACCAGGTGAAAGA+GGG + chr2_3:10143962-10143981 None:intergenic 35.0%
GATTAAAATAGCTATTGGCG+AGG - chr2_3:10144051-10144070 Msa0277560:intron 35.0%
GATACACTATGATTGTACTC+TGG - chr2_3:10144349-10144368 Msa0277560:intron 35.0%
TACACTATGATTGTACTCTG+GGG - chr2_3:10144351-10144370 Msa0277560:intron 35.0%
CACACTGAAAGATGTTGAAT+AGG + chr2_3:10144395-10144414 None:intergenic 35.0%
CTATTCAACATCTTTCAGTG+TGG - chr2_3:10144393-10144412 Msa0277560:intron 35.0%
AACACAAAGAATCATGATCG+AGG - chr2_3:10144498-10144517 Msa0277560:intron 35.0%
ACACAAAGAATCATGATCGA+GGG - chr2_3:10144499-10144518 Msa0277560:intron 35.0%
GTTTCGTCTGCATAATTACT+AGG - chr2_3:10144564-10144583 Msa0277560:intron 35.0%
! TCACCTTAAGGAGTACATAT+GGG + chr2_3:10144629-10144648 None:intergenic 35.0%
! ATCACCTTAAGGAGTACATA+TGG + chr2_3:10144630-10144649 None:intergenic 35.0%
GAAGTATATGCATGCTGAAA+AGG + chr2_3:10144717-10144736 None:intergenic 35.0%
CTTGGGACCGAAAATTATAA+AGG + chr2_3:10145039-10145058 None:intergenic 35.0%
ACTACTGTGTTCATATGCAT+TGG + chr2_3:10145175-10145194 None:intergenic 35.0%
CTAATTTACGTTGAGTCTCA+AGG - chr2_3:10145197-10145216 Msa0277560:intron 35.0%
!! GACTAATTTGCCCTTTTGTT+TGG - chr2_3:10145249-10145268 Msa0277560:intron 35.0%
!! TACTCTTTTTAGGGGTATGA+TGG - chr2_3:10145398-10145417 Msa0277560:intron 35.0%
GCAAAACTAACTCTTGGTAT+AGG + chr2_3:10145460-10145479 None:intergenic 35.0%
ATCTATGAGTACCAACTGAA+AGG + chr2_3:10145510-10145529 None:intergenic 35.0%
CAACATTGTAAGAAGTCTTG+AGG - chr2_3:10145637-10145656 Msa0277560:intron 35.0%
ATTGTAAGAAGTCTTGAGGA+CGG - chr2_3:10145641-10145660 Msa0277560:intron 35.0%
TAGATCAAGTGCGGAAAATA+GGG + chr2_3:10145954-10145973 None:intergenic 35.0%
TTAGATCAAGTGCGGAAAAT+AGG + chr2_3:10145955-10145974 None:intergenic 35.0%
! CTCTCTTAAACTCGTGATTT+TGG - chr2_3:10146026-10146045 Msa0277560:CDS 35.0%
AGAATGCAAAACTGGAAAAG+CGG + chr2_3:10146117-10146136 None:intergenic 35.0%
CATAGGATTCAGCGATAAAA+CGG + chr2_3:10146335-10146354 None:intergenic 35.0%
!!! CTAGTTATGGCCAAGTTTTT+TGG - chr2_3:10146363-10146382 Msa0277560:CDS 35.0%
CTCCAATCTGGTCTATAATA+TGG + chr2_3:10146431-10146450 None:intergenic 35.0%
! CTTCCTGATTCTTTTGAATG+TGG - chr2_3:10146453-10146472 Msa0277560:CDS 35.0%
! TTTAGTTGGACTTTGGTTCA+AGG - chr2_3:10146556-10146575 Msa0277560:intron 35.0%
CCCTGATCAAACAAAAACAT+TGG + chr2_3:10146710-10146729 None:intergenic 35.0%
! ACTGATGACGATATTCTAGA+AGG + chr2_3:10146962-10146981 None:intergenic 35.0%
!!! GTCGTCAAATAGGGTTTTTT+TGG - chr2_3:10147194-10147213 Msa0277560:intron 35.0%
TAATTCAAAAAGGGTTCAGG+TGG + chr2_3:10147530-10147549 None:intergenic 35.0%
! ACCTGAACCCTTTTTGAATT+AGG - chr2_3:10147529-10147548 Msa0277560:five_prime_UTR 35.0%
ACCTAATTCAAAAAGGGTTC+AGG + chr2_3:10147533-10147552 None:intergenic 35.0%
TAGGACTTCCAAAACAGAAA+TGG + chr2_3:10147565-10147584 None:intergenic 35.0%
TGACAATCAAAAGCTTGACT+TGG - chr2_3:10147712-10147731 Msa0277560:five_prime_UTR 35.0%
!! AGAGAAAGTGAGGTGTTGTT+GGG + chr2_3:10142059-10142078 None:intergenic 40.0%
ACCCTTCCTTTCCATTTCAT+CGG - chr2_3:10142117-10142136 Msa0277560:three_prime_UTR 40.0%
TCCGATGAAATGGAAAGGAA+GGG + chr2_3:10142121-10142140 None:intergenic 40.0%
TTCCGATGAAATGGAAAGGA+AGG + chr2_3:10142122-10142141 None:intergenic 40.0%
AATGAGAGGTTCCGATGAAA+TGG + chr2_3:10142131-10142150 None:intergenic 40.0%
