AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0277780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277780 MtrunA17_Chr2g0290711 96.199 342 13 0 1 342 1 342 0.0 682
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0277780 AT5G47770.1 78.006 341 75 0 2 342 44 384 0.0 571
Msa0277780 AT4G17190.1 77.193 342 78 0 1 342 1 342 0.0 561
Msa0277780 AT4G17190.3 79.730 296 60 0 47 342 10 305 0.0 504
Msa0277780 AT4G17190.2 80.162 247 49 0 96 342 1 247 2.93e-151 425

Find 140 sgRNAs with CRISPR-Local

Find 660 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCACCTTTCCAATTGTTTC+AGG 0.147131 2_3:-10562517 None:intergenic
TCCTAAAATTGCATTATTAT+TGG 0.151078 2_3:-10559174 None:intergenic
TCTCATTCAGGATGATTATT+TGG 0.171673 2_3:+10562480 Msa0277780:intron
TTGATCTGCTGTTTAATTAT+TGG 0.186821 2_3:+10563727 Msa0277780:three_prime_UTR
TGATCTGCTGTTTAATTATT+GGG 0.234251 2_3:+10563728 Msa0277780:three_prime_UTR
AAAATAATTTATTATGTCTT+TGG 0.239472 2_3:+10559075 Msa0277780:five_prime_UTR
CCTAAAATTGCATTATTATT+GGG 0.255475 2_3:-10559173 None:intergenic
CATTTAAATGTTGTTGGTTA+TGG 0.256594 2_3:+10564124 Msa0277780:three_prime_UTR
CGAGATTAAGCTCGTTATAA+AGG 0.264877 2_3:-10562842 None:intergenic
TCCTAAGGATACGCGGAATA+TGG 0.280724 2_3:-10560991 None:intergenic
TGTGAAAGAAACATAGAAAA+TGG 0.282768 2_3:+10563595 Msa0277780:three_prime_UTR
TCTTGTTCTTGACGACATTA+TGG 0.285569 2_3:+10560788 Msa0277780:CDS
AGCAGTATTGAAGTCCTTCT+TGG 0.310069 2_3:+10563287 Msa0277780:CDS
TCACAGTGATAAGGTGTATT+TGG 0.310978 2_3:-10561218 None:intergenic
AAAATGGATAGAGGAAATAA+AGG 0.317304 2_3:+10563611 Msa0277780:three_prime_UTR
AAGTTTAACCAATCATATTA+AGG 0.319300 2_3:-10563676 None:intergenic
TGTGGTGAACAGGAGAACTA+TGG 0.319745 2_3:+10562783 Msa0277780:intron
ATTCTCGTCAATGGGTTGAT+AGG 0.349932 2_3:+10559353 Msa0277780:CDS
TTCTCTCTCATTTCCATCAA+TGG 0.358198 2_3:+10559246 Msa0277780:exon
GGTAGTTGCCTTAATATGAT+TGG 0.367346 2_3:+10563668 Msa0277780:three_prime_UTR
ATAATATAGCGAACAGTTGC+AGG 0.367448 2_3:+10563948 Msa0277780:three_prime_UTR
TTGACTATAGCAACATTTGC+AGG 0.368701 2_3:-10562816 None:intergenic
TTGAAGACTTTAAGTGCTCT+TGG 0.374180 2_3:+10562627 Msa0277780:CDS
TACTGCTTGAACTGCACTGC+TGG 0.374612 2_3:-10563271 None:intergenic
TCGGTACATTTAAATGTTGT+TGG 0.375382 2_3:+10564118 Msa0277780:three_prime_UTR
CTCTTGGTTGGTGCATTGAA+TGG 0.402536 2_3:+10560637 Msa0277780:CDS
CAAAATTCCCAACATCATCT+TGG 0.403595 2_3:-10564156 None:intergenic
AAATGGATAGAGGAAATAAA+GGG 0.411938 2_3:+10563612 Msa0277780:three_prime_UTR
ATGGCTGACCACGACGTGTA+TGG 0.415175 2_3:-10560818 None:intergenic
CCGGTGAGTGTGGTTGGCGT+GGG 0.418108 2_3:-10559107 None:intergenic
GATGATTATTTGGATTGCTT+TGG 0.419545 2_3:+10562490 Msa0277780:CDS
GTTGAGTTTCAAACTGCTGC+TGG 0.420249 2_3:+10561148 Msa0277780:CDS
CAGAAGTAGATTTCCCTTGT+AGG 0.422258 2_3:+10563327 Msa0277780:exon
ATAGCAACATTTGCAGGATC+TGG 0.426079 2_3:-10562810 None:intergenic
TACTTAAGCCTTCCCCTGCT+CGG 0.432552 2_3:-10564076 None:intergenic
CAGATTTACACAAGTGCAGC+AGG 0.434422 2_3:+10564033 Msa0277780:three_prime_UTR
TTGCAATGAAGAACAAAAGA+AGG 0.435483 2_3:+10562673 Msa0277780:CDS
ACTAATGGCTGGTGAAGATC+TGG 0.438016 2_3:+10562277 Msa0277780:CDS
TTTATGTACTCACAGTGATA+AGG 0.440398 2_3:-10561227 None:intergenic
TCCAACTCGAAATCAACATT+TGG 0.440685 2_3:-10564280 None:intergenic
TGAAGACTTTAAGTGCTCTT+GGG 0.443835 2_3:+10562628 Msa0277780:CDS
TAGCGAACAGTTGCAGGAAC+AGG 0.445801 2_3:+10563954 Msa0277780:three_prime_UTR
GTCAGCTCCACACAGAAAAC+AGG 0.449743 2_3:-10563396 None:intergenic
TCCTCAGACCACTCGAAAGC+AGG 0.450781 2_3:-10559331 None:intergenic
TTTGGTGATCCTGAAACAAT+TGG 0.452410 2_3:+10562508 Msa0277780:CDS
TACACAAGTGCAGCAGGGTC+AGG 0.453632 2_3:+10564039 Msa0277780:three_prime_UTR
GCCGGTGAGTGTGGTTGGCG+TGG 0.454913 2_3:-10559108 None:intergenic
GTCTGAGGATTCTCGTCAAT+GGG 0.454993 2_3:+10559345 Msa0277780:CDS
TCAAGAAGTTCAACATAATA+CGG 0.457431 2_3:-10561031 None:intergenic
GATGAAGTAAATAGAGAAGA+AGG 0.459696 2_3:+10563912 Msa0277780:three_prime_UTR
GAGATTAAGCTCGTTATAAA+GGG 0.459820 2_3:-10562841 None:intergenic
AAAGAGAGATGCTGCACAGC+CGG 0.466199 2_3:-10559126 None:intergenic
TTCCCTTGAAGTGTTTCCTA+AGG 0.467529 2_3:-10561006 None:intergenic
GACTTGAGATCTGCCATTGA+TGG 0.470370 2_3:-10559259 None:intergenic
CATATTAAGGCAACTACCAT+TGG 0.471122 2_3:-10563663 None:intergenic
AAAGAACATTCTTGTTGAGA+TGG 0.473997 2_3:+10562316 Msa0277780:CDS
ACCATATTCCGCGTATCCTT+AGG 0.482141 2_3:+10560990 Msa0277780:CDS
TGCAGCAGGGTCAGGTTTGG+TGG 0.484303 2_3:+10564047 Msa0277780:three_prime_UTR
GGTCTGAGGATTCTCGTCAA+TGG 0.485094 2_3:+10559344 Msa0277780:CDS
ACATTGTTTGAAGATGCAAT+AGG 0.485380 2_3:+10563360 Msa0277780:three_prime_UTR
GAAATGAGAGAGAAAGAAAG+AGG 0.487302 2_3:-10559237 None:intergenic
TATCCTTAGGAAACACTTCA+AGG 0.492202 2_3:+10561003 Msa0277780:CDS
TCTTGGTTGGTGCATTGAAT+GGG 0.494224 2_3:+10560638 Msa0277780:CDS
TGTAAACTGTCTTGTGACAC+TGG 0.497836 2_3:+10563485 Msa0277780:three_prime_UTR
GAAACATAGAAAATGGATAG+AGG 0.503294 2_3:+10563602 Msa0277780:three_prime_UTR
ATTATTGGGAGAATAAATAG+AGG 0.504351 2_3:-10559159 None:intergenic
TCCAAGCTAGTGCTCTTGGT+TGG 0.504745 2_3:+10560625 Msa0277780:CDS
AACAGTTGCAGGAACAGGAT+TGG 0.506063 2_3:+10563959 Msa0277780:three_prime_UTR
ATGTTGGTATTTGTCCTACA+AGG 0.508631 2_3:-10563341 None:intergenic
TGAGAGAGAAAGAAAGAGGG+TGG 0.509584 2_3:-10559233 None:intergenic
AAAATAGTCTACAACCCTCT+TGG 0.515575 2_3:-10564305 None:intergenic
GGAATGATTGCTGCGAATGA+TGG 0.516786 2_3:+10560953 Msa0277780:CDS
ACCACTCGAAAGCAGGGTCA+TGG 0.517327 2_3:-10559324 None:intergenic
GCACAGCCGGTGAGTGTGGT+TGG 0.517522 2_3:-10559113 None:intergenic
GAATGTATAGGGTGCATTTG+CGG 0.518977 2_3:+10563197 Msa0277780:intron
TGGCTGACCACGACGTGTAT+GGG 0.519560 2_3:-10560817 None:intergenic
TTCTCGTCAATGGGTTGATA+GGG 0.520759 2_3:+10559354 Msa0277780:CDS
AAGAACATTCTTGTTGAGAT+GGG 0.521436 2_3:+10562317 Msa0277780:CDS
AAGTGCAGCAGGGTCAGGTT+TGG 0.526753 2_3:+10564044 Msa0277780:three_prime_UTR
TCCAAATGTTGATTTCGAGT+TGG 0.529065 2_3:+10564279 Msa0277780:three_prime_UTR
CCCTGCTTTCGAGTGGTCTG+AGG 0.529792 2_3:+10559330 Msa0277780:CDS
CCCGTGTGTGTGTCGGATAT+AGG 0.529858 2_3:+10564205 Msa0277780:three_prime_UTR
CCGATTGTTAAAAGAAGGAC+AGG 0.537482 2_3:+10560581 Msa0277780:CDS
GTCGGATATAGGTGAAGCAT+TGG 0.538354 2_3:+10564216 Msa0277780:three_prime_UTR
AGCTACCGATTGTTAAAAGA+AGG 0.538591 2_3:+10560576 Msa0277780:CDS
CCCACGCCAACCACACTCAC+CGG 0.539111 2_3:+10559107 Msa0277780:five_prime_UTR
ATTGCATCTTCAAACAATGT+TGG 0.539226 2_3:-10563357 None:intergenic
GTTGCAGGAACAGGATTGGC+AGG 0.540388 2_3:+10563963 Msa0277780:three_prime_UTR
CACGTCGTGGTCAGCCATGT+TGG 0.540988 2_3:+10560823 Msa0277780:CDS
GTGATAAGGTGTATTTGGAC+AGG 0.546327 2_3:-10561213 None:intergenic
TCGGATATAGGTGAAGCATT+GGG 0.547463 2_3:+10564217 Msa0277780:three_prime_UTR
ACCAACCAAGAGCACTAGCT+TGG 0.550761 2_3:-10560626 None:intergenic
AAATGAGAGAGAAAGAAAGA+GGG 0.551482 2_3:-10559236 None:intergenic
ACCTATATCCGACACACACA+CGG 0.552322 2_3:-10564206 None:intergenic
TGTGCATCCAAGATGATGTT+GGG 0.557801 2_3:+10564149 Msa0277780:three_prime_UTR
TGGGAGAATAAATAGAGGAA+TGG 0.562637 2_3:-10559154 None:intergenic
GGTTGCATGTGCATTACTAA+TGG 0.564966 2_3:+10562262 Msa0277780:intron
ATGTTGGTTTAGAGTACCCA+AGG 0.567818 2_3:+10560839 Msa0277780:CDS
GTGGTGAACAGGAGAACTAT+GGG 0.570700 2_3:+10562784 Msa0277780:intron
TGCTGCACAGCCGGTGAGTG+TGG 0.572823 2_3:-10559117 None:intergenic
TTGGGTGGTTGTGAAAGCAT+TGG 0.575145 2_3:+10562646 Msa0277780:CDS
TTATAACGAGCTTAATCTCG+AGG 0.575890 2_3:+10562845 Msa0277780:CDS
TCCATGACCCTGCTTTCGAG+TGG 0.576232 2_3:+10559323 Msa0277780:CDS
TTTCGAGTTGGATGCCAAGA+GGG 0.578061 2_3:+10564291 Msa0277780:three_prime_UTR
CCTATATCCGACACACACAC+GGG 0.579419 2_3:-10564205 None:intergenic
GCATGTGCATTACTAATGGC+TGG 0.579792 2_3:+10562266 Msa0277780:CDS
AGCAGGGTCATGGAGAAGCT+CGG 0.583918 2_3:-10559314 None:intergenic
GTCAAGCCCCGTGTGTGTGT+CGG 0.584280 2_3:+10564198 Msa0277780:three_prime_UTR
AGACTTTAAGTGCTCTTGGG+TGG 0.587887 2_3:+10562631 Msa0277780:CDS
CCTCAGACCACTCGAAAGCA+GGG 0.588733 2_3:-10559330 None:intergenic
ACTGCTTGAACTGCACTGCT+GGG 0.591941 2_3:-10563270 None:intergenic
GTTTGTCACAAGCTATTCAG+TGG 0.598148 2_3:+10564239 Msa0277780:three_prime_UTR
CGGTGAGTGTGGTTGGCGTG+GGG 0.600773 2_3:-10559106 None:intergenic
ACTTCTTGATTTATTCAATG+AGG 0.600835 2_3:+10561045 Msa0277780:CDS
