AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0124570

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0124570 MtrunA17_Chr1g0185801 89.660 1441 52 6 1 1426 1 1359 0.0 2531
Msa0124570 MtrunA17_Chr7g0259601 47.224 1423 572 39 1 1361 1 1306 0.0 937
Msa0124570 MtrunA17_Chr7g0259601 52.632 76 29 1 1351 1426 1376 1444 1.02e-18 93.2
Msa0124570 MtrunA17_Chr1g0164231 45.357 280 122 6 890 1142 1023 1298 3.25e-52 202
Msa0124570 MtrunA17_Chr1g0164231 29.091 330 114 9 1 263 1 277 2.98e-21 101
Msa0124570 MtrunA17_Chr4g0038231 43.465 329 150 5 835 1128 730 1057 4.47e-52 201
Msa0124570 MtrunA17_Chr4g0038231 33.951 162 59 3 1 161 1 115 1.10e-18 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0124570 AT3G63070.1 37.846 650 312 20 804 1426 763 1347 1.24e-96 341
Msa0124570 AT3G63070.1 40.180 555 230 19 1 517 1 491 4.02e-61 231
Msa0124570 AT2G48160.2 43.707 437 183 16 753 1151 704 1115 1.87e-79 289
Msa0124570 AT2G48160.2 39.338 544 245 15 1 517 1 486 3.17e-68 254
Msa0124570 AT2G48160.1 43.707 437 183 16 753 1151 704 1115 1.90e-79 289
Msa0124570 AT2G48160.1 39.338 544 245 15 1 517 1 486 3.41e-68 253
Msa0124570 AT5G23150.1 46.006 313 132 9 856 1138 726 1031 1.12e-56 217
Msa0124570 AT5G23150.1 37.576 165 52 5 1 161 1 118 2.72e-19 95.5
Msa0124570 AT5G23150.3 46.006 313 132 9 856 1138 726 1031 1.12e-56 217
Msa0124570 AT5G23150.3 37.576 165 52 5 1 161 1 118 2.72e-19 95.5
Msa0124570 AT5G23150.2 46.006 313 132 9 856 1138 726 1031 1.15e-56 216
Msa0124570 AT5G23150.2 37.576 165 52 5 1 161 1 118 2.98e-19 95.1
Msa0124570 AT5G08230.1 43.333 270 119 6 890 1128 827 1093 8.01e-48 188
Msa0124570 AT5G08230.1 34.270 178 64 6 1 176 1 127 5.31e-17 87.8

Find 470 sgRNAs with CRISPR-Local

Find 1168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAATAAATTATAGAATT+TGG 0.105022 1_3:+52431900 None:intergenic
ATAATATTGCCTTCAATATT+TGG 0.137883 1_3:+52439530 None:intergenic
CCTGGGCTGCATTGGTTAAT+TGG 0.143753 1_3:+52440788 None:intergenic
CTAGTTCTTGCTAAAGTTAA+AGG 0.159531 1_3:-52446723 Msa0124570:CDS
TTGGTTGCCCTCTTCCTATT+TGG 0.161072 1_3:+52440484 None:intergenic
GTTCTCCTGTGCAGCATTTC+CGG 0.173138 1_3:+52434083 None:intergenic
CGGAATTTCTGCAAATGTTC+TGG 0.182568 1_3:+52440395 None:intergenic
ATACCCTCCATTTCTCTTAT+AGG 0.184982 1_3:+52433790 None:intergenic
TTGTTCAGCTCAACTTCTTC+AGG 0.207853 1_3:+52440556 None:intergenic
ACATTGTTTGCCTGGGTATT+TGG 0.208793 1_3:-52431760 Msa0124570:three_prime_UTR
GGAGGTGGTGGTGGAGGTGG+AGG 0.210470 1_3:+52433317 None:intergenic
GGTGGAGGTGGTGGTGGAGG+TGG 0.225391 1_3:+52433314 None:intergenic
GGTGGTGGTGGAGGTGGTGG+TGG 0.231755 1_3:+52433308 None:intergenic
GGTGGAGGAGGTGGTGGTGG+TGG 0.236468 1_3:+52433296 None:intergenic
CGCTAGCTCTGTCTCTTTGC+TGG 0.238689 1_3:+52444138 None:intergenic
CTTTGTTTAGGAGGTGTTTA+TGG 0.241268 1_3:-52432121 Msa0124570:three_prime_UTR
GACCAGATAAAGTTTGTTTC+TGG 0.244152 1_3:+52438739 None:intergenic
TACCCTCCATTTCTCTTATA+GGG 0.249484 1_3:+52433791 None:intergenic
GGAGGTGGTGGTGGTGGAGG+TGG 0.254756 1_3:+52433302 None:intergenic
GGTGGTGGTGGTGGAGGTGG+TGG 0.258082 1_3:+52433305 None:intergenic
GGAGGAGGTGGTGGTGGTGG+AGG 0.259243 1_3:+52433299 None:intergenic
GGTGGAGGTGGAGGGGCTAA+TGG 0.262775 1_3:+52433326 None:intergenic
GGCAGGCGACATGGGGAAAT+TGG 0.263763 1_3:-52444083 Msa0124570:CDS
CACCAGAAACAAACTTTATC+TGG 0.265155 1_3:-52438741 Msa0124570:CDS
ACGCCTTCACCGTGCTTTAG+AGG 0.267616 1_3:-52440026 Msa0124570:CDS
AGGCCTTGATCTTAAAATAA+AGG 0.270326 1_3:-52440533 Msa0124570:CDS
GCATGTCAGGTCCAGGCTTT+TGG 0.272239 1_3:-52432289 Msa0124570:intron
GTACTGATCTAAATTCTATA+AGG 0.273364 1_3:+52431871 None:intergenic
GGTGGTGGAGGTGGTGGTGG+AGG 0.273646 1_3:+52433311 None:intergenic
TGTGCATTACCTCAAGCTTC+TGG 0.274877 1_3:+52431579 None:intergenic
TTAATCTTTCGTGATTATTA+TGG 0.275503 1_3:+52432730 None:intergenic
TGGTTGCCCTCTTCCTATTT+GGG 0.281847 1_3:+52440485 None:intergenic
AAGGCATTGAATTGAGATTA+TGG 0.283242 1_3:+52446929 None:intergenic
CTGGGTCAAAAGGCTGTTTC+GGG 0.289716 1_3:-52438906 Msa0124570:CDS
TGTTTCAACATCTGACTGTC+TGG 0.290909 1_3:-52438925 Msa0124570:CDS
CACCCGTGATCTGGTATTCT+AGG 0.306923 1_3:+52432501 None:intergenic
TGATTCAGTTTCAAGATTAT+CGG 0.307560 1_3:+52434361 None:intergenic
TTTGAGGCGGATCAATATTA+GGG 0.309291 1_3:+52439411 None:intergenic
TTCTCCTGTGCAGCATTTCC+GGG 0.318601 1_3:+52434084 None:intergenic
TCTTCAAAGGGTGGTCTAAA+TGG 0.319299 1_3:+52432438 None:intergenic
GAGAGAGATAGATATGAGTT+TGG 0.321015 1_3:+52447065 None:intergenic
ATGTGTGCTTCCCTATATTC+TGG 0.321948 1_3:+52432996 None:intergenic
TTCAGGGCATTCACTAGTTT+CGG 0.323438 1_3:+52440573 None:intergenic
TTAGAAGGAATAAACGTCTT+AGG 0.328537 1_3:-52440756 Msa0124570:CDS
GTCATTACATGGAAACATAA+AGG 0.330567 1_3:+52440831 None:intergenic
TCCCTTCAATTAACAATTCC+AGG 0.331779 1_3:+52431818 None:intergenic
CCTGAACTCTGGCTTTGTTT+AGG 0.332375 1_3:-52432133 Msa0124570:three_prime_UTR
GCTATTGACTGTGCAAAGTT+TGG 0.334113 1_3:-52438561 Msa0124570:CDS
GGTGTAACCTTAACTTATTT+AGG 0.336516 1_3:-52431944 Msa0124570:three_prime_UTR
GGTGGTGGAGGAGGTGGTGG+TGG 0.338834 1_3:+52433293 None:intergenic
CCATCATGCCCCAGAATATA+GGG 0.339549 1_3:-52433006 Msa0124570:CDS
GGTGGTGGTGGAGGAGGTGG+TGG 0.339924 1_3:+52433290 None:intergenic
TCTGGGTCAAAAGGCTGTTT+CGG 0.341197 1_3:-52438907 Msa0124570:CDS
ATGATAGAGGGCACTCTATA+AGG 0.344824 1_3:-52432893 Msa0124570:CDS
AGGTGGTGGTGGAGGTGGAG+GGG 0.351396 1_3:+52433319 None:intergenic
GGAGGTGGAGGGGCTAATGG+TGG 0.356226 1_3:+52433329 None:intergenic
ACATTTCAGTGAATATTTCC+TGG 0.358016 1_3:-52431836 Msa0124570:three_prime_UTR
TCAGAATGTCGATAATTTAC+TGG 0.359124 1_3:+52432930 None:intergenic
TGAAGGAGAAACATTATTCA+TGG 0.362082 1_3:+52440147 None:intergenic
TCGGAATTTGAAGATTTCAT+AGG 0.362435 1_3:+52441093 None:intergenic
GGCGGTGGTGGTGGAGGAGG+TGG 0.362887 1_3:+52433287 None:intergenic
TCCATTGTGCTCTGATGTAT+TGG 0.366720 1_3:+52439481 None:intergenic
GGTATGCATGTTGACGAATA+TGG 0.368248 1_3:-52433772 Msa0124570:CDS
CATTATTCATGGTGCCAATC+AGG 0.370668 1_3:+52440158 None:intergenic