!! TCTAAACCGGTTTGAGAATC+CGG + chr2_3:10142230-10142249 None:intergenic 40.0%
! GATTCTCAAACCGGTTTAGA+AGG - chr2_3:10142230-10142249 Msa0277560:three_prime_UTR 40.0%
TAAGTGCAATCAACCTCATC+AGG + chr2_3:10142379-10142398 None:intergenic 40.0%
!!! AGAACTGGTTTTTGTGGCTT+TGG - chr2_3:10142406-10142425 Msa0277560:three_prime_UTR 40.0%
!!! GTTTTTGTGGCTTTGGTTCT+AGG - chr2_3:10142413-10142432 Msa0277560:three_prime_UTR 40.0%
TATCATCATCCGAAACAGAC+AGG - chr2_3:10142948-10142967 Msa0277560:CDS 40.0%
TTATGGATATCCGTTACGTC+CGG - chr2_3:10143004-10143023 Msa0277560:intron 40.0%
AAAACGGGACAATGCAAGTT+TGG - chr2_3:10143183-10143202 Msa0277560:intron 40.0%
ATTTGTACACTAGCAGGAAC+TGG + chr2_3:10143231-10143250 None:intergenic 40.0%
ACATGTAAAGGTGAAACCGA+GGG + chr2_3:10143273-10143292 None:intergenic 40.0%
TACATGTAAAGGTGAAACCG+AGG + chr2_3:10143274-10143293 None:intergenic 40.0%
!! GAAGGTACTGGTACATGTAA+AGG + chr2_3:10143285-10143304 None:intergenic 40.0%
TCTGTACGGTTGGATACAAT+GGG + chr2_3:10143308-10143327 None:intergenic 40.0%
GGACCTTCTTCACAACAAAT+TGG - chr2_3:10143336-10143355 Msa0277560:intron 40.0%
!! ACCCCAATTTGTTGTGAAGA+AGG + chr2_3:10143342-10143361 None:intergenic 40.0%
TTCACAACAAATTGGGGTAC+TGG - chr2_3:10143344-10143363 Msa0277560:intron 40.0%
ACAAACGAACCATGTAGTAG+AGG + chr2_3:10143381-10143400 None:intergenic 40.0%
ACAATACCATAGGTCCATAG+GGG + chr2_3:10143410-10143429 None:intergenic 40.0%
GACAATACCATAGGTCCATA+GGG + chr2_3:10143411-10143430 None:intergenic 40.0%
AGAAAAAGGAACCATGGTTG+GGG + chr2_3:10143433-10143452 None:intergenic 40.0%
CAGAAAAAGGAACCATGGTT+GGG + chr2_3:10143434-10143453 None:intergenic 40.0%
CTGTTAATCGTTGAGCTCTT+TGG - chr2_3:10143533-10143552 Msa0277560:intron 40.0%
!!! CAATTTTCTGGTTCCTCAGT+CGG - chr2_3:10143675-10143694 Msa0277560:intron 40.0%
TCGTTCTGATTTCTGCTTGA+AGG + chr2_3:10143702-10143721 None:intergenic 40.0%
GAAATCATTACCGGACGTAA+CGG + chr2_3:10143873-10143892 None:intergenic 40.0%
CAGAGTACAAAGAAGTTGAG+AGG + chr2_3:10143895-10143914 None:intergenic 40.0%
CTCTCAACTTCTTTGTACTC+TGG - chr2_3:10143893-10143912 Msa0277560:intron 40.0%
! CTTTTTCTACCAGGTGAAAG+AGG + chr2_3:10143963-10143982 None:intergenic 40.0%
TTCCCCATATGTACTCCTTA+AGG - chr2_3:10144623-10144642 Msa0277560:intron 40.0%
! CACCTTAAGGAGTACATATG+GGG + chr2_3:10144628-10144647 None:intergenic 40.0%
GGACACAAGAAATCACCTTA+AGG + chr2_3:10144641-10144660 None:intergenic 40.0%
!!! TTTTTTACACTGGCCCAAGT+CGG + chr2_3:10144970-10144989 None:intergenic 40.0%
ATGATGGTCCTTAAAACGCT+TGG - chr2_3:10145414-10145433 Msa0277560:intron 40.0%
TGATGGTCCTTAAAACGCTT+GGG - chr2_3:10145415-10145434 Msa0277560:intron 40.0%
TCGCATGCAAAACTAACTCT+TGG + chr2_3:10145466-10145485 None:intergenic 40.0%
!! TAGTTTTGCATGCGACTTAG+TGG - chr2_3:10145471-10145490 Msa0277560:intron 40.0%
ATGCGACTTAGTGGTTGTTT+GGG - chr2_3:10145480-10145499 Msa0277560:intron 40.0%
ATAGATGTTCATGCCCCATA+AGG - chr2_3:10145524-10145543 Msa0277560:intron 40.0%
GATGGCCATACAGATGAAAT+TGG - chr2_3:10145579-10145598 Msa0277560:intron 40.0%
TTGTAAGAAGTCTTGAGGAC+GGG - chr2_3:10145642-10145661 Msa0277560:intron 40.0%
! GGCAGTACTTGTAAAAGCAT+AGG - chr2_3:10145677-10145696 Msa0277560:intron 40.0%
!! CTTTGCTGTTGTCTAAGAGT+TGG - chr2_3:10145856-10145875 Msa0277560:CDS 40.0%
CATAACTAGCATGGGAACAT+AGG + chr2_3:10146352-10146371 None:intergenic 40.0%