AGAGTAGACATTCAAGAATG+TGG 0.605616 2_3:-10559281 None:intergenic
AAGATGCAATAGGAGCTAGC+TGG 0.605998 2_3:+10563370 Msa0277780:three_prime_UTR
TGTTGGTATTTGTCCTACAA+GGG 0.609648 2_3:-10563340 None:intergenic
TTATAGTAGCAAACTTCCAA+TGG 0.615369 2_3:+10563647 Msa0277780:three_prime_UTR
ATGTGCATCCAAGATGATGT+TGG 0.617601 2_3:+10564148 Msa0277780:three_prime_UTR
TTTGTCACAAGCTATTCAGT+GGG 0.618720 2_3:+10564240 Msa0277780:three_prime_UTR
TTGTGAAAACAAGGACGATG+TGG 0.619742 2_3:+10564176 Msa0277780:three_prime_UTR
TCAAGTTCAGAGATAGACCA+TGG 0.620633 2_3:+10563565 Msa0277780:three_prime_UTR
GATTTGATCACCACACTGGA+AGG 0.625103 2_3:+10561181 Msa0277780:CDS
ATCCTTAGGAAACACTTCAA+GGG 0.625790 2_3:+10561004 Msa0277780:CDS
TGTCGATAACTGACAGTCCA+CGG 0.626037 2_3:-10560554 None:intergenic
TCTTGGCTAAAATTTACAAG+AGG 0.627016 2_3:+10563304 Msa0277780:CDS
GAATGTTCTTTACATCAACA+TGG 0.628388 2_3:-10562304 None:intergenic
TTCTTTCACAGGCAAAACCA+TGG 0.631764 2_3:-10563582 None:intergenic
GATCGATTTGATCACCACAC+TGG 0.647023 2_3:+10561177 Msa0277780:CDS
ATTTCGAGTTGGATGCCAAG+AGG 0.662942 2_3:+10564290 Msa0277780:three_prime_UTR
AGATTTACACAAGTGCAGCA+GGG 0.679813 2_3:+10564034 Msa0277780:three_prime_UTR
TGATCCTGAAACAATTGGAA+AGG 0.681979 2_3:+10562513 Msa0277780:CDS
TTGGGTACTCTAAACCAACA+TGG 0.682317 2_3:-10560837 None:intergenic
GACAACTCCCATACACGTCG+TGG 0.685129 2_3:+10560810 Msa0277780:CDS
CTATATCCGACACACACACG+GGG 0.691294 2_3:-10564204 None:intergenic
ATGGCAGGGAAGCTGAACCG+TGG 0.698541 2_3:+10560537 Msa0277780:intron
AAGTGTTTCCTAAGGATACG+CGG 0.701381 2_3:-10560998 None:intergenic
GCTGGGATGAGCTTCAATCG+AGG 0.703794 2_3:-10563253 None:intergenic
TCTTGTACTGAACAATACGC+CGG 0.718334 2_3:-10561719 None:intergenic
GGGAAGGCTTAAGTACAACG+TGG 0.767317 2_3:+10564084 Msa0277780:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATTTATTATGTCTT+TGG + chr2_3:10559075-10559094 Msa0277780:five_prime_UTR 10.0%
!!! TTATTTTGATTAAATTTAAG+TGG + chr2_3:10559549-10559568 Msa0277780:intron 10.0%
!!! TATTTTGATTAAATTTAAGT+GGG + chr2_3:10559550-10559569 Msa0277780:intron 10.0%
!!! AAGTTACTTTTTTTTATTAA+TGG + chr2_3:10562020-10562039 Msa0277780:intron 10.0%
!! AAAATAATTTATTATGTCTT+TGG + chr2_3:10559075-10559094 Msa0277780:five_prime_UTR 10.0%
!!! TTATTTTGATTAAATTTAAG+TGG + chr2_3:10559549-10559568 Msa0277780:intron 10.0%
!!! TATTTTGATTAAATTTAAGT+GGG + chr2_3:10559550-10559569 Msa0277780:intron 10.0%
!!! AAGTTACTTTTTTTTATTAA+TGG + chr2_3:10562020-10562039 Msa0277780:intron 10.0%
!!! TTTAATGGTTTTATATTTTG+TGG + chr2_3:10559825-10559844 Msa0277780:intron 15.0%
!!! ATGTATGATTTTGTTTATTA+TGG + chr2_3:10559980-10559999 Msa0277780:intron 15.0%
!! ATTTATCTTATGTATACATT+TGG + chr2_3:10560142-10560161 Msa0277780:intron 15.0%
!!! ATATTATTTTTGTTGTTGTA+GGG + chr2_3:10560892-10560911 Msa0277780:intron 15.0%
!!! TTTTATGTTATTGTTAGTAT+TGG + chr2_3:10561312-10561331 Msa0277780:intron 15.0%
!! AAAATAAGTAATTTCGTTAA+GGG - chr2_3:10562143-10562162 None:intergenic 15.0%
!! AAAAATAAGTAATTTCGTTA+AGG - chr2_3:10562144-10562163 None:intergenic 15.0%
!! AAAGATAAATAACATAAAAC+AGG - chr2_3:10562218-10562237 None:intergenic 15.0%
!!! ATTTTTTTTTCCTTCTAAAA+TGG - chr2_3:10562910-10562929 None:intergenic 15.0%
!!! TATTTGAAATTTGAATGTAT+AGG + chr2_3:10563185-10563204 Msa0277780:intron 15.0%
!!! ATTTGAAATTTGAATGTATA+GGG + chr2_3:10563186-10563205 Msa0277780:intron 15.0%
!!! TTTAATGGTTTTATATTTTG+TGG + chr2_3:10559825-10559844 Msa0277780:intron 15.0%
!!! ATGTATGATTTTGTTTATTA+TGG + chr2_3:10559980-10559999 Msa0277780:intron 15.0%
!! ATTTATCTTATGTATACATT+TGG + chr2_3:10560142-10560161 Msa0277780:intron 15.0%
!!! ATATTATTTTTGTTGTTGTA+GGG + chr2_3:10560892-10560911 Msa0277780:intron 15.0%
!!! TTTTATGTTATTGTTAGTAT+TGG + chr2_3:10561312-10561331 Msa0277780:intron 15.0%
!! AAAATAAGTAATTTCGTTAA+GGG - chr2_3:10562143-10562162 None:intergenic 15.0%
!! AAAAATAAGTAATTTCGTTA+AGG - chr2_3:10562144-10562163 None:intergenic 15.0%
!! AAAGATAAATAACATAAAAC+AGG - chr2_3:10562218-10562237 None:intergenic 15.0%
!!! ATTTTTTTTTCCTTCTAAAA+TGG - chr2_3:10562910-10562929 None:intergenic 15.0%
!!! TATTTGAAATTTGAATGTAT+AGG + chr2_3:10563185-10563204 Msa0277780:intron 15.0%
!!! ATTTGAAATTTGAATGTATA+GGG + chr2_3:10563186-10563205 Msa0277780:intron 15.0%
!! CCTAAAATTGCATTATTATT+GGG - chr2_3:10559176-10559195 None:intergenic 20.0%
!! TCCTAAAATTGCATTATTAT+TGG - chr2_3:10559177-10559196 None:intergenic 20.0%
!!! CTCTTATCTTTTTTCATAAT+TGG + chr2_3:10559394-10559413 Msa0277780:intron 20.0%
!!! TTTTTTGCTTGTTTTTGTAA+TGG + chr2_3:10559467-10559486 Msa0277780:intron 20.0%
!! AAGATTTATCATATACTTGT+AGG - chr2_3:10559926-10559945 None:intergenic 20.0%
!!! ATTTTCATGAAAACCTAAAA+GGG - chr2_3:10560105-10560124 None:intergenic 20.0%
!! TGTATACATAAGATAAATCA+GGG - chr2_3:10560140-10560159 None:intergenic 20.0%
!! ATGTATACATAAGATAAATC+AGG - chr2_3:10560141-10560160 None:intergenic 20.0%
!! ATTTGTATGTTTCAATGAAA+TGG - chr2_3:10560171-10560190 None:intergenic 20.0%
!!! ATAAAGATGCATTTTAACTA+TGG + chr2_3:10560518-10560537 Msa0277780:intron 20.0%
!!! GATATTATTTTTGTTGTTGT+AGG + chr2_3:10560891-10560910 Msa0277780:intron 20.0%
!! CTACATCATAGAATAATTAA+AGG - chr2_3:10560930-10560949 None:intergenic 20.0%
!! CTTTAATTATTCTATGATGT+AGG + chr2_3:10560928-10560947 Msa0277780:intron 20.0%
!! AACCTAAAAGAAAATTAACA+CGG - chr2_3:10561131-10561150 None:intergenic 20.0%
!!! AATAGTTTTTTCTTTTTGCT+TGG - chr2_3:10561340-10561359 None:intergenic 20.0%
!!! TTTTCTTTTAGATACATACT+TGG + chr2_3:10561416-10561435 Msa0277780:intron 20.0%
!!! TTTTGTTGTTTTCCTTATTT+CGG + chr2_3:10561788-10561807 Msa0277780:intron 20.0%
!! ATATGAAAAATGAAGATGAA+AGG - chr2_3:10561957-10561976 None:intergenic 20.0%
!!! AGGTTAAACTACATTTTTAA+AGG - chr2_3:10562449-10562468 None:intergenic 20.0%
!! TGAATGAGAACAAAAAAATT+AGG - chr2_3:10562469-10562488 None:intergenic 20.0%
!!! TAATTTTTTTGTTCTCATTC+AGG + chr2_3:10562468-10562487 Msa0277780:intron 20.0%
!!! TTAACAGTTTAAAATTGTTG+CGG - chr2_3:10562960-10562979 None:intergenic 20.0%
!! GATATTCTTAAAAAAATGTG+TGG - chr2_3:10563104-10563123 None:intergenic 20.0%
!!! TTCTTAATAACTTTTCTTTC+TGG + chr2_3:10563514-10563533 Msa0277780:three_prime_UTR 20.0%
!! AAGTTTAACCAATCATATTA+AGG - chr2_3:10563679-10563698 None:intergenic 20.0%
!! CCTAAAATTGCATTATTATT+GGG - chr2_3:10559176-10559195 None:intergenic 20.0%
!! TCCTAAAATTGCATTATTAT+TGG - chr2_3:10559177-10559196 None:intergenic 20.0%
!!! CTCTTATCTTTTTTCATAAT+TGG + chr2_3:10559394-10559413 Msa0277780:intron 20.0%
!!! TTTTTTGCTTGTTTTTGTAA+TGG + chr2_3:10559467-10559486 Msa0277780:intron 20.0%
!! AAGATTTATCATATACTTGT+AGG - chr2_3:10559926-10559945 None:intergenic 20.0%
!!! ATTTTCATGAAAACCTAAAA+GGG - chr2_3:10560105-10560124 None:intergenic 20.0%
!! TGTATACATAAGATAAATCA+GGG - chr2_3:10560140-10560159 None:intergenic 20.0%
!! ATGTATACATAAGATAAATC+AGG - chr2_3:10560141-10560160 None:intergenic 20.0%
!! ATTTGTATGTTTCAATGAAA+TGG - chr2_3:10560171-10560190 None:intergenic 20.0%
!!! ATAAAGATGCATTTTAACTA+TGG + chr2_3:10560518-10560537 Msa0277780:intron 20.0%
!!! GATATTATTTTTGTTGTTGT+AGG + chr2_3:10560891-10560910 Msa0277780:intron 20.0%
!! CTACATCATAGAATAATTAA+AGG - chr2_3:10560930-10560949 None:intergenic 20.0%
!! CTTTAATTATTCTATGATGT+AGG + chr2_3:10560928-10560947 Msa0277780:intron 20.0%
!! AACCTAAAAGAAAATTAACA+CGG - chr2_3:10561131-10561150 None:intergenic 20.0%
!!! AATAGTTTTTTCTTTTTGCT+TGG - chr2_3:10561340-10561359 None:intergenic 20.0%
!!! TTTTCTTTTAGATACATACT+TGG + chr2_3:10561416-10561435 Msa0277780:intron 20.0%
!!! TTTTGTTGTTTTCCTTATTT+CGG + chr2_3:10561788-10561807 Msa0277780:intron 20.0%
!! ATATGAAAAATGAAGATGAA+AGG - chr2_3:10561957-10561976 None:intergenic 20.0%
!!! AGGTTAAACTACATTTTTAA+AGG - chr2_3:10562449-10562468 None:intergenic 20.0%
!! TGAATGAGAACAAAAAAATT+AGG - chr2_3:10562469-10562488 None:intergenic 20.0%
!!! TAATTTTTTTGTTCTCATTC+AGG + chr2_3:10562468-10562487 Msa0277780:intron 20.0%
!!! TTAACAGTTTAAAATTGTTG+CGG - chr2_3:10562960-10562979 None:intergenic 20.0%
!! GATATTCTTAAAAAAATGTG+TGG - chr2_3:10563104-10563123 None:intergenic 20.0%
!!! TTCTTAATAACTTTTCTTTC+TGG + chr2_3:10563514-10563533 Msa0277780:three_prime_UTR 20.0%
!! AAGTTTAACCAATCATATTA+AGG - chr2_3:10563679-10563698 None:intergenic 20.0%