TCGTAGTTGGTGTGTTCAAC+TGG 0.370839 1_3:-52431612 Msa0124570:three_prime_UTR
CCGCTGCCGCCGCTCGTCAA+TGG 0.370854 1_3:-52446758 Msa0124570:CDS
GTGCGGAGAAAACCCTAATT+TGG 0.372279 1_3:+52446976 None:intergenic
GGTGGAGGGGCTAATGGTGG+TGG 0.373453 1_3:+52433332 None:intergenic
GGAATTTCTGCAAATGTTCT+GGG 0.379796 1_3:+52440396 None:intergenic
TCTCCCATACATTGTTTGCC+TGG 0.380391 1_3:-52431768 Msa0124570:three_prime_UTR
TCTTGCCAGTTTCTTGTGGC+TGG 0.380776 1_3:+52439723 None:intergenic
GAGGTGGTGGTGGAGGTGGA+GGG 0.382313 1_3:+52433318 None:intergenic
ATAGGCGGTGGTGGTGGAGG+AGG 0.383780 1_3:+52433284 None:intergenic
AGAAGAAAAGAAACCCAAAT+AGG 0.385245 1_3:-52440498 Msa0124570:CDS
GGCTCAAACATCTAAAGAAT+TGG 0.385594 1_3:+52431696 None:intergenic
AATGAACCTCTGTTTGTAAC+TGG 0.386152 1_3:+52432408 None:intergenic
GGCCTTGATCTTAAAATAAA+GGG 0.387368 1_3:-52440532 Msa0124570:CDS
TACTGATCTAAATTCTATAA+GGG 0.387424 1_3:+52431872 None:intergenic
GACACAACCTAAATAAGTTA+AGG 0.388262 1_3:+52431937 None:intergenic
TAATTTACTGGATGCGGTAC+AGG 0.392503 1_3:+52432942 None:intergenic
ATTCCAATCTTACCGGGATA+AGG 0.393753 1_3:+52432663 None:intergenic
ACCATCATGCCCCAGAATAT+AGG 0.395779 1_3:-52433007 Msa0124570:CDS
CAACCCATGGCTATCAATAT+CGG 0.396646 1_3:+52441074 None:intergenic
AGTTTCTTGTGGCTGGAACC+TGG 0.396716 1_3:+52439730 None:intergenic
CTCCACGAAATGTTGCCTAT+TGG 0.401464 1_3:+52432776 None:intergenic
CCCAGGGTGCATCTGTTAGA+AGG 0.403916 1_3:-52440771 Msa0124570:CDS
CACCTGGGCCGCCAAAAGCC+TGG 0.404703 1_3:+52432278 None:intergenic
GCACGGTGAAGGCGTTTAGA+TGG 0.407287 1_3:+52440034 None:intergenic
TTTCGAGAAGAGTAAGTTAG+TGG 0.409419 1_3:+52440943 None:intergenic
ACATTGCAAATTGACGTGTT+TGG 0.409640 1_3:+52438825 None:intergenic
ATACCCAGGCAAACAATGTA+TGG 0.410169 1_3:+52431764 None:intergenic
ATGGGAGAATACAGTTGAAT+TGG 0.410432 1_3:+52431783 None:intergenic
AGGTTCCAGCCACAAGAAAC+TGG 0.412230 1_3:-52439728 Msa0124570:CDS
GATCCTTGGTTACTATCACC+TGG 0.413014 1_3:+52432262 None:intergenic
CCCTATATTCTGGGGCATGA+TGG 0.413337 1_3:+52433006 None:intergenic
ATCTGACTGTCTGGGTCAAA+AGG 0.415246 1_3:-52438916 Msa0124570:CDS
AAAGCATACTTACATTTGTT+GGG 0.415504 1_3:+52445336 None:intergenic
GTTACCGTGGCAGGCCATGC+AGG 0.416356 1_3:+52446696 None:intergenic
AAGAATTGGCAACCACTAAC+AGG 0.416614 1_3:+52431710 None:intergenic
TGTTCAGCTCAACTTCTTCA+GGG 0.417706 1_3:+52440557 None:intergenic
CTCCAATAGGCAACATTTCG+TGG 0.419150 1_3:-52432778 Msa0124570:CDS
TGATAAACACAGGCATATCT+TGG 0.419842 1_3:-52433516 Msa0124570:CDS
ATTAAGAACAGAGAGGGCTT+TGG 0.420546 1_3:-52433818 Msa0124570:CDS
AATGTTCTGGGAACTTTGAC+TGG 0.422408 1_3:+52440408 None:intergenic
TTCCTGGAATTGTTAATTGA+AGG 0.425516 1_3:-52431820 Msa0124570:three_prime_UTR
CTCCCATACATTGTTTGCCT+GGG 0.426501 1_3:-52431767 Msa0124570:three_prime_UTR
TGCATTCAGGCAGGCGACAT+GGG 0.426689 1_3:-52444091 Msa0124570:CDS
AAAAGCATACTTACATTTGT+TGG 0.427871 1_3:+52445335 None:intergenic
AAAAGGCTGTTTCGGGCATT+CGG 0.428522 1_3:-52438899 Msa0124570:CDS
AAATAGTCTAGCCTGCATTC+AGG 0.429950 1_3:-52444104 Msa0124570:CDS
GGTTGGCTTGGAAGTATCAT+TGG 0.432449 1_3:+52440465 None:intergenic
GCAGCCAAGGGCTGATCCAT+AGG 0.432636 1_3:+52433065 None:intergenic
GAAGATATGCCTTCCCCATA+TGG 0.432650 1_3:-52432543 Msa0124570:CDS
CCATTGACGAGCGGCGGCAG+CGG 0.433024 1_3:+52446758 None:intergenic
TCACATGGATGACACCCATA+TGG 0.433231 1_3:+52432528 None:intergenic
GGCATAGGCGGTGGTGGTGG+AGG 0.433861 1_3:+52433281 None:intergenic
CACCTCCTCCTTACTCCAAT+AGG 0.434418 1_3:-52432791 Msa0124570:CDS
CAATATTTGGTGGTAATGAC+AGG 0.435744 1_3:+52439543 None:intergenic
AGGAAATCACCTGATCTTGC+TGG 0.437702 1_3:-52440736 Msa0124570:CDS
CATCTCTCTCGATAATCATA+TGG 0.438712 1_3:+52432699 None:intergenic
CCAATTAACCAATGCAGCCC+AGG 0.439737 1_3:-52440788 Msa0124570:CDS
GCCTATTCTCTGCAGAATGC+AGG 0.440229 1_3:-52431996 Msa0124570:three_prime_UTR
AAAGTTTGGCATTGCAGATA+AGG 0.440693 1_3:-52438547 Msa0124570:intron
GTACATGCAGGACTCCTTTG+AGG 0.442318 1_3:-52432087 Msa0124570:three_prime_UTR
GTGCATTACCTCAAGCTTCT+GGG 0.443898 1_3:+52431580 None:intergenic
TCTTCATCTTTAAGCATTCG+AGG 0.444143 1_3:+52433629 None:intergenic
AGGTTCCTCCTCAACTCTAA+TGG 0.444405 1_3:+52440444 None:intergenic
TCATCTGCTTTGGTCTTGAA+TGG 0.445397 1_3:-52440697 Msa0124570:CDS
CTGCATTCAGGCAGGCGACA+TGG 0.445871 1_3:-52444092 Msa0124570:CDS
AGAGCCTCCATTCTCACAAT+TGG 0.445997 1_3:+52440201 None:intergenic
TCCTGGAATTGTTAATTGAA+GGG 0.447170 1_3:-52431819 Msa0124570:three_prime_UTR
TTCTTTCCACTGTCATTACA+TGG 0.447382 1_3:+52440820 None:intergenic
GAAGATTTCATAGGTAAAGT+AGG 0.449044 1_3:+52441102 None:intergenic
GGAAATCTCCACCCGTGATC+TGG 0.449327 1_3:+52432492 None:intergenic
TGGTGCACTGCATTACTAAT+AGG 0.450488 1_3:+52433026 None:intergenic
GAACCGTAGGCAATGTCTTA+AGG 0.451378 1_3:-52434064 Msa0124570:CDS
TTCTGGTGCAAATGTACATC+AGG 0.454314 1_3:+52438756 None:intergenic
CCTGTCGATGAAAGTAAGTA+TGG 0.455254 1_3:-52438717 Msa0124570:CDS
CATGGTGTACAATTCTTTGA+AGG 0.456232 1_3:+52440130 None:intergenic
AACTCAACAATCAAGATCAA+TGG 0.456432 1_3:-52438685 Msa0124570:CDS
AGATGCACCCTGGGCTGCAT+TGG 0.456592 1_3:+52440780 None:intergenic
GAATGTTGCTTCTGTACATT+CGG 0.456633 1_3:-52440971 Msa0124570:CDS
CTCAACTCTAATGGTTGGCT+TGG 0.459328 1_3:+52440453 None:intergenic
GGATGACCCTATAAGAGAAA+TGG 0.459730 1_3:-52433797 Msa0124570:CDS
CTGAAATATATAATCGTAGT+TGG 0.461283 1_3:-52431625 Msa0124570:three_prime_UTR
ACAGTGGTTTGATATGCTTT+CGG 0.461473 1_3:-52431651 Msa0124570:three_prime_UTR
TGTGGAGGGGCGGATGGCAG+AGG 0.463219 1_3:+52433380 None:intergenic
GGTCAGTGAGCCGGAGAAGT+GGG 0.463783 1_3:-52445404 Msa0124570:CDS
GGAGGAAGCCGACGCCGCTA+TGG 0.465520 1_3:+52446825 None:intergenic
CCCTGCATTCTGCAGAGAAT+AGG 0.465798 1_3:+52431995 None:intergenic
TCATTACATGGAAACATAAA+GGG 0.465818 1_3:+52440832 None:intergenic
GCTACTCCTCGGTGCAGCCA+AGG 0.466363 1_3:+52433052 None:intergenic
GAGCTTCTATTCTTTCGTAC+TGG 0.466572 1_3:+52440868 None:intergenic
CGCTGCTGACTTATCCCCAC+AGG 0.466632 1_3:-52440914 Msa0124570:CDS
TGTGTGCTTCCCTATATTCT+GGG 0.467394 1_3:+52432997 None:intergenic
