Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279480 | XP_003604338.1 | 86.034 | 179 | 24 | 1 | 347 | 524 | 1112 | 1290 | 2.43e-90 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279480 | sp|F4I171|MD15A_ARATH | 60.123 | 163 | 62 | 2 | 358 | 517 | 1171 | 1333 | 4.27e-52 | 194 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279480 | G7JFS6 | 86.034 | 179 | 24 | 1 | 347 | 524 | 1112 | 1290 | 1.16e-90 | 312 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0279480 | Msa0323870 | 0.807331 | 5.325108e-50 | -8.615850e-47 |
| Msa0279480 | Msa0537300 | 0.911085 | 9.061170e-83 | -8.615850e-47 |
| Msa0279480 | Msa0604210 | 0.800156 | 1.644977e-48 | -8.615850e-47 |
| Msa0279480 | Msa0966650 | 0.917469 | 5.111951e-86 | -8.615850e-47 |
| Msa0279480 | Msa1068790 | 0.918325 | 1.790078e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279480 | MtrunA17_Chr4g0002981 | 86.034 | 179 | 24 | 1 | 347 | 524 | 1112 | 1290 | 2.23e-94 | 312 |
| Msa0279480 | MtrunA17_Chr2g0333451 | 68.208 | 173 | 54 | 1 | 347 | 518 | 1117 | 1289 | 1.31e-61 | 219 |
| Msa0279480 | MtrunA17_Chr8g0354961 | 40.645 | 155 | 91 | 1 | 360 | 513 | 35 | 189 | 1.26e-29 | 115 |
| Msa0279480 | MtrunA17_Chr4g0049851 | 85.075 | 67 | 9 | 1 | 292 | 358 | 155 | 220 | 3.31e-28 | 116 |
| Msa0279480 | MtrunA17_Chr8g0354921 | 37.975 | 158 | 97 | 1 | 357 | 513 | 178 | 335 | 1.61e-26 | 110 |
| Msa0279480 | MtrunA17_Chr4g0049861 | 77.612 | 67 | 14 | 1 | 292 | 358 | 153 | 218 | 1.29e-24 | 106 |
| Msa0279480 | MtrunA17_Chr4g0038931 | 95.556 | 45 | 2 | 0 | 250 | 294 | 656 | 700 | 7.72e-18 | 87.4 |
| Msa0279480 | MtrunA17_Chr4g0045551 | 75.556 | 45 | 6 | 1 | 83 | 122 | 345 | 389 | 5.88e-15 | 77.4 |
| Msa0279480 | MtrunA17_Chr4g0052781 | 30.719 | 153 | 95 | 3 | 357 | 507 | 351 | 494 | 3.46e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0279480 | AT1G15780.1 | 60.123 | 163 | 62 | 2 | 358 | 517 | 1171 | 1333 | 4.34e-53 | 194 |
| Msa0279480 | AT1G15780.3 | 60.123 | 163 | 62 | 2 | 358 | 517 | 1193 | 1355 | 5.19e-53 | 194 |
| Msa0279480 | AT2G10440.2 | 43.671 | 158 | 75 | 3 | 358 | 513 | 694 | 839 | 4.44e-30 | 125 |
| Msa0279480 | AT2G10440.1 | 41.667 | 168 | 74 | 3 | 358 | 513 | 774 | 929 | 4.92e-30 | 125 |
| Msa0279480 | AT1G15780.2 | 57.732 | 97 | 38 | 2 | 358 | 451 | 1171 | 1267 | 7.81e-25 | 109 |
| Msa0279480 | AT5G64370.1 | 73.770 | 61 | 15 | 1 | 298 | 358 | 155 | 214 | 6.32e-15 | 77.4 |
Find 140 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCATTATGCAGGATTT+TGG | 0.132616 | 2_3:-13478306 | Msa0279480:intron |
| TGGAAACTTGTCTATGAATA+TGG | 0.187776 | 2_3:+13474846 | None:intergenic |
| TACTCATGTGACTTTATAAA+TGG | 0.206790 | 2_3:+13474243 | None:intergenic |
| TGAACCACGGAGAGGTTATT+TGG | 0.224777 | 2_3:-13476038 | Msa0279480:CDS |
| GGGAATCACAGCAATATAAT+TGG | 0.229036 | 2_3:-13475997 | Msa0279480:CDS |
| TCCGAGTATGCACAACAATT+TGG | 0.240706 | 2_3:-13474499 | Msa0279480:CDS |
| GGAGAAGAATTAGGATAGTT+TGG | 0.245726 | 2_3:+13474868 | None:intergenic |
| ATGAAGCAGAAGCTCTTTAA+TGG | 0.250114 | 2_3:-13476631 | Msa0279480:intron |
| CCAAGGCTTCAAGTTGATAA+TGG | 0.280582 | 2_3:-13478732 | Msa0279480:CDS |
| GCTGCTGCTGAGTGGGTTCA+TGG | 0.297550 | 2_3:-13475075 | Msa0279480:CDS |
| TAGAAAGGAAACAACTTAAA+TGG | 0.302145 | 2_3:-13478812 | Msa0279480:CDS |
| GCAGGTTAATCATGCCCTTT+TGG | 0.305926 | 2_3:-13475181 | Msa0279480:intron |
| TATTCAGCCTCTGCGCTTGC+TGG | 0.317270 | 2_3:-13474896 | Msa0279480:CDS |
| GAAACGAAACTCGGTGAAAT+TGG | 0.317351 | 2_3:-13480939 | Msa0279480:CDS |
| ATGAATATGGGAGAAGAATT+AGG | 0.346819 | 2_3:+13474859 | None:intergenic |
| TCCGCATTGTCATCGTCTTC+AGG | 0.348871 | 2_3:-13477436 | Msa0279480:intron |
| TCTCTATTTCGTTTAAGAAA+TGG | 0.351637 | 2_3:+13474269 | None:intergenic |
| CTCCTAGGCCAAAATTAAAA+AGG | 0.352934 | 2_3:+13474365 | None:intergenic |
| ACAATCACGTTTCAGATTAG+AGG | 0.355762 | 2_3:-13480991 | Msa0279480:CDS |
| TGATTGTCTTCCTTCCTTCA+TGG | 0.365121 | 2_3:+13481007 | None:intergenic |
| AAGTCTTTGCTATATCCTTA+AGG | 0.366345 | 2_3:+13474548 | None:intergenic |
| TTCATATCCCTCTCAAGAAA+TGG | 0.366645 | 2_3:+13476057 | None:intergenic |
| CTCACAACCTATGTCCCTTA+AGG | 0.372725 | 2_3:-13474563 | Msa0279480:CDS |
| TAACGTTATGACACCTACTA+TGG | 0.377665 | 2_3:+13478121 | None:intergenic |
| TTGGTAATTCCCTCTGGTGC+AGG | 0.389546 | 2_3:+13478255 | None:intergenic |
| TTTGCTGTATTTCTTCCAAA+AGG | 0.392527 | 2_3:+13475166 | None:intergenic |
| CAAATGTACCTTGTTCTTCT+CGG | 0.395171 | 2_3:+13478092 | None:intergenic |
| AATGAATTATTCTTAAATAG+TGG | 0.400998 | 2_3:-13474405 | Msa0279480:three_prime_UTR |
| GAATTCTCCGGCGGTGGGAT+TGG | 0.401983 | 2_3:-13479510 | Msa0279480:CDS |
| CTACTACTGTGTCAATAATT+CGG | 0.407805 | 2_3:+13475136 | None:intergenic |
| AAATGGTTTCCGAAATTCAA+TGG | 0.407843 | 2_3:+13477503 | None:intergenic |
| TGGAACACTGCCGTTGTGAT+TGG | 0.411409 | 2_3:-13476018 | Msa0279480:CDS |
| TCAGTTGATTCCCCGTCAAC+AGG | 0.414927 | 2_3:+13476126 | None:intergenic |
| CAAGGCTTCAAGTTGATAAT+GGG | 0.419020 | 2_3:-13478731 | Msa0279480:intron |
| GCTATTATTGAATAAACAAC+AGG | 0.420767 | 2_3:+13474307 | None:intergenic |
| GGAACATTCAGCTCTAAGTA+TGG | 0.422754 | 2_3:-13474472 | Msa0279480:CDS |
| GAAAGATTCCACAGCGGCGC+TGG | 0.427800 | 2_3:-13480961 | Msa0279480:CDS |
| CTGCTGCTGAGTGGGTTCAT+GGG | 0.428196 | 2_3:-13475074 | Msa0279480:CDS |
| CCATTATCAACTTGAAGCCT+TGG | 0.428325 | 2_3:+13478732 | None:intergenic |
| TTATCTCACCGGGATTCAAC+TGG | 0.430039 | 2_3:+13474826 | None:intergenic |
| GTTGAACACACGGATCTTCA+TGG | 0.433915 | 2_3:-13479450 | Msa0279480:CDS |
| ACCAAATTGTTGTGCATACT+CGG | 0.438409 | 2_3:+13474498 | None:intergenic |
| GCTATATCCTTAAGGGACAT+AGG | 0.441593 | 2_3:+13474556 | None:intergenic |
| AGTCTTTGCTATATCCTTAA+GGG | 0.444176 | 2_3:+13474549 | None:intergenic |
| AAATATAACATGGAAAATAG+TGG | 0.448116 | 2_3:-13478279 | Msa0279480:CDS |
| AGCCGCTGCTGCTGCTGAGT+GGG | 0.452314 | 2_3:-13475082 | Msa0279480:CDS |
| GATTGTCTTCCTTCCTTCAT+GGG | 0.453111 | 2_3:+13481008 | None:intergenic |
| GTCATCAAATAGCACCCATC+TGG | 0.457933 | 2_3:+13478768 | None:intergenic |
| TGAGAAGAAGTCGCCGGCGG+TGG | 0.458724 | 2_3:-13479550 | Msa0279480:CDS |
| TTGCTGTATTTCTTCCAAAA+GGG | 0.460068 | 2_3:+13475167 | None:intergenic |
| GGAATCACAGCAATATAATT+GGG | 0.466717 | 2_3:-13475996 | Msa0279480:CDS |
| TGATGATATTGTAGAGATCA+AGG | 0.471278 | 2_3:-13480269 | Msa0279480:intron |
| AGGCTCTGTGAAAGTCGAAA+TGG | 0.471589 | 2_3:+13477486 | None:intergenic |
| GGAACACTGCCGTTGTGATT+GGG | 0.476635 | 2_3:-13476017 | Msa0279480:CDS |
| CGCTGTGGAATCTTTCAGTT+CGG | 0.476886 | 2_3:+13480968 | None:intergenic |
| ACCGCCGGCGACTTCTTCTC+AGG | 0.482475 | 2_3:+13479552 | None:intergenic |
| CCGGCGGTGGGAGGGAGTAC+CGG | 0.483738 | 2_3:-13479537 | Msa0279480:CDS |
| GGAAACTTGTCTATGAATAT+GGG | 0.483866 | 2_3:+13474847 | None:intergenic |
| TCATATCCCTCTCAAGAAAT+GGG | 0.484312 | 2_3:+13476058 | None:intergenic |
| AGCAAGCGCAGAGGCTGAAT+AGG | 0.488171 | 2_3:+13474898 | None:intergenic |
| ACAATAACTTCAGGTTCTGC+AGG | 0.490279 | 2_3:+13477923 | None:intergenic |
| GAAATAACACCGCGAGCAGT+AGG | 0.494316 | 2_3:+13474520 | None:intergenic |
| CTCTGATGCAGAGAGGGCAT+TGG | 0.495323 | 2_3:-13476707 | Msa0279480:CDS |
| AAACTCATGCAGACATGTAA+AGG | 0.497836 | 2_3:+13477466 | None:intergenic |
| ATGGCAGGAGTTCACATCTT+GGG | 0.498030 | 2_3:-13474446 | Msa0279480:CDS |