! ATTATTGGGAGAATAAATAG+AGG - chr2_3:10559162-10559181 None:intergenic 25.0%
!! CCCAATAATAATGCAATTTT+AGG + chr2_3:10559173-10559192 Msa0277780:five_prime_UTR 25.0%
! AAAAAGATAAGAGAGATGAA+AGG - chr2_3:10559387-10559406 None:intergenic 25.0%
!! TTTTTGTAATGGCTATGTTT+TGG + chr2_3:10559478-10559497 Msa0277780:intron 25.0%
!! TTTTGTAATGGCTATGTTTT+GGG + chr2_3:10559479-10559498 Msa0277780:intron 25.0%
!! ATTTCTTCGAGATTAGTTAT+CGG + chr2_3:10559656-10559675 Msa0277780:intron 25.0%
! AAGGAAATTGAGGAATTTAA+TGG + chr2_3:10559810-10559829 Msa0277780:intron 25.0%
!!! GAATAGATTTTTGTTTGTTG+TGG + chr2_3:10560049-10560068 Msa0277780:intron 25.0%
!! GATTTTCATGAAAACCTAAA+AGG - chr2_3:10560106-10560125 None:intergenic 25.0%
!! TGTAGTTTTTGCCAAAATTA+TGG + chr2_3:10560380-10560399 Msa0277780:intron 25.0%
! ATTCATCAATACAGGATTAT+AGG - chr2_3:10560747-10560766 None:intergenic 25.0%
! AATTATTCTATGATGTAGGT+TGG + chr2_3:10560932-10560951 Msa0277780:intron 25.0%
! TCAAGAAGTTCAACATAATA+CGG - chr2_3:10561034-10561053 None:intergenic 25.0%
! ACTTCTTGATTTATTCAATG+AGG + chr2_3:10561045-10561064 Msa0277780:CDS 25.0%
! ATTTCAGTGTTTGAATTATG+TGG + chr2_3:10561076-10561095 Msa0277780:intron 25.0%
! ACTGTGAGTACATAAAAAAT+AGG + chr2_3:10561234-10561253 Msa0277780:intron 25.0%
! TGTCATATAAAACTGTTATC+TGG - chr2_3:10561366-10561385 None:intergenic 25.0%
!! GAATTTTACATTGTTCTTTC+AGG - chr2_3:10561522-10561541 None:intergenic 25.0%
! AGGAAGGTAAAAAGAATAAT+AGG - chr2_3:10561748-10561767 None:intergenic 25.0%
! AAGTATGATATAACACTTAC+AGG - chr2_3:10561768-10561787 None:intergenic 25.0%
! TAATTTCGTTAAGGGATTAA+AGG - chr2_3:10562135-10562154 None:intergenic 25.0%
! TTTGAAAAATCCTTTCACAA+TGG + chr2_3:10562183-10562202 Msa0277780:intron 25.0%
! AAGTCATTTCAGTTTAATCA+TGG - chr2_3:10562761-10562780 None:intergenic 25.0%
!! TAAACTGAAATGACTTTTTG+TGG + chr2_3:10562765-10562784 Msa0277780:intron 25.0%
!!! TAAATAACTGCCATTTTAGA+AGG + chr2_3:10562897-10562916 Msa0277780:intron 25.0%
! AAAATTGTTGCGGATAAAAT+TGG - chr2_3:10562950-10562969 None:intergenic 25.0%
! TGATAGTAAGATCAATGAAT+TGG - chr2_3:10562987-10563006 None:intergenic 25.0%
!!! TTTCTTACCATGTCTTTTTT+AGG + chr2_3:10563434-10563453 Msa0277780:three_prime_UTR 25.0%
!!! TTCTTACCATGTCTTTTTTA+GGG + chr2_3:10563435-10563454 Msa0277780:three_prime_UTR 25.0%
!!! ACTTTTCTTTCTGGAATATT+TGG + chr2_3:10563523-10563542 Msa0277780:three_prime_UTR 25.0%
!! ATTTTCTATGTTTCTTTCAC+AGG - chr2_3:10563596-10563615 None:intergenic 25.0%
! TGTGAAAGAAACATAGAAAA+TGG + chr2_3:10563595-10563614 Msa0277780:three_prime_UTR 25.0%
! AAAATGGATAGAGGAAATAA+AGG + chr2_3:10563611-10563630 Msa0277780:three_prime_UTR 25.0%
! AAATGGATAGAGGAAATAAA+GGG + chr2_3:10563612-10563631 Msa0277780:three_prime_UTR 25.0%
!!! GGTTAAACTTTTTTTTCACT+TGG + chr2_3:10563689-10563708 Msa0277780:three_prime_UTR 25.0%
!! TTGATCTGCTGTTTAATTAT+TGG + chr2_3:10563727-10563746 Msa0277780:three_prime_UTR 25.0%
!! TGATCTGCTGTTTAATTATT+GGG + chr2_3:10563728-10563747 Msa0277780:three_prime_UTR 25.0%
!! CATTTAAATGTTGTTGGTTA+TGG + chr2_3:10564124-10564143 Msa0277780:three_prime_UTR 25.0%
! ATTATTGGGAGAATAAATAG+AGG - chr2_3:10559162-10559181 None:intergenic 25.0%
!! CCCAATAATAATGCAATTTT+AGG + chr2_3:10559173-10559192 Msa0277780:five_prime_UTR 25.0%
! AAAAAGATAAGAGAGATGAA+AGG - chr2_3:10559387-10559406 None:intergenic 25.0%
!! TTTTTGTAATGGCTATGTTT+TGG + chr2_3:10559478-10559497 Msa0277780:intron 25.0%
!! TTTTGTAATGGCTATGTTTT+GGG + chr2_3:10559479-10559498 Msa0277780:intron 25.0%
!! ATTTCTTCGAGATTAGTTAT+CGG + chr2_3:10559656-10559675 Msa0277780:intron 25.0%
! AAGGAAATTGAGGAATTTAA+TGG + chr2_3:10559810-10559829 Msa0277780:intron 25.0%
!!! GAATAGATTTTTGTTTGTTG+TGG + chr2_3:10560049-10560068 Msa0277780:intron 25.0%
!! GATTTTCATGAAAACCTAAA+AGG - chr2_3:10560106-10560125 None:intergenic 25.0%
!! TGTAGTTTTTGCCAAAATTA+TGG + chr2_3:10560380-10560399 Msa0277780:intron 25.0%
! ATTCATCAATACAGGATTAT+AGG - chr2_3:10560747-10560766 None:intergenic 25.0%
! AATTATTCTATGATGTAGGT+TGG + chr2_3:10560932-10560951 Msa0277780:intron 25.0%
! TCAAGAAGTTCAACATAATA+CGG - chr2_3:10561034-10561053 None:intergenic 25.0%
! ACTTCTTGATTTATTCAATG+AGG + chr2_3:10561045-10561064 Msa0277780:CDS 25.0%
! ATTTCAGTGTTTGAATTATG+TGG + chr2_3:10561076-10561095 Msa0277780:intron 25.0%
! ACTGTGAGTACATAAAAAAT+AGG + chr2_3:10561234-10561253 Msa0277780:intron 25.0%
! TGTCATATAAAACTGTTATC+TGG - chr2_3:10561366-10561385 None:intergenic 25.0%
!! GAATTTTACATTGTTCTTTC+AGG - chr2_3:10561522-10561541 None:intergenic 25.0%
! AGGAAGGTAAAAAGAATAAT+AGG - chr2_3:10561748-10561767 None:intergenic 25.0%
! AAGTATGATATAACACTTAC+AGG - chr2_3:10561768-10561787 None:intergenic 25.0%
! TAATTTCGTTAAGGGATTAA+AGG - chr2_3:10562135-10562154 None:intergenic 25.0%
! TTTGAAAAATCCTTTCACAA+TGG + chr2_3:10562183-10562202 Msa0277780:intron 25.0%
! AAGTCATTTCAGTTTAATCA+TGG - chr2_3:10562761-10562780 None:intergenic 25.0%
!! TAAACTGAAATGACTTTTTG+TGG + chr2_3:10562765-10562784 Msa0277780:intron 25.0%
!!! TAAATAACTGCCATTTTAGA+AGG + chr2_3:10562897-10562916 Msa0277780:intron 25.0%
! AAAATTGTTGCGGATAAAAT+TGG - chr2_3:10562950-10562969 None:intergenic 25.0%
! TGATAGTAAGATCAATGAAT+TGG - chr2_3:10562987-10563006 None:intergenic 25.0%
!!! TTTCTTACCATGTCTTTTTT+AGG + chr2_3:10563434-10563453 Msa0277780:three_prime_UTR 25.0%
!!! TTCTTACCATGTCTTTTTTA+GGG + chr2_3:10563435-10563454 Msa0277780:three_prime_UTR 25.0%
!!! ACTTTTCTTTCTGGAATATT+TGG + chr2_3:10563523-10563542 Msa0277780:three_prime_UTR 25.0%
!! ATTTTCTATGTTTCTTTCAC+AGG - chr2_3:10563596-10563615 None:intergenic 25.0%
! TGTGAAAGAAACATAGAAAA+TGG + chr2_3:10563595-10563614 Msa0277780:three_prime_UTR 25.0%
! AAAATGGATAGAGGAAATAA+AGG + chr2_3:10563611-10563630 Msa0277780:three_prime_UTR 25.0%
! AAATGGATAGAGGAAATAAA+GGG + chr2_3:10563612-10563631 Msa0277780:three_prime_UTR 25.0%
!!! GGTTAAACTTTTTTTTCACT+TGG + chr2_3:10563689-10563708 Msa0277780:three_prime_UTR 25.0%
!! TTGATCTGCTGTTTAATTAT+TGG + chr2_3:10563727-10563746 Msa0277780:three_prime_UTR 25.0%
!! TGATCTGCTGTTTAATTATT+GGG + chr2_3:10563728-10563747 Msa0277780:three_prime_UTR 25.0%
!! CATTTAAATGTTGTTGGTTA+TGG + chr2_3:10564124-10564143 Msa0277780:three_prime_UTR 25.0%
AAATGAGAGAGAAAGAAAGA+GGG - chr2_3:10559239-10559258 None:intergenic 30.0%
CACTCAAAAAAACATCACAT+TGG - chr2_3:10559576-10559595 None:intergenic 30.0%
!!! CAATGTGATGTTTTTTTGAG+TGG + chr2_3:10559574-10559593 Msa0277780:intron 30.0%
! AGATTAGTTATCGGTAAAGT+TGG + chr2_3:10559665-10559684 Msa0277780:intron 30.0%
TTGTGATGCTATATAGTTAG+AGG + chr2_3:10559770-10559789 Msa0277780:intron 30.0%
ATATTCAAGGAAGGAAATTG+AGG + chr2_3:10559800-10559819 Msa0277780:intron 30.0%
GAACATATTGCAAGTACAAA+GGG - chr2_3:10560026-10560045 None:intergenic 30.0%
TGAACATATTGCAAGTACAA+AGG - chr2_3:10560027-10560046 None:intergenic 30.0%
!! TGTACTTTTTATGCCCTTTT+AGG + chr2_3:10560089-10560108 Msa0277780:intron 30.0%
TCTGCAATAAATTATAGCAC+AGG - chr2_3:10560220-10560239 None:intergenic 30.0%
CTATAATTTATTGCAGATGC+TGG + chr2_3:10560223-10560242 Msa0277780:intron 30.0%
AACAAAATCATAATGTCACC+AGG - chr2_3:10560348-10560367 None:intergenic 30.0%
! GTTTTTGCCAAAATTATGGT+CGG + chr2_3:10560384-10560403 Msa0277780:intron 30.0%
!!! TTTTTTTTCCTCCAAACCTT+GGG - chr2_3:10560858-10560877 None:intergenic 30.0%
TTTGGAGGAAAAAAAACATG+TGG + chr2_3:10560862-10560881 Msa0277780:intron 30.0%
! GACCGTGTTAATTTTCTTTT+AGG + chr2_3:10561126-10561145 Msa0277780:intron 30.0%
TTTATGTACTCACAGTGATA+AGG - chr2_3:10561230-10561249 None:intergenic 30.0%
! CCAACATTTTACGTTTATCT+AGG - chr2_3:10561291-10561310 None:intergenic 30.0%
CCTAGATAAACGTAAAATGT+TGG + chr2_3:10561288-10561307 Msa0277780:intron 30.0%
TACATACTTGGCAATCTTTA+TGG + chr2_3:10561428-10561447 Msa0277780:intron 30.0%
TGTAAGATAGCAGAATAACA+AGG - chr2_3:10561470-10561489 None:intergenic 30.0%
! AATGCGTATGAGTTGAAATT+CGG + chr2_3:10561554-10561573 Msa0277780:intron 30.0%
ATGATATAACACTTACAGGA+AGG - chr2_3:10561764-10561783 None:intergenic 30.0%
!! TCTTTTAAGTGAAGACTCAT+TGG - chr2_3:10562001-10562020 None:intergenic 30.0%
GTTATATGTTCCATTGTGAA+AGG - chr2_3:10562196-10562215 None:intergenic 30.0%
! TATGTATCTCCTATTTTCAC+AGG + chr2_3:10562241-10562260 Msa0277780:intron 30.0%
GAATGTTCTTTACATCAACA+TGG - chr2_3:10562307-10562326 None:intergenic 30.0%