AACTGTGTTGAATTTGCCTA+TGG 0.468597 1_3:+52446900 None:intergenic
CTGTGTGCATGGCCTGTTAG+TGG 0.468793 1_3:-52431722 Msa0124570:three_prime_UTR
CACATGGATGACACCCATAT+GGG 0.470548 1_3:+52432529 None:intergenic
TGATCATTAATAGCCACATC+TGG 0.470905 1_3:+52439899 None:intergenic
CGACATGGGGAAATTGGATC+TGG 0.472659 1_3:-52444077 Msa0124570:CDS
TGTGGCATAGGCGGTGGTGG+TGG 0.473825 1_3:+52433278 None:intergenic
TGAATAGCAGTTACCGTGGC+AGG 0.473918 1_3:+52446687 None:intergenic
TTATCTGCTGCCGTGCCTCC+CGG 0.474838 1_3:-52434102 Msa0124570:CDS
TTGACGAGCGGCGGCAGCGG+CGG 0.474940 1_3:+52446761 None:intergenic
TCCTCCTCAACTCTAATGGT+TGG 0.476591 1_3:+52440448 None:intergenic
TTATTCTCTGTTGAAATCAT+CGG 0.478656 1_3:+52439782 None:intergenic
AACTCAAGTTTGCAGTTACC+TGG 0.478735 1_3:-52433662 Msa0124570:CDS
CCTAAACAAAGCCAGAGTTC+AGG 0.484807 1_3:+52432133 None:intergenic
TTGCTCAAAGCATCTCTCTT+CGG 0.485277 1_3:+52440375 None:intergenic
AATAGCATTCTACATACTCC+AGG 0.486157 1_3:-52440274 Msa0124570:CDS
AGCTGATGTGGAGGGGCGGA+TGG 0.486462 1_3:+52433374 None:intergenic
GAGAGATGCTTTGAGCAAGA+TGG 0.487814 1_3:-52440370 Msa0124570:CDS
CAAACGGCTGCAAAGGATGA+AGG 0.488279 1_3:+52431503 None:intergenic
TGATGGCGAACCATGGGCTC+TGG 0.489068 1_3:+52433898 None:intergenic
CAAGTCCATCCCTGACAGAT+GGG 0.490562 1_3:-52438875 Msa0124570:CDS
AATCAGAAGCATACCAGACT+TGG 0.491328 1_3:+52432240 None:intergenic
ACTCAACAATCAAGATCAAT+GGG 0.491629 1_3:-52438684 Msa0124570:CDS
AAGTTCGATGCCTGTGGTGG+TGG 0.491639 1_3:-52439851 Msa0124570:CDS
TGATGAATTTAGTTTGAATG+AGG 0.491761 1_3:-52440626 Msa0124570:CDS
AGACAACCCACTTCACCCTA+TGG 0.492710 1_3:-52433081 Msa0124570:CDS
AACTGGAATTGCATCTTCAA+AGG 0.493367 1_3:+52432425 None:intergenic
ACATTCTTGCCAGTTTCTTG+TGG 0.493585 1_3:+52439719 None:intergenic
TTGGAGTAAGGAGGAGGTGG+TGG 0.494055 1_3:+52432795 None:intergenic
CAGGAGCGAGTTCGTAAAAG+AGG 0.494691 1_3:-52438982 Msa0124570:CDS
GCTTCCTCCAATTGTGAGAA+TGG 0.494768 1_3:-52440208 Msa0124570:CDS
TTCTCTGCAGAATGCAGGGC+AGG 0.495889 1_3:-52431991 Msa0124570:three_prime_UTR
ATAGTCGAGGTAGGACTGCT+TGG 0.496058 1_3:+52434124 None:intergenic
GTGGAGTAACCCCACTTCTC+CGG 0.496565 1_3:+52445394 None:intergenic
TTTCTCCGGCTAGGTGCCAT+CGG 0.497097 1_3:+52446804 None:intergenic
CTGTTGACATCATCTACTGC+TGG 0.498602 1_3:+52439350 None:intergenic
CTCGTCAAACGTCAAGGAAA+GGG 0.499167 1_3:-52441291 Msa0124570:CDS
TGTTCCTGTGATTCATTGAC+CGG 0.500201 1_3:+52432466 None:intergenic
TTCTTGTTGTATGAGTTGAA+TGG 0.500619 1_3:+52441150 None:intergenic
TCACCCTATGGATCAGCCCT+TGG 0.500806 1_3:-52433069 Msa0124570:CDS
CCTTCTAACAGATGCACCCT+GGG 0.501040 1_3:+52440771 None:intergenic
ACAGAATTCAAATCCTCCTC+TGG 0.501246 1_3:+52438945 None:intergenic
GCCTCCATTCTCACAATTGG+AGG 0.501319 1_3:+52440204 None:intergenic
CCAATCTTACCGGGATAAGG+TGG 0.501364 1_3:+52432666 None:intergenic
GGCATTTCCTCTATCAACAT+TGG 0.501686 1_3:+52433424 None:intergenic
TCCTTCTAACAGATGCACCC+TGG 0.502217 1_3:+52440770 None:intergenic
GCCTCCCGGAAATGCTGCAC+AGG 0.502358 1_3:-52434088 Msa0124570:CDS
GCATACCAGACTTGGATCCT+TGG 0.502770 1_3:+52432248 None:intergenic
GAACTCTGGCTTTGTTTAGG+AGG 0.503854 1_3:-52432130 Msa0124570:three_prime_UTR
AAAGAAACCCAAATAGGAAG+AGG 0.505675 1_3:-52440492 Msa0124570:CDS
AGGGGCTAATGGTGGTGGCA+TGG 0.506090 1_3:+52433337 None:intergenic
TCATTACCACCAAATATTGA+AGG 0.507150 1_3:-52439539 Msa0124570:CDS
GTTTCAACATCTGACTGTCT+GGG 0.507194 1_3:-52438924 Msa0124570:CDS
CTACTCCTCGGTGCAGCCAA+GGG 0.507919 1_3:+52433053 None:intergenic
AGTAACCAAGGATCCAAGTC+TGG 0.508086 1_3:-52432253 Msa0124570:intron
TGTTGACGGTGAGCTTGAAA+TGG 0.510416 1_3:-52433489 Msa0124570:CDS
TCATTACAACCAGCAAGATC+AGG 0.510603 1_3:+52440727 None:intergenic
TCACATCTGCCACAGAATGA+AGG 0.512408 1_3:+52439453 None:intergenic
GTAAATGCTTCGACATCAGC+AGG 0.514568 1_3:+52441333 None:intergenic
GTAGGCTCATCTGTCCTGAT+TGG 0.514975 1_3:-52440172 Msa0124570:CDS
GGTGTGTTCAACTGGAACAT+TGG 0.515346 1_3:-52431604 Msa0124570:three_prime_UTR
AAAACTGATTCGACGGCACA+TGG 0.516357 1_3:+52432862 None:intergenic
CAATGCTTGGGACATTGAAA+AGG 0.516809 1_3:-52438617 Msa0124570:CDS
TTCCTCCGATGGCACCTAGC+CGG 0.517157 1_3:-52446809 Msa0124570:exon
ATTTGAAAACTCAGGTGCAT+GGG 0.517247 1_3:-52439628 Msa0124570:CDS
ATGGCACCTAGCCGGAGAAA+AGG 0.517946 1_3:-52446801 Msa0124570:CDS
AATTCCGATATTGATAGCCA+TGG 0.518040 1_3:-52441078 Msa0124570:CDS
GAAATTGGATCTGGCTGGAG+AGG 0.520107 1_3:-52444068 Msa0124570:CDS
TTTGAATGAGGGTAGTGCAA+TGG 0.520743 1_3:-52440614 Msa0124570:CDS
CCATACTTACTTTCATCGAC+AGG 0.521084 1_3:+52438717 None:intergenic
TACTCCAGGGAAAAGCTGTA+AGG 0.521236 1_3:-52440260 Msa0124570:CDS
AAAAGGACAAAGGAAAGTAT+TGG 0.521626 1_3:-52438600 Msa0124570:CDS
CTTGTGGCAGGTCAGTGAGC+CGG 0.522826 1_3:-52445413 Msa0124570:intron
GGCTGATCCATAGGGTGAAG+TGG 0.526186 1_3:+52433074 None:intergenic
CTGAATCAAGTCTGCATCGG+AGG 0.526643 1_3:-52434346 Msa0124570:CDS
TATCTGTTATGAAGCCCTGT+GGG 0.527043 1_3:+52440899 None:intergenic
GCCGCTCGTCAATGGAAAGT+TGG 0.527617 1_3:-52446750 Msa0124570:CDS
AAGTTAAAGGCTTCCCTGCA+TGG 0.527643 1_3:-52446710 Msa0124570:CDS
TGCAGCATTTCCGGGAGGCA+CGG 0.527783 1_3:+52434092 None:intergenic
CCAGAGTTCAGGCCGAAAAG+AGG 0.528093 1_3:+52432144 None:intergenic
GAAACGATGGAGAGTCAGAA+TGG 0.528180 1_3:-52440326 Msa0124570:CDS
AAATAAATTATAGAATTTGG+CGG 0.528564 1_3:+52431903 None:intergenic
AAATGTTGCCTATTGGAGTA+AGG 0.528606 1_3:+52432783 None:intergenic
TGACTTTGTTCGTGCTGTGA+AGG 0.528886 1_3:-52441265 Msa0124570:CDS
ATCCTTGGTTACTATCACCT+GGG 0.529029 1_3:+52432263 None:intergenic
ATGGGGAAATTGGATCTGGC+TGG 0.529096 1_3:-52444073 Msa0124570:CDS
ATGGGTAAGTCAACTGAAGC+GGG 0.529751 1_3:-52438666 Msa0124570:CDS
TCAGCTAATGCTGCTGAAGA+AGG 0.530507 1_3:-52439998 Msa0124570:CDS
CATGTCGCCTGCCTGAATGC+AGG 0.531731 1_3:+52444093 None:intergenic
TTGTACTTTGAAGCAATGCT+TGG 0.532148 1_3:-52438630 Msa0124570:CDS
ATTCGAGGCATGCAAAATCC+AGG 0.533396 1_3:+52433644 None:intergenic
CATATGATTATCGAGAGAGA+TGG 0.534386 1_3:-52432698 Msa0124570:CDS