| GAAGAATTAGGATAGTTTGG+AGG | 0.499904 | 2_3:+13474871 | None:intergenic |
| GGAGAAGAATTCTCCGGCGG+TGG | 0.501018 | 2_3:-13479516 | Msa0279480:CDS |
| AATTTGCAGAACCTGTTGAC+GGG | 0.505913 | 2_3:-13476137 | Msa0279480:intron |
| CTCTAAGTATGGAGAATGGC+AGG | 0.507662 | 2_3:-13474461 | Msa0279480:CDS |
| ATCTCAATATGCTTCACTAC+AGG | 0.514429 | 2_3:-13475001 | Msa0279480:intron |
| AATAATGTTTGAAACCTCCT+AGG | 0.515891 | 2_3:+13474350 | None:intergenic |
| TGAATACACAACAACAATCA+AGG | 0.525569 | 2_3:-13478223 | Msa0279480:CDS |
| CAGCCGCTGCTGCTGCTGAG+TGG | 0.526610 | 2_3:-13475083 | Msa0279480:CDS |
| ACAAGTTTCCAGTTGAATCC+CGG | 0.532358 | 2_3:-13474834 | Msa0279480:intron |
| TTTCGTTTCCAGCGCCGCTG+TGG | 0.532718 | 2_3:+13480953 | None:intergenic |
| TATAAGCCCATTTCTTGAGA+GGG | 0.534996 | 2_3:-13476064 | Msa0279480:CDS |
| CAATGCCCTCTCTGCATCAG+AGG | 0.535640 | 2_3:+13476708 | None:intergenic |
| TTGAACACACGGATCTTCAT+GGG | 0.539473 | 2_3:-13479449 | Msa0279480:CDS |
| TGTCTCTGCCGTTGAACACA+CGG | 0.541337 | 2_3:-13479460 | Msa0279480:CDS |
| GAACTTTGTTCCTGCAACAA+GGG | 0.545173 | 2_3:-13477965 | Msa0279480:CDS |
| CAGGTGGATATCACCATAGT+AGG | 0.546793 | 2_3:-13478134 | Msa0279480:CDS |
| GATGGGTGCTATTTGATGAC+AGG | 0.548271 | 2_3:-13478765 | Msa0279480:CDS |
| AGAACTTTGTTCCTGCAACA+AGG | 0.551401 | 2_3:-13477966 | Msa0279480:CDS |
| GGGATTGGATTGAAGATGAT+CGG | 0.551638 | 2_3:-13479495 | Msa0279480:CDS |
| AATGGCAGGAGTTCACATCT+TGG | 0.551776 | 2_3:-13474447 | Msa0279480:CDS |
| GAGTATGCACAACAATTTGG+TGG | 0.553199 | 2_3:-13474496 | Msa0279480:CDS |
| AGGTTGTGAGAAATTACATA+AGG | 0.561974 | 2_3:+13474576 | None:intergenic |
| AACATCCTCTGATGCAGAGA+GGG | 0.562027 | 2_3:-13476713 | Msa0279480:CDS |
| AACCCACTCAGCAGCAGCAG+CGG | 0.563410 | 2_3:+13475080 | None:intergenic |
| AATGGCCTGTGTCAAGTGAA+TGG | 0.563432 | 2_3:-13478794 | Msa0279480:CDS |
| AGAAGTCGCCGGCGGTGGGA+GGG | 0.564843 | 2_3:-13479545 | Msa0279480:CDS |
| AAAGATGGGCTGAGAGACAC+AGG | 0.565080 | 2_3:+13475027 | None:intergenic |
| CCGGTACTCCCTCCCACCGC+CGG | 0.565659 | 2_3:+13479537 | None:intergenic |
| AAGAAGTCGCCGGCGGTGGG+AGG | 0.570671 | 2_3:-13479546 | Msa0279480:CDS |
| GAGAAGAAGTCGCCGGCGGT+GGG | 0.571292 | 2_3:-13479549 | Msa0279480:CDS |
| ATTCATAGGAAAACACAAAG+AGG | 0.573823 | 2_3:-13477209 | Msa0279480:intron |
| ATGAAGATCCGTGTGTTCAA+CGG | 0.576028 | 2_3:+13479452 | None:intergenic |
| CTTTGTTCCTGCAACAAGGG+TGG | 0.576922 | 2_3:-13477962 | Msa0279480:CDS |
| CTTCAATCCAATCCCACCGC+CGG | 0.578155 | 2_3:+13479503 | None:intergenic |
| GGCATTGGAACATATTAATG+AGG | 0.584362 | 2_3:-13476692 | Msa0279480:CDS |
| CTTTGCACTGAAGTATAACA+TGG | 0.585333 | 2_3:-13476091 | Msa0279480:CDS |
| TTATAAGCCCATTTCTTGAG+AGG | 0.587724 | 2_3:-13476065 | Msa0279480:CDS |
| GCAATATAATTGGGATACAC+AGG | 0.593877 | 2_3:-13475987 | Msa0279480:CDS |
| GGTGAAATTGGTAAGAGAAG+AGG | 0.594061 | 2_3:-13480927 | Msa0279480:intron |
| TTATGGCAGTAAGGGGAATG+AGG | 0.594861 | 2_3:-13474635 | Msa0279480:intron |
| ATTTCGTTTAAGAAATGGAG+AGG | 0.597227 | 2_3:+13474274 | None:intergenic |
| TCAGCTCTAAGTATGGAGAA+TGG | 0.598733 | 2_3:-13474465 | Msa0279480:CDS |
| ACCGCCGGAGAATTCTTCTC+CGG | 0.601190 | 2_3:+13479518 | None:intergenic |
| CAAGTGAATGGTCTCCAGAT+GGG | 0.601629 | 2_3:-13478782 | Msa0279480:CDS |
| GAATTTGCAGAACCTGTTGA+CGG | 0.607240 | 2_3:-13476138 | Msa0279480:intron |
| GAGAAGAATTCTCCGGCGGT+GGG | 0.611495 | 2_3:-13479515 | Msa0279480:CDS |
| TCAAGTGAATGGTCTCCAGA+TGG | 0.615111 | 2_3:-13478783 | Msa0279480:CDS |
| AGTACCGGAGAAGAATTCTC+CGG | 0.627928 | 2_3:-13479522 | Msa0279480:CDS |
| CAACAGCTACCCATGAAGGA+AGG | 0.634284 | 2_3:-13481017 | None:intergenic |
| ACTTGTGATCCTACTGCTCG+CGG | 0.635100 | 2_3:-13474529 | Msa0279480:CDS |
| AATGAAAGAACATTTGACAA+TGG | 0.635191 | 2_3:+13475050 | None:intergenic |
| AAATAGTGGACCTGCACCAG+AGG | 0.636183 | 2_3:-13478265 | Msa0279480:CDS |
| GCGGCGCTGGAAACGAAACT+CGG | 0.640379 | 2_3:-13480948 | Msa0279480:CDS |
| TATGCACAACAATTTGGTGG+AGG | 0.647411 | 2_3:-13474493 | Msa0279480:CDS |
| AATAGTGGACCTGCACCAGA+GGG | 0.651752 | 2_3:-13478264 | Msa0279480:CDS |
| AGTACCTGAGAAGAAGTCGC+CGG | 0.652136 | 2_3:-13479556 | Msa0279480:CDS |
| CTTGAGAGGGATATGAACCA+CGG | 0.660131 | 2_3:-13476051 | Msa0279480:CDS |
| TATAATTGGGATACACAGGA+AGG | 0.665482 | 2_3:-13475983 | Msa0279480:intron |
| TATAGTAGCCGAGAAGAACA+AGG | 0.665791 | 2_3:-13478100 | Msa0279480:intron |
| ACCTCAGTTGATATTCTACA+CGG | 0.667331 | 2_3:-13477159 | Msa0279480:intron |
| ATTTGCAGAACCTGTTGACG+GGG | 0.676991 | 2_3:-13476136 | Msa0279480:intron |
| ACCTGAGAAGAAGTCGCCGG+CGG | 0.678050 | 2_3:-13479553 | Msa0279480:CDS |
| TGACAGGAAACACAACTCCA+AGG | 0.679213 | 2_3:-13478749 | Msa0279480:CDS |
| GGAGACCATTCACTTGACAC+AGG | 0.679787 | 2_3:+13478789 | None:intergenic |
| ACCTGAAGACGATGACAATG+CGG | 0.684219 | 2_3:+13477435 | None:intergenic |
| GAACATCCTCTGATGCAGAG+AGG | 0.691498 | 2_3:-13476714 | Msa0279480:CDS |
| GGAGGAACCAGCAAGCGCAG+AGG | 0.697641 | 2_3:+13474889 | None:intergenic |
| AACACACGGATCTTCATGGG+AGG | 0.700398 | 2_3:-13479446 | Msa0279480:intron |
| GAGGGATATGAACCACGGAG+AGG | 0.717220 | 2_3:-13476046 | Msa0279480:CDS |
| ACCGGAGAAGAATTCTCCGG+CGG | 0.719447 | 2_3:-13479519 | Msa0279480:CDS |
| GTTCAACGGCAGAGACAGCG+AGG | 0.731260 | 2_3:+13479466 | None:intergenic |
| ACCGTGTAGAATATCAACTG+AGG | 0.734819 | 2_3:+13477158 | None:intergenic |
| GCTGTGATTCCCAATCACAA+CGG | 0.738812 | 2_3:+13476008 | None:intergenic |
| TGTTCCAAATAACCTCTCCG+TGG | 0.747550 | 2_3:+13476034 | None:intergenic |
| CGAACTGAAAGATTCCACAG+CGG | 0.825775 | 2_3:-13480967 | Msa0279480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATTTTTTTTTTCTTCTA+GGG | + | chr2_3:13474397-13474416 | None:intergenic | 10.0% |
| !!! | TTATATTTTTTTTTTCTTCT+AGG | + | chr2_3:13474398-13474417 | None:intergenic | 10.0% |
| !!! | TTCAAAGTAATTTTTTTAAA+AGG | - | chr2_3:13474597-13474616 | Msa0279480:CDS | 10.0% |
| !! | ATATATTGATAAAGTATAAA+AGG | + | chr2_3:13475358-13475377 | None:intergenic | 10.0% |
| !! | AAACTAAATTAGAAAATAAA+TGG | - | chr2_3:13475392-13475411 | Msa0279480:intron | 10.0% |
| !!! | ATTTAATTTGAATAAAAAAG+AGG | - | chr2_3:13476027-13476046 | Msa0279480:CDS | 10.0% |
| !! | TAAAAAAATAAAAGACATTA+GGG | + | chr2_3:13477864-13477883 | None:intergenic | 10.0% |
| !! | ATAAAAAAATAAAAGACATT+AGG | + | chr2_3:13477865-13477884 | None:intergenic | 10.0% |
| !! | TGAATTTACAATTTATAAAT+TGG | - | chr2_3:13478413-13478432 | Msa0279480:intron | 10.0% |
| !!! | ATATTTTTTTTTTCTTCTAG+GGG | + | chr2_3:13474396-13474415 | None:intergenic | 15.0% |
| !! | AATATATGTTGTTAAGTTAT+TGG | - | chr2_3:13474955-13474974 | Msa0279480:intron | 15.0% |
| !!! | TATTTTGGTAAATTACAAAA+TGG | - | chr2_3:13475448-13475467 | Msa0279480:intron | 15.0% |
| !!! | ATTTTGGTAAATTACAAAAT+GGG | - | chr2_3:13475449-13475468 | Msa0279480:intron | 15.0% |
| !! | TGAAAAGAAAAAGAAAAAAA+AGG | - | chr2_3:13475492-13475511 | Msa0279480:intron | 15.0% |
| !! | GAAAAGAAAAAGAAAAAAAA+GGG | - | chr2_3:13475493-13475512 | Msa0279480:intron | 15.0% |
| !! | AAAAGAAAAAGAAAAAAAAG+GGG | - | chr2_3:13475494-13475513 | Msa0279480:intron | 15.0% |
| !!! | TAATTTCGGTTTTAATTATT+AGG | - | chr2_3:13475988-13476007 | Msa0279480:CDS | 15.0% |
| !!! | AATTTCGGTTTTAATTATTA+GGG | - | chr2_3:13475989-13476008 | Msa0279480:CDS | 15.0% |