AAAGAACATTCTTGTTGAGA+TGG + chr2_3:10562316-10562335 Msa0277780:CDS 30.0%
AAGAACATTCTTGTTGAGAT+GGG + chr2_3:10562317-10562336 Msa0277780:CDS 30.0%
TCTCATTCAGGATGATTATT+TGG + chr2_3:10562480-10562499 Msa0277780:intron 30.0%
GATGATTATTTGGATTGCTT+TGG + chr2_3:10562490-10562509 Msa0277780:CDS 30.0%
AGTTCTTTATGAAACCAGAT+AGG + chr2_3:10562596-10562615 Msa0277780:intron 30.0%
TTGCAATGAAGAACAAAAGA+AGG + chr2_3:10562673-10562692 Msa0277780:CDS 30.0%
GAGATTAAGCTCGTTATAAA+GGG - chr2_3:10562844-10562863 None:intergenic 30.0%
AAATGGCAGTTATTTAGAAG+TGG - chr2_3:10562893-10562912 None:intergenic 30.0%
ACTATCATAGTTGTCAAATG+CGG + chr2_3:10563000-10563019 Msa0277780:intron 30.0%
!!! TTTTTTGAGAAGGCAAATGT+AGG + chr2_3:10563055-10563074 Msa0277780:intron 30.0%
!! CTTGTAAATTTTAGCCAAGA+AGG - chr2_3:10563304-10563323 None:intergenic 30.0%
TCTTGGCTAAAATTTACAAG+AGG + chr2_3:10563304-10563323 Msa0277780:CDS 30.0%
ATTGCATCTTCAAACAATGT+TGG - chr2_3:10563360-10563379 None:intergenic 30.0%
ACATTGTTTGAAGATGCAAT+AGG + chr2_3:10563360-10563379 Msa0277780:three_prime_UTR 30.0%
!!! TCTTACCATGTCTTTTTTAG+GGG + chr2_3:10563436-10563455 Msa0277780:three_prime_UTR 30.0%
GAAACATAGAAAATGGATAG+AGG + chr2_3:10563602-10563621 Msa0277780:three_prime_UTR 30.0%
TTATAGTAGCAAACTTCCAA+TGG + chr2_3:10563647-10563666 Msa0277780:three_prime_UTR 30.0%
GATGAAGTAAATAGAGAAGA+AGG + chr2_3:10563912-10563931 Msa0277780:three_prime_UTR 30.0%
TCGGTACATTTAAATGTTGT+TGG + chr2_3:10564118-10564137 Msa0277780:three_prime_UTR 30.0%
! TTGGGAATTTTGTGAAAACA+AGG + chr2_3:10564167-10564186 Msa0277780:three_prime_UTR 30.0%
!!! GGTTGTAGACTATTTTAACA+CGG + chr2_3:10564312-10564331 Msa0277780:three_prime_UTR 30.0%
!!! GTTGTAGACTATTTTAACAC+GGG + chr2_3:10564313-10564332 Msa0277780:three_prime_UTR 30.0%
AAATGAGAGAGAAAGAAAGA+GGG - chr2_3:10559239-10559258 None:intergenic 30.0%
CACTCAAAAAAACATCACAT+TGG - chr2_3:10559576-10559595 None:intergenic 30.0%
!!! CAATGTGATGTTTTTTTGAG+TGG + chr2_3:10559574-10559593 Msa0277780:intron 30.0%
! AGATTAGTTATCGGTAAAGT+TGG + chr2_3:10559665-10559684 Msa0277780:intron 30.0%
TTGTGATGCTATATAGTTAG+AGG + chr2_3:10559770-10559789 Msa0277780:intron 30.0%
ATATTCAAGGAAGGAAATTG+AGG + chr2_3:10559800-10559819 Msa0277780:intron 30.0%
GAACATATTGCAAGTACAAA+GGG - chr2_3:10560026-10560045 None:intergenic 30.0%
TGAACATATTGCAAGTACAA+AGG - chr2_3:10560027-10560046 None:intergenic 30.0%
!! TGTACTTTTTATGCCCTTTT+AGG + chr2_3:10560089-10560108 Msa0277780:intron 30.0%
TCTGCAATAAATTATAGCAC+AGG - chr2_3:10560220-10560239 None:intergenic 30.0%
CTATAATTTATTGCAGATGC+TGG + chr2_3:10560223-10560242 Msa0277780:intron 30.0%
AACAAAATCATAATGTCACC+AGG - chr2_3:10560348-10560367 None:intergenic 30.0%
! GTTTTTGCCAAAATTATGGT+CGG + chr2_3:10560384-10560403 Msa0277780:intron 30.0%
!!! TTTTTTTTCCTCCAAACCTT+GGG - chr2_3:10560858-10560877 None:intergenic 30.0%
TTTGGAGGAAAAAAAACATG+TGG + chr2_3:10560862-10560881 Msa0277780:intron 30.0%
! GACCGTGTTAATTTTCTTTT+AGG + chr2_3:10561126-10561145 Msa0277780:intron 30.0%
TTTATGTACTCACAGTGATA+AGG - chr2_3:10561230-10561249 None:intergenic 30.0%
! CCAACATTTTACGTTTATCT+AGG - chr2_3:10561291-10561310 None:intergenic 30.0%
CCTAGATAAACGTAAAATGT+TGG + chr2_3:10561288-10561307 Msa0277780:intron 30.0%
TACATACTTGGCAATCTTTA+TGG + chr2_3:10561428-10561447 Msa0277780:intron 30.0%
TGTAAGATAGCAGAATAACA+AGG - chr2_3:10561470-10561489 None:intergenic 30.0%
! AATGCGTATGAGTTGAAATT+CGG + chr2_3:10561554-10561573 Msa0277780:intron 30.0%
ATGATATAACACTTACAGGA+AGG - chr2_3:10561764-10561783 None:intergenic 30.0%
!! TCTTTTAAGTGAAGACTCAT+TGG - chr2_3:10562001-10562020 None:intergenic 30.0%
GTTATATGTTCCATTGTGAA+AGG - chr2_3:10562196-10562215 None:intergenic 30.0%
! TATGTATCTCCTATTTTCAC+AGG + chr2_3:10562241-10562260 Msa0277780:intron 30.0%
GAATGTTCTTTACATCAACA+TGG - chr2_3:10562307-10562326 None:intergenic 30.0%
AAAGAACATTCTTGTTGAGA+TGG + chr2_3:10562316-10562335 Msa0277780:CDS 30.0%
AAGAACATTCTTGTTGAGAT+GGG + chr2_3:10562317-10562336 Msa0277780:CDS 30.0%
TCTCATTCAGGATGATTATT+TGG + chr2_3:10562480-10562499 Msa0277780:intron 30.0%
GATGATTATTTGGATTGCTT+TGG + chr2_3:10562490-10562509 Msa0277780:CDS 30.0%
AGTTCTTTATGAAACCAGAT+AGG + chr2_3:10562596-10562615 Msa0277780:intron 30.0%
TTGCAATGAAGAACAAAAGA+AGG + chr2_3:10562673-10562692 Msa0277780:CDS 30.0%
GAGATTAAGCTCGTTATAAA+GGG - chr2_3:10562844-10562863 None:intergenic 30.0%
AAATGGCAGTTATTTAGAAG+TGG - chr2_3:10562893-10562912 None:intergenic 30.0%
ACTATCATAGTTGTCAAATG+CGG + chr2_3:10563000-10563019 Msa0277780:intron 30.0%
!!! TTTTTTGAGAAGGCAAATGT+AGG + chr2_3:10563055-10563074 Msa0277780:intron 30.0%
!! CTTGTAAATTTTAGCCAAGA+AGG - chr2_3:10563304-10563323 None:intergenic 30.0%
TCTTGGCTAAAATTTACAAG+AGG + chr2_3:10563304-10563323 Msa0277780:CDS 30.0%
ATTGCATCTTCAAACAATGT+TGG - chr2_3:10563360-10563379 None:intergenic 30.0%
ACATTGTTTGAAGATGCAAT+AGG + chr2_3:10563360-10563379 Msa0277780:three_prime_UTR 30.0%
!!! TCTTACCATGTCTTTTTTAG+GGG + chr2_3:10563436-10563455 Msa0277780:three_prime_UTR 30.0%
GAAACATAGAAAATGGATAG+AGG + chr2_3:10563602-10563621 Msa0277780:three_prime_UTR 30.0%
TTATAGTAGCAAACTTCCAA+TGG + chr2_3:10563647-10563666 Msa0277780:three_prime_UTR 30.0%
GATGAAGTAAATAGAGAAGA+AGG + chr2_3:10563912-10563931 Msa0277780:three_prime_UTR 30.0%
TCGGTACATTTAAATGTTGT+TGG + chr2_3:10564118-10564137 Msa0277780:three_prime_UTR 30.0%
! TTGGGAATTTTGTGAAAACA+AGG + chr2_3:10564167-10564186 Msa0277780:three_prime_UTR 30.0%
!!! GGTTGTAGACTATTTTAACA+CGG + chr2_3:10564312-10564331 Msa0277780:three_prime_UTR 30.0%
!!! GTTGTAGACTATTTTAACAC+GGG + chr2_3:10564313-10564332 Msa0277780:three_prime_UTR 30.0%
TGGGAGAATAAATAGAGGAA+TGG - chr2_3:10559157-10559176 None:intergenic 35.0%
GAAATGAGAGAGAAAGAAAG+AGG - chr2_3:10559240-10559259 None:intergenic 35.0%
TTCTCTCTCATTTCCATCAA+TGG + chr2_3:10559246-10559265 Msa0277780:exon 35.0%
AGAGTAGACATTCAAGAATG+TGG - chr2_3:10559284-10559303 None:intergenic 35.0%
AACTGCGAGTTAAGAGAAAA+TGG + chr2_3:10559597-10559616 Msa0277780:intron 35.0%
ACTGCGAGTTAAGAGAAAAT+GGG + chr2_3:10559598-10559617 Msa0277780:intron 35.0%
TAAGAGAAAATGGGATGCTA+AGG + chr2_3:10559607-10559626 Msa0277780:intron 35.0%
AAGAGAAAATGGGATGCTAA+GGG + chr2_3:10559608-10559627 Msa0277780:intron 35.0%
TTAGTTATCGGTAAAGTTGG+TGG + chr2_3:10559668-10559687 Msa0277780:intron 35.0%
AAAATCGATAACCACGTCAT+CGG - chr2_3:10559704-10559723 None:intergenic 35.0%
! TAGAGGTGTGTGTATATTCA+AGG + chr2_3:10559787-10559806 Msa0277780:intron 35.0%
GATCACAGCAAATTATGTCA+TGG - chr2_3:10559959-10559978 None:intergenic 35.0%
ATATTGCAAGTACAAAGGGA+TGG - chr2_3:10560022-10560041 None:intergenic 35.0%
AAAACTTAATTCCTACCTCC+AGG - chr2_3:10560260-10560279 None:intergenic 35.0%
CTGTGAATTTGACAAAATCC+TGG + chr2_3:10560327-10560346 Msa0277780:intron 35.0%
TAGTGACTTTGGCAAAATCA+CGG - chr2_3:10560413-10560432 None:intergenic 35.0%
! GTTTCGAATGATAGTGACTT+TGG - chr2_3:10560424-10560443 None:intergenic 35.0%
!!! AGATGCATTTTAACTATGGC+AGG + chr2_3:10560522-10560541 Msa0277780:intron 35.0%
!!! GATGCATTTTAACTATGGCA+GGG + chr2_3:10560523-10560542 Msa0277780:intron 35.0%
! AGCTACCGATTGTTAAAAGA+AGG + chr2_3:10560576-10560595 Msa0277780:CDS 35.0%
! CCTGTCCTTCTTTTAACAAT+CGG - chr2_3:10560584-10560603 None:intergenic 35.0%
GCTGCAAAATTCATCAATAC+AGG - chr2_3:10560755-10560774 None:intergenic 35.0%
TCTTGTTCTTGACGACATTA+TGG + chr2_3:10560788-10560807 Msa0277780:CDS 35.0%
!!! GTTTTTTTTCCTCCAAACCT+TGG - chr2_3:10560859-10560878 None:intergenic 35.0%
TATCCTTAGGAAACACTTCA+AGG + chr2_3:10561003-10561022 Msa0277780:CDS 35.0%
ATCCTTAGGAAACACTTCAA+GGG + chr2_3:10561004-10561023 Msa0277780:CDS 35.0%
TCACAGTGATAAGGTGTATT+TGG - chr2_3:10561221-10561240 None:intergenic 35.0%
TTGTGTAGAACTTATGCTGA+TGG + chr2_3:10561264-10561283 Msa0277780:intron 35.0%
! TATCTCTCTTTTGACACTGA+TGG - chr2_3:10561390-10561409 None:intergenic 35.0%
AACGACAAGAAACCGAAATA+AGG - chr2_3:10561803-10561822 None:intergenic 35.0%
TAAAGGAGTTGAGGAGATAA+AGG - chr2_3:10562118-10562137 None:intergenic 35.0%
TTAAGGGATTAAAGGAGTTG+AGG - chr2_3:10562127-10562146 None:intergenic 35.0%
!!! GGGAACATATTTTCAAGTTC+AGG + chr2_3:10562337-10562356 Msa0277780:CDS 35.0%
!! ACAGAATTCTAGAGTGTGAA+TGG - chr2_3:10562384-10562403 None:intergenic 35.0%
! TTTGGTGATCCTGAAACAAT+TGG + chr2_3:10562508-10562527 Msa0277780:CDS 35.0%