CTTTCGCTAAAAGAATCAAA+CGG 0.534893 1_3:+52431487 None:intergenic
CCTATTCTCTGCAGAATGCA+GGG 0.534922 1_3:-52431995 Msa0124570:three_prime_UTR
AGGTCAGTGAGCCGGAGAAG+TGG 0.535255 1_3:-52445405 Msa0124570:CDS
TTCAGCAGCATTAGCTGACA+TGG 0.535616 1_3:+52440003 None:intergenic
ATCTTACCGGGATAAGGTGG+GGG 0.536419 1_3:+52432669 None:intergenic
GCGGCGTCGGCTTCCTCCGA+TGG 0.536568 1_3:-52446820 Msa0124570:exon
AAGTGGATGAGCTGTCATCC+AGG 0.536586 1_3:-52439748 Msa0124570:CDS
GCAACATTTCGTGGAGAACA+TGG 0.537330 1_3:-52432769 Msa0124570:CDS
TAAATTATAGAATTTGGCGG+TGG 0.537930 1_3:+52431906 None:intergenic
TCATGATAACGAGGCATCAA+AGG 0.538846 1_3:-52441004 Msa0124570:CDS
CGATATTGATAGCCATGGGT+TGG 0.538910 1_3:-52441073 Msa0124570:CDS
TCTCGTCAAACGTCAAGGAA+AGG 0.539560 1_3:-52441292 Msa0124570:CDS
TATTGATCCGCCTCAAAATG+AGG 0.539702 1_3:-52439405 Msa0124570:CDS
GAGGAAGCCGACGCCGCTAT+GGG 0.539863 1_3:+52446826 None:intergenic
TGACTGGAATTCCGCACACC+AGG 0.540554 1_3:+52440424 None:intergenic
GATGAATTTAGTTTGAATGA+GGG 0.541477 1_3:-52440625 Msa0124570:CDS
TGTCGATAATTTACTGGATG+CGG 0.541884 1_3:+52432936 None:intergenic
ATTAGAGTTGAGGAGGAACC+TGG 0.541923 1_3:-52440442 Msa0124570:CDS
CAATTTGATCTGCAGCACAT+TGG 0.543400 1_3:+52439693 None:intergenic
GTCCTGCATGTACAGAATGA+TGG 0.543606 1_3:+52432097 None:intergenic
CACAGGGCTTCATAACAGAT+AGG 0.543610 1_3:-52440897 Msa0124570:CDS
AAGATATGCCTTCCCCATAT+GGG 0.544776 1_3:-52432542 Msa0124570:CDS
CTCCCCGGTCAATGAATCAC+AGG 0.545204 1_3:-52432470 Msa0124570:CDS
CAATCTTACCGGGATAAGGT+GGG 0.545809 1_3:+52432667 None:intergenic
ATAAATGTCTTACTCACGGC+CGG 0.546591 1_3:-52431546 Msa0124570:three_prime_UTR
TCAAGTCCATCCCTGACAGA+TGG 0.547414 1_3:-52438876 Msa0124570:CDS
TGTACTTCAGAATTATGCTC+AGG 0.548321 1_3:+52433557 None:intergenic
GATTGAGGCACAAGCTGATG+TGG 0.549043 1_3:+52433362 None:intergenic
ACTGGAATTGCATCTTCAAA+GGG 0.549046 1_3:+52432426 None:intergenic
AAGCACTTTCTTCAAATCAG+TGG 0.549955 1_3:+52445375 None:intergenic
AAAGAATCAAACGGCTGCAA+AGG 0.550187 1_3:+52431496 None:intergenic
GTCCATCATTCTGTACATGC+AGG 0.550263 1_3:-52432099 Msa0124570:three_prime_UTR
TGATCTTAAAATAAAGGGTG+TGG 0.553368 1_3:-52440527 Msa0124570:CDS
TAGAGGTCATACAGAATCAC+AGG 0.553777 1_3:-52433210 Msa0124570:intron
AAATGAGGTTGGTGTTTCTG+AGG 0.554471 1_3:-52439390 Msa0124570:CDS
AATGGAGGCTCTGCTGATGT+AGG 0.554562 1_3:-52440190 Msa0124570:CDS
TGACTCTCCATCGTTTCACA+AGG 0.554889 1_3:+52440332 None:intergenic
AGATGTGGCATAGGCGGTGG+TGG 0.558257 1_3:+52433275 None:intergenic
TCACACAGTCTAACATTCGC+TGG 0.558266 1_3:-52444172 Msa0124570:intron
TCAATGCCTTTCAATTCCAT+AGG 0.558697 1_3:-52446916 Msa0124570:five_prime_UTR
ACGGGTGGAGATTTCCTCCC+CGG 0.559772 1_3:-52432485 Msa0124570:CDS
AGAAGAATCACCACCACCAC+AGG 0.561368 1_3:+52439841 None:intergenic
CGTACTGTATTTAATTCTAG+AGG 0.561930 1_3:-52433227 Msa0124570:CDS
AATCTTACCGGGATAAGGTG+GGG 0.561978 1_3:+52432668 None:intergenic
GAATAAATTATCTAATCAAG+TGG 0.562128 1_3:-52439765 Msa0124570:CDS
GTAAATTATCGACATTCTGA+TGG 0.563334 1_3:-52432927 Msa0124570:CDS
CAGCCAAGGGCTGATCCATA+GGG 0.565814 1_3:+52433066 None:intergenic
AGTCTAGCCTGCATTCAGGC+AGG 0.566489 1_3:-52444100 Msa0124570:CDS
CTTCCCTGCATGGCCTGCCA+CGG 0.566854 1_3:-52446700 Msa0124570:intron
CATAAAACCGTGTGGGACAG+TGG 0.567386 1_3:-52431667 Msa0124570:three_prime_UTR
GTTCCTGTGATTCATTGACC+GGG 0.567669 1_3:+52432467 None:intergenic
CCATGCACACAGCCTTGAGT+TGG 0.567993 1_3:+52431733 None:intergenic
ATATGATTATCGAGAGAGAT+GGG 0.568551 1_3:-52432697 Msa0124570:CDS
ATTCCGATATTGATAGCCAT+GGG 0.569261 1_3:-52441077 Msa0124570:CDS
CAATAGCTATGCGTGTTGCT+CGG 0.569878 1_3:+52438577 None:intergenic
TACATGGAAACATAAAGGGT+TGG 0.570305 1_3:+52440836 None:intergenic
CAAGCCAACCATTAGAGTTG+AGG 0.570478 1_3:-52440452 Msa0124570:CDS
CCAACTCAAGGCTGTGTGCA+TGG 0.571580 1_3:-52431733 Msa0124570:three_prime_UTR
TGATTCGACGGCACATGGCG+AGG 0.571740 1_3:+52432867 None:intergenic
TGTTAGTCACACTGCTAATG+TGG 0.572093 1_3:-52439651 Msa0124570:CDS
TGGGATAAATGTCTTACTCA+CGG 0.572404 1_3:-52431550 Msa0124570:three_prime_UTR
GGTAAAGTAGGCGATAAAGC+AGG 0.573057 1_3:+52441114 None:intergenic
GCAGCTGAGTCATCCTCCGC+TGG 0.573176 1_3:+52441045 None:intergenic
GACTACAACTTCCATTGTGA+AGG 0.577375 1_3:+52438778 None:intergenic
AATTTGCCTATGGAATTGAA+AGG 0.578429 1_3:+52446910 None:intergenic
TGTACTTTGAAGCAATGCTT+GGG 0.578923 1_3:-52438629 Msa0124570:CDS
CATATCTTGGAAGATGTTGA+CGG 0.581258 1_3:-52433503 Msa0124570:CDS
GTAAAAGAGGTAAAATGTGA+AGG 0.581547 1_3:-52438969 Msa0124570:CDS
ATTGGATCTGGCTGGAGAGG+AGG 0.582904 1_3:-52444065 Msa0124570:CDS
CTATTGGAGTAAGGAGGAGG+TGG 0.583070 1_3:+52432792 None:intergenic
TTACCGTGGCAGGCCATGCA+GGG 0.583361 1_3:+52446697 None:intergenic
AACTTTCCATTGACGAGCGG+CGG 0.583743 1_3:+52446752 None:intergenic
TGACCCTATAAGAGAAATGG+AGG 0.584295 1_3:-52433794 Msa0124570:CDS
ATATTGCCTTCAATATTTGG+TGG 0.584568 1_3:+52439533 None:intergenic
AAGAAACCCAAATAGGAAGA+GGG 0.585408 1_3:-52440491 Msa0124570:CDS
GCACTGCATTACTAATAGGT+TGG 0.585480 1_3:+52433030 None:intergenic
CAATCTCTCGTCAAACGTCA+AGG 0.585976 1_3:-52441297 Msa0124570:CDS
TTGCCTTAAGACATTGCCTA+CGG 0.586657 1_3:+52434061 None:intergenic
CTAATAGGTTGGCTACTCCT+CGG 0.588324 1_3:+52433041 None:intergenic
AATGAGGTTGGTGTTTCTGA+GGG 0.588520 1_3:-52439389 Msa0124570:CDS
ATCAAGTCTGCATCGGAGGG+TGG 0.588826 1_3:-52434342 Msa0124570:CDS
TGCCTATTGGAGTAAGGAGG+AGG 0.589187 1_3:+52432789 None:intergenic
AAACGATGGAGAGTCAGAAT+GGG 0.591392 1_3:-52440325 Msa0124570:CDS
TACCCAGGCAAACAATGTAT+GGG 0.591412 1_3:+52431765 None:intergenic
AACAGCATGCAAGACATCGA+AGG 0.592443 1_3:-52432824 Msa0124570:CDS
CGGTGAAGGCGTTTAGATGG+AGG 0.592675 1_3:+52440037 None:intergenic
AAACTGAATCAAGTCTGCAT+CGG 0.593236 1_3:-52434349 Msa0124570:CDS
GATGAAACAAGATGTGGCAT+AGG 0.593396 1_3:+52433266 None:intergenic
CACCTAGAATACCAGATCAC+GGG 0.593642 1_3:-52432503 Msa0124570:CDS
TTGAGGCGGATCAATATTAG+GGG 0.593766 1_3:+52439412 None:intergenic
ACAAAAGAAAACTGATTCGA+CGG 0.595272 1_3:+52432855 None:intergenic
GCATTCAGGCAGGCGACATG+GGG 0.595697 1_3:-52444090 Msa0124570:CDS