| !!! | TGGAAATTTTAATTTTTTGT+GGG | - | chr2_3:13476097-13476116 | Msa0279480:CDS | 15.0% |
| !! | AACAAATCATAAATAACAAA+TGG | + | chr2_3:13476357-13476376 | None:intergenic | 15.0% |
| !!! | CAAATAATTTTATAAACCTA+AGG | + | chr2_3:13478172-13478191 | None:intergenic | 15.0% |
| !! | AAAATTCAAAATTTGATTGT+AGG | - | chr2_3:13479044-13479063 | Msa0279480:intron | 15.0% |
| !! | ATTGACATTAATATATGTTA+TGG | - | chr2_3:13479470-13479489 | Msa0279480:CDS | 15.0% |
| !! | TGTATTAAAAAAATTTACAG+TGG | + | chr2_3:13479940-13479959 | None:intergenic | 15.0% |
| !! | AATGAATTATTCTTAAATAG+TGG | - | chr2_3:13480850-13480869 | Msa0279480:intron | 15.0% |
| !!! | AATATACCTTTTATATGAAC+AGG | + | chr2_3:13474934-13474953 | None:intergenic | 20.0% |
| !! | GCAATTTGTAGTATATATAT+AGG | + | chr2_3:13475021-13475040 | None:intergenic | 20.0% |
| !!! | GATTATTACCTTTTGAAAAA+AGG | + | chr2_3:13475331-13475350 | None:intergenic | 20.0% |
| !!! | CTTTTTCTTTTCACATATAT+AGG | + | chr2_3:13475485-13475504 | None:intergenic | 20.0% |
| !!! | CATTTTTTTTCTTCTTTTCT+GGG | - | chr2_3:13475964-13475983 | Msa0279480:intron | 20.0% |
| !!! | CTGGAAATTTTAATTTTTTG+TGG | - | chr2_3:13476096-13476115 | Msa0279480:CDS | 20.0% |
| !! | TCAGATTCTTGAAAAAAAAA+TGG | - | chr2_3:13476204-13476223 | Msa0279480:intron | 20.0% |
| !! | CAAAAACACATTATTATGAA+AGG | + | chr2_3:13476253-13476272 | None:intergenic | 20.0% |
| !!! | TTTTGGGATTAAATATAACA+TGG | - | chr2_3:13476966-13476985 | Msa0279480:intron | 20.0% |
| !! | AAATATAACATGGAAAATAG+TGG | - | chr2_3:13476976-13476995 | Msa0279480:intron | 20.0% |
| !!! | TGTGTATTCATATATTTTGT+TGG | + | chr2_3:13477022-13477041 | None:intergenic | 20.0% |
| !!! | TTACTTTGTTCCATTTTTAA+AGG | - | chr2_3:13477204-13477223 | Msa0279480:CDS | 20.0% |
| !!! | TATCACTAAATTTGTTTTGA+TGG | - | chr2_3:13477248-13477267 | Msa0279480:intron | 20.0% |
| !!! | ACTTTTCAAAACAAAAGTTA+AGG | + | chr2_3:13477373-13477392 | None:intergenic | 20.0% |
| !! | AAAATAGTTGAAGAACTAAA+TGG | - | chr2_3:13477406-13477425 | Msa0279480:intron | 20.0% |
| !! | AGATTTCTATCTTTATTCAT+AGG | - | chr2_3:13478032-13478051 | Msa0279480:intron | 20.0% |
| !! | TACAATTTATAAATTGGCTA+TGG | - | chr2_3:13478419-13478438 | Msa0279480:intron | 20.0% |
| !! | TTTATATAAACAAACATCGA+AGG | + | chr2_3:13479027-13479046 | None:intergenic | 20.0% |
| !!! | AAATTTGATTGTAGGAATTT+TGG | - | chr2_3:13479052-13479071 | Msa0279480:intron | 20.0% |
| !! | TATTATATGGAAGGAAATAT+AGG | - | chr2_3:13479416-13479435 | Msa0279480:intron | 20.0% |
| !! | ACATTAATATATGTTATGGT+AGG | - | chr2_3:13479474-13479493 | Msa0279480:CDS | 20.0% |
| !! | TTTAGAGAAATATGGAATAT+CGG | + | chr2_3:13479692-13479711 | None:intergenic | 20.0% |
| !!! | TTGATTTGCTTTTCTAAAAA+GGG | - | chr2_3:13479738-13479757 | Msa0279480:intron | 20.0% |
| !!! | CATATTGAGATTTTAAAGAT+GGG | + | chr2_3:13480245-13480264 | None:intergenic | 20.0% |
| !!! | TGCTTTAATTTTGCTAATTT+CGG | - | chr2_3:13480473-13480492 | Msa0279480:intron | 20.0% |
| !!! | TAGTGTTATTATATACGTTA+TGG | - | chr2_3:13480603-13480622 | Msa0279480:intron | 20.0% |
| !!! | TATGAAGACCTTTTTAATTT+TGG | - | chr2_3:13480882-13480901 | Msa0279480:intron | 20.0% |
| !!! | TGTTTTGGACAATTTAAAAC+TGG | + | chr2_3:13474450-13474469 | None:intergenic | 25.0% |
| ! | TTGCACATAACTTATATACA+GGG | + | chr2_3:13474561-13474580 | None:intergenic | 25.0% |
| ! | ATTGCACATAACTTATATAC+AGG | + | chr2_3:13474562-13474581 | None:intergenic | 25.0% |
| ! | AACGAACTATAATTAACCTT+CGG | - | chr2_3:13474652-13474671 | Msa0279480:intron | 25.0% |
| ! | GTTAAAGTTAGGTTAATTAG+GGG | + | chr2_3:13474755-13474774 | None:intergenic | 25.0% |
| ! | GGTTAAAGTTAGGTTAATTA+GGG | + | chr2_3:13474756-13474775 | None:intergenic | 25.0% |
| ! | AGGTTAAAGTTAGGTTAATT+AGG | + | chr2_3:13474757-13474776 | None:intergenic | 25.0% |
| ! | TCGAATCAAAACTTGATTAA+TGG | - | chr2_3:13475138-13475157 | Msa0279480:CDS | 25.0% |
| !!! | TGATTTTGCCTTTTTTCAAA+AGG | - | chr2_3:13475320-13475339 | Msa0279480:intron | 25.0% |
| ! | AATTAGAAAATAAATGGCCA+TGG | - | chr2_3:13475398-13475417 | Msa0279480:intron | 25.0% |
| ! | TTTCTTTCAATCTGATGTTA+AGG | - | chr2_3:13475929-13475948 | Msa0279480:intron | 25.0% |
| ! | TTCTTTCAATCTGATGTTAA+GGG | - | chr2_3:13475930-13475949 | Msa0279480:intron | 25.0% |
| !!! | GCATTTTTTTTCTTCTTTTC+TGG | - | chr2_3:13475963-13475982 | Msa0279480:intron | 25.0% |
| !!! | TTGTTGTTGTTTTCTGAATT+AGG | - | chr2_3:13476157-13476176 | Msa0279480:intron | 25.0% |
| !!! | TGTTGTTGTTTTCTGAATTA+GGG | - | chr2_3:13476158-13476177 | Msa0279480:intron | 25.0% |
| !!! | AAAATGGAATTTTGTTGTCT+TGG | - | chr2_3:13476220-13476239 | Msa0279480:intron | 25.0% |
| !!! | TAATGTGTTTTTGCTGATAT+TGG | - | chr2_3:13476260-13476279 | Msa0279480:intron | 25.0% |
| !!! | ATTGGTAATGTTATGTGATT+TGG | - | chr2_3:13476278-13476297 | Msa0279480:intron | 25.0% |
| ! | TGGTTATGTTTATGATTGAT+AGG | - | chr2_3:13476298-13476317 | Msa0279480:intron | 25.0% |
| ! | TATGTTTATGATTGATAGGT+TGG | - | chr2_3:13476302-13476321 | Msa0279480:intron | 25.0% |
| !! | ATTTTTCATTATGCTGTTCT+AGG | - | chr2_3:13476404-13476423 | Msa0279480:intron | 25.0% |
| !!! | ATTTTTGGGATTATGTAGAA+AGG | - | chr2_3:13476428-13476447 | Msa0279480:intron | 25.0% |
| ! | TAGAAAGGAAACAACTTAAA+TGG | - | chr2_3:13476443-13476462 | Msa0279480:intron | 25.0% |
| !! | ATAAACGATTGAAAGTTTTC+AGG | + | chr2_3:13476566-13476585 | None:intergenic | 25.0% |
| ! | AATCGTTTATCTTTATCCAT+GGG | - | chr2_3:13476576-13476595 | Msa0279480:intron | 25.0% |
| !! | AAATCTAAAGTTAAATCCCT+TGG | + | chr2_3:13476693-13476712 | None:intergenic | 25.0% |
| !!! | TCACTTGGTTTTATATAACT+TGG | - | chr2_3:13476721-13476740 | Msa0279480:CDS | 25.0% |
| ! | AAAATTCTCCCAATGATAAA+TGG | - | chr2_3:13476826-13476845 | Msa0279480:intron | 25.0% |
| ! | AGACATTACCATTTATCATT+GGG | + | chr2_3:13476837-13476856 | None:intergenic | 25.0% |
| ! | GAAAATAAATTAATGTAGCC+AGG | + | chr2_3:13477100-13477119 | None:intergenic | 25.0% |
| !!! | CTACATTAATTTATTTTCGC+AGG | - | chr2_3:13477102-13477121 | Msa0279480:intron | 25.0% |
| ! | TTTAGTGATACAATGTCTTA+AGG | + | chr2_3:13477238-13477257 | None:intergenic | 25.0% |
| !!! | TTTGGTTTTGGTTCTAATAA+TGG | - | chr2_3:13477544-13477563 | Msa0279480:intron | 25.0% |
| !! | AATTCTGGAAGAAATAAGAT+TGG | + | chr2_3:13477705-13477724 | None:intergenic | 25.0% |
| ! | TAACTCATATGAGTTAATTC+TGG | + | chr2_3:13477720-13477739 | None:intergenic | 25.0% |
| !! | TCAACTTTTCCATTGAATTT+CGG | - | chr2_3:13477743-13477762 | Msa0279480:intron | 25.0% |
| ! | TGATATTATATCTGCAAACA+TGG | - | chr2_3:13478141-13478160 | Msa0279480:intron | 25.0% |
| !!! | ATTGAAGTATTTTGTCAAAG+TGG | - | chr2_3:13478225-13478244 | Msa0279480:CDS | 25.0% |
| !!! | TTGAAGTATTTTGTCAAAGT+GGG | - | chr2_3:13478226-13478245 | Msa0279480:CDS | 25.0% |
| ! | AGTGAAAATACTAATCAGTT+AGG | + | chr2_3:13478466-13478485 | None:intergenic | 25.0% |
| !! | TAACTGATTAGTATTTTCAC+TGG | - | chr2_3:13478465-13478484 | Msa0279480:intron | 25.0% |
| ! | GCATAAATTACTACACTAAA+AGG | + | chr2_3:13478802-13478821 | None:intergenic | 25.0% |
| ! | TTTATTAGATAGCTGAAAGA+CGG | + | chr2_3:13479340-13479359 | None:intergenic | 25.0% |
| ! | CAAATTCTGTTTCAAATACA+GGG | + | chr2_3:13479445-13479464 | None:intergenic | 25.0% |
| ! | AAGTTTAACAGTTTAAAGGA+TGG | + | chr2_3:13479502-13479521 | None:intergenic | 25.0% |