TGATCCTGAAACAATTGGAA+AGG + chr2_3:10562513-10562532 Msa0277780:CDS 35.0%
TTGAAGACTTTAAGTGCTCT+TGG + chr2_3:10562627-10562646 Msa0277780:CDS 35.0%
TGAAGACTTTAAGTGCTCTT+GGG + chr2_3:10562628-10562647 Msa0277780:CDS 35.0%
CATGGCAGAAAAAAAAGAGA+AGG - chr2_3:10562743-10562762 None:intergenic 35.0%
! AATGACTTTTTGTGGTGAAC+AGG + chr2_3:10562773-10562792 Msa0277780:intron 35.0%
TTGACTATAGCAACATTTGC+AGG - chr2_3:10562819-10562838 None:intergenic 35.0%
CGAGATTAAGCTCGTTATAA+AGG - chr2_3:10562845-10562864 None:intergenic 35.0%
TTATAACGAGCTTAATCTCG+AGG + chr2_3:10562845-10562864 Msa0277780:CDS 35.0%
TGTTGGTATTTGTCCTACAA+GGG - chr2_3:10563343-10563362 None:intergenic 35.0%
ATGTTGGTATTTGTCCTACA+AGG - chr2_3:10563344-10563363 None:intergenic 35.0%
!!! CTTACCATGTCTTTTTTAGG+GGG + chr2_3:10563437-10563456 Msa0277780:three_prime_UTR 35.0%
CATATTAAGGCAACTACCAT+TGG - chr2_3:10563666-10563685 None:intergenic 35.0%
GGTAGTTGCCTTAATATGAT+TGG + chr2_3:10563668-10563687 Msa0277780:three_prime_UTR 35.0%
ATAATATAGCGAACAGTTGC+AGG + chr2_3:10563948-10563967 Msa0277780:three_prime_UTR 35.0%
CAAAATTCCCAACATCATCT+TGG - chr2_3:10564159-10564178 None:intergenic 35.0%
TTTGTCACAAGCTATTCAGT+GGG + chr2_3:10564240-10564259 Msa0277780:three_prime_UTR 35.0%
!! TCCAAATGTTGATTTCGAGT+TGG + chr2_3:10564279-10564298 Msa0277780:three_prime_UTR 35.0%
TCCAACTCGAAATCAACATT+TGG - chr2_3:10564283-10564302 None:intergenic 35.0%
AAAATAGTCTACAACCCTCT+TGG - chr2_3:10564308-10564327 None:intergenic 35.0%
TGGGAGAATAAATAGAGGAA+TGG - chr2_3:10559157-10559176 None:intergenic 35.0%
GAAATGAGAGAGAAAGAAAG+AGG - chr2_3:10559240-10559259 None:intergenic 35.0%
TTCTCTCTCATTTCCATCAA+TGG + chr2_3:10559246-10559265 Msa0277780:exon 35.0%
AGAGTAGACATTCAAGAATG+TGG - chr2_3:10559284-10559303 None:intergenic 35.0%
AACTGCGAGTTAAGAGAAAA+TGG + chr2_3:10559597-10559616 Msa0277780:intron 35.0%
ACTGCGAGTTAAGAGAAAAT+GGG + chr2_3:10559598-10559617 Msa0277780:intron 35.0%
TAAGAGAAAATGGGATGCTA+AGG + chr2_3:10559607-10559626 Msa0277780:intron 35.0%
AAGAGAAAATGGGATGCTAA+GGG + chr2_3:10559608-10559627 Msa0277780:intron 35.0%
TTAGTTATCGGTAAAGTTGG+TGG + chr2_3:10559668-10559687 Msa0277780:intron 35.0%
AAAATCGATAACCACGTCAT+CGG - chr2_3:10559704-10559723 None:intergenic 35.0%
! TAGAGGTGTGTGTATATTCA+AGG + chr2_3:10559787-10559806 Msa0277780:intron 35.0%
GATCACAGCAAATTATGTCA+TGG - chr2_3:10559959-10559978 None:intergenic 35.0%
ATATTGCAAGTACAAAGGGA+TGG - chr2_3:10560022-10560041 None:intergenic 35.0%
AAAACTTAATTCCTACCTCC+AGG - chr2_3:10560260-10560279 None:intergenic 35.0%
CTGTGAATTTGACAAAATCC+TGG + chr2_3:10560327-10560346 Msa0277780:intron 35.0%
TAGTGACTTTGGCAAAATCA+CGG - chr2_3:10560413-10560432 None:intergenic 35.0%
! GTTTCGAATGATAGTGACTT+TGG - chr2_3:10560424-10560443 None:intergenic 35.0%
!!! AGATGCATTTTAACTATGGC+AGG + chr2_3:10560522-10560541 Msa0277780:intron 35.0%
!!! GATGCATTTTAACTATGGCA+GGG + chr2_3:10560523-10560542 Msa0277780:intron 35.0%
! AGCTACCGATTGTTAAAAGA+AGG + chr2_3:10560576-10560595 Msa0277780:CDS 35.0%
! CCTGTCCTTCTTTTAACAAT+CGG - chr2_3:10560584-10560603 None:intergenic 35.0%
GCTGCAAAATTCATCAATAC+AGG - chr2_3:10560755-10560774 None:intergenic 35.0%
TCTTGTTCTTGACGACATTA+TGG + chr2_3:10560788-10560807 Msa0277780:CDS 35.0%
!!! GTTTTTTTTCCTCCAAACCT+TGG - chr2_3:10560859-10560878 None:intergenic 35.0%
TATCCTTAGGAAACACTTCA+AGG + chr2_3:10561003-10561022 Msa0277780:CDS 35.0%
ATCCTTAGGAAACACTTCAA+GGG + chr2_3:10561004-10561023 Msa0277780:CDS 35.0%
TCACAGTGATAAGGTGTATT+TGG - chr2_3:10561221-10561240 None:intergenic 35.0%
TTGTGTAGAACTTATGCTGA+TGG + chr2_3:10561264-10561283 Msa0277780:intron 35.0%
! TATCTCTCTTTTGACACTGA+TGG - chr2_3:10561390-10561409 None:intergenic 35.0%
AACGACAAGAAACCGAAATA+AGG - chr2_3:10561803-10561822 None:intergenic 35.0%
TAAAGGAGTTGAGGAGATAA+AGG - chr2_3:10562118-10562137 None:intergenic 35.0%
TTAAGGGATTAAAGGAGTTG+AGG - chr2_3:10562127-10562146 None:intergenic 35.0%
!!! GGGAACATATTTTCAAGTTC+AGG + chr2_3:10562337-10562356 Msa0277780:CDS 35.0%
!! ACAGAATTCTAGAGTGTGAA+TGG - chr2_3:10562384-10562403 None:intergenic 35.0%
! TTTGGTGATCCTGAAACAAT+TGG + chr2_3:10562508-10562527 Msa0277780:CDS 35.0%
TGATCCTGAAACAATTGGAA+AGG + chr2_3:10562513-10562532 Msa0277780:CDS 35.0%
TTGAAGACTTTAAGTGCTCT+TGG + chr2_3:10562627-10562646 Msa0277780:CDS 35.0%
TGAAGACTTTAAGTGCTCTT+GGG + chr2_3:10562628-10562647 Msa0277780:CDS 35.0%
CATGGCAGAAAAAAAAGAGA+AGG - chr2_3:10562743-10562762 None:intergenic 35.0%
! AATGACTTTTTGTGGTGAAC+AGG + chr2_3:10562773-10562792 Msa0277780:intron 35.0%
TTGACTATAGCAACATTTGC+AGG - chr2_3:10562819-10562838 None:intergenic 35.0%
CGAGATTAAGCTCGTTATAA+AGG - chr2_3:10562845-10562864 None:intergenic 35.0%
TTATAACGAGCTTAATCTCG+AGG + chr2_3:10562845-10562864 Msa0277780:CDS 35.0%
TGTTGGTATTTGTCCTACAA+GGG - chr2_3:10563343-10563362 None:intergenic 35.0%
ATGTTGGTATTTGTCCTACA+AGG - chr2_3:10563344-10563363 None:intergenic 35.0%
!!! CTTACCATGTCTTTTTTAGG+GGG + chr2_3:10563437-10563456 Msa0277780:three_prime_UTR 35.0%
CATATTAAGGCAACTACCAT+TGG - chr2_3:10563666-10563685 None:intergenic 35.0%
GGTAGTTGCCTTAATATGAT+TGG + chr2_3:10563668-10563687 Msa0277780:three_prime_UTR 35.0%
ATAATATAGCGAACAGTTGC+AGG + chr2_3:10563948-10563967 Msa0277780:three_prime_UTR 35.0%
CAAAATTCCCAACATCATCT+TGG - chr2_3:10564159-10564178 None:intergenic 35.0%
TTTGTCACAAGCTATTCAGT+GGG + chr2_3:10564240-10564259 Msa0277780:three_prime_UTR 35.0%
!! TCCAAATGTTGATTTCGAGT+TGG + chr2_3:10564279-10564298 Msa0277780:three_prime_UTR 35.0%
TCCAACTCGAAATCAACATT+TGG - chr2_3:10564283-10564302 None:intergenic 35.0%
AAAATAGTCTACAACCCTCT+TGG - chr2_3:10564308-10564327 None:intergenic 35.0%
!! ATTCTCGTCAATGGGTTGAT+AGG + chr2_3:10559353-10559372 Msa0277780:CDS 40.0%
!! TTCTCGTCAATGGGTTGATA+GGG + chr2_3:10559354-10559373 Msa0277780:CDS 40.0%
ATTGACTGACCACCTTTAGT+GGG - chr2_3:10559638-10559657 None:intergenic 40.0%
AATTGACTGACCACCTTTAG+TGG - chr2_3:10559639-10559658 None:intergenic 40.0%
GGTGTGTGTATATTCAAGGA+AGG + chr2_3:10559791-10559810 Msa0277780:intron 40.0%
TTGTTGTGGAAACTTGCACA+TGG + chr2_3:10560063-10560082 Msa0277780:intron 40.0%
CCGATTGTTAAAAGAAGGAC+AGG + chr2_3:10560581-10560600 Msa0277780:CDS 40.0%
! ATTTTCCAAGCTAGTGCTCT+TGG + chr2_3:10560621-10560640 Msa0277780:CDS 40.0%
! TCTTGGTTGGTGCATTGAAT+GGG + chr2_3:10560638-10560657 Msa0277780:CDS 40.0%
ACCACAGGAAACTTGTGAAA+CGG - chr2_3:10560711-10560730 None:intergenic 40.0%
TTGGGTACTCTAAACCAACA+TGG - chr2_3:10560840-10560859 None:intergenic 40.0%
!! ATGTTGGTTTAGAGTACCCA+AGG + chr2_3:10560839-10560858 Msa0277780:CDS 40.0%
AAGTGTTTCCTAAGGATACG+CGG - chr2_3:10561001-10561020 None:intergenic 40.0%
! TTCCCTTGAAGTGTTTCCTA+AGG - chr2_3:10561009-10561028 None:intergenic 40.0%
GTGATAAGGTGTATTTGGAC+AGG - chr2_3:10561216-10561235 None:intergenic 40.0%
GCTAGCTAGAAGAGAACAAT+AGG - chr2_3:10561586-10561605 None:intergenic 40.0%
TAGCTATGAACATCTTCTGC+AGG + chr2_3:10561694-10561713 Msa0277780:intron 40.0%
TCTTGTACTGAACAATACGC+CGG - chr2_3:10561722-10561741 None:intergenic 40.0%
! TAGCATTTTTCTCCTTTGCC+AGG + chr2_3:10562078-10562097 Msa0277780:intron 40.0%
CACATGCAACCTGTGAAAAT+AGG - chr2_3:10562253-10562272 None:intergenic 40.0%
GGTTGCATGTGCATTACTAA+TGG + chr2_3:10562262-10562281 Msa0277780:intron 40.0%
CTCACCTTTCCAATTGTTTC+AGG - chr2_3:10562520-10562539 None:intergenic 40.0%
CTTCAATATCTGTGCCTATC+TGG - chr2_3:10562613-10562632 None:intergenic 40.0%
AAAGAGAAGGAAAGAAGCAG+CGG - chr2_3:10562730-10562749 None:intergenic 40.0%
ATAGCAACATTTGCAGGATC+TGG - chr2_3:10562813-10562832 None:intergenic 40.0%
GGCAGTTATTTAGAAGTGGA+GGG - chr2_3:10562889-10562908 None:intergenic 40.0%
TGGCAGTTATTTAGAAGTGG+AGG - chr2_3:10562890-10562909 None:intergenic 40.0%
! TGGAGATGATCTTTCGCTTT+TGG - chr2_3:10563084-10563103 None:intergenic 40.0%
GAATGTATAGGGTGCATTTG+CGG + chr2_3:10563197-10563216 Msa0277780:intron 40.0%
! AGCAGTATTGAAGTCCTTCT+TGG + chr2_3:10563287-10563306 Msa0277780:CDS 40.0%
CAGAAGTAGATTTCCCTTGT+AGG + chr2_3:10563327-10563346 Msa0277780:exon 40.0%
ATCACCCCCTAAAAAAGACA+TGG - chr2_3:10563444-10563463 None:intergenic 40.0%
TGTAAACTGTCTTGTGACAC+TGG + chr2_3:10563485-10563504 Msa0277780:three_prime_UTR 40.0%
TCAAGTTCAGAGATAGACCA+TGG + chr2_3:10563565-10563584 Msa0277780:three_prime_UTR 40.0%