CACAAGCTGATGTGGAGGGG+CGG 0.596448 1_3:+52433370 None:intergenic
GATAGAAGATATACAGCATG+TGG 0.596941 1_3:+52439931 None:intergenic
CTCTAGAATTAAATACAGTA+CGG 0.598453 1_3:+52433228 None:intergenic
TGGAATAAACCTTCATTCTG+TGG 0.599663 1_3:-52439462 Msa0124570:CDS
TTGCAAATTGACGTGTTTGG+AGG 0.600311 1_3:+52438828 None:intergenic
GGTATTCTAGGTGGTTCACA+TGG 0.600414 1_3:+52432513 None:intergenic
GAGGCACAAGCTGATGTGGA+GGG 0.600831 1_3:+52433366 None:intergenic
TACAGTACGGCATGGATCAG+AGG 0.601380 1_3:+52433241 None:intergenic
GATTTGAAAACTCAGGTGCA+TGG 0.602583 1_3:-52439629 Msa0124570:CDS
GGATTCAACATAATCTGCAC+AGG 0.603413 1_3:-52432063 Msa0124570:three_prime_UTR
GCTGATCCATAGGGTGAAGT+GGG 0.603553 1_3:+52433075 None:intergenic
TTCATTTCAACATCACGAGA+GGG 0.603955 1_3:+52433455 None:intergenic
TGGCCTCTAAAGCACGGTGA+AGG 0.604411 1_3:+52440023 None:intergenic
TAATGTGGATTTGAAAACTC+AGG 0.604444 1_3:-52439636 Msa0124570:CDS
GAAGAGAGTGATTCTGATGG+AGG 0.606087 1_3:-52433599 Msa0124570:CDS
AAAAGGAGGCAGTAAAGCAG+CGG 0.606560 1_3:-52446784 Msa0124570:CDS
TTTGGTGGTAATGACAGGGC+AGG 0.606611 1_3:+52439548 None:intergenic
AATATTATTGTTAAACTGTG+TGG 0.609229 1_3:+52433403 None:intergenic
ACTCTCCATCGTTTCACAAG+GGG 0.609506 1_3:+52440334 None:intergenic
CAATTAACCAATGCAGCCCA+GGG 0.609581 1_3:-52440787 Msa0124570:CDS
TTATGTTGAATCCTCCTCAA+AGG 0.609918 1_3:+52432073 None:intergenic
GACTCTCCATCGTTTCACAA+GGG 0.610060 1_3:+52440333 None:intergenic
GATCCGCCTCAAAATGAGGT+TGG 0.611253 1_3:-52439401 Msa0124570:CDS
GCCAACCATTAGAGTTGAGG+AGG 0.611440 1_3:-52440449 Msa0124570:CDS
ATGTTTCCATGTAATGACAG+TGG 0.611466 1_3:-52440826 Msa0124570:CDS
TGAATCAAGTCTGCATCGGA+GGG 0.611818 1_3:-52434345 Msa0124570:CDS
CTCCGGCTAGGTGCCATCGG+AGG 0.613521 1_3:+52446807 None:intergenic
TGAAAGTAAGTATGGATCTG+AGG 0.613906 1_3:-52438709 Msa0124570:CDS
AATGAAGAGAGTGATTCTGA+TGG 0.613964 1_3:-52433602 Msa0124570:CDS
TTTGGTCTTGAATGGTAGCA+TGG 0.614302 1_3:-52440689 Msa0124570:CDS
AATTTACTGGATGCGGTACA+GGG 0.614321 1_3:+52432943 None:intergenic
TCTCGATAATCATATGGAGG+CGG 0.614493 1_3:+52432705 None:intergenic
CAAAAGTTCGATGCCTGTGG+TGG 0.614774 1_3:-52439854 Msa0124570:CDS
GGTAAAATGTGAAGGACCAG+AGG 0.615272 1_3:-52438961 Msa0124570:CDS
CTCTCTCGATAATCATATGG+AGG 0.616132 1_3:+52432702 None:intergenic
GAAGAAGTTGAGCTGAACAA+AGG 0.616273 1_3:-52440553 Msa0124570:CDS
AGATCAAACATTCTGCTCTG+TGG 0.617643 1_3:-52440077 Msa0124570:CDS
GAATTAAATACAGTACGGCA+TGG 0.618262 1_3:+52433233 None:intergenic
TGCATGTTGACGAATATGGA+AGG 0.619258 1_3:-52433768 Msa0124570:intron
AAACGGCTGCAAAGGATGAA+GGG 0.619576 1_3:+52431504 None:intergenic
AAGTCCATCCCTGACAGATG+GGG 0.619884 1_3:-52438874 Msa0124570:CDS
AAAGGGTGGTCTAAATGGCA+TGG 0.620038 1_3:+52432443 None:intergenic
GGCGAACCATGGGCTCTGGT+AGG 0.620537 1_3:+52433902 None:intergenic
TGAGGCACAAGCTGATGTGG+AGG 0.620691 1_3:+52433365 None:intergenic
ACAGCATGCAAGACATCGAA+GGG 0.620892 1_3:-52432823 Msa0124570:CDS
CCACCTAGAATACCAGATCA+CGG 0.620965 1_3:-52432504 Msa0124570:CDS
GCTATTGAGCTCTCCCTCTG+TGG 0.622590 1_3:+52440291 None:intergenic
CTTCTATAATTGATAAACAC+AGG 0.622662 1_3:-52433526 Msa0124570:CDS
GAAACAAGATGTGGCATAGG+CGG 0.622997 1_3:+52433269 None:intergenic
ATATCTTCGTCATGATACCT+AGG 0.624314 1_3:+52432558 None:intergenic
TATCAAGACAAGTCCAGATG+TGG 0.625157 1_3:-52439912 Msa0124570:CDS
GGTAAATCATCTTCCACAGA+GGG 0.625649 1_3:-52440304 Msa0124570:CDS
GCACCTAGCCGGAGAAAAGG+AGG 0.625949 1_3:-52446798 Msa0124570:CDS
TTTGAAAACTCAGGTGCATG+GGG 0.626007 1_3:-52439627 Msa0124570:CDS
CCGCTGGACATACCAACCCA+TGG 0.626776 1_3:+52441061 None:intergenic
CATCTGACCCATAGCGGCGT+CGG 0.628258 1_3:-52446833 Msa0124570:five_prime_UTR
GCAATTCCAGTTACAAACAG+AGG 0.629736 1_3:-52432414 Msa0124570:intron
AAAATGTGAAGGACCAGAGG+AGG 0.630132 1_3:-52438958 Msa0124570:CDS
ATGCTGCACAGGAGAACCGT+AGG 0.631261 1_3:-52434077 Msa0124570:CDS
GGCAATTGATGTCATTCTTG+AGG 0.632098 1_3:+52439952 None:intergenic
GGAATTGCATCTTCAAAGGG+TGG 0.633017 1_3:+52432429 None:intergenic
AGGCACAAGCTGATGTGGAG+GGG 0.634449 1_3:+52433367 None:intergenic
GTATTTGGTATGCCAACTCA+AGG 0.636565 1_3:-52431745 Msa0124570:three_prime_UTR
AATGACAGTGGAAAGAATGC+TGG 0.637226 1_3:-52440814 Msa0124570:CDS
TTGGAGGTGATCCTTGTGGA+AGG 0.637454 1_3:+52438844 None:intergenic
GCCAACTTTCCATTGACGAG+CGG 0.638501 1_3:+52446749 None:intergenic
AATGGGTAAGTCAACTGAAG+CGG 0.638517 1_3:-52438667 Msa0124570:CDS
CCGTGATCTGGTATTCTAGG+TGG 0.639150 1_3:+52432504 None:intergenic
GGTGTTACTATGCATGATAG+AGG 0.640091 1_3:-52432906 Msa0124570:CDS
TGGGTTGGTATGTCCAGCGG+AGG 0.641427 1_3:-52441058 Msa0124570:CDS
GTCAGTGAGCCGGAGAAGTG+GGG 0.641630 1_3:-52445403 Msa0124570:CDS
GGATGACACCCATATGGGGA+AGG 0.641685 1_3:+52432534 None:intergenic
ACTTGCCCCTTGTGAAACGA+TGG 0.642321 1_3:-52440339 Msa0124570:CDS
CATGCAGGACTCCTTTGAGG+AGG 0.642904 1_3:-52432084 Msa0124570:three_prime_UTR
AGGTAGGACTGCTTGGATAG+CGG 0.643434 1_3:+52434131 None:intergenic
AGTAGTAATATCCTTCACAA+TGG 0.645350 1_3:-52438789 Msa0124570:CDS
AATATTTGGTGGTAATGACA+GGG 0.645547 1_3:+52439544 None:intergenic
TGGGACATTGAAAAGGACAA+AGG 0.645775 1_3:-52438610 Msa0124570:CDS
GAGGAAGCTATCATCTGCGG+TGG 0.647161 1_3:+52440223 None:intergenic
ATTCATTTCAACATCACGAG+AGG 0.647845 1_3:+52433454 None:intergenic
ACAAGATGTGGCATAGGCGG+TGG 0.647934 1_3:+52433272 None:intergenic
ATAGCATTCTACATACTCCA+GGG 0.648209 1_3:-52440273 Msa0124570:CDS
TTGAGGAGGAACCTGGTGTG+CGG 0.648419 1_3:-52440435 Msa0124570:CDS
AGTCCATCCCTGACAGATGG+GGG 0.648758 1_3:-52438873 Msa0124570:CDS
ACGATCATTAAGAACAGAGA+GGG 0.648806 1_3:-52433824 Msa0124570:CDS
TTCCTGTGATTCATTGACCG+GGG 0.649178 1_3:+52432468 None:intergenic
GTGTTACTATGCATGATAGA+GGG 0.649715 1_3:-52432905 Msa0124570:CDS
TGAGAAGAAAACAGTGTGTG+CGG 0.650111 1_3:+52446959 None:intergenic
CTTCTTGCATAAAACCGTGT+GGG 0.651926 1_3:-52431674 Msa0124570:three_prime_UTR
TCCTCCAATTGTGAGAATGG+AGG 0.652049 1_3:-52440205 Msa0124570:CDS
CCATGGGTTGGTATGTCCAG+CGG 0.652819 1_3:-52441061 Msa0124570:CDS