CTATGTTCCCATGCTAGTTA+TGG - chr2_3:10146350-10146369 Msa0277560:CDS 40.0%
AACTTGGCCATAACTAGCAT+GGG + chr2_3:10146360-10146379 None:intergenic 40.0%
AAACTTGGCCATAACTAGCA+TGG + chr2_3:10146361-10146380 None:intergenic 40.0%
GGAAGGACATCCAAAAAACT+TGG + chr2_3:10146376-10146395 None:intergenic 40.0%
CCACCACATTCAAAAGAATC+AGG + chr2_3:10146459-10146478 None:intergenic 40.0%
! CCTGATTCTTTTGAATGTGG+TGG - chr2_3:10146456-10146475 Msa0277560:CDS 40.0%
GGATGATCAAATTTGCATGC+AGG + chr2_3:10146782-10146801 None:intergenic 40.0%
AACTCTGGTGAAGAAGATGA+AGG + chr2_3:10146899-10146918 None:intergenic 40.0%
TCATCAGTAAGCACATCAAC+TGG - chr2_3:10146974-10146993 Msa0277560:intron 40.0%
GAGTGCTTGATTGAGAAACA+GGG + chr2_3:10147030-10147049 None:intergenic 40.0%
! ATTGCTACTTGTCGTGGTAT+TGG + chr2_3:10147077-10147096 None:intergenic 40.0%
! AGAAACATTGCTACTTGTCG+TGG + chr2_3:10147083-10147102 None:intergenic 40.0%
ATTCAAGGAGGTCGTCAAAT+AGG - chr2_3:10147184-10147203 Msa0277560:intron 40.0%
TTCAAGGAGGTCGTCAAATA+GGG - chr2_3:10147185-10147204 Msa0277560:intron 40.0%
AATGTGGAACTGGGATAACT+GGG + chr2_3:10147228-10147247 None:intergenic 40.0%
CTAGATCTGAATGTGGAACT+GGG + chr2_3:10147237-10147256 None:intergenic 40.0%
AAGTGTGCTAGATCTGAATG+TGG + chr2_3:10147244-10147263 None:intergenic 40.0%
! ATGGGTTGCTAAAGTTCTCA+TGG + chr2_3:10147339-10147358 None:intergenic 40.0%
!! GGAGTTATTCTAAAGCAAGG+CGG + chr2_3:10147366-10147385 None:intergenic 40.0%
CCAAATATTGGAGATGTGGA+TGG + chr2_3:10147420-10147439 None:intergenic 40.0%
CCATCCACATCTCCAATATT+TGG - chr2_3:10147417-10147436 Msa0277560:intron 40.0%
GACTCCAAATATTGGAGATG+TGG + chr2_3:10147424-10147443 None:intergenic 40.0%
GCACAACAGACTCCAAATAT+TGG + chr2_3:10147432-10147451 None:intergenic 40.0%
ACACATGGTCAATGAAAGTC+TGG + chr2_3:10147496-10147515 None:intergenic 40.0%
!! CAGGTTGGGAAGTATTGAAT+AGG + chr2_3:10147584-10147603 None:intergenic 40.0%
ATAATCAGGAGACTGCAATG+AGG - chr2_3:10147636-10147655 Msa0277560:five_prime_UTR 40.0%
!! GAGAGAAAGTGAGGTGTTGT+TGG + chr2_3:10142060-10142079 None:intergenic 45.0%
AGAGAGAGAGAGAGAAAGTG+AGG + chr2_3:10142069-10142088 None:intergenic 45.0%
AAATGGAAAGGAAGGGTGGT+TGG + chr2_3:10142114-10142133 None:intergenic 45.0%
GATGAAATGGAAAGGAAGGG+TGG + chr2_3:10142118-10142137 None:intergenic 45.0%
GAGGTTCCGATGAAATGGAA+AGG + chr2_3:10142126-10142145 None:intergenic 45.0%
AACCTGATCCGTCTTCTCAA+TGG - chr2_3:10142198-10142217 Msa0277560:three_prime_UTR 45.0%
TGCAGAACCTATGTGGCAAT+TGG - chr2_3:10142321-10142340 Msa0277560:three_prime_UTR 45.0%
GCAGAACCTATGTGGCAATT+GGG - chr2_3:10142322-10142341 Msa0277560:three_prime_UTR 45.0%
CAGAACCTATGTGGCAATTG+GGG - chr2_3:10142323-10142342 Msa0277560:three_prime_UTR 45.0%
AGGTTATTGGAGCTGCTTCT+AGG - chr2_3:10142558-10142577 Msa0277560:three_prime_UTR 45.0%
ATAGAAAGAACCTGGCACAC+AGG + chr2_3:10142617-10142636 None:intergenic 45.0%
TCAGTAGCTCCTGTCTGTTT+CGG + chr2_3:10142960-10142979 None:intergenic 45.0%
GCTGGAATTTGTACACTAGC+AGG + chr2_3:10143237-10143256 None:intergenic 45.0%
CTGTACGGTTGGATACAATG+GGG + chr2_3:10143307-10143326 None:intergenic 45.0%
GTCTGTACGGTTGGATACAA+TGG + chr2_3:10143309-10143328 None:intergenic 45.0%
TGTTGTGAAGAAGGTCCAGA+TGG + chr2_3:10143333-10143352 None:intergenic 45.0%
AACGAACCATGTAGTAGAGG+TGG + chr2_3:10143378-10143397 None:intergenic 45.0%