TTCTTTCACAGGCAAAACCA+TGG - chr2_3:10563585-10563604 None:intergenic 40.0%
! TTTTCACTTGGCTTCGTGTA+TGG + chr2_3:10563701-10563720 Msa0277780:three_prime_UTR 40.0%
AGATTTACACAAGTGCAGCA+GGG + chr2_3:10564034-10564053 Msa0277780:three_prime_UTR 40.0%
ATGTGCATCCAAGATGATGT+TGG + chr2_3:10564148-10564167 Msa0277780:three_prime_UTR 40.0%
TGTGCATCCAAGATGATGTT+GGG + chr2_3:10564149-10564168 Msa0277780:three_prime_UTR 40.0%
TTGTGAAAACAAGGACGATG+TGG + chr2_3:10564176-10564195 Msa0277780:three_prime_UTR 40.0%
! TCGGATATAGGTGAAGCATT+GGG + chr2_3:10564217-10564236 Msa0277780:three_prime_UTR 40.0%
GTTTGTCACAAGCTATTCAG+TGG + chr2_3:10564239-10564258 Msa0277780:three_prime_UTR 40.0%
!! ATTCTCGTCAATGGGTTGAT+AGG + chr2_3:10559353-10559372 Msa0277780:CDS 40.0%
!! TTCTCGTCAATGGGTTGATA+GGG + chr2_3:10559354-10559373 Msa0277780:CDS 40.0%
ATTGACTGACCACCTTTAGT+GGG - chr2_3:10559638-10559657 None:intergenic 40.0%
AATTGACTGACCACCTTTAG+TGG - chr2_3:10559639-10559658 None:intergenic 40.0%
GGTGTGTGTATATTCAAGGA+AGG + chr2_3:10559791-10559810 Msa0277780:intron 40.0%
TTGTTGTGGAAACTTGCACA+TGG + chr2_3:10560063-10560082 Msa0277780:intron 40.0%
CCGATTGTTAAAAGAAGGAC+AGG + chr2_3:10560581-10560600 Msa0277780:CDS 40.0%
! ATTTTCCAAGCTAGTGCTCT+TGG + chr2_3:10560621-10560640 Msa0277780:CDS 40.0%
! TCTTGGTTGGTGCATTGAAT+GGG + chr2_3:10560638-10560657 Msa0277780:CDS 40.0%
ACCACAGGAAACTTGTGAAA+CGG - chr2_3:10560711-10560730 None:intergenic 40.0%
TTGGGTACTCTAAACCAACA+TGG - chr2_3:10560840-10560859 None:intergenic 40.0%
!! ATGTTGGTTTAGAGTACCCA+AGG + chr2_3:10560839-10560858 Msa0277780:CDS 40.0%
AAGTGTTTCCTAAGGATACG+CGG - chr2_3:10561001-10561020 None:intergenic 40.0%
! TTCCCTTGAAGTGTTTCCTA+AGG - chr2_3:10561009-10561028 None:intergenic 40.0%
GTGATAAGGTGTATTTGGAC+AGG - chr2_3:10561216-10561235 None:intergenic 40.0%
GCTAGCTAGAAGAGAACAAT+AGG - chr2_3:10561586-10561605 None:intergenic 40.0%
TAGCTATGAACATCTTCTGC+AGG + chr2_3:10561694-10561713 Msa0277780:intron 40.0%
TCTTGTACTGAACAATACGC+CGG - chr2_3:10561722-10561741 None:intergenic 40.0%
! TAGCATTTTTCTCCTTTGCC+AGG + chr2_3:10562078-10562097 Msa0277780:intron 40.0%
CACATGCAACCTGTGAAAAT+AGG - chr2_3:10562253-10562272 None:intergenic 40.0%
GGTTGCATGTGCATTACTAA+TGG + chr2_3:10562262-10562281 Msa0277780:intron 40.0%
CTCACCTTTCCAATTGTTTC+AGG - chr2_3:10562520-10562539 None:intergenic 40.0%
CTTCAATATCTGTGCCTATC+TGG - chr2_3:10562613-10562632 None:intergenic 40.0%
AAAGAGAAGGAAAGAAGCAG+CGG - chr2_3:10562730-10562749 None:intergenic 40.0%
ATAGCAACATTTGCAGGATC+TGG - chr2_3:10562813-10562832 None:intergenic 40.0%
GGCAGTTATTTAGAAGTGGA+GGG - chr2_3:10562889-10562908 None:intergenic 40.0%
TGGCAGTTATTTAGAAGTGG+AGG - chr2_3:10562890-10562909 None:intergenic 40.0%
! TGGAGATGATCTTTCGCTTT+TGG - chr2_3:10563084-10563103 None:intergenic 40.0%
GAATGTATAGGGTGCATTTG+CGG + chr2_3:10563197-10563216 Msa0277780:intron 40.0%
! AGCAGTATTGAAGTCCTTCT+TGG + chr2_3:10563287-10563306 Msa0277780:CDS 40.0%
CAGAAGTAGATTTCCCTTGT+AGG + chr2_3:10563327-10563346 Msa0277780:exon 40.0%
ATCACCCCCTAAAAAAGACA+TGG - chr2_3:10563444-10563463 None:intergenic 40.0%
TGTAAACTGTCTTGTGACAC+TGG + chr2_3:10563485-10563504 Msa0277780:three_prime_UTR 40.0%
TCAAGTTCAGAGATAGACCA+TGG + chr2_3:10563565-10563584 Msa0277780:three_prime_UTR 40.0%
TTCTTTCACAGGCAAAACCA+TGG - chr2_3:10563585-10563604 None:intergenic 40.0%
! TTTTCACTTGGCTTCGTGTA+TGG + chr2_3:10563701-10563720 Msa0277780:three_prime_UTR 40.0%
AGATTTACACAAGTGCAGCA+GGG + chr2_3:10564034-10564053 Msa0277780:three_prime_UTR 40.0%
ATGTGCATCCAAGATGATGT+TGG + chr2_3:10564148-10564167 Msa0277780:three_prime_UTR 40.0%
TGTGCATCCAAGATGATGTT+GGG + chr2_3:10564149-10564168 Msa0277780:three_prime_UTR 40.0%
TTGTGAAAACAAGGACGATG+TGG + chr2_3:10564176-10564195 Msa0277780:three_prime_UTR 40.0%
! TCGGATATAGGTGAAGCATT+GGG + chr2_3:10564217-10564236 Msa0277780:three_prime_UTR 40.0%
GTTTGTCACAAGCTATTCAG+TGG + chr2_3:10564239-10564258 Msa0277780:three_prime_UTR 40.0%
TGAGAGAGAAAGAAAGAGGG+TGG - chr2_3:10559236-10559255 None:intergenic 45.0%
GACTTGAGATCTGCCATTGA+TGG - chr2_3:10559262-10559281 None:intergenic 45.0%
GTCTGAGGATTCTCGTCAAT+GGG + chr2_3:10559345-10559364 Msa0277780:CDS 45.0%
AGAAAATGGGATGCTAAGGG+AGG + chr2_3:10559611-10559630 Msa0277780:intron 45.0%
TTGACTGACCACCTTTAGTG+GGG - chr2_3:10559637-10559656 None:intergenic 45.0%
!! GATATTTTGCACCGATGACG+TGG + chr2_3:10559690-10559709 Msa0277780:intron 45.0%
! ACGGTGTCCGACCATAATTT+TGG - chr2_3:10560394-10560413 None:intergenic 45.0%
TAACCATGCTCCCTTGGAAA+AGG + chr2_3:10560449-10560468 Msa0277780:intron 45.0%
! AATACCCCCTCCTTTTCCAA+GGG - chr2_3:10560462-10560481 None:intergenic 45.0%
! AAATACCCCCTCCTTTTCCA+AGG - chr2_3:10560463-10560482 None:intergenic 45.0%
TGTCGATAACTGACAGTCCA+CGG - chr2_3:10560557-10560576 None:intergenic 45.0%
! CTCTTGGTTGGTGCATTGAA+TGG + chr2_3:10560637-10560656 Msa0277780:CDS 45.0%
GTTGGTGCATTGAATGGGTA+TGG + chr2_3:10560643-10560662 Msa0277780:intron 45.0%
ACCGTTTCACAAGTTTCCTG+TGG + chr2_3:10560707-10560726 Msa0277780:intron 45.0%
GTTTCACAAGTTTCCTGTGG+TGG + chr2_3:10560710-10560729 Msa0277780:intron 45.0%
! GGTTTAGAGTACCCAAGGTT+TGG + chr2_3:10560844-10560863 Msa0277780:intron 45.0%
! TTAGAGTACCCAAGGTTTGG+AGG + chr2_3:10560847-10560866 Msa0277780:intron 45.0%
GGAATGATTGCTGCGAATGA+TGG + chr2_3:10560953-10560972 Msa0277780:CDS 45.0%
ACCATATTCCGCGTATCCTT+AGG + chr2_3:10560990-10561009 Msa0277780:CDS 45.0%
TCCTAAGGATACGCGGAATA+TGG - chr2_3:10560994-10561013 None:intergenic 45.0%
GTTGAGTTTCAAACTGCTGC+TGG + chr2_3:10561148-10561167 Msa0277780:CDS 45.0%
!! GATCGATTTGATCACCACAC+TGG + chr2_3:10561177-10561196 Msa0277780:CDS 45.0%
GATTTGATCACCACACTGGA+AGG + chr2_3:10561181-10561200 Msa0277780:CDS 45.0%
! GTCTTTTTCTCCTTCCAGTG+TGG - chr2_3:10561194-10561213 None:intergenic 45.0%
GTTGAGGAGATAAAGGTCGA+GGG - chr2_3:10562111-10562130 None:intergenic 45.0%
AGTTGAGGAGATAAAGGTCG+AGG - chr2_3:10562112-10562131 None:intergenic 45.0%
GCATGTGCATTACTAATGGC+TGG + chr2_3:10562266-10562285 Msa0277780:CDS 45.0%
ACTAATGGCTGGTGAAGATC+TGG + chr2_3:10562277-10562296 Msa0277780:CDS 45.0%
TACTGTCTGTCACTATCAGC+TGG + chr2_3:10562417-10562436 Msa0277780:intron 45.0%
AATTGGAAAGGTGAGTGCAC+TGG + chr2_3:10562525-10562544 Msa0277780:intron 45.0%
ACTGGATCATGCATGGATAC+TGG + chr2_3:10562543-10562562 Msa0277780:intron 45.0%
AGACTTTAAGTGCTCTTGGG+TGG + chr2_3:10562631-10562650 Msa0277780:CDS 45.0%
! TTGGGTGGTTGTGAAAGCAT+TGG + chr2_3:10562646-10562665 Msa0277780:CDS 45.0%
AAGAGAAGGAAAGAAGCAGC+GGG - chr2_3:10562729-10562748 None:intergenic 45.0%
TGTGGTGAACAGGAGAACTA+TGG + chr2_3:10562783-10562802 Msa0277780:intron 45.0%
GTGGTGAACAGGAGAACTAT+GGG + chr2_3:10562784-10562803 Msa0277780:intron 45.0%
!!! GCGTAGCGGATTTTTTGAGA+AGG + chr2_3:10563045-10563064 Msa0277780:intron 45.0%
AAGATGCAATAGGAGCTAGC+TGG + chr2_3:10563370-10563389 Msa0277780:three_prime_UTR 45.0%
AACAGTTGCAGGAACAGGAT+TGG + chr2_3:10563959-10563978 Msa0277780:three_prime_UTR 45.0%
CAGATTTACACAAGTGCAGC+AGG + chr2_3:10564033-10564052 Msa0277780:three_prime_UTR 45.0%
! CAACGTGGATGCGTCTTTTT+CGG + chr2_3:10564099-10564118 Msa0277780:three_prime_UTR 45.0%
ACCTATATCCGACACACACA+CGG - chr2_3:10564209-10564228 None:intergenic 45.0%
GTCGGATATAGGTGAAGCAT+TGG + chr2_3:10564216-10564235 Msa0277780:three_prime_UTR 45.0%
!! ATTTCGAGTTGGATGCCAAG+AGG + chr2_3:10564290-10564309 Msa0277780:three_prime_UTR 45.0%
!! TTTCGAGTTGGATGCCAAGA+GGG + chr2_3:10564291-10564310 Msa0277780:three_prime_UTR 45.0%
TGAGAGAGAAAGAAAGAGGG+TGG - chr2_3:10559236-10559255 None:intergenic 45.0%
GACTTGAGATCTGCCATTGA+TGG - chr2_3:10559262-10559281 None:intergenic 45.0%
GTCTGAGGATTCTCGTCAAT+GGG + chr2_3:10559345-10559364 Msa0277780:CDS 45.0%
AGAAAATGGGATGCTAAGGG+AGG + chr2_3:10559611-10559630 Msa0277780:intron 45.0%
TTGACTGACCACCTTTAGTG+GGG - chr2_3:10559637-10559656 None:intergenic 45.0%
!! GATATTTTGCACCGATGACG+TGG + chr2_3:10559690-10559709 Msa0277780:intron 45.0%
! ACGGTGTCCGACCATAATTT+TGG - chr2_3:10560394-10560413 None:intergenic 45.0%
TAACCATGCTCCCTTGGAAA+AGG + chr2_3:10560449-10560468 Msa0277780:intron 45.0%
! AATACCCCCTCCTTTTCCAA+GGG - chr2_3:10560462-10560481 None:intergenic 45.0%
! AAATACCCCCTCCTTTTCCA+AGG - chr2_3:10560463-10560482 None:intergenic 45.0%
TGTCGATAACTGACAGTCCA+CGG - chr2_3:10560557-10560576 None:intergenic 45.0%