CAGCAGATAATAGTCGAGGT+AGG 0.653149 1_3:+52434115 None:intergenic
GTGTGCTTCCCTATATTCTG+GGG 0.653795 1_3:+52432998 None:intergenic
CAGCAAAGAGACAGAGCTAG+CGG 0.657152 1_3:-52444137 Msa0124570:CDS
CTGTGATTCATTGACCGGGG+AGG 0.658640 1_3:+52432471 None:intergenic
CTGACATGGCCTCTAAAGCA+CGG 0.659902 1_3:+52440017 None:intergenic
CTAGAATACCAGATCACGGG+TGG 0.661192 1_3:-52432500 Msa0124570:CDS
AGTTGGCATACCAAATACCC+AGG 0.665852 1_3:+52431750 None:intergenic
TCCAATACATCAGAGCACAA+TGG 0.667661 1_3:-52439482 Msa0124570:CDS
TTACTTCATCTGACCCATAG+CGG 0.671151 1_3:-52446839 Msa0124570:five_prime_UTR
GTGGCTATTAATGATCATGA+AGG 0.671423 1_3:-52439893 Msa0124570:CDS
TCCTGTGCAGCATTTCCGGG+AGG 0.671853 1_3:+52434087 None:intergenic
GTGTTTGGAGGTGATCCTTG+TGG 0.672508 1_3:+52438840 None:intergenic
ATCTGTTATGAAGCCCTGTG+GGG 0.673740 1_3:+52440900 None:intergenic
CCTTCTTGCATAAAACCGTG+TGG 0.675280 1_3:-52431675 Msa0124570:three_prime_UTR
ACATGGATGACACCCATATG+GGG 0.676051 1_3:+52432530 None:intergenic
TATCAAACCACTGTCCCACA+CGG 0.676230 1_3:+52431660 None:intergenic
CTGTGGGGATAAGTCAGCAG+CGG 0.677313 1_3:+52440915 None:intergenic
TGTTGCCTATTGGAGTAAGG+AGG 0.678002 1_3:+52432786 None:intergenic
GGCCCAGGTGATAGTAACCA+AGG 0.678825 1_3:-52432265 Msa0124570:exon
GGTGGTGGCATGGAAGATTG+AGG 0.681211 1_3:+52433347 None:intergenic
GAGGTAGATGAAACAAGATG+TGG 0.681315 1_3:+52433260 None:intergenic
ACGGCAGCAGATAATAGTCG+AGG 0.681559 1_3:+52434111 None:intergenic
AGTCGTTGTAGAGTTGTCAG+AGG 0.684741 1_3:-52431965 Msa0124570:three_prime_UTR
GCTGCTGACTTATCCCCACA+GGG 0.684778 1_3:-52440913 Msa0124570:CDS
TTCGACGGCACATGGCGAGG+CGG 0.686762 1_3:+52432870 None:intergenic
TTGGAGGAAGCTATCATCTG+CGG 0.690162 1_3:+52440220 None:intergenic
TTGCAAAAGTTCGATGCCTG+TGG 0.691993 1_3:-52439857 Msa0124570:CDS
GCATGCAAGACATCGAAGGG+AGG 0.692791 1_3:-52432820 Msa0124570:CDS
GCTATTAATGATCATGAAGG+TGG 0.692796 1_3:-52439890 Msa0124570:CDS
AGATGAATCTCATGATAACG+AGG 0.696998 1_3:-52441013 Msa0124570:CDS
CTTGGTGAAGCTAACTGTGG+TGG 0.698159 1_3:-52441201 Msa0124570:CDS
ACATTGGACCCAGAAGCTTG+AGG 0.699979 1_3:-52431588 Msa0124570:three_prime_UTR
TCTTACCGGGATAAGGTGGG+GGG 0.703120 1_3:+52432670 None:intergenic
CTATCTGTTATGAAGCCCTG+TGG 0.714051 1_3:+52440898 None:intergenic
GACCCTATAAGAGAAATGGA+GGG 0.715184 1_3:-52433793 Msa0124570:CDS
ATCAGCCCTTGGCTGCACCG+AGG 0.715486 1_3:-52433058 Msa0124570:CDS
GGTCTTGAATGGTAGCATGG+AGG 0.721820 1_3:-52440686 Msa0124570:CDS
CAACTTGGTGAAGCTAACTG+TGG 0.738092 1_3:-52441204 Msa0124570:CDS
GACGATCATTAAGAACAGAG+AGG 0.746316 1_3:-52433825 Msa0124570:CDS
GGGTAAATCATCTTCCACAG+AGG 0.753500 1_3:-52440305 Msa0124570:CDS
TGATGTCGAAGCATTTACCG+AGG 0.757842 1_3:-52441328 Msa0124570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTTTATAATTTTATGTT+TGG - chr1_3:52431824-52431843 Msa0124570:three_prime_UTR 10.0%
!!! AAGTTTATAATTTTATGTTT+GGG - chr1_3:52431825-52431844 Msa0124570:three_prime_UTR 10.0%
!!! TTAATTTTGAACAATTAATT+TGG + chr1_3:52432904-52432923 None:intergenic 10.0%
!!! TATAGTTTACTATATTTTAA+TGG - chr1_3:52433541-52433560 Msa0124570:CDS 10.0%
!!! TTTATTTTCTGTTTTTAATA+TGG - chr1_3:52434789-52434808 Msa0124570:intron 10.0%
!! CTAAAATAAAAATATAAAGT+AGG + chr1_3:52440607-52440626 None:intergenic 10.0%
!! TAATAAAAAATATAGTTCAA+AGG - chr1_3:52440850-52440869 Msa0124570:CDS 10.0%
!! AATAAAAAATATAGTTCAAA+GGG - chr1_3:52440851-52440870 Msa0124570:CDS 10.0%
!! TTAAAATCAATTTAGAAATT+TGG + chr1_3:52441228-52441247 None:intergenic 10.0%
!!! AAATTTCTAAATTGATTTTA+AGG - chr1_3:52441227-52441246 Msa0124570:CDS 10.0%
!! TTCAAAAAATAATCAAATAT+CGG - chr1_3:52441490-52441509 Msa0124570:intron 10.0%
!! TAATATAATAATACAATAAG+AGG - chr1_3:52443810-52443829 Msa0124570:intron 10.0%
!!! TAAAATAAAAAATTTTGCAT+AGG + chr1_3:52444007-52444026 None:intergenic 10.0%
!!! ATTATCTTTTAACTTTTTAT+AGG - chr1_3:52444515-52444534 Msa0124570:intron 10.0%
!!! TTAAATTAAGCTTTTTTTAT+TGG - chr1_3:52445881-52445900 Msa0124570:intron 10.0%
!!! TAAATTAAGCTTTTTTTATT+GGG - chr1_3:52445882-52445901 Msa0124570:intron 10.0%
!! ATGAAATAAATTATAGAATT+TGG + chr1_3:52446571-52446590 None:intergenic 10.0%
!!! AAACTTTTAAACATAATTAG+CGG + chr1_3:52431963-52431982 None:intergenic 15.0%
!!! GTAATTATTCATTAATTTTG+TGG - chr1_3:52432045-52432064 Msa0124570:three_prime_UTR 15.0%
!!! TAGACTTAATTTTTTATTCA+TGG - chr1_3:52432078-52432097 Msa0124570:three_prime_UTR 15.0%
!!! AGACTTAATTTTTTATTCAT+GGG - chr1_3:52432079-52432098 Msa0124570:three_prime_UTR 15.0%
!!! TTATTATTGATTATAGCAAA+TGG - chr1_3:52432121-52432140 Msa0124570:three_prime_UTR 15.0%
!!! AAGTTAATTTCTTATTTGTT+TGG - chr1_3:52432177-52432196 Msa0124570:intron 15.0%
!!! GTCTTTTTTTTTTTTTTGAA+TGG - chr1_3:52434058-52434077 Msa0124570:intron 15.0%
!! AATTTAAAAAACACCATATT+GGG + chr1_3:52435348-52435367 None:intergenic 15.0%
!! TAATTTATTAGAATTCCAAT+TGG - chr1_3:52436336-52436355 Msa0124570:intron 15.0%
!! AATTTATTAGAATTCCAATT+GGG - chr1_3:52436337-52436356 Msa0124570:intron 15.0%
!! TAAATAGTTATGAAAATTCA+AGG - chr1_3:52436364-52436383 Msa0124570:intron 15.0%
!! AAATAGTTATGAAAATTCAA+GGG - chr1_3:52436365-52436384 Msa0124570:intron 15.0%
!! ATTTGTACAAAAAATATTCA+AGG + chr1_3:52439189-52439208 None:intergenic 15.0%
!! ATAAAAAATATCACTTTACT+AGG + chr1_3:52439362-52439381 None:intergenic 15.0%
!! CATAAATAACTTTCTTTAAT+TGG + chr1_3:52439419-52439438 None:intergenic 15.0%
!!! TTTTTCTTGAATAAAAGAAA+TGG + chr1_3:52439444-52439463 None:intergenic 15.0%
!!! TTATCAATGGTTTTTTTTTT+TGG - chr1_3:52440643-52440662 Msa0124570:CDS 15.0%
!!! AATCTTTTTCATTTTATCTA+GGG + chr1_3:52440886-52440905 None:intergenic 15.0%
!!! TAATCTTTTTCATTTTATCT+AGG + chr1_3:52440887-52440906 None:intergenic 15.0%
!!! TACAAAATGTTTTAGAAATA+GGG + chr1_3:52441199-52441218 None:intergenic 15.0%
!!! ATACAAAATGTTTTAGAAAT+AGG + chr1_3:52441200-52441219 None:intergenic 15.0%
!!! TATTTCTAAAACATTTTGTA+TGG - chr1_3:52441199-52441218 Msa0124570:CDS 15.0%
!!! ATATTAGTAACAATGAATTT+TGG - chr1_3:52441717-52441736 Msa0124570:intron 15.0%