GGACAATACCATAGGTCCAT+AGG + chr2_3:10143412-10143431 None:intergenic 45.0%
ATGGTTGGGGACAATACCAT+AGG + chr2_3:10143420-10143439 None:intergenic 45.0%
TATGGTATTGTCCCCAACCA+TGG - chr2_3:10143419-10143438 Msa0277560:intron 45.0%
CCAGAAAAAGGAACCATGGT+TGG + chr2_3:10143435-10143454 None:intergenic 45.0%
! CCAACCATGGTTCCTTTTTC+TGG - chr2_3:10143432-10143451 Msa0277560:intron 45.0%
!!! CATGGTTCCTTTTTCTGGCT+GGG - chr2_3:10143437-10143456 Msa0277560:intron 45.0%
!!! ATGGTTCCTTTTTCTGGCTG+GGG - chr2_3:10143438-10143457 Msa0277560:intron 45.0%
! TTGGCTTGACCTACCTGATA+AGG + chr2_3:10143465-10143484 None:intergenic 45.0%
! ATCGTTGAGCTCTTTGGTTC+AGG - chr2_3:10143539-10143558 Msa0277560:intron 45.0%
! GAGAACCAGAAGGAAGTACA+GGG + chr2_3:10143578-10143597 None:intergenic 45.0%
ACATTAGCTGGAGAACCAGA+AGG + chr2_3:10143588-10143607 None:intergenic 45.0%
!! TCTGGTTCTCCAGCTAATGT+TGG - chr2_3:10143588-10143607 Msa0277560:intron 45.0%
! TTGGCTCCACACAGCTTTAT+GGG - chr2_3:10143607-10143626 Msa0277560:intron 45.0%
GGTTATCCCATAAAGCTGTG+TGG + chr2_3:10143616-10143635 None:intergenic 45.0%
TCTGGTTGATTAGGACTTGC+TGG + chr2_3:10143735-10143754 None:intergenic 45.0%
AAAAGGAAGCTCCTCTGGTT+TGG + chr2_3:10143772-10143791 None:intergenic 45.0%
!! ACTTTTGGTGCACTCATGTC+TGG + chr2_3:10143822-10143841 None:intergenic 45.0%
! CTAAGGACGGCATTCACTTT+TGG + chr2_3:10143837-10143856 None:intergenic 45.0%
TTCATCTTCCCTCTTTCACC+TGG - chr2_3:10143951-10143970 Msa0277560:intron 45.0%
AGCATGAGCTCTATGAACAG+TGG + chr2_3:10144116-10144135 None:intergenic 45.0%
ATATGTTCTCTGCCAGAGCA+GGG - chr2_3:10144416-10144435 Msa0277560:intron 45.0%
! TTTTTACACTGGCCCAAGTC+GGG + chr2_3:10144969-10144988 None:intergenic 45.0%
CGCTGCAACGTAATTCTAAG+AGG - chr2_3:10145222-10145241 Msa0277560:intron 45.0%
! GCTCAAACCCAAGCGTTTTA+AGG + chr2_3:10145425-10145444 None:intergenic 45.0%
AAAACGCTTGGGTTTGAGCT+TGG - chr2_3:10145426-10145445 Msa0277560:intron 45.0%
CATGCGACTTAGTGGTTGTT+TGG - chr2_3:10145479-10145498 Msa0277560:intron 45.0%
TGCGACTTAGTGGTTGTTTG+GGG - chr2_3:10145481-10145500 Msa0277560:intron 45.0%
! GTTTGGGGTAACCTTTCAGT+TGG - chr2_3:10145496-10145515 Msa0277560:intron 45.0%
ATGTTCATGCCCCATAAGGT+AGG - chr2_3:10145528-10145547 Msa0277560:intron 45.0%
TGTTCATGCCCCATAAGGTA+GGG - chr2_3:10145529-10145548 Msa0277560:intron 45.0%
CCAGGGGAGATGCATATTTA+GGG + chr2_3:10145928-10145947 None:intergenic 45.0%
CAGCGATAAAACGGATGACA+GGG + chr2_3:10146326-10146345 None:intergenic 45.0%
TCAGCGATAAAACGGATGAC+AGG + chr2_3:10146327-10146346 None:intergenic 45.0%
!! AATCAGGAAGCACTCCAATC+TGG + chr2_3:10146443-10146462 None:intergenic 45.0%
AGCAATAACAGCTGAGTGGA+CGG + chr2_3:10146515-10146534 None:intergenic 45.0%
AGACAGCAATAACAGCTGAG+TGG + chr2_3:10146519-10146538 None:intergenic 45.0%
CAGCGTGGTATATGCAAGTT+TGG - chr2_3:10146755-10146774 Msa0277560:CDS 45.0%
CTGTAACTCAGTGGTGCAAT+AGG + chr2_3:10146803-10146822 None:intergenic 45.0%
TGCAACTGGTACATCTGTCA+GGG + chr2_3:10146840-10146859 None:intergenic 45.0%
ACGGATGAACCCACAAAGTA+GGG + chr2_3:10146863-10146882 None:intergenic 45.0%
AACGGATGAACCCACAAAGT+AGG + chr2_3:10146864-10146883 None:intergenic 45.0%
TACTTTGTGGGTTCATCCGT+TGG - chr2_3:10146863-10146882 Msa0277560:intron 45.0%
TTGGATCCTGCAGTAAGTTC+TGG + chr2_3:10146926-10146945 None:intergenic 45.0%