| ! | CCAAAAGTTTAACAGTTTAA+AGG | + | chr2_3:13479506-13479525 | None:intergenic | 25.0% |
| !! | CCTTTAAACTGTTAAACTTT+TGG | - | chr2_3:13479503-13479522 | Msa0279480:CDS | 25.0% |
| ! | AAACATGTTAAACTCTTATC+TGG | - | chr2_3:13479625-13479644 | Msa0279480:intron | 25.0% |
| ! | AATTATTCTAGCATAGATGT+AGG | - | chr2_3:13479666-13479685 | Msa0279480:intron | 25.0% |
| !!! | GTTGATTTGCTTTTCTAAAA+AGG | - | chr2_3:13479737-13479756 | Msa0279480:intron | 25.0% |
| ! | AAACTCATAAAAGCTATTAG+AGG | - | chr2_3:13479791-13479810 | Msa0279480:intron | 25.0% |
| ! | AACTCATAAAAGCTATTAGA+GGG | - | chr2_3:13479792-13479811 | Msa0279480:intron | 25.0% |
| !! | CATTTGGAATATGTTTGATT+TGG | - | chr2_3:13479841-13479860 | Msa0279480:intron | 25.0% |
| ! | ACTGTAAACTAATCAAACAT+GGG | + | chr2_3:13479895-13479914 | None:intergenic | 25.0% |
| ! | AACTGTAAACTAATCAAACA+TGG | + | chr2_3:13479896-13479915 | None:intergenic | 25.0% |
| ! | AAAATTTACAGTGGCTTAAT+GGG | + | chr2_3:13479931-13479950 | None:intergenic | 25.0% |
| ! | AAAAATTTACAGTGGCTTAA+TGG | + | chr2_3:13479932-13479951 | None:intergenic | 25.0% |
| ! | AATGAAAGAACATTTGACAA+TGG | + | chr2_3:13480208-13480227 | None:intergenic | 25.0% |
| !!! | GCATATTGAGATTTTAAAGA+TGG | + | chr2_3:13480246-13480265 | None:intergenic | 25.0% |
| ! | AAAAATCAGTTGCAAAATCT+GGG | + | chr2_3:13480288-13480307 | None:intergenic | 25.0% |
| ! | AAAAAATCAGTTGCAAAATC+TGG | + | chr2_3:13480289-13480308 | None:intergenic | 25.0% |
| ! | AAGGTGATAAAACACAATTA+AGG | + | chr2_3:13480330-13480349 | None:intergenic | 25.0% |
| ! | TTAGCAAAATTAAAGCATGT+GGG | + | chr2_3:13480470-13480489 | None:intergenic | 25.0% |
| ! | ATTAGCAAAATTAAAGCATG+TGG | + | chr2_3:13480471-13480490 | None:intergenic | 25.0% |
| ! | GCAGCAAAATTTAAAGATAA+GGG | + | chr2_3:13480566-13480585 | None:intergenic | 25.0% |
| ! | GCTATTATTGAATAAACAAC+AGG | + | chr2_3:13480951-13480970 | None:intergenic | 25.0% |
| ! | TCTCTATTTCGTTTAAGAAA+TGG | + | chr2_3:13480989-13481008 | None:intergenic | 25.0% |
| TTGTCCAAAACACAAAAAGA+AGG | - | chr2_3:13474458-13474477 | Msa0279480:CDS | 30.0% | |
| TGTCCAAAACACAAAAAGAA+GGG | - | chr2_3:13474459-13474478 | Msa0279480:CDS | 30.0% | |
| ! | AGACTCATTCATTTTCATGA+AGG | + | chr2_3:13474526-13474545 | None:intergenic | 30.0% |
| TGCACATAACTTATATACAG+GGG | + | chr2_3:13474560-13474579 | None:intergenic | 30.0% | |
| AAAGGAATCAAGTCAAAATG+TGG | - | chr2_3:13474615-13474634 | Msa0279480:CDS | 30.0% | |
| CCTAATGATAGGTTAAAGTT+AGG | + | chr2_3:13474766-13474785 | None:intergenic | 30.0% | |
| CCTAACTTTAACCTATCATT+AGG | - | chr2_3:13474763-13474782 | Msa0279480:intron | 30.0% | |
| TCATCACCTGTTCATATAAA+AGG | - | chr2_3:13474925-13474944 | Msa0279480:intron | 30.0% | |
| TGATGATATTGTAGAGATCA+AGG | - | chr2_3:13474986-13475005 | Msa0279480:intron | 30.0% | |
| TCATCACAATTGTGATTGAA+TGG | - | chr2_3:13475165-13475184 | Msa0279480:CDS | 30.0% | |
| AAAAATGAGCGCATAAATGA+TGG | - | chr2_3:13475295-13475314 | Msa0279480:intron | 30.0% | |
| ! | TTTTCACATATATAGGCAAG+GGG | + | chr2_3:13475478-13475497 | None:intergenic | 30.0% |
| ! | CTTTTCACATATATAGGCAA+GGG | + | chr2_3:13475479-13475498 | None:intergenic | 30.0% |
| ! | TCTTTTCACATATATAGGCA+AGG | + | chr2_3:13475480-13475499 | None:intergenic | 30.0% |
| ! | CTTCTTTTCTGGGTTAATTT+CGG | - | chr2_3:13475974-13475993 | Msa0279480:intron | 30.0% |
| !! | GGTAATTTGCTAATGTTTGA+TGG | - | chr2_3:13476048-13476067 | Msa0279480:CDS | 30.0% |
| ! | ATTAGGGTATGCTTGAATTT+TGG | - | chr2_3:13476174-13476193 | Msa0279480:intron | 30.0% |
| ! | TTAGGGTATGCTTGAATTTT+GGG | - | chr2_3:13476175-13476194 | Msa0279480:intron | 30.0% |
| !! | GAATTTTGTTGTCTTGGTTA+AGG | - | chr2_3:13476226-13476245 | Msa0279480:intron | 30.0% |
| !! | TATGCTGTTCTAGGTATTTT+TGG | - | chr2_3:13476413-13476432 | Msa0279480:intron | 30.0% |
| !! | ATGCTGTTCTAGGTATTTTT+GGG | - | chr2_3:13476414-13476433 | Msa0279480:intron | 30.0% |
| CAATCGTTTATCTTTATCCA+TGG | - | chr2_3:13476575-13476594 | Msa0279480:intron | 30.0% | |
| TAGATTTGATTGCAATCACT+TGG | - | chr2_3:13476706-13476725 | Msa0279480:CDS | 30.0% | |
| ! | ATCATTGGGAGAATTTTTGA+GGG | + | chr2_3:13476823-13476842 | None:intergenic | 30.0% |
| ! | TATCATTGGGAGAATTTTTG+AGG | + | chr2_3:13476824-13476843 | None:intergenic | 30.0% |
| GAGACATTACCATTTATCAT+TGG | + | chr2_3:13476838-13476857 | None:intergenic | 30.0% | |
| ! | ATGATAAATGGTAATGTCTC+AGG | - | chr2_3:13476838-13476857 | Msa0279480:intron | 30.0% |
| ! | CAGTAACAATCATTTAGAGT+TGG | + | chr2_3:13476922-13476941 | None:intergenic | 30.0% |
| AAATGATTGTTACTGTCAAC+TGG | - | chr2_3:13476927-13476946 | Msa0279480:intron | 30.0% | |
| ! | TTTCCATTATGCAGGATTTT+GGG | - | chr2_3:13476950-13476969 | Msa0279480:intron | 30.0% |
| TGAATACACAACAACAATCA+AGG | - | chr2_3:13477032-13477051 | Msa0279480:intron | 30.0% | |
| !! | CATTAATTTATTTTCGCAGG+TGG | - | chr2_3:13477105-13477124 | Msa0279480:intron | 30.0% |
| ! | GGAAACACAACCTTTAAAAA+TGG | + | chr2_3:13477217-13477236 | None:intergenic | 30.0% |
| AACCTGAAGTTATTGTTACA+AGG | - | chr2_3:13477339-13477358 | Msa0279480:intron | 30.0% | |
| ATAGTTGAAGAACTAAATGG+CGG | - | chr2_3:13477409-13477428 | Msa0279480:intron | 30.0% | |
| TCATGAGCAAACACAATAAA+AGG | + | chr2_3:13477477-13477496 | None:intergenic | 30.0% | |
| ! | TACCTTGTCTTTGTTACTTA+TGG | - | chr2_3:13477514-13477533 | Msa0279480:CDS | 30.0% |
| GTTCTAATATGATTTGAGTC+TGG | - | chr2_3:13477617-13477636 | Msa0279480:intron | 30.0% | |
| AAATGGTTTCCGAAATTCAA+TGG | + | chr2_3:13477755-13477774 | None:intergenic | 30.0% | |
| ATTCATAGGAAAACACAAAG+AGG | - | chr2_3:13478046-13478065 | Msa0279480:intron | 30.0% | |
| ATACTAATCAGTTAGGAAGA+GGG | + | chr2_3:13478459-13478478 | None:intergenic | 30.0% | |
| AATACTAATCAGTTAGGAAG+AGG | + | chr2_3:13478460-13478479 | None:intergenic | 30.0% | |
| TTGCAGCATAATATAAGAAG+AGG | + | chr2_3:13478656-13478675 | None:intergenic | 30.0% | |
| ! | TTTTCCATCATGACAAAGAA+AGG | - | chr2_3:13478892-13478911 | Msa0279480:intron | 30.0% |
| TTTCCATCATGACAAAGAAA+GGG | - | chr2_3:13478893-13478912 | Msa0279480:intron | 30.0% | |
| GGAATCACAGCAATATAATT+GGG | - | chr2_3:13479259-13479278 | Msa0279480:intron | 30.0% | |
| CCAAATTCTGTTTCAAATAC+AGG | + | chr2_3:13479446-13479465 | None:intergenic | 30.0% | |
| ! | CCTGTATTTGAAACAGAATT+TGG | - | chr2_3:13479443-13479462 | Msa0279480:intron | 30.0% |
| ! | TGTTAAACTTTTGGCATGAA+TGG | - | chr2_3:13479512-13479531 | Msa0279480:CDS | 30.0% |
| ACAAGGGTTGAAAACAATTT+CGG | + | chr2_3:13479540-13479559 | None:intergenic | 30.0% | |
| ATAAAACAACTGACCTCTAT+TGG | + | chr2_3:13479596-13479615 | None:intergenic | 30.0% | |
| !! | GGTCAGTTGTTTTATATTGA+TGG | - | chr2_3:13479601-13479620 | Msa0279480:intron | 30.0% |
| AAAGACGGTTTAGAGAAATA+TGG | + | chr2_3:13479700-13479719 | None:intergenic | 30.0% | |
| ATATGCTACTGTCATTAACT+TGG | - | chr2_3:13479815-13479834 | Msa0279480:intron | 30.0% | |
| TTGCTGTATTTCTTCCAAAA+GGG | + | chr2_3:13480091-13480110 | None:intergenic | 30.0% | |
| ! | TTTGCTGTATTTCTTCCAAA+AGG | + | chr2_3:13480092-13480111 | None:intergenic | 30.0% |
| CTACTACTGTGTCAATAATT+CGG | + | chr2_3:13480122-13480141 | None:intergenic | 30.0% | |
| ATGAATATGGGAGAAGAATT+AGG | + | chr2_3:13480399-13480418 | None:intergenic | 30.0% | |