! CTCTTGGTTGGTGCATTGAA+TGG + chr2_3:10560637-10560656 Msa0277780:CDS 45.0%
GTTGGTGCATTGAATGGGTA+TGG + chr2_3:10560643-10560662 Msa0277780:intron 45.0%
ACCGTTTCACAAGTTTCCTG+TGG + chr2_3:10560707-10560726 Msa0277780:intron 45.0%
GTTTCACAAGTTTCCTGTGG+TGG + chr2_3:10560710-10560729 Msa0277780:intron 45.0%
! GGTTTAGAGTACCCAAGGTT+TGG + chr2_3:10560844-10560863 Msa0277780:intron 45.0%
! TTAGAGTACCCAAGGTTTGG+AGG + chr2_3:10560847-10560866 Msa0277780:intron 45.0%
GGAATGATTGCTGCGAATGA+TGG + chr2_3:10560953-10560972 Msa0277780:CDS 45.0%
ACCATATTCCGCGTATCCTT+AGG + chr2_3:10560990-10561009 Msa0277780:CDS 45.0%
TCCTAAGGATACGCGGAATA+TGG - chr2_3:10560994-10561013 None:intergenic 45.0%
GTTGAGTTTCAAACTGCTGC+TGG + chr2_3:10561148-10561167 Msa0277780:CDS 45.0%
!! GATCGATTTGATCACCACAC+TGG + chr2_3:10561177-10561196 Msa0277780:CDS 45.0%
GATTTGATCACCACACTGGA+AGG + chr2_3:10561181-10561200 Msa0277780:CDS 45.0%
! GTCTTTTTCTCCTTCCAGTG+TGG - chr2_3:10561194-10561213 None:intergenic 45.0%
GTTGAGGAGATAAAGGTCGA+GGG - chr2_3:10562111-10562130 None:intergenic 45.0%
AGTTGAGGAGATAAAGGTCG+AGG - chr2_3:10562112-10562131 None:intergenic 45.0%
GCATGTGCATTACTAATGGC+TGG + chr2_3:10562266-10562285 Msa0277780:CDS 45.0%
ACTAATGGCTGGTGAAGATC+TGG + chr2_3:10562277-10562296 Msa0277780:CDS 45.0%
TACTGTCTGTCACTATCAGC+TGG + chr2_3:10562417-10562436 Msa0277780:intron 45.0%
AATTGGAAAGGTGAGTGCAC+TGG + chr2_3:10562525-10562544 Msa0277780:intron 45.0%
ACTGGATCATGCATGGATAC+TGG + chr2_3:10562543-10562562 Msa0277780:intron 45.0%
AGACTTTAAGTGCTCTTGGG+TGG + chr2_3:10562631-10562650 Msa0277780:CDS 45.0%
! TTGGGTGGTTGTGAAAGCAT+TGG + chr2_3:10562646-10562665 Msa0277780:CDS 45.0%
AAGAGAAGGAAAGAAGCAGC+GGG - chr2_3:10562729-10562748 None:intergenic 45.0%
TGTGGTGAACAGGAGAACTA+TGG + chr2_3:10562783-10562802 Msa0277780:intron 45.0%
GTGGTGAACAGGAGAACTAT+GGG + chr2_3:10562784-10562803 Msa0277780:intron 45.0%
!!! GCGTAGCGGATTTTTTGAGA+AGG + chr2_3:10563045-10563064 Msa0277780:intron 45.0%
AAGATGCAATAGGAGCTAGC+TGG + chr2_3:10563370-10563389 Msa0277780:three_prime_UTR 45.0%
AACAGTTGCAGGAACAGGAT+TGG + chr2_3:10563959-10563978 Msa0277780:three_prime_UTR 45.0%
CAGATTTACACAAGTGCAGC+AGG + chr2_3:10564033-10564052 Msa0277780:three_prime_UTR 45.0%
! CAACGTGGATGCGTCTTTTT+CGG + chr2_3:10564099-10564118 Msa0277780:three_prime_UTR 45.0%
ACCTATATCCGACACACACA+CGG - chr2_3:10564209-10564228 None:intergenic 45.0%
GTCGGATATAGGTGAAGCAT+TGG + chr2_3:10564216-10564235 Msa0277780:three_prime_UTR 45.0%
!! ATTTCGAGTTGGATGCCAAG+AGG + chr2_3:10564290-10564309 Msa0277780:three_prime_UTR 45.0%
!! TTTCGAGTTGGATGCCAAGA+GGG + chr2_3:10564291-10564310 Msa0277780:three_prime_UTR 45.0%
AAAGAGAGATGCTGCACAGC+CGG - chr2_3:10559129-10559148 None:intergenic 50.0%
GGTCTGAGGATTCTCGTCAA+TGG + chr2_3:10559344-10559363 Msa0277780:CDS 50.0%
ATGCTGGACTACAATGTGCC+TGG + chr2_3:10560239-10560258 Msa0277780:intron 50.0%
ACTACAATGTGCCTGGAGGT+AGG + chr2_3:10560246-10560265 Msa0277780:intron 50.0%
CATACGTAACCATGCTCCCT+TGG + chr2_3:10560443-10560462 Msa0277780:intron 50.0%
CATGCTCCCTTGGAAAAGGA+GGG + chr2_3:10560453-10560472 Msa0277780:intron 50.0%
ATGCTCCCTTGGAAAAGGAG+GGG + chr2_3:10560454-10560473 Msa0277780:intron 50.0%
TCCAAGCTAGTGCTCTTGGT+TGG + chr2_3:10560625-10560644 Msa0277780:CDS 50.0%
!! ACCAACCAAGAGCACTAGCT+TGG - chr2_3:10560629-10560648 None:intergenic 50.0%
GGATTGCTCAATTCCACCAC+AGG - chr2_3:10560726-10560745 None:intergenic 50.0%
TGAACATCTTCTGCAGGCAC+CGG + chr2_3:10561700-10561719 Msa0277780:intron 50.0%
GAGGGTTCAATTCCTGGCAA+AGG - chr2_3:10562093-10562112 None:intergenic 50.0%
AAGGTCGAGGGTTCAATTCC+TGG - chr2_3:10562099-10562118 None:intergenic 50.0%
TGAGTGCACTGGATCATGCA+TGG + chr2_3:10562536-10562555 Msa0277780:intron 50.0%
ACTGCTTGAACTGCACTGCT+GGG - chr2_3:10563273-10563292 None:intergenic 50.0%
TACTGCTTGAACTGCACTGC+TGG - chr2_3:10563274-10563293 None:intergenic 50.0%
! CTGGAGTCCTGTTTTCTGTG+TGG + chr2_3:10563389-10563408 Msa0277780:three_prime_UTR 50.0%
GTCAGCTCCACACAGAAAAC+AGG - chr2_3:10563399-10563418 None:intergenic 50.0%
TAGCGAACAGTTGCAGGAAC+AGG + chr2_3:10563954-10563973 Msa0277780:three_prime_UTR 50.0%
! TTTGGTGGCAAAAACCGAGC+AGG + chr2_3:10564062-10564081 Msa0277780:three_prime_UTR 50.0%
! TTGGTGGCAAAAACCGAGCA+GGG + chr2_3:10564063-10564082 Msa0277780:three_prime_UTR 50.0%
TACTTAAGCCTTCCCCTGCT+CGG - chr2_3:10564079-10564098 None:intergenic 50.0%
GGGAAGGCTTAAGTACAACG+TGG + chr2_3:10564084-10564103 Msa0277780:three_prime_UTR 50.0%
CTATATCCGACACACACACG+GGG - chr2_3:10564207-10564226 None:intergenic 50.0%
CCTATATCCGACACACACAC+GGG - chr2_3:10564208-10564227 None:intergenic 50.0%
AAAGAGAGATGCTGCACAGC+CGG - chr2_3:10559129-10559148 None:intergenic 50.0%
GGTCTGAGGATTCTCGTCAA+TGG + chr2_3:10559344-10559363 Msa0277780:CDS 50.0%
ATGCTGGACTACAATGTGCC+TGG + chr2_3:10560239-10560258 Msa0277780:intron 50.0%
ACTACAATGTGCCTGGAGGT+AGG + chr2_3:10560246-10560265 Msa0277780:intron 50.0%
CATACGTAACCATGCTCCCT+TGG + chr2_3:10560443-10560462 Msa0277780:intron 50.0%
CATGCTCCCTTGGAAAAGGA+GGG + chr2_3:10560453-10560472 Msa0277780:intron 50.0%
ATGCTCCCTTGGAAAAGGAG+GGG + chr2_3:10560454-10560473 Msa0277780:intron 50.0%
TCCAAGCTAGTGCTCTTGGT+TGG + chr2_3:10560625-10560644 Msa0277780:CDS 50.0%
!! ACCAACCAAGAGCACTAGCT+TGG - chr2_3:10560629-10560648 None:intergenic 50.0%
GGATTGCTCAATTCCACCAC+AGG - chr2_3:10560726-10560745 None:intergenic 50.0%
TGAACATCTTCTGCAGGCAC+CGG + chr2_3:10561700-10561719 Msa0277780:intron 50.0%
GAGGGTTCAATTCCTGGCAA+AGG - chr2_3:10562093-10562112 None:intergenic 50.0%
AAGGTCGAGGGTTCAATTCC+TGG - chr2_3:10562099-10562118 None:intergenic 50.0%
TGAGTGCACTGGATCATGCA+TGG + chr2_3:10562536-10562555 Msa0277780:intron 50.0%
ACTGCTTGAACTGCACTGCT+GGG - chr2_3:10563273-10563292 None:intergenic 50.0%
TACTGCTTGAACTGCACTGC+TGG - chr2_3:10563274-10563293 None:intergenic 50.0%
! CTGGAGTCCTGTTTTCTGTG+TGG + chr2_3:10563389-10563408 Msa0277780:three_prime_UTR 50.0%
GTCAGCTCCACACAGAAAAC+AGG - chr2_3:10563399-10563418 None:intergenic 50.0%
TAGCGAACAGTTGCAGGAAC+AGG + chr2_3:10563954-10563973 Msa0277780:three_prime_UTR 50.0%
! TTTGGTGGCAAAAACCGAGC+AGG + chr2_3:10564062-10564081 Msa0277780:three_prime_UTR 50.0%
! TTGGTGGCAAAAACCGAGCA+GGG + chr2_3:10564063-10564082 Msa0277780:three_prime_UTR 50.0%
TACTTAAGCCTTCCCCTGCT+CGG - chr2_3:10564079-10564098 None:intergenic 50.0%
GGGAAGGCTTAAGTACAACG+TGG + chr2_3:10564084-10564103 Msa0277780:three_prime_UTR 50.0%
CTATATCCGACACACACACG+GGG - chr2_3:10564207-10564226 None:intergenic 50.0%
CCTATATCCGACACACACAC+GGG - chr2_3:10564208-10564227 None:intergenic 50.0%
AGCAGGGTCATGGAGAAGCT+CGG - chr2_3:10559317-10559336 None:intergenic 55.0%
TCCATGACCCTGCTTTCGAG+TGG + chr2_3:10559323-10559342 Msa0277780:CDS 55.0%
ACCACTCGAAAGCAGGGTCA+TGG - chr2_3:10559327-10559346 None:intergenic 55.0%
CCTCAGACCACTCGAAAGCA+GGG - chr2_3:10559333-10559352 None:intergenic 55.0%
TCCTCAGACCACTCGAAAGC+AGG - chr2_3:10559334-10559353 None:intergenic 55.0%
CTGGACTACAATGTGCCTGG+AGG + chr2_3:10560242-10560261 Msa0277780:intron 55.0%
! CCTCCTTTTCCAAGGGAGCA+TGG - chr2_3:10560455-10560474 None:intergenic 55.0%
CCATGCTCCCTTGGAAAAGG+AGG + chr2_3:10560452-10560471 Msa0277780:intron 55.0%
TGCTCCCTTGGAAAAGGAGG+GGG + chr2_3:10560455-10560474 Msa0277780:intron 55.0%
GACAACTCCCATACACGTCG+TGG + chr2_3:10560810-10560829 Msa0277780:CDS 55.0%
TGGCTGACCACGACGTGTAT+GGG - chr2_3:10560820-10560839 None:intergenic 55.0%
ATGGCTGACCACGACGTGTA+TGG - chr2_3:10560821-10560840 None:intergenic 55.0%
GCTGGGATGAGCTTCAATCG+AGG - chr2_3:10563256-10563275 None:intergenic 55.0%
! GTTGCAGGAACAGGATTGGC+AGG + chr2_3:10563963-10563982 Msa0277780:three_prime_UTR 55.0%
TACACAAGTGCAGCAGGGTC+AGG + chr2_3:10564039-10564058 Msa0277780:three_prime_UTR 55.0%
AAGTGCAGCAGGGTCAGGTT+TGG + chr2_3:10564044-10564063 Msa0277780:three_prime_UTR 55.0%
TGGTGGCAAAAACCGAGCAG+GGG + chr2_3:10564064-10564083 Msa0277780:three_prime_UTR 55.0%
CCCGTGTGTGTGTCGGATAT+AGG + chr2_3:10564205-10564224 Msa0277780:three_prime_UTR 55.0%
AGCAGGGTCATGGAGAAGCT+CGG - chr2_3:10559317-10559336 None:intergenic 55.0%
TCCATGACCCTGCTTTCGAG+TGG + chr2_3:10559323-10559342 Msa0277780:CDS 55.0%
ACCACTCGAAAGCAGGGTCA+TGG - chr2_3:10559327-10559346 None:intergenic 55.0%