AACTTACTGCAGGATCCAAC+AGG - chr2_3:10146927-10146946 Msa0277560:intron 45.0%
ACTTACTGCAGGATCCAACA+GGG - chr2_3:10146928-10146947 Msa0277560:intron 45.0%
AGCACATCAACTGGATCAGT+TGG - chr2_3:10146983-10147002 Msa0277560:intron 45.0%
CGAGTGCTTGATTGAGAAAC+AGG + chr2_3:10147031-10147050 None:intergenic 45.0%
GAATGTGGAACTGGGATAAC+TGG + chr2_3:10147229-10147248 None:intergenic 45.0%
GCTAGATCTGAATGTGGAAC+TGG + chr2_3:10147238-10147257 None:intergenic 45.0%
AAAAAGGGTTCAGGTGGAAG+AGG + chr2_3:10147524-10147543 None:intergenic 45.0%
!! ATTATTATAATAAAATTTCT+AGG - chr2_3:10144139-10144158 Msa0277560:intron 5.0%
!!! ATAATAAGATAATAATTTTT+CGG - chr2_3:10145007-10145026 Msa0277560:intron 5.0%
AAAGTGTGTCTATGTCCGCG+TGG - chr2_3:10141984-10142003 Msa0277560:three_prime_UTR 50.0%
AAGTGTGTCTATGTCCGCGT+GGG - chr2_3:10141985-10142004 Msa0277560:three_prime_UTR 50.0%
TGAGTCTAGTCTAACCCACG+CGG + chr2_3:10142002-10142021 None:intergenic 50.0%
!! AGAAGACGGATCAGGTTGAG+TGG + chr2_3:10142195-10142214 None:intergenic 50.0%
GTCCATTGAGAAGACGGATC+AGG + chr2_3:10142203-10142222 None:intergenic 50.0%
GATCCGTCTTCTCAATGGAC+CGG - chr2_3:10142203-10142222 Msa0277560:three_prime_UTR 50.0%
CCTAACCCCAATTGCCACAT+AGG + chr2_3:10142331-10142350 None:intergenic 50.0%
CCTATGTGGCAATTGGGGTT+AGG - chr2_3:10142328-10142347 Msa0277560:three_prime_UTR 50.0%
ATGTGGCAATTGGGGTTAGG+TGG - chr2_3:10142331-10142350 Msa0277560:three_prime_UTR 50.0%
CTCATCAGGTCGTTGTGGAT+AGG + chr2_3:10142365-10142384 None:intergenic 50.0%
CTATCCACAACGACCTGATG+AGG - chr2_3:10142363-10142382 Msa0277560:three_prime_UTR 50.0%
TCAACCTCATCAGGTCGTTG+TGG + chr2_3:10142370-10142389 None:intergenic 50.0%
!! GTGGCTTTGGTTCTAGGTGT+CGG - chr2_3:10142419-10142438 Msa0277560:three_prime_UTR 50.0%
! AAGAGTTGATTACCGCGGCA+CGG + chr2_3:10142462-10142481 None:intergenic 50.0%
!! GAGCTGCTTCTAGGACTGTT+GGG - chr2_3:10142567-10142586 Msa0277560:exon 50.0%
!! AGCTGCTTCTAGGACTGTTG+GGG - chr2_3:10142568-10142587 Msa0277560:exon 50.0%
ACAAATTCCAGCTCCATCGC+CGG - chr2_3:10143245-10143264 Msa0277560:intron 50.0%
AAAGGTGAAACCGAGGGAAC+CGG + chr2_3:10143267-10143286 None:intergenic 50.0%
! GGATACAATGGGGAAGGTAC+TGG + chr2_3:10143297-10143316 None:intergenic 50.0%
ACGGTTGGATACAATGGGGA+AGG + chr2_3:10143303-10143322 None:intergenic 50.0%
AGGTCCAGATGGAGTCTGTA+CGG + chr2_3:10143322-10143341 None:intergenic 50.0%
!! AAATTGGGGTACTGGTCGCA+AGG - chr2_3:10143352-10143371 Msa0277560:intron 50.0%
CCAGCCAGAAAAAGGAACCA+TGG + chr2_3:10143439-10143458 None:intergenic 50.0%
!! CCATGGTTCCTTTTTCTGGC+TGG - chr2_3:10143436-10143455 Msa0277560:intron 50.0%
TAAGGACCCCAGCCAGAAAA+AGG + chr2_3:10143447-10143466 None:intergenic 50.0%
ACAAGCCCTGTACTTCCTTC+TGG - chr2_3:10143570-10143589 Msa0277560:intron 50.0%
! GGAGAACCAGAAGGAAGTAC+AGG + chr2_3:10143579-10143598 None:intergenic 50.0%
TGTGTGGAGCCAACATTAGC+TGG + chr2_3:10143600-10143619 None:intergenic 50.0%
! GTTGGCTCCACACAGCTTTA+TGG - chr2_3:10143606-10143625 Msa0277560:intron 50.0%
GATAACCCAGCTACCTTCAC+CGG - chr2_3:10143629-10143648 Msa0277560:intron 50.0%
ATAACCCAGCTACCTTCACC+GGG - chr2_3:10143630-10143649 Msa0277560:intron 50.0%
ATTACCCGGTGAAGGTAGCT+GGG + chr2_3:10143637-10143656 None:intergenic 50.0%
GTATAGGCATTACCCGGTGA+AGG + chr2_3:10143645-10143664 None:intergenic 50.0%
TCACCGGGTAATGCCTATAC+TGG - chr2_3:10143645-10143664 Msa0277560:intron 50.0%