!!! ATTCTATTTTTAAGCTTTTA+TGG - chr1_3:52441776-52441795 Msa0124570:intron 15.0%
!!! TTCTATTTTTAAGCTTTTAT+GGG - chr1_3:52441777-52441796 Msa0124570:intron 15.0%
!!! TTTTGATTCATATATAATAC+TGG - chr1_3:52441971-52441990 Msa0124570:intron 15.0%
!! ATTGCTTATAAATTAAAGTT+TGG - chr1_3:52442217-52442236 Msa0124570:intron 15.0%
!! ACTAAATTGTACAAAAATAA+TGG + chr1_3:52442622-52442641 None:intergenic 15.0%
!! TAGACAAATTTCAAATAAAT+GGG + chr1_3:52443706-52443725 None:intergenic 15.0%
!! TTAGACAAATTTCAAATAAA+TGG + chr1_3:52443707-52443726 None:intergenic 15.0%
!! ATCAATTAATTATCAAATGT+TGG + chr1_3:52444269-52444288 None:intergenic 15.0%
!!! TTAACTTTTTATAGGTTTTA+AGG - chr1_3:52444523-52444542 Msa0124570:intron 15.0%
!! ATTACTATTTAAATAATCAG+TGG - chr1_3:52445305-52445324 Msa0124570:intron 15.0%
!! AAATAAATTATAGAATTTGG+CGG + chr1_3:52446568-52446587 None:intergenic 15.0%
!!! TCTTTTGAGTTTAGAATTAT+TGG - chr1_3:52432014-52432033 Msa0124570:three_prime_UTR 20.0%
!!! AAAAAATTAAGTCTAAGACT+AGG + chr1_3:52432073-52432092 None:intergenic 20.0%
!!! TTGGTAATACTTGAAATTTA+AGG - chr1_3:52432313-52432332 Msa0124570:intron 20.0%
!! TTCTATCACTAAAATAAAGA+AGG + chr1_3:52432561-52432580 None:intergenic 20.0%
!!! AGTTTACTATATTTTAATGG+TGG - chr1_3:52433544-52433563 Msa0124570:CDS 20.0%
!!! TTACTGACTTATTGTTAATA+GGG - chr1_3:52433923-52433942 Msa0124570:CDS 20.0%
!! CAAAAAAAAAAAAAAGACAG+TGG + chr1_3:52434056-52434075 None:intergenic 20.0%
!!! AGATTCAGAAATAGTTTTTT+CGG + chr1_3:52434113-52434132 None:intergenic 20.0%
!!! TCAATTAAGAAACAGTTTTT+CGG + chr1_3:52434558-52434577 None:intergenic 20.0%
!! AATTATATGGTTCATTTACT+CGG - chr1_3:52434631-52434650 Msa0124570:intron 20.0%
!!! ATTTTCTGTTTTTAATATGG+TGG - chr1_3:52434792-52434811 Msa0124570:intron 20.0%
!! AAATTTCAATTCAAATCTGA+CGG + chr1_3:52434931-52434950 None:intergenic 20.0%
!! GAATTTAAAAAACACCATAT+TGG + chr1_3:52435349-52435368 None:intergenic 20.0%
!! GAATAAATTATCTAATCAAG+TGG - chr1_3:52438703-52438722 Msa0124570:CDS 20.0%
!!! TTACATTTTGAATCAAGATT+TGG + chr1_3:52438875-52438894 None:intergenic 20.0%
!! ATAATATTGCCTTCAATATT+TGG + chr1_3:52438941-52438960 None:intergenic 20.0%
!! TTGTTATATAATATATGGCT+AGG - chr1_3:52439283-52439302 Msa0124570:intron 20.0%
!!! TGAATACTTGTTGATATAAT+TGG - chr1_3:52440017-52440036 Msa0124570:CDS 20.0%
!! AGTATTAACAATCCAAAATT+GGG + chr1_3:52440382-52440401 None:intergenic 20.0%
!! AAGTATTAACAATCCAAAAT+TGG + chr1_3:52440383-52440402 None:intergenic 20.0%
!!! ACTTAGTGTTTTTTATGATT+GGG + chr1_3:52440569-52440588 None:intergenic 20.0%
!!! AACTTAGTGTTTTTTATGAT+TGG + chr1_3:52440570-52440589 None:intergenic 20.0%
!!! TATTATGTTTTGTCAATTAG+TGG - chr1_3:52440785-52440804 Msa0124570:CDS 20.0%
!! TTTCAACTAAAATCAAATAG+CGG + chr1_3:52441163-52441182 None:intergenic 20.0%
!!! AAATTGATTTTAAGGCATTT+TGG - chr1_3:52441235-52441254 Msa0124570:CDS 20.0%
!!! AATTGATTTTAAGGCATTTT+GGG - chr1_3:52441236-52441255 Msa0124570:CDS 20.0%
!! TGAACAAATTACATGAATAA+TGG + chr1_3:52441474-52441493 None:intergenic 20.0%
!! AAATAGTAAAATCCATTTCA+TGG + chr1_3:52442385-52442404 None:intergenic 20.0%
!! AATGATAAATGAATGATCTT+TGG + chr1_3:52442795-52442814 None:intergenic 20.0%
!! GTAATTCAATACCAAAAATA+AGG + chr1_3:52442847-52442866 None:intergenic 20.0%
!!! TATTTTTGGTATTGAATTAC+TGG - chr1_3:52442847-52442866 Msa0124570:intron 20.0%
!!! TAAATGGAGATATTGATTAT+GGG + chr1_3:52443240-52443259 None:intergenic 20.0%
!!! ATAAATGGAGATATTGATTA+TGG + chr1_3:52443241-52443260 None:intergenic 20.0%
!! TGTTTATTGTTAGGAATAAA+TGG + chr1_3:52443256-52443275 None:intergenic 20.0%
!!! ATCAAAAGGCATTTTATTTT+GGG + chr1_3:52443668-52443687 None:intergenic 20.0%
!!! AATCAAAAGGCATTTTATTT+TGG + chr1_3:52443669-52443688 None:intergenic 20.0%
!! AAACTGAAGAAAAAATCAAA+AGG + chr1_3:52443682-52443701 None:intergenic 20.0%
!! TTGAATTTATACCTCAAATT+TGG - chr1_3:52443899-52443918 Msa0124570:intron 20.0%
!!! ATGTAGTATTATTTTTCTTC+TGG - chr1_3:52443929-52443948 Msa0124570:intron 20.0%
!! AATATTATTGTTAAACTGTG+TGG + chr1_3:52445068-52445087 None:intergenic 20.0%
!! TTAATCTTTCGTGATTATTA+TGG + chr1_3:52445741-52445760 None:intergenic 20.0%
!!! ATAATTGATGCTTATTTTGA+TGG - chr1_3:52445826-52445845 Msa0124570:intron 20.0%
!! ATAGAAAATTATCATGATAG+AGG + chr1_3:52446105-52446124 None:intergenic 20.0%
!!! ATTAATTTTCCAATGTTGAA+GGG + chr1_3:52446145-52446164 None:intergenic 20.0%
!! TTCAACATTGGAAAATTAAT+GGG - chr1_3:52446145-52446164 Msa0124570:intron 20.0%
!! TACTGATCTAAATTCTATAA+GGG + chr1_3:52446599-52446618 None:intergenic 20.0%
!!! ACATTTCTGAAAGATATTTT+AGG + chr1_3:52447052-52447071 None:intergenic 20.0%
!!! TGCGTTTTTTCATATGTTTT+TGG - chr1_3:52431849-52431868 Msa0124570:three_prime_UTR 25.0%
! TCTTGAAAGAAGTTTATTTG+TGG - chr1_3:52432343-52432362 Msa0124570:intron 25.0%
! CTTGAAAGAAGTTTATTTGT+GGG - chr1_3:52432344-52432363 Msa0124570:intron 25.0%
!!! TTAGTTTTACCCTAAATTTC+AGG + chr1_3:52432419-52432438 None:intergenic 25.0%
!! AAATCTTCTATGAGACTTTT+TGG - chr1_3:52432439-52432458 Msa0124570:CDS 25.0%
!! AATCTTCTATGAGACTTTTT+GGG - chr1_3:52432440-52432459 Msa0124570:CDS 25.0%
! GAAGGGAATTTATGATTTAT+TGG - chr1_3:52432527-52432546 Msa0124570:CDS 25.0%
! CTTCAAGTCAAACAAATATT+TGG + chr1_3:52432765-52432784 None:intergenic 25.0%
!!! TTCACGTTTTTACTCTAAAA+AGG + chr1_3:52432847-52432866 None:intergenic 25.0%
!!! TTTTAGAGTAAAAACGTGAA+AGG - chr1_3:52432847-52432866 Msa0124570:CDS 25.0%
!!! CTTTTGGTTAAAAAACTGAT+TGG - chr1_3:52432969-52432988 Msa0124570:CDS 25.0%
!!! AAAGTGCTTGTTTTCTTTTT+TGG - chr1_3:52433107-52433126 Msa0124570:intron 25.0%
! AAAGCATACTTACATTTGTT+GGG + chr1_3:52433135-52433154 None:intergenic 25.0%
!! AAAAGCATACTTACATTTGT+TGG + chr1_3:52433136-52433155 None:intergenic 25.0%
! CTTGGTTACAAAATTGAAAA+TGG + chr1_3:52433209-52433228 None:intergenic 25.0%
! TCTGTGATATCCATATTATT+AGG - chr1_3:52433261-52433280 Msa0124570:CDS 25.0%
! TCATAGCTATCCTAATAATA+TGG + chr1_3:52433274-52433293 None:intergenic 25.0%
! GATATAATGTCAGTAAAGAA+GGG + chr1_3:52433328-52433347 None:intergenic 25.0%