CCTCAGACCACTCGAAAGCA+GGG - chr2_3:10559333-10559352 None:intergenic 55.0%
TCCTCAGACCACTCGAAAGC+AGG - chr2_3:10559334-10559353 None:intergenic 55.0%
CTGGACTACAATGTGCCTGG+AGG + chr2_3:10560242-10560261 Msa0277780:intron 55.0%
! CCTCCTTTTCCAAGGGAGCA+TGG - chr2_3:10560455-10560474 None:intergenic 55.0%
CCATGCTCCCTTGGAAAAGG+AGG + chr2_3:10560452-10560471 Msa0277780:intron 55.0%
TGCTCCCTTGGAAAAGGAGG+GGG + chr2_3:10560455-10560474 Msa0277780:intron 55.0%
GACAACTCCCATACACGTCG+TGG + chr2_3:10560810-10560829 Msa0277780:CDS 55.0%
TGGCTGACCACGACGTGTAT+GGG - chr2_3:10560820-10560839 None:intergenic 55.0%
ATGGCTGACCACGACGTGTA+TGG - chr2_3:10560821-10560840 None:intergenic 55.0%
GCTGGGATGAGCTTCAATCG+AGG - chr2_3:10563256-10563275 None:intergenic 55.0%
! GTTGCAGGAACAGGATTGGC+AGG + chr2_3:10563963-10563982 Msa0277780:three_prime_UTR 55.0%
TACACAAGTGCAGCAGGGTC+AGG + chr2_3:10564039-10564058 Msa0277780:three_prime_UTR 55.0%
AAGTGCAGCAGGGTCAGGTT+TGG + chr2_3:10564044-10564063 Msa0277780:three_prime_UTR 55.0%
TGGTGGCAAAAACCGAGCAG+GGG + chr2_3:10564064-10564083 Msa0277780:three_prime_UTR 55.0%
CCCGTGTGTGTGTCGGATAT+AGG + chr2_3:10564205-10564224 Msa0277780:three_prime_UTR 55.0%
! CCCTGCTTTCGAGTGGTCTG+AGG + chr2_3:10559330-10559349 Msa0277780:CDS 60.0%
GCTAAGGGAGGCCCCACTAA+AGG + chr2_3:10559623-10559642 Msa0277780:intron 60.0%
AAGGGAGGCCCCACTAAAGG+TGG + chr2_3:10559626-10559645 Msa0277780:intron 60.0%
ATGGCAGGGAAGCTGAACCG+TGG + chr2_3:10560537-10560556 Msa0277780:intron 60.0%
CACGTCGTGGTCAGCCATGT+TGG + chr2_3:10560823-10560842 Msa0277780:CDS 60.0%
TGCAGCAGGGTCAGGTTTGG+TGG + chr2_3:10564047-10564066 Msa0277780:three_prime_UTR 60.0%
GGCAAAAACCGAGCAGGGGA+AGG + chr2_3:10564068-10564087 Msa0277780:three_prime_UTR 60.0%
GTCAAGCCCCGTGTGTGTGT+CGG + chr2_3:10564198-10564217 Msa0277780:three_prime_UTR 60.0%
! CCCTGCTTTCGAGTGGTCTG+AGG + chr2_3:10559330-10559349 Msa0277780:CDS 60.0%
GCTAAGGGAGGCCCCACTAA+AGG + chr2_3:10559623-10559642 Msa0277780:intron 60.0%
AAGGGAGGCCCCACTAAAGG+TGG + chr2_3:10559626-10559645 Msa0277780:intron 60.0%
ATGGCAGGGAAGCTGAACCG+TGG + chr2_3:10560537-10560556 Msa0277780:intron 60.0%
CACGTCGTGGTCAGCCATGT+TGG + chr2_3:10560823-10560842 Msa0277780:CDS 60.0%
TGCAGCAGGGTCAGGTTTGG+TGG + chr2_3:10564047-10564066 Msa0277780:three_prime_UTR 60.0%
GGCAAAAACCGAGCAGGGGA+AGG + chr2_3:10564068-10564087 Msa0277780:three_prime_UTR 60.0%
GTCAAGCCCCGTGTGTGTGT+CGG + chr2_3:10564198-10564217 Msa0277780:three_prime_UTR 60.0%
CGGTGAGTGTGGTTGGCGTG+GGG - chr2_3:10559109-10559128 None:intergenic 65.0%
CCGGTGAGTGTGGTTGGCGT+GGG - chr2_3:10559110-10559129 None:intergenic 65.0%
CCCACGCCAACCACACTCAC+CGG + chr2_3:10559107-10559126 Msa0277780:five_prime_UTR 65.0%
GCACAGCCGGTGAGTGTGGT+TGG - chr2_3:10559116-10559135 None:intergenic 65.0%
TGCTGCACAGCCGGTGAGTG+TGG - chr2_3:10559120-10559139 None:intergenic 65.0%
CGGTGAGTGTGGTTGGCGTG+GGG - chr2_3:10559109-10559128 None:intergenic 65.0%
CCGGTGAGTGTGGTTGGCGT+GGG - chr2_3:10559110-10559129 None:intergenic 65.0%
CCCACGCCAACCACACTCAC+CGG + chr2_3:10559107-10559126 Msa0277780:five_prime_UTR 65.0%
GCACAGCCGGTGAGTGTGGT+TGG - chr2_3:10559116-10559135 None:intergenic 65.0%
TGCTGCACAGCCGGTGAGTG+TGG - chr2_3:10559120-10559139 None:intergenic 65.0%
GCCGGTGAGTGTGGTTGGCG+TGG - chr2_3:10559111-10559130 None:intergenic 70.0%
TCCGCTACGCGCCGCGATAG+CGG - chr2_3:10563035-10563054 None:intergenic 70.0%
GCCGGTGAGTGTGGTTGGCG+TGG - chr2_3:10559111-10559130 None:intergenic 70.0%
TCCGCTACGCGCCGCGATAG+CGG - chr2_3:10563035-10563054 None:intergenic 70.0%
!! CTACGCGCCGCGATAGCGGG+CGG - chr2_3:10563031-10563050 None:intergenic 75.0%
CCGCTACGCGCCGCGATAGC+GGG - chr2_3:10563034-10563053 None:intergenic 75.0%
CCCGCTATCGCGGCGCGTAG+CGG + chr2_3:10563031-10563050 Msa0277780:intron 75.0%
!! CTACGCGCCGCGATAGCGGG+CGG - chr2_3:10563031-10563050 None:intergenic 75.0%
CCGCTACGCGCCGCGATAGC+GGG - chr2_3:10563034-10563053 None:intergenic 75.0%
CCCGCTATCGCGGCGCGTAG+CGG + chr2_3:10563031-10563050 Msa0277780:intron 75.0%
! GGCTGCGCCGCCCGCTATCG+CGG + chr2_3:10563021-10563040 Msa0277780:intron 80.0%
! GGCTGCGCCGCCCGCTATCG+CGG + chr2_3:10563021-10563040 Msa0277780:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 10559074 10564343 10559074 ID=Msa0277780;Name=Msa0277780
chr2_3 mRNA 10559074 10564343 10559074 ID=Msa0277780-mRNA-1;Parent=Msa0277780;Name=Msa0277780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=191|0.81|0.91|0.91|1|1|12|1008|342
chr2_3 exon 10559074 10559375 10559074 ID=Msa0277780-mRNA-1:exon:4656;Parent=Msa0277780-mRNA-1
chr2_3 exon 10559905 10559929 10559905 ID=Msa0277780-mRNA-1:exon:4657;Parent=Msa0277780-mRNA-1
chr2_3 exon 10560544 10560659 10560544 ID=Msa0277780-mRNA-1:exon:4658;Parent=Msa0277780-mRNA-1
chr2_3 exon 10560774 10560860 10560774 ID=Msa0277780-mRNA-1:exon:4659;Parent=Msa0277780-mRNA-1
chr2_3 exon 10560950 10561066 10560950 ID=Msa0277780-mRNA-1:exon:4660;Parent=Msa0277780-mRNA-1
chr2_3 exon 10561148 10561236 10561148 ID=Msa0277780-mRNA-1:exon:4661;Parent=Msa0277780-mRNA-1
chr2_3 exon 10561716 10561767 10561716 ID=Msa0277780-mRNA-1:exon:4662;Parent=Msa0277780-mRNA-1
chr2_3 exon 10562263 10562358 10562263 ID=Msa0277780-mRNA-1:exon:4663;Parent=Msa0277780-mRNA-1
chr2_3 exon 10562490 10562534 10562490 ID=Msa0277780-mRNA-1:exon:4664;Parent=Msa0277780-mRNA-1
chr2_3 exon 10562614 10562703 10562614 ID=Msa0277780-mRNA-1:exon:4665;Parent=Msa0277780-mRNA-1
chr2_3 exon 10562795 10562866 10562795 ID=Msa0277780-mRNA-1:exon:4666;Parent=Msa0277780-mRNA-1
chr2_3 exon 10563207 10564343 10563207 ID=Msa0277780-mRNA-1:exon:4667;Parent=Msa0277780-mRNA-1
chr2_3 five_prime_UTR 10559074 10559264 10559074 ID=Msa0277780-mRNA-1:five_prime_utr;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10559265 10559375 10559265 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10559905 10559929 10559905 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10560544 10560659 10560544 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10560774 10560860 10560774 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10560950 10561066 10560950 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10561148 10561236 10561148 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10561716 10561767 10561716 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10562263 10562358 10562263 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10562490 10562534 10562490 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10562614 10562703 10562614 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10562795 10562866 10562795 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 CDS 10563207 10563335 10563207 ID=Msa0277780-mRNA-1:cds;Parent=Msa0277780-mRNA-1
chr2_3 three_prime_UTR 10563336 10564343 10563336 ID=Msa0277780-mRNA-1:three_prime_utr;Parent=Msa0277780-mRNA-1
Gene Sequence

>Msa0277780

ATGGCAGATCTCAAGTCCACATTCTTGAATGTCTACTCTGTTCTCAAATCCGAGCTTCTCCATGACCCTGCTTTCGAGTGGTCTGAGGATTCTCGTCAATGGGTTGATAGGTTTCAAGTTTATGATGATCCTACAAGGAAGCTGAACCGTGGACTGTCAGTTATCGACAGCTACCGATTGTTAAAAGAAGGACAGGCATTGAATGATGACGAAATTTTCCAAGCTAGTGCTCTTGGTTGGTGCATTGAATGGCTTCAAGCATATTTTCTTGTTCTTGACGACATTATGGACAACTCCCATACACGTCGTGGTCAGCCATGTTGGTTTAGAGTACCCAAGGTTGGAATGATTGCTGCGAATGATGGAGTTCTACTAAGAAACCATATTCCGCGTATCCTTAGGAAACACTTCAAGGGAAAGCCGTATTATGTTGAACTTCTTGATTTATTCAATGAGGTTGAGTTTCAAACTGCTGCTGGACAGATGATCGATTTGATCACCACACTGGAAGGAGAAAAAGACCTGTCCAAATACACCTTATCACTGCACCGGCGTATTGTTCAGTACAAGACTGCCTATTATTCTTTTTACCTTCCTGTTGCATGTGCATTACTAATGGCTGGTGAAGATCTGGATAACCATGTTGATGTAAAGAACATTCTTGTTGAGATGGGAACATATTTTCAAGTTCAGGATGATTATTTGGATTGCTTTGGTGATCCTGAAACAATTGGAAAGATAGGCACAGATATTGAAGACTTTAAGTGCTCTTGGGTGGTTGTGAAAGCATTGGAACTTTGCAATGAAGAACAAAAGAAGGTTTTACATGAGAACTATGGGAAGCCAGATCCTGCAAATGTTGCTATAGTCAAGACCCTTTATAACGAGCTTAATCTCGAGGGTGCATTTGCGGAGTATGAGAGTGCGAGCTATGAGAAGCTTGTAACCTCGATTGAAGCTCATCCCAGCAGTGCAGTTCAAGCAGTATTGAAGTCCTTCTTGGCTAAAATTTACAAGAGGCAGAAGTAG
Protein sequence

>Msa0277780

MADLKSTFLNVYSVLKSELLHDPAFEWSEDSRQWVDRFQVYDDPTRKLNRGLSVIDSYRLLKEGQALNDDEIFQASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGVLLRNHIPRILRKHFKGKPYYVELLDLFNEVEFQTAAGQMIDLITTLEGEKDLSKYTLSLHRRIVQYKTAYYSFYLPVACALLMAGEDLDNHVDVKNILVEMGTYFQVQDDYLDCFGDPETIGKIGTDIEDFKCSWVVVKALELCNEEQKKVLHENYGKPDPANVAIVKTLYNELNLEGAFAEYESASYEKLVTSIEAHPSSAVQAVLKSFLAKIYKRQK*