GGTCCAGTATAGGCATTACC+CGG + chr2_3:10143651-10143670 None:intergenic 50.0%
! TTTGGTGCACTCATGTCTGG+TGG + chr2_3:10143819-10143838 None:intergenic 50.0%
GAAAGAGGGAAGATGAACCG+TGG + chr2_3:10143948-10143967 None:intergenic 50.0%
CTGGGGAAGTTCTGTCTGTA+AGG - chr2_3:10144368-10144387 Msa0277560:intron 50.0%
GATATGTTCTCTGCCAGAGC+AGG - chr2_3:10144415-10144434 Msa0277560:intron 50.0%
GTACACACTATTCCCTGCTC+TGG + chr2_3:10144431-10144450 None:intergenic 50.0%
AAATTTGTCCGGTCCCGACT+TGG - chr2_3:10144953-10144972 Msa0277560:intron 50.0%
AATTTGTCCGGTCCCGACTT+GGG - chr2_3:10144954-10144973 Msa0277560:intron 50.0%
!! TACCGACTCCCTACCTTATG+GGG + chr2_3:10145540-10145559 None:intergenic 50.0%
!! CTACCGACTCCCTACCTTAT+GGG + chr2_3:10145541-10145560 None:intergenic 50.0%
!! TCTACCGACTCCCTACCTTA+TGG + chr2_3:10145542-10145561 None:intergenic 50.0%
GGAGTCGGTAGAGAGTGATT+AGG - chr2_3:10145550-10145569 Msa0277560:intron 50.0%
GAGGACGGGTGTAACATTTC+AGG - chr2_3:10145656-10145675 Msa0277560:intron 50.0%
!! TGTTGCTGACTCGATGCAGT+GGG - chr2_3:10145825-10145844 Msa0277560:CDS 50.0%
CCCTAAATATGCATCTCCCC+TGG - chr2_3:10145925-10145944 Msa0277560:CDS 50.0%
GCCAGGGGAGATGCATATTT+AGG + chr2_3:10145929-10145948 None:intergenic 50.0%
TGCGGAAAATAGGGATGCCA+GGG + chr2_3:10145945-10145964 None:intergenic 50.0%
!! GCAGATGGACTGTAACTCAG+TGG + chr2_3:10146812-10146831 None:intergenic 50.0%
TGGTACATCTGTCAGGGAAG+AGG + chr2_3:10146834-10146853 None:intergenic 50.0%
GTGCAACTGGTACATCTGTC+AGG + chr2_3:10146841-10146860 None:intergenic 50.0%
ACCAGTTGCACCCTACTTTG+TGG - chr2_3:10146850-10146869 Msa0277560:intron 50.0%
CCAGTTGCACCCTACTTTGT+GGG - chr2_3:10146851-10146870 Msa0277560:intron 50.0%
! GTAAGTTCTGGCTGCAACTC+TGG + chr2_3:10146914-10146933 None:intergenic 50.0%
TTGCAGCCAGAACTTACTGC+AGG - chr2_3:10146917-10146936 Msa0277560:intron 50.0%
AGAAGGAACAGACTCCCTGT+TGG + chr2_3:10146945-10146964 None:intergenic 50.0%
!! GTTGGCTTGACTTTGCCAAC+TGG - chr2_3:10147001-10147020 Msa0277560:intron 50.0%
!! GTGGTATTGGCAGGTGCTAA+AGG + chr2_3:10147064-10147083 None:intergenic 50.0%
!! CTACTTGTCGTGGTATTGGC+AGG + chr2_3:10147073-10147092 None:intergenic 50.0%
CTAAAGCAAGGCGGCTGTAT+GGG + chr2_3:10147357-10147376 None:intergenic 50.0%
! TCTAAAGCAAGGCGGCTGTA+TGG + chr2_3:10147358-10147377 None:intergenic 50.0%
GTGGATGGACATGTGCACAA+TGG + chr2_3:10147405-10147424 None:intergenic 50.0%
! GTGGAAGAGGCGTAAACACA+TGG + chr2_3:10147511-10147530 None:intergenic 50.0%
GTTGAGTGGAGCGAGGAAAG+TGG + chr2_3:10142181-10142200 None:intergenic 55.0%
GGTCCGGTCCATTGAGAAGA+CGG + chr2_3:10142209-10142228 None:intergenic 55.0%
GTCTTCTCAATGGACCGGAC+CGG - chr2_3:10142208-10142227 Msa0277560:three_prime_UTR 55.0%
ACCGGACCGGATTCTCAAAC+CGG - chr2_3:10142221-10142240 Msa0277560:three_prime_UTR 55.0%
!! ACCGGTTTGAGAATCCGGTC+CGG + chr2_3:10142225-10142244 None:intergenic 55.0%
!! GGAGCTGCTTCTAGGACTGT+TGG - chr2_3:10142566-10142585 Msa0277560:exon 55.0%
!! GGGGAGTATCCTGAACGTGT+TGG - chr2_3:10142587-10142606 Msa0277560:CDS 55.0%
ACAGGCTGTCCAACACGTTC+AGG + chr2_3:10142599-10142618 None:intergenic 55.0%
CCAGATGGAGTCTGTACGGT+TGG + chr2_3:10143318-10143337 None:intergenic 55.0%
CCAACCGTACAGACTCCATC+TGG - chr2_3:10143315-10143334 Msa0277560:intron 55.0%
GCAAGGCCACCTCTACTACA+TGG - chr2_3:10143369-10143388 Msa0277560:intron 55.0%