| GGAAACTTGTCTATGAATAT+GGG | + | chr2_3:13480411-13480430 | None:intergenic | 30.0% | |
| TGGAAACTTGTCTATGAATA+TGG | + | chr2_3:13480412-13480431 | None:intergenic | 30.0% | |
| AAAATGTTCCATTATCTCAC+CGG | + | chr2_3:13480443-13480462 | None:intergenic | 30.0% | |
| TAGCAAAATTAAAGCATGTG+GGG | + | chr2_3:13480469-13480488 | None:intergenic | 30.0% | |
| ! | GTATTTTCTCTTCCAAATAG+TGG | - | chr2_3:13480510-13480529 | Msa0279480:intron | 30.0% |
| CGCAGCAAAATTTAAAGATA+AGG | + | chr2_3:13480567-13480586 | None:intergenic | 30.0% | |
| TTATATACGTTATGGCAGTA+AGG | - | chr2_3:13480611-13480630 | Msa0279480:intron | 30.0% | |
| TATATACGTTATGGCAGTAA+GGG | - | chr2_3:13480612-13480631 | Msa0279480:intron | 30.0% | |
| AGGTTGTGAGAAATTACATA+AGG | + | chr2_3:13480682-13480701 | None:intergenic | 30.0% | |
| ! | AGTCTTTGCTATATCCTTAA+GGG | + | chr2_3:13480709-13480728 | None:intergenic | 30.0% |
| ! | AAGTCTTTGCTATATCCTTA+AGG | + | chr2_3:13480710-13480729 | None:intergenic | 30.0% |
| ! | AATAATGTTTGAAACCTCCT+AGG | + | chr2_3:13480908-13480927 | None:intergenic | 30.0% |
| ATTTCGTTTAAGAAATGGAG+AGG | + | chr2_3:13480984-13481003 | None:intergenic | 30.0% | |
| ACAATCACGTTTCAGATTAG+AGG | - | chr2_3:13474264-13474283 | Msa0279480:three_prime_UTR | 35.0% | |
| ! | AGACCCTTCTTTTTGTGTTT+TGG | + | chr2_3:13474465-13474484 | None:intergenic | 35.0% |
| AATTAACCTTCGGCCAAAAT+TGG | - | chr2_3:13474662-13474681 | Msa0279480:intron | 35.0% | |
| ATTAACCTTCGGCCAAAATT+GGG | - | chr2_3:13474663-13474682 | Msa0279480:intron | 35.0% | |
| ! | TGCATTCTATGACCCAATTT+TGG | + | chr2_3:13474678-13474697 | None:intergenic | 35.0% |
| AAAGTTAGGTTAATTAGGGG+TGG | + | chr2_3:13474752-13474771 | None:intergenic | 35.0% | |
| GAACAGGTGATGAATAGATA+GGG | + | chr2_3:13474918-13474937 | None:intergenic | 35.0% | |
| TGAACAGGTGATGAATAGAT+AGG | + | chr2_3:13474919-13474938 | None:intergenic | 35.0% | |
| ! | ATTACCATTTTGCCCTTATG+AGG | - | chr2_3:13475423-13475442 | Msa0279480:intron | 35.0% |
| ! | TTACCATTTTGCCCTTATGA+GGG | - | chr2_3:13475424-13475443 | Msa0279480:intron | 35.0% |
| TACCAAAATACCCCTCATAA+GGG | + | chr2_3:13475438-13475457 | None:intergenic | 35.0% | |
| TTACCAAAATACCCCTCATA+AGG | + | chr2_3:13475439-13475458 | None:intergenic | 35.0% | |
| AAAAAAAGGGGAGAGAGAAA+TGG | - | chr2_3:13475506-13475525 | Msa0279480:intron | 35.0% | |
| AAAAAAGGGGAGAGAGAAAT+GGG | - | chr2_3:13475507-13475526 | Msa0279480:intron | 35.0% | |
| AGAGAAAAGAGAGAGAGAAA+CGG | - | chr2_3:13475596-13475615 | Msa0279480:intron | 35.0% | |
| TGATCTCAGATGAACAAAAG+AGG | + | chr2_3:13475846-13475865 | None:intergenic | 35.0% | |
| TTGTTGCTGAGATTTGAGTA+TGG | - | chr2_3:13476121-13476140 | Msa0279480:CDS | 35.0% | |
| ! | TTATGATTGATAGGTTGGAG+TGG | - | chr2_3:13476307-13476326 | Msa0279480:intron | 35.0% |
| ! | GACATTTTGTATCCAAGAGA+AGG | - | chr2_3:13476329-13476348 | Msa0279480:intron | 35.0% |
| TAACAAATGGTACCTTCTCT+TGG | + | chr2_3:13476344-13476363 | None:intergenic | 35.0% | |
| !! | CAAGGCTTCAAGTTGATAAT+GGG | - | chr2_3:13476524-13476543 | Msa0279480:intron | 35.0% |
| AGTTAAATCCCTTGGTTACA+GGG | + | chr2_3:13476685-13476704 | None:intergenic | 35.0% | |
| AAGTTAAATCCCTTGGTTAC+AGG | + | chr2_3:13476686-13476705 | None:intergenic | 35.0% | |
| ! | GTTTCCATTATGCAGGATTT+TGG | - | chr2_3:13476949-13476968 | Msa0279480:intron | 35.0% |
| AATCCCAAAATCCTGCATAA+TGG | + | chr2_3:13476956-13476975 | None:intergenic | 35.0% | |
| !!! | ATTTTGTTGGTAATTCCCTC+TGG | + | chr2_3:13477009-13477028 | None:intergenic | 35.0% |
| TAACGTTATGACACCTACTA+TGG | + | chr2_3:13477137-13477156 | None:intergenic | 35.0% | |
| CAAATGTACCTTGTTCTTCT+CGG | + | chr2_3:13477166-13477185 | None:intergenic | 35.0% | |
| CACCTTGTAACAATAACTTC+AGG | + | chr2_3:13477344-13477363 | None:intergenic | 35.0% | |
| CACCATAAGTAACAAAGACA+AGG | + | chr2_3:13477519-13477538 | None:intergenic | 35.0% | |
| ! | CTTGTCTTTGTTACTTATGG+TGG | - | chr2_3:13477517-13477536 | Msa0279480:CDS | 35.0% |
| ! | GTTACTTATGGTGGTTGTTT+TGG | - | chr2_3:13477526-13477545 | Msa0279480:CDS | 35.0% |
| !!! | TATGGTGGTTGTTTTGGTTT+TGG | - | chr2_3:13477532-13477551 | Msa0279480:CDS | 35.0% |
| AATGGCTAATGATTTGAGTC+TGG | - | chr2_3:13477562-13477581 | Msa0279480:intron | 35.0% | |
| !! | TTTGAGTCTGGTGTTACTTA+TGG | - | chr2_3:13477574-13477593 | Msa0279480:intron | 35.0% |
| !! | TTTGAGTCTGGTGTTACTTA+TGG | - | chr2_3:13477574-13477593 | Msa0279480:intron | 35.0% |
| ! | GGTGGTCGTATGTTAATTTT+TGG | - | chr2_3:13477650-13477669 | Msa0279480:intron | 35.0% |
| AAACTCATGCAGACATGTAA+AGG | + | chr2_3:13477792-13477811 | None:intergenic | 35.0% | |
| ! | ACCTCAGTTGATATTCTACA+CGG | - | chr2_3:13478096-13478115 | Msa0279480:intron | 35.0% |
| ACACGGTTGTTTGAATTGTA+AGG | - | chr2_3:13478113-13478132 | Msa0279480:CDS | 35.0% | |
| AAAAACAGTCTACTGCTTGA+TGG | - | chr2_3:13478333-13478352 | Msa0279480:intron | 35.0% | |
| TTCCTCTTCACAAAATCTAG+AGG | - | chr2_3:13478386-13478405 | Msa0279480:intron | 35.0% | |
| ! | AACCTCTAGATTTTGTGAAG+AGG | + | chr2_3:13478391-13478410 | None:intergenic | 35.0% |
| TACTAATCAGTTAGGAAGAG+GGG | + | chr2_3:13478458-13478477 | None:intergenic | 35.0% | |
| ! | GGCATTGGAACATATTAATG+AGG | - | chr2_3:13478563-13478582 | Msa0279480:intron | 35.0% |
| ATGAAGCAGAAGCTCTTTAA+TGG | - | chr2_3:13478624-13478643 | Msa0279480:intron | 35.0% | |
| !! | TTATGCCAATTGATTCGAGT+TGG | - | chr2_3:13478816-13478835 | Msa0279480:CDS | 35.0% |
| GTTAACCAACTCGAATCAAT+TGG | + | chr2_3:13478824-13478843 | None:intergenic | 35.0% | |
| TTTCCCTTTCTTTGTCATGA+TGG | + | chr2_3:13478899-13478918 | None:intergenic | 35.0% | |
| CATGACAAAGAAAGGGAAAA+AGG | - | chr2_3:13478900-13478919 | Msa0279480:intron | 35.0% | |
| ACACTTTATCGACCAAGAAA+AGG | - | chr2_3:13478981-13479000 | Msa0279480:intron | 35.0% | |
| ! | TCTCAAAGATAGCCTTTTCT+TGG | + | chr2_3:13478996-13479015 | None:intergenic | 35.0% |
| ! | GAATTTTGGATGATGCCATT+TGG | - | chr2_3:13479066-13479085 | Msa0279480:intron | 35.0% |
| CTTTGCACTGAAGTATAACA+TGG | - | chr2_3:13479164-13479183 | Msa0279480:intron | 35.0% | |
| TTATAAGCCCATTTCTTGAG+AGG | - | chr2_3:13479190-13479209 | Msa0279480:intron | 35.0% | |
| TATAAGCCCATTTCTTGAGA+GGG | - | chr2_3:13479191-13479210 | Msa0279480:intron | 35.0% | |
| TCATATCCCTCTCAAGAAAT+GGG | + | chr2_3:13479200-13479219 | None:intergenic | 35.0% | |
| TTCATATCCCTCTCAAGAAA+TGG | + | chr2_3:13479201-13479220 | None:intergenic | 35.0% | |
| GGGAATCACAGCAATATAAT+TGG | - | chr2_3:13479258-13479277 | Msa0279480:intron | 35.0% | |
| GCAATATAATTGGGATACAC+AGG | - | chr2_3:13479268-13479287 | Msa0279480:intron | 35.0% | |
| TATAATTGGGATACACAGGA+AGG | - | chr2_3:13479272-13479291 | Msa0279480:intron | 35.0% | |
| CTTTCTACTTCCACTTCTAT+TGG | - | chr2_3:13479308-13479327 | Msa0279480:intron | 35.0% | |
| ! | CACTGAGAGTGCATATTATA+TGG | - | chr2_3:13479403-13479422 | Msa0279480:intron | 35.0% |
| ! | GAGAGTGCATATTATATGGA+AGG | - | chr2_3:13479407-13479426 | Msa0279480:intron | 35.0% |
| TGAAGCAAGTACTTCAAAGA+CGG | + | chr2_3:13479715-13479734 | None:intergenic | 35.0% | |
| ! | CAATAACCGATCTGATGTTT+TGG | - | chr2_3:13480018-13480037 | Msa0279480:intron | 35.0% |
| CAAAGACCAAAACATCAGAT+CGG | + | chr2_3:13480027-13480046 | None:intergenic | 35.0% | |
| GATATAGAGTTTGTGTACTG+TGG | - | chr2_3:13480052-13480071 | Msa0279480:intron | 35.0% | |