! AGATATAATGTCAGTAAAGA+AGG + chr1_3:52433329-52433348 None:intergenic 25.0%
! TCTTTACTGACATTATATCT+CGG - chr1_3:52433329-52433348 Msa0124570:CDS 25.0%
!! GATATGCTTATTATGGTTTT+TGG - chr1_3:52433366-52433385 Msa0124570:CDS 25.0%
! CTAAGTATGGTAAAAGATTA+CGG - chr1_3:52433466-52433485 Msa0124570:CDS 25.0%
! ATGAATACTAAAATAGTCAC+AGG + chr1_3:52433663-52433682 None:intergenic 25.0%
!!! CATTTTAGCTTATCAACTAT+TGG - chr1_3:52433804-52433823 Msa0124570:CDS 25.0%
! ATGTGTAGTAGAAAATATGA+TGG - chr1_3:52433839-52433858 Msa0124570:CDS 25.0%
!!! GTTACTGACTTATTGTTAAT+AGG - chr1_3:52433922-52433941 Msa0124570:CDS 25.0%
!!! TACTGACTTATTGTTAATAG+GGG - chr1_3:52433924-52433943 Msa0124570:CDS 25.0%
! ATAATACATACAACAGAAAC+TGG - chr1_3:52434257-52434276 Msa0124570:intron 25.0%
!!! CATAGTTTTGAATACTGTAT+TGG - chr1_3:52435013-52435032 Msa0124570:intron 25.0%
! TCAGTCAGAAATTTCTTAAT+AGG - chr1_3:52435085-52435104 Msa0124570:intron 25.0%
!! GTGTATTTAAGGTTTAAAAC+AGG + chr1_3:52435576-52435595 None:intergenic 25.0%
! TATGTGAATCAATAAACTCA+AGG - chr1_3:52435881-52435900 Msa0124570:intron 25.0%
! AATTTGCATGAACGATTAAA+GGG - chr1_3:52436294-52436313 Msa0124570:intron 25.0%
!!! TATAGTGGTAGAAAAGTATT+TGG - chr1_3:52436399-52436418 Msa0124570:intron 25.0%
!!! ATAGTGGTAGAAAAGTATTT+GGG - chr1_3:52436400-52436419 Msa0124570:intron 25.0%
!! AGTTGATTAAACCCTTTTTA+AGG - chr1_3:52436797-52436816 Msa0124570:intron 25.0%
!! GTTGATTAAACCCTTTTTAA+GGG - chr1_3:52436798-52436817 Msa0124570:intron 25.0%
!! TTGAAAGTCTATTTCTTTGT+TGG - chr1_3:52436878-52436897 Msa0124570:intron 25.0%
! CCATAGTTTCAATAATTTGA+GGG - chr1_3:52436921-52436940 Msa0124570:intron 25.0%
! TTAAAAAAAGAGAGACAACT+TGG - chr1_3:52437249-52437268 Msa0124570:intron 25.0%
! TCATTACATGGAAACATAAA+GGG + chr1_3:52437639-52437658 None:intergenic 25.0%
!!! TGATGAATTTAGTTTGAATG+AGG - chr1_3:52437842-52437861 Msa0124570:intron 25.0%
!!! GATGAATTTAGTTTGAATGA+GGG - chr1_3:52437843-52437862 Msa0124570:intron 25.0%
! TTATTCTCTGTTGAAATCAT+CGG + chr1_3:52438689-52438708 None:intergenic 25.0%
! CTATCAATATGATCTAAATG+AGG + chr1_3:52439323-52439342 None:intergenic 25.0%
! TTTATTCATGTTTCAGTGAT+AGG - chr1_3:52439377-52439396 Msa0124570:CDS 25.0%
! TCACTATTCAAATTCAACAA+CGG + chr1_3:52440000-52440019 None:intergenic 25.0%
! TTCTCGATATTTGTCTATTT+AGG - chr1_3:52440051-52440070 Msa0124570:CDS 25.0%
! GATGACAATAATAATACACA+TGG + chr1_3:52440112-52440131 None:intergenic 25.0%
! ACTAGCTGTTATAGTTTATA+TGG - chr1_3:52440162-52440181 Msa0124570:CDS 25.0%
! AATATTGACAATGAGTGTTT+AGG - chr1_3:52440409-52440428 Msa0124570:CDS 25.0%
! AAATGATTCTATACTCCTTA+TGG + chr1_3:52440443-52440462 None:intergenic 25.0%
! ATTTATCAAGACCAACAATT+TGG - chr1_3:52440465-52440484 Msa0124570:CDS 25.0%
!!! CTTAGTGTTTTTTATGATTG+GGG + chr1_3:52440568-52440587 None:intergenic 25.0%
! CTTGTAATCTTAAGATTCTA+TGG + chr1_3:52440929-52440948 None:intergenic 25.0%
! CATAGAATCTTAAGATTACA+AGG - chr1_3:52440927-52440946 Msa0124570:CDS 25.0%
! TGTGATATAAACTACATTGT+TGG + chr1_3:52440988-52441007 None:intergenic 25.0%
!!! TTTTAGAAATAGGGTCAATT+TGG + chr1_3:52441190-52441209 None:intergenic 25.0%
!!! ATTGATTTTAAGGCATTTTG+GGG - chr1_3:52441237-52441256 Msa0124570:CDS 25.0%
!!! TTCCTCTATCTTTTGTTTTT+TGG - chr1_3:52441364-52441383 Msa0124570:intron 25.0%
!! ATACTGGTAACAATGAATTT+TGG - chr1_3:52441987-52442006 Msa0124570:intron 25.0%
!!! TATTTTTGAGCTTTTATGAG+TGG - chr1_3:52442050-52442069 Msa0124570:intron 25.0%
! GTTATTAAAATTCTGTGCAA+AGG - chr1_3:52442185-52442204 Msa0124570:intron 25.0%
! AATGAAAATTCTCCATAACA+AGG + chr1_3:52442250-52442269 None:intergenic 25.0%
! TGAGATCGTTAAATGTTATA+TGG - chr1_3:52442323-52442342 Msa0124570:intron 25.0%
!! CATTATTGTACTAGTATTGA+GGG + chr1_3:52442462-52442481 None:intergenic 25.0%
! CTCAATACTAGTACAATAAT+GGG - chr1_3:52442461-52442480 Msa0124570:intron 25.0%
!! CTGCATATTTTCTTTACATT+TGG - chr1_3:52442684-52442703 Msa0124570:intron 25.0%
!! TACATTTGGTATTGAATTAC+CGG - chr1_3:52442698-52442717 Msa0124570:intron 25.0%
!! TCTACGATTAAATAGTGTTT+TGG + chr1_3:52442998-52443017 None:intergenic 25.0%
!!! TCGTAGAAACTGATTTTTAT+TGG - chr1_3:52443011-52443030 Msa0124570:intron 25.0%
!!! TAGAAACTGATTTTTATTGG+TGG - chr1_3:52443014-52443033 Msa0124570:intron 25.0%
! ATCCATATCTAAGAAATTCT+AGG - chr1_3:52443135-52443154 Msa0124570:intron 25.0%
! TCCATATCTAAGAAATTCTA+GGG - chr1_3:52443136-52443155 Msa0124570:intron 25.0%
! GATAGTTATTGAATGGTTAT+GGG + chr1_3:52443218-52443237 None:intergenic 25.0%
! ATTATGGGATAGTTATTGAA+TGG + chr1_3:52443225-52443244 None:intergenic 25.0%
! TGTCAGTTATGTTTATTGTT+AGG + chr1_3:52443265-52443284 None:intergenic 25.0%
!!! ATTATTTTTCTTCTGGAATC+TGG - chr1_3:52443936-52443955 Msa0124570:intron 25.0%
!!! TTATTTTTCTTCTGGAATCT+GGG - chr1_3:52443937-52443956 Msa0124570:intron 25.0%
! TGATTCAGTTTCAAGATTAT+CGG + chr1_3:52444110-52444129 None:intergenic 25.0%
!! ATCTATTCTTTCTTCTCTTT+TGG + chr1_3:52444241-52444260 None:intergenic 25.0%
! AACTATATAAATCCAATTCC+CGG + chr1_3:52444599-52444618 None:intergenic 25.0%
! CTTCTATAATTGATAAACAC+AGG - chr1_3:52444942-52444961 Msa0124570:intron 25.0%
!!! CTCTAGAATTAAATACAGTA+CGG + chr1_3:52445243-52445262 None:intergenic 25.0%
!! AATCAGTTTTCTTTTGTTCA+CGG - chr1_3:52445619-52445638 Msa0124570:intron 25.0%
! ATCAATTATTCCAATCTTAC+CGG + chr1_3:52445815-52445834 None:intergenic 25.0%
!!! TTAAGCTTTTTTTATTGGGT+AGG - chr1_3:52445886-52445905 Msa0124570:intron 25.0%
! TAGAGGAAAAATAATGGTAA+GGG + chr1_3:52446088-52446107 None:intergenic 25.0%
! ATAGAGGAAAAATAATGGTA+AGG + chr1_3:52446089-52446108 None:intergenic 25.0%
! TCATGATAGAGGAAAAATAA+TGG + chr1_3:52446094-52446113 None:intergenic 25.0%
!! CATTAATTTTCCAATGTTGA+AGG + chr1_3:52446146-52446165 None:intergenic 25.0%
! CTTCAACATTGGAAAATTAA+TGG - chr1_3:52446144-52446163 Msa0124570:intron 25.0%
!! GTACTGATCTAAATTCTATA+AGG + chr1_3:52446600-52446619 None:intergenic 25.0%
! CTGAAATATATAATCGTAGT+TGG - chr1_3:52446843-52446862 Msa