TCGTTTGTCCAGAGCCCCTA+TGG - chr2_3:10143393-10143412 Msa0277560:intron 55.0%
! TTCTGGCTGGGGTCCTTATC+AGG - chr2_3:10143449-10143468 Msa0277560:intron 55.0%
CATTACCCGGTGAAGGTAGC+TGG + chr2_3:10143638-10143657 None:intergenic 55.0%
TCTGCTTGAAGGACCGACTG+AGG + chr2_3:10143691-10143710 None:intergenic 55.0%
GGAGCAAAAGGAAGCTCCTC+TGG + chr2_3:10143777-10143796 None:intergenic 55.0%
TGCCCCATAAGGTAGGGAGT+CGG - chr2_3:10145535-10145554 Msa0277560:intron 55.0%
GCATCGAGTCAGCAACACAG+TGG + chr2_3:10145822-10145841 None:intergenic 55.0%
!! GTGTTGCTGACTCGATGCAG+TGG - chr2_3:10145824-10145843 Msa0277560:CDS 55.0%
!! GTTGCTGACTCGATGCAGTG+GGG - chr2_3:10145826-10145845 Msa0277560:CDS 55.0%
GCGGAAAATAGGGATGCCAG+GGG + chr2_3:10145944-10145963 None:intergenic 55.0%
GTGCGGAAAATAGGGATGCC+AGG + chr2_3:10145946-10145965 None:intergenic 55.0%
TGCACTCATTACGCACAGCG+TGG - chr2_3:10146740-10146759 Msa0277560:CDS 55.0%
TCTGTCAGGGAAGAGGCAGA+TGG + chr2_3:10146827-10146846 None:intergenic 55.0%
CCCACAAAGTAGGGTGCAAC+TGG + chr2_3:10146854-10146873 None:intergenic 55.0%
GGCTTGACTTTGCCAACTGG+TGG - chr2_3:10147004-10147023 Msa0277560:intron 55.0%
TGAGAAACAGGGCCACCAGT+TGG + chr2_3:10147019-10147038 None:intergenic 55.0%
!! GGATCAGGTTGAGTGGAGCG+AGG + chr2_3:10142188-10142207 None:intergenic 60.0%
TGTTGGACAGCCTGTGTGCC+AGG - chr2_3:10142604-10142623 Msa0277560:CDS 60.0%
CCATAGGTCCATAGGGGCTC+TGG + chr2_3:10143404-10143423 None:intergenic 60.0%
CCAGAGCCCCTATGGACCTA+TGG - chr2_3:10143401-10143420 Msa0277560:intron 60.0%
GGCTGGGGTCCTTATCAGGT+AGG - chr2_3:10143453-10143472 Msa0277560:intron 60.0%
AATGCCGTCCTTAGCCCTGC+AGG - chr2_3:10143843-10143862 Msa0277560:intron 60.0%
ATGCCGTCCTTAGCCCTGCA+GGG - chr2_3:10143844-10143863 Msa0277560:intron 60.0%
AAGCCCTGCAGGGCTAAGGA+CGG + chr2_3:10143850-10143869 None:intergenic 60.0%
! GACGTAACGGAAGCCCTGCA+GGG + chr2_3:10143860-10143879 None:intergenic 60.0%
TGCAGGGCTTCCGTTACGTC+CGG - chr2_3:10143860-10143879 Msa0277560:intron 60.0%
! CTGACTCGATGCAGTGGGGA+TGG - chr2_3:10145830-10145849 Msa0277560:CDS 60.0%
TCATCCTCGTGACCGTGCCG+CGG - chr2_3:10142447-10142466 Msa0277560:three_prime_UTR 65.0%
ATTACCGCGGCACGGTCACG+AGG + chr2_3:10142454-10142473 None:intergenic 65.0%
!! AGCTCCATCGCCGGTTCCCT+CGG - chr2_3:10143254-10143273 Msa0277560:intron 65.0%
GAAACCGAGGGAACCGGCGA+TGG + chr2_3:10143261-10143280 None:intergenic 65.0%
ACGGAAGCCCTGCAGGGCTA+AGG + chr2_3:10143854-10143873 None:intergenic 65.0%
! GGACGTAACGGAAGCCCTGC+AGG + chr2_3:10143861-10143880 None:intergenic 65.0%
ACACTGGCCCAAGTCGGGAC+CGG + chr2_3:10144964-10144983 None:intergenic 65.0%
GAGGGAACCGGCGATGGAGC+TGG + chr2_3:10143255-10143274 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 10141892 10147804 10141892 ID=Msa0277560;Name=Msa0277560
chr2_3 mRNA 10141892 10147804 10141892 ID=Msa0277560-mRNA-1;Parent=Msa0277560;Name=Msa0277560-mRNA-1;_AED=0.05;_eAED=0.05;_QI=261|1|1|1|0.85|0.75|8|687|478
chr2_3 exon 10141892 10142968 10141892 ID=Msa0277560-mRNA-1:exon:4521;Parent=Msa0277560-mRNA-1
chr2_3 exon 10145815 10146135 10145815 ID=Msa0277560-mRNA-1:exon:4520;Parent=Msa0277560-mRNA-1
chr2_3 exon 10146226 10146540 10146226 ID=Msa0277560-mRNA-1:exon:4519;Parent=Msa0277560-mRNA-1
chr2_3 exon 10146671 10146793 10146671 ID=Msa0277560-mRNA-1:exon:4518;Parent=Msa0277560-mRNA-1