| ATCTCAATATGCTTCACTAC+AGG | - | chr2_3:13480254-13480273 | Msa0279480:intron | 35.0% | |
| AATATGCTTCACTACAGGTA+TGG | - | chr2_3:13480259-13480278 | Msa0279480:intron | 35.0% | |
| GAAGAATTAGGATAGTTTGG+AGG | + | chr2_3:13480387-13480406 | None:intergenic | 35.0% | |
| GGAGAAGAATTAGGATAGTT+TGG | + | chr2_3:13480390-13480409 | None:intergenic | 35.0% | |
| AAATGTTCCATTATCTCACC+GGG | + | chr2_3:13480442-13480461 | None:intergenic | 35.0% | |
| AGCAAAATTAAAGCATGTGG+GGG | + | chr2_3:13480468-13480487 | None:intergenic | 35.0% | |
| ATATACGTTATGGCAGTAAG+GGG | - | chr2_3:13480613-13480632 | Msa0279480:intron | 35.0% | |
| ACCAAATTGTTGTGCATACT+CGG | + | chr2_3:13480760-13480779 | None:intergenic | 35.0% | |
| !!! | GACCTTTTTAATTTTGGCCT+AGG | - | chr2_3:13480888-13480907 | Msa0279480:intron | 35.0% |
| CTCCTAGGCCAAAATTAAAA+AGG | + | chr2_3:13480893-13480912 | None:intergenic | 35.0% | |
| !!! | CTTTTTAATTTTGGCCTAGG+AGG | - | chr2_3:13480891-13480910 | Msa0279480:intron | 35.0% |
| ! | GAAACGAAACTCGGTGAAAT+TGG | - | chr2_3:13474316-13474335 | Msa0279480:three_prime_UTR | 40.0% |
| GGTGAAATTGGTAAGAGAAG+AGG | - | chr2_3:13474328-13474347 | Msa0279480:three_prime_UTR | 40.0% | |
| GTCTTTGAGTCCAAGTGAAA+AGG | - | chr2_3:13474481-13474500 | Msa0279480:CDS | 40.0% | |
| !! | TTTGTGTTGGATTGGGCTTT+TGG | - | chr2_3:13474706-13474725 | Msa0279480:intron | 40.0% |
| !! | TTGTGTTGGATTGGGCTTTT+GGG | - | chr2_3:13474707-13474726 | Msa0279480:intron | 40.0% |
| TTAATTAGGGGTGGACACAT+GGG | + | chr2_3:13474743-13474762 | None:intergenic | 40.0% | |
| TAAGGGGCAAACCTAATGAT+AGG | + | chr2_3:13474777-13474796 | None:intergenic | 40.0% | |
| AGGTTTGCCCCTTATAAAAG+CGG | - | chr2_3:13474783-13474802 | Msa0279480:intron | 40.0% | |
| ! | ACTTTTGCCAAAATGGTGAG+TGG | + | chr2_3:13474811-13474830 | None:intergenic | 40.0% |
| !! | CCTCACTACTTTTGCCAAAA+TGG | + | chr2_3:13474818-13474837 | None:intergenic | 40.0% |
| !! | CCATTTTGGCAAAAGTAGTG+AGG | - | chr2_3:13474815-13474834 | Msa0279480:intron | 40.0% |
| GGGCAAAATGGTAATTTCCA+TGG | + | chr2_3:13475418-13475437 | None:intergenic | 40.0% | |
| ! | TACCATTTTGCCCTTATGAG+GGG | - | chr2_3:13475425-13475444 | Msa0279480:intron | 40.0% |
| GAGAAAAGAGAGAGAGAAAC+GGG | - | chr2_3:13475597-13475616 | Msa0279480:intron | 40.0% | |
| GGGATTGGATTGAAGATGAT+CGG | - | chr2_3:13475760-13475779 | Msa0279480:intron | 40.0% | |
| ATGAAGATCCGTGTGTTCAA+CGG | + | chr2_3:13475806-13475825 | None:intergenic | 40.0% | |
| TTGAACACACGGATCTTCAT+GGG | - | chr2_3:13475806-13475825 | Msa0279480:intron | 40.0% | |
| ! | GCTAATGTTTGATGGCAGTT+TGG | - | chr2_3:13476056-13476075 | Msa0279480:CDS | 40.0% |
| ! | TGTTTGATGGCAGTTTGGAT+TGG | - | chr2_3:13476061-13476080 | Msa0279480:CDS | 40.0% |
| !!! | GGATTGGTTTTTACGAGTTC+TGG | - | chr2_3:13476077-13476096 | Msa0279480:CDS | 40.0% |
| CCATTATCAACTTGAAGCCT+TGG | + | chr2_3:13476526-13476545 | None:intergenic | 40.0% | |
| !! | CCAAGGCTTCAAGTTGATAA+TGG | - | chr2_3:13476523-13476542 | Msa0279480:intron | 40.0% |
| ! | ACTTTTCTCCCTGTAACCAA+GGG | - | chr2_3:13476674-13476693 | Msa0279480:CDS | 40.0% |
| ! | TCAACTGGTTTCCATTATGC+AGG | - | chr2_3:13476942-13476961 | Msa0279480:intron | 40.0% |
| TATAGTAGCCGAGAAGAACA+AGG | - | chr2_3:13477155-13477174 | Msa0279480:intron | 40.0% | |
| AGAACTTTGTTCCTGCAACA+AGG | - | chr2_3:13477289-13477308 | Msa0279480:intron | 40.0% | |
| GAACTTTGTTCCTGCAACAA+GGG | - | chr2_3:13477290-13477309 | Msa0279480:intron | 40.0% | |
| ! | ACAATAACTTCAGGTTCTGC+AGG | + | chr2_3:13477335-13477354 | None:intergenic | 40.0% |
| ACCGTGTAGAATATCAACTG+AGG | + | chr2_3:13478100-13478119 | None:intergenic | 40.0% | |
| ACTAATCAGTTAGGAAGAGG+GGG | + | chr2_3:13478457-13478476 | None:intergenic | 40.0% | |
| AGCAGAAGCTCTTTAATGGT+TGG | - | chr2_3:13478628-13478647 | Msa0279480:intron | 40.0% | |
| TCTCGTGTAGAGAAACCAAA+TGG | + | chr2_3:13479084-13479103 | None:intergenic | 40.0% | |
| GAATTTGCAGAACCTGTTGA+CGG | - | chr2_3:13479117-13479136 | Msa0279480:intron | 40.0% | |
| AATTTGCAGAACCTGTTGAC+GGG | - | chr2_3:13479118-13479137 | Msa0279480:intron | 40.0% | |
| ACGGTCTATTCCAATAGAAG+TGG | + | chr2_3:13479321-13479340 | None:intergenic | 40.0% | |
| CACAACCATGTAACAAGAGT+CGG | - | chr2_3:13479374-13479393 | Msa0279480:intron | 40.0% | |
| ! | TGCTACTGTCATTAACTTGG+TGG | - | chr2_3:13479818-13479837 | Msa0279480:intron | 40.0% |
| ! | GTCATTAACTTGGTGGCATT+TGG | - | chr2_3:13479825-13479844 | Msa0279480:intron | 40.0% |
| !!! | CGATCTGATGTTTTGGTCTT+TGG | - | chr2_3:13480025-13480044 | Msa0279480:intron | 40.0% |
| ACAAGTTTCCAGTTGAATCC+CGG | - | chr2_3:13480421-13480440 | Msa0279480:intron | 40.0% | |
| TTGTGTAGACTGCCACTATT+TGG | + | chr2_3:13480525-13480544 | None:intergenic | 40.0% | |
| GCTATATCCTTAAGGGACAT+AGG | + | chr2_3:13480702-13480721 | None:intergenic | 40.0% | |
| TCCGAGTATGCACAACAATT+TGG | - | chr2_3:13480756-13480775 | Msa0279480:intron | 40.0% | |
| GAGTATGCACAACAATTTGG+TGG | - | chr2_3:13480759-13480778 | Msa0279480:intron | 40.0% | |
| ! | TATGCACAACAATTTGGTGG+AGG | - | chr2_3:13480762-13480781 | Msa0279480:intron | 40.0% |
| !! | GGAACATTCAGCTCTAAGTA+TGG | - | chr2_3:13480783-13480802 | Msa0279480:intron | 40.0% |
| !! | TCAGCTCTAAGTATGGAGAA+TGG | - | chr2_3:13480790-13480809 | Msa0279480:intron | 40.0% |
| CGCTGTGGAATCTTTCAGTT+CGG | + | chr2_3:13474290-13474309 | None:intergenic | 45.0% | |
| CGAACTGAAAGATTCCACAG+CGG | - | chr2_3:13474288-13474307 | Msa0279480:three_prime_UTR | 45.0% | |
| GGTAAGAGAAGAGGTAACGA+CGG | - | chr2_3:13474337-13474356 | Msa0279480:three_prime_UTR | 45.0% | |
| GTAAGAGAAGAGGTAACGAC+GGG | - | chr2_3:13474338-13474357 | Msa0279480:three_prime_UTR | 45.0% | |
| ! | GCGATCAACACCTTTTCACT+TGG | + | chr2_3:13474494-13474513 | None:intergenic | 45.0% |
| !! | TATGACCCAATTTTGGCCGA+AGG | + | chr2_3:13474671-13474690 | None:intergenic | 45.0% |
| GTTAATTAGGGGTGGACACA+TGG | + | chr2_3:13474744-13474763 | None:intergenic | 45.0% | |
| !!! | AGTGGAGCCGCTTTTATAAG+GGG | + | chr2_3:13474793-13474812 | None:intergenic | 45.0% |
| !!! | GAGTGGAGCCGCTTTTATAA+GGG | + | chr2_3:13474794-13474813 | None:intergenic | 45.0% |
| !!! | TGAGTGGAGCCGCTTTTATA+AGG | + | chr2_3:13474795-13474814 | None:intergenic | 45.0% |
| ! | GACATGCAGCGCTTTTATCA+CGG | - | chr2_3:13474837-13474856 | Msa0279480:CDS | 45.0% |
| TACCCCTCATAAGGGCAAAA+TGG | + | chr2_3:13475430-13475449 | None:intergenic | 45.0% | |
| !!! | TGCCCTTATGAGGGGTATTT+TGG | - | chr2_3:13475433-13475452 | Msa0279480:intron | 45.0% |
| AAATGGGAACGGGAGAAAGA+AGG | - | chr2_3:13475523-13475542 | Msa0279480:intron | 45.0% | |
| AATGGGAACGGGAGAAAGAA+GGG | - | chr2_3:13475524-13475543 | Msa0279480:intron | 45.0% | |
| AGAGAAGGAAAACGGGAGAA+GGG | - | chr2_3:13475553-13475572 | Msa0279480:intron | 45.0% | |
| AGTTCCGGAGAAGAAGTTGT+CGG | - | chr2_3:13475665-13475684 | Msa0279480:intron | 45.0% | |
| ! | AGTACCGGAGAAGAATTCTC+CGG | - | chr2_3:13475733-13475752 | Msa0279480:intron | 45.0% |
| GTTGAACACACGGATCTTCA+TGG | - | chr2_3:13475805-13475824 | Msa0279480:intron | 45.0% | |
| AATGGCCTGTGTCAAGTGAA+TGG | - | chr2_3:13476461-13476480 | Msa0279480:intron | 45.0% | |
| TCAAGTGAATGGTCTCCAGA+TGG | - | chr2_3:13476472-13476491 | Msa0279480:intron | 45.0% | |
| CAAGTGAATGGTCTCCAGAT+GGG | - | chr2_3:13476473-13476492 | Msa0279480:intron | 45.0% | |