chr2_3 exon 10147071 10147136 10147071 ID=Msa0277560-mRNA-1:exon:4517;Parent=Msa0277560-mRNA-1
chr2_3 exon 10147228 10147370 10147228 ID=Msa0277560-mRNA-1:exon:4516;Parent=Msa0277560-mRNA-1
chr2_3 exon 10147445 10147589 10147445 ID=Msa0277560-mRNA-1:exon:4515;Parent=Msa0277560-mRNA-1
chr2_3 exon 10147610 10147804 10147610 ID=Msa0277560-mRNA-1:exon:4514;Parent=Msa0277560-mRNA-1
chr2_3 five_prime_UTR 10147610 10147804 10147610 ID=Msa0277560-mRNA-1:five_prime_utr;Parent=Msa0277560-mRNA-1
chr2_3 five_prime_UTR 10147524 10147589 10147524 ID=Msa0277560-mRNA-1:five_prime_utr;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10147445 10147523 10147445 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10147228 10147370 10147228 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10147071 10147136 10147071 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10146671 10146793 10146671 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10146226 10146540 10146226 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10145815 10146135 10145815 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 CDS 10142579 10142968 10142579 ID=Msa0277560-mRNA-1:cds;Parent=Msa0277560-mRNA-1
chr2_3 three_prime_UTR 10141892 10142578 10141892 ID=Msa0277560-mRNA-1:three_prime_utr;Parent=Msa0277560-mRNA-1
Gene Sequence

>Msa0277560

ATGGACCACTTTCCTCGCTCCACTCAACCTGATCCGTCTTCTCAATGGACCGGACCGGATTCTCAAACCGGTTTAGAAGAACCTATGTGGCAATTGGGGTTAGGTGGTGAAGATTCCTATCCACAACGACCTGATGAGGTTGATTGCACTTACTATTTGAGAACTGGTTTTTGTGGCTTTGGTTCTAGGTGTCGGTTCAATCATCCTCGTGACCGTGCCGCGGTTATTGGAGCTGCTTCTAGGACTGTTGGGGAGTATCCTGAACGTGTTGGACAGCCTGTGTGCCAGTATTATATGAGGACAAGATCTTGCAAATTTGGTGCGTCTTGCAAGTATCATCATCCGAAACAGACAGGAGCTACTGATGCTAGCCCTGTTTCACTAAATTATTATGGATATCCGTTACGTCCGGGTGAAAAGGAATGTTCATATTTTGTGAAAACGGGACAATGCAAGTTTGGTGCAACTTGTAAATTTGATCATCCAGTTCCTGCTAGTGTACAAATTCCAGCTCCATCGCCGGTTCCCTCGGTTTCACCTTTACATGTACCAGTACCTTCCCCATTGTATCCAACCGTACAGACTCCATCTGGACCTTCTTCACAACAAATTGGGGTACTGGTCGCAAGGCCACCTCTACTACATGGTTCGTTTGTCCAGAGCCCCTATGGACCTATGGTATTGTCCCCAACCATGGTTCCTTTTTCTGGCTGGGGTCCTTATCAGGCTACTGCAACAAGCCCTGTACTTCCTTCTGGTTCTCCAGCTAATGTTGGCTCCACACAGCTTTATGGGATAACCCAGCTACCTTCACCGGGTAATGCCTATACTGGACCTTATCAATTTTCTGGTTCCTCAGTCGGTCCTTCAAGCAGAAATCAGAACGAGCAATCATTTCCAGCAAGTCCTAATCAACCAGAGTATCATTATTACTCCAAACCAGAGGAGCTTCCTTTTGCTCCATCTTATAGGTATCACAAACCACCAGACATGAGTGCACCAAAAGTGAATGCCGTCCTTAGCCCTGCAGGGCTTCCGTTACGTCCGGGAGCAGCACTCTGCACTCATTACGCACAGCGTGGTATATGCAAGTTTGGTCCTGCATGCAAATTTGATCATCCTATTGCACCACTGAGTTACAGTCCATCTGCCTCTTCCCTGACAGATGTACCAGTTGCACCCTACTTTGTGGGTTCATCCGTTGGTACTCTTGTTCCTTCATCTTCTTCACCAGAGTTGCAGCCAGAACTTACTGCAGGATCCAACAGGGAGTCTGTTCCTTCTAGAATATCGTCATCAGTAAGCACATCAACTGGATCAGTTGGCTTGACTTTGCCAACTGGTGGCCCTGTTTCTCAATCAAGCACTCGAAGTTCTAGTCCTTTAGCACCTGCCAATACCACGACAAGTAGCAATGTTTCTCACCCCTCAAATTAA
Protein sequence

>Msa0277560

MDHFPRSTQPDPSSQWTGPDSQTGLEEPMWQLGLGGEDSYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVIGAASRTVGEYPERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPVPSVSPLHVPVPSPLYPTVQTPSGPSSQQIGVLVARPPLLHGSFVQSPYGPMVLSPTMVPFSGWGPYQATATSPVLPSGSPANVGSTQLYGITQLPSPGNAYTGPYQFSGSSVGPSSRNQNEQSFPASPNQPEYHYYSKPEELPFAPSYRYHKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPACKFDHPIAPLSYSPSASSLTDVPVAPYFVGSSVGTLVPSSSSPELQPELTAGSNRESVPSRISSSVSTSTGSVGLTLPTGGPVSQSSTRSSSPLAPANTTTSSNVSHPSN*