| GTCATCAAATAGCACCCATC+TGG | + | chr2_3:13476490-13476509 | None:intergenic | 45.0% | |
| !! | GATGGGTGCTATTTGATGAC+AGG | - | chr2_3:13476490-13476509 | Msa0279480:intron | 45.0% |
| TGACAGGAAACACAACTCCA+AGG | - | chr2_3:13476506-13476525 | Msa0279480:intron | 45.0% | |
| ! | CAACAAAATCAGAGTGCCCA+TGG | + | chr2_3:13476595-13476614 | None:intergenic | 45.0% |
| ! | GACTTTTCTCCCTGTAACCA+AGG | - | chr2_3:13476673-13476692 | Msa0279480:CDS | 45.0% |
| CAGGTGGATATCACCATAGT+AGG | - | chr2_3:13477121-13477140 | Msa0279480:intron | 45.0% | |
| ! | ATGTTTTCCACCCTTGTTGC+AGG | + | chr2_3:13477303-13477322 | None:intergenic | 45.0% |
| !! | GAGTCTGGTGTTACTTATGG+TGG | - | chr2_3:13477577-13477596 | Msa0279480:intron | 45.0% |
| !! | GAGTCTGGTGTTACTTATGG+TGG | - | chr2_3:13477577-13477596 | Msa0279480:intron | 45.0% |
| AGGCTCTGTGAAAGTCGAAA+TGG | + | chr2_3:13477772-13477791 | None:intergenic | 45.0% | |
| ACCTGAAGACGATGACAATG+CGG | + | chr2_3:13477823-13477842 | None:intergenic | 45.0% | |
| AACATCCTCTGATGCAGAGA+GGG | - | chr2_3:13478542-13478561 | Msa0279480:intron | 45.0% | |
| TCTCTACACGAGAGAAGAAG+TGG | - | chr2_3:13479091-13479110 | Msa0279480:intron | 45.0% | |
| ATTTGCAGAACCTGTTGACG+GGG | - | chr2_3:13479119-13479138 | Msa0279480:intron | 45.0% | |
| CTTGAGAGGGATATGAACCA+CGG | - | chr2_3:13479204-13479223 | Msa0279480:intron | 45.0% | |
| TGAACCACGGAGAGGTTATT+TGG | - | chr2_3:13479217-13479236 | Msa0279480:intron | 45.0% | |
| TGTTCCAAATAACCTCTCCG+TGG | + | chr2_3:13479224-13479243 | None:intergenic | 45.0% | |
| GCTGTGATTCCCAATCACAA+CGG | + | chr2_3:13479250-13479269 | None:intergenic | 45.0% | |
| AGTCTCCGACTCTTGTTACA+TGG | + | chr2_3:13479382-13479401 | None:intergenic | 45.0% | |
| TTCAGTGAGTTCACCAACAG+TGG | + | chr2_3:13479564-13479583 | None:intergenic | 45.0% | |
| GTGAACTCACTGAAGCAATG+TGG | - | chr2_3:13479570-13479589 | Msa0279480:intron | 45.0% | |
| TGAAGCAATGTGGCCAATAG+AGG | - | chr2_3:13479580-13479599 | Msa0279480:intron | 45.0% | |
| TAGAGTTTGTGTACTGTGGC+AGG | - | chr2_3:13480056-13480075 | Msa0279480:intron | 45.0% | |
| ! | GCAGGTTAATCATGCCCTTT+TGG | - | chr2_3:13480074-13480093 | Msa0279480:intron | 45.0% |
| AGGCTGAATAGGTGACTGTA+AGG | + | chr2_3:13480349-13480368 | None:intergenic | 45.0% | |
| TTATCTCACCGGGATTCAAC+TGG | + | chr2_3:13480432-13480451 | None:intergenic | 45.0% | |
| GTTGAATCCCGGTGAGATAA+TGG | - | chr2_3:13480432-13480451 | Msa0279480:intron | 45.0% | |
| TTATGGCAGTAAGGGGAATG+AGG | - | chr2_3:13480620-13480639 | Msa0279480:intron | 45.0% | |
| CTCACAACCTATGTCCCTTA+AGG | - | chr2_3:13480692-13480711 | Msa0279480:intron | 45.0% | |
| CTCTAAGTATGGAGAATGGC+AGG | - | chr2_3:13480794-13480813 | Msa0279480:intron | 45.0% | |
| AATGGCAGGAGTTCACATCT+TGG | - | chr2_3:13480808-13480827 | Msa0279480:intron | 45.0% | |
| ATGGCAGGAGTTCACATCTT+GGG | - | chr2_3:13480809-13480828 | Msa0279480:intron | 45.0% | |
| !!! | TTTATAAAATTATTTGAAAT+TGG | - | chr2_3:13478176-13478195 | Msa0279480:intron | 5.0% |
| ! | GGAAGGAAGAAAGAGTGCGA+GGG | - | chr2_3:13474359-13474378 | Msa0279480:three_prime_UTR | 50.0% |
| GGGTCATAGAATGCAATCCG+CGG | - | chr2_3:13474683-13474702 | Msa0279480:intron | 50.0% | |
| ATGCAATCCGCGGTTTGTGT+TGG | - | chr2_3:13474693-13474712 | Msa0279480:intron | 50.0% | |
| ATCCGCGGTTTGTGTTGGAT+TGG | - | chr2_3:13474698-13474717 | Msa0279480:intron | 50.0% | |
| TCCGCGGTTTGTGTTGGATT+GGG | - | chr2_3:13474699-13474718 | Msa0279480:intron | 50.0% | |
| AGGGGAGAGAGAAATGGGAA+CGG | - | chr2_3:13475512-13475531 | Msa0279480:intron | 50.0% | |
| ATGGGAACGGGAGAAAGAAG+GGG | - | chr2_3:13475525-13475544 | Msa0279480:intron | 50.0% | |
| GAGAGAAGGAAAACGGGAGA+AGG | - | chr2_3:13475552-13475571 | Msa0279480:intron | 50.0% | |
| ! | CTTTTCTCTCTCGTCCTCGA+CGG | + | chr2_3:13475585-13475604 | None:intergenic | 50.0% |
| AAACGGGAACGAGAGAGAGA+CGG | - | chr2_3:13475613-13475632 | Msa0279480:intron | 50.0% | |
| AGTACCTGAGAAGAAGTCGC+CGG | - | chr2_3:13475699-13475718 | Msa0279480:intron | 50.0% | |
| TGTCTCTGCCGTTGAACACA+CGG | - | chr2_3:13475795-13475814 | Msa0279480:intron | 50.0% | |
| AACACACGGATCTTCATGGG+AGG | - | chr2_3:13475809-13475828 | Msa0279480:intron | 50.0% | |
| GGAGACCATTCACTTGACAC+AGG | + | chr2_3:13476469-13476488 | None:intergenic | 50.0% | |
| !! | AAATAGTGGACCTGCACCAG+AGG | - | chr2_3:13476990-13477009 | Msa0279480:intron | 50.0% |
| !! | AATAGTGGACCTGCACCAGA+GGG | - | chr2_3:13476991-13477010 | Msa0279480:intron | 50.0% |
| ! | TTGGTAATTCCCTCTGGTGC+AGG | + | chr2_3:13477003-13477022 | None:intergenic | 50.0% |
| CAGGTCGTGAGCAGAACATT+TGG | + | chr2_3:13477081-13477100 | None:intergenic | 50.0% | |
| CAAATGTTCTGCTCACGACC+TGG | - | chr2_3:13477079-13477098 | Msa0279480:intron | 50.0% | |
| CTTTGTTCCTGCAACAAGGG+TGG | - | chr2_3:13477293-13477312 | Msa0279480:intron | 50.0% | |
| TCCGCATTGTCATCGTCTTC+AGG | - | chr2_3:13477819-13477838 | Msa0279480:intron | 50.0% | |
| ! | TGCAAACATGGCTCTGCCTT+AGG | - | chr2_3:13478153-13478172 | Msa0279480:intron | 50.0% |
| AATCAGTTAGGAAGAGGGGG+TGG | + | chr2_3:13478454-13478473 | None:intergenic | 50.0% | |
| GAACATCCTCTGATGCAGAG+AGG | - | chr2_3:13478541-13478560 | Msa0279480:intron | 50.0% | |
| ! | TCAGTTGATTCCCCGTCAAC+AGG | + | chr2_3:13479132-13479151 | None:intergenic | 50.0% |
| TGGAACACTGCCGTTGTGAT+TGG | - | chr2_3:13479237-13479256 | Msa0279480:intron | 50.0% | |
| GGAACACTGCCGTTGTGATT+GGG | - | chr2_3:13479238-13479257 | Msa0279480:intron | 50.0% | |
| ! | TTCAACCCTTGTGCCACTGT+TGG | - | chr2_3:13479548-13479567 | Msa0279480:CDS | 50.0% |
| GTTCACCAACAGTGGCACAA+GGG | + | chr2_3:13479556-13479575 | None:intergenic | 50.0% | |
| AGTTCACCAACAGTGGCACA+AGG | + | chr2_3:13479557-13479576 | None:intergenic | 50.0% | |
| !! | AAAGATGGGCTGAGAGACAC+AGG | + | chr2_3:13480231-13480250 | None:intergenic | 50.0% |
| ACTTGTGATCCTACTGCTCG+CGG | - | chr2_3:13480726-13480745 | Msa0279480:intron | 50.0% | |
| GAAATAACACCGCGAGCAGT+AGG | + | chr2_3:13480738-13480757 | None:intergenic | 50.0% | |
| GAGAAGAGGTAACGACGGGA+AGG | - | chr2_3:13474342-13474361 | Msa0279480:three_prime_UTR | 55.0% | |
| ! | GGGAAGGAAGAAAGAGTGCG+AGG | - | chr2_3:13474358-13474377 | Msa0279480:three_prime_UTR | 55.0% |
| GCCCAATCCAACACAAACCG+CGG | + | chr2_3:13474703-13474722 | None:intergenic | 55.0% | |
| TTAGGGGTGGACACATGGGT+GGG | + | chr2_3:13474739-13474758 | None:intergenic | 55.0% | |
| ATTAGGGGTGGACACATGGG+TGG | + | chr2_3:13474740-13474759 | None:intergenic | 55.0% | |
| ! | AGCGGCTCCACTCACCATTT+TGG | - | chr2_3:13474801-13474820 | Msa0279480:intron | 55.0% |
| GGGGAGAGAGAAATGGGAAC+GGG | - | chr2_3:13475513-13475532 | Msa0279480:intron | 55.0% | |
| TGGGAACGGGAGAAAGAAGG+GGG | - | chr2_3:13475526-13475545 | Msa0279480:intron | 55.0% | |
| AAAGAAGGGGGGACGAGAGA+AGG | - | chr2_3:13475538-13475557 | Msa0279480:intron | 55.0% | |
| GGGGGACGAGAGAAGGAAAA+CGG | - | chr2_3:13475545-13475564 | Msa0279480:intron | 55.0% | |
| GGGGACGAGAGAAGGAAAAC+GGG | - | chr2_3:13475546-13475565 | Msa0279480:intron | 55.0% | |
| AACGGGAACGAGAGAGAGAC+GGG | - | chr2_3:13475614-13475633 | Msa0279480:intron | 55.0% | |
| TCGAGGGAGAGAGAGAGAGA+GGG | - | chr2_3:13475638-13475657 | Msa0279480:intron | 55.0% | |
| TCCGGAGAAGAAGTTGTCGG+CGG | - | chr2_3:13475668-13475687 | Msa0279480:intron | 55.0% | |
| ACCGCCGACAACTTCTTCTC+CGG | + | chr2_3:13475672-13475691 | None:intergenic | 55.0% | |
| GAGAAGAAGTTGTCGGCGGT+GGG | - | chr2_3:13475672-13475691 | Msa0279480:intron | 55.0% | |
| ACCGGAGAAGAATTCTCCGG+CGG | - | chr2_3:13475736-13475755 | Msa0279480:intron | 55.0% | |
| ACCGCCGGAGAATTCTTCTC+CGG | + | chr2_3:13475740-13475759 | None:intergenic | 55.0% | |
| GAGAAGAATTCTCCGGCGGT+GGG | - | chr2_3:13475740-13475759 | Msa0279480:intron | 55.0% | |
| CTTCAATCCAATCCCACCGC+CGG | + | chr2_3:13475755-13475774 | None:intergenic | 55.0% | |
| CAATGCCCTCTCTGCATCAG+AGG | + | chr2_3:13478550-13478569 | None:intergenic | 55.0% | |
| ! | CTCTGATGCAGAGAGGGCAT+TGG | - | chr2_3:13478548-13478567 | Msa0279480:intron | 55.0% |
| GAGGGATATGAACCACGGAG+AGG | - | chr2_3:13479209-13479228 | Msa0279480:intron | 55.0% | |
| ! | CTGCTGCTGAGTGGGTTCAT+GGG | - | chr2_3:13480181-13480200 | Msa0279480:intron | 55.0% |
| AGCAAGCGCAGAGGCTGAAT+AGG | + | chr2_3:13480360-13480379 | None:intergenic | 55.0% | |
| TATTCAGCCTCTGCGCTTGC+TGG | - | chr2_3:13480359-13480378 | Msa0279480:intron | 55.0% | |
| GAAAGATTCCACAGCGGCGC+TGG | - | chr2_3:13474294-13474313 | Msa0279480:three_prime_UTR | 60.0% | |
| TTTCGTTTCCAGCGCCGCTG+TGG | + | chr2_3:13474305-13474324 | None:intergenic | 60.0% | |
| ! | GCGGCGCTGGAAACGAAACT+CGG | - | chr2_3:13474307-13474326 | Msa0279480:three_prime_UTR | 60.0% |
| GGGAACGGGAGAAAGAAGGG+GGG | - | chr2_3:13475527-13475546 | Msa0279480:intron | 60.0% | |
| TTCTCTCTCGTCCTCGACGG+CGG | + | chr2_3:13475582-13475601 | None:intergenic | 60.0% | |
| ACGGGAACGAGAGAGAGACG+GGG | - | chr2_3:13475615-13475634 | Msa0279480:intron | 60.0% | |
| GTCGAGGGAGAGAGAGAGAG+AGG | - | chr2_3:13475637-13475656 | Msa0279480:intron | 60.0% | |
| AGGGAGAGAGAGAGAGAGGG+AGG | - | chr2_3:13475641-13475660 | Msa0279480:intron | 60.0% | |
| GGGAGAGAGAGAGAGAGGGA+GGG | - | chr2_3:13475642-13475661 | Msa0279480:intron | 60.0% | |
| GAGAGAGAGGGAGGGAGTTC+CGG | - | chr2_3:13475650-13475669 | Msa0279480:intron | 60.0% | |
| GGAGAAGAAGTTGTCGGCGG+TGG | - | chr2_3:13475671-13475690 | Msa0279480:intron | 60.0% | |
| AAGAAGTTGTCGGCGGTGGG+AGG | - | chr2_3:13475675-13475694 | Msa0279480:intron | 60.0% | |
| AGAAGTTGTCGGCGGTGGGA+GGG | - | chr2_3:13475676-13475695 | Msa0279480:intron | 60.0% | |
| ACCTGAGAAGAAGTCGCCGG+CGG | - | chr2_3:13475702-13475721 | Msa0279480:intron | 60.0% | |
| GGAGAAGAATTCTCCGGCGG+TGG | - | chr2_3:13475739-13475758 | Msa0279480:intron | 60.0% | |
| GAATTCTCCGGCGGTGGGAT+TGG | - | chr2_3:13475745-13475764 | Msa0279480:intron | 60.0% | |
| GTTCAACGGCAGAGACAGCG+AGG | + | chr2_3:13475792-13475811 | None:intergenic | 60.0% | |
| AACCCACTCAGCAGCAGCAG+CGG | + | chr2_3:13480178-13480197 | None:intergenic | 60.0% | |
| ! | GCTGCTGCTGAGTGGGTTCA+TGG | - | chr2_3:13480180-13480199 | Msa0279480:intron | 60.0% |
| ACGAGAGAGAGACGGGGTCG+AGG | - | chr2_3:13475621-13475640 | Msa0279480:intron | 65.0% | |
| CGAGAGAGAGACGGGGTCGA+GGG | - | chr2_3:13475622-13475641 | Msa0279480:intron | 65.0% | |
| ACCGCCGGCGACTTCTTCTC+AGG | + | chr2_3:13475706-13475725 | None:intergenic | 65.0% | |
| TGAGAAGAAGTCGCCGGCGG+TGG | - | chr2_3:13475705-13475724 | Msa0279480:intron | 65.0% | |
| GAGAAGAAGTCGCCGGCGGT+GGG | - | chr2_3:13475706-13475725 | Msa0279480:intron | 65.0% | |
| AGCCGCTGCTGCTGCTGAGT+GGG | - | chr2_3:13480173-13480192 | Msa0279480:intron | 65.0% | |
| GGAGGAACCAGCAAGCGCAG+AGG | + | chr2_3:13480369-13480388 | None:intergenic | 65.0% | |
| AAGAAGTCGCCGGCGGTGGG+AGG | - | chr2_3:13475709-13475728 | Msa0279480:intron | 70.0% | |
| AGAAGTCGCCGGCGGTGGGA+GGG | - | chr2_3:13475710-13475729 | Msa0279480:intron | 70.0% | |
| CAGCCGCTGCTGCTGCTGAG+TGG | - | chr2_3:13480172-13480191 | Msa0279480:intron | 70.0% | |
| GAGAAGGGTCGCCGCCGTCG+AGG | - | chr2_3:13475568-13475587 | Msa0279480:intron | 75.0% | |
| CCGGTACTCCCTCCCACCGC+CGG | + | chr2_3:13475721-13475740 | None:intergenic | 75.0% | |
| ! | CCGGCGGTGGGAGGGAGTAC+CGG | - | chr2_3:13475718-13475737 | Msa0279480:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 13474250 | 13481027 | 13474250 | ID=Msa0279480;Name=Msa0279480 |
| chr2_3 | mRNA | 13474250 | 13481027 | 13474250 | ID=Msa0279480-mRNA-1;Parent=Msa0279480;Name=Msa0279480-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0.46|0.35|0.85|0.76|0.71|14|176|524 |
| chr2_3 | exon | 13474250 | 13474648 | 13474250 | ID=Msa0279480-mRNA-1:exon:5748;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13474835 | 13474923 | 13474835 | ID=Msa0279480-mRNA-1:exon:5747;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13475002 | 13475199 | 13475002 | ID=Msa0279480-mRNA-1:exon:5746;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13475984 | 13476150 | 13475984 | ID=Msa0279480-mRNA-1:exon:5745;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13476632 | 13476782 | 13476632 | ID=Msa0279480-mRNA-1:exon:5744;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13477160 | 13477223 | 13477160 | ID=Msa0279480-mRNA-1:exon:5743;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13477437 | 13477556 | 13477437 | ID=Msa0279480-mRNA-1:exon:5742;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13477931 | 13477986 | 13477931 | ID=Msa0279480-mRNA-1:exon:5741;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13478101 | 13478153 | 13478101 | ID=Msa0279480-mRNA-1:exon:5740;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13478222 | 13478313 | 13478222 | ID=Msa0279480-mRNA-1:exon:5739;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13478732 | 13478851 | 13478732 | ID=Msa0279480-mRNA-1:exon:5738;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13479447 | 13479580 | 13479447 | ID=Msa0279480-mRNA-1:exon:5737;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13480270 | 13480277 | 13480270 | ID=Msa0279480-mRNA-1:exon:5736;Parent=Msa0279480-mRNA-1 |
| chr2_3 | exon | 13480928 | 13481027 | 13480928 | ID=Msa0279480-mRNA-1:exon:5735;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13480928 | 13481027 | 13480928 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13480270 | 13480277 | 13480270 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13479447 | 13479580 | 13479447 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13478732 | 13478851 | 13478732 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13478222 | 13478313 | 13478222 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13478101 | 13478153 | 13478101 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13477931 | 13477986 | 13477931 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13477437 | 13477556 | 13477437 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13477160 | 13477223 | 13477160 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13476632 | 13476782 | 13476632 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13475984 | 13476150 | 13475984 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13475002 | 13475199 | 13475002 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13474835 | 13474923 | 13474835 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | CDS | 13474426 | 13474648 | 13474426 | ID=Msa0279480-mRNA-1:cds;Parent=Msa0279480-mRNA-1 |
| chr2_3 | three_prime_UTR | 13474250 | 13474425 | 13474250 | ID=Msa0279480-mRNA-1:three_prime_utr;Parent=Msa0279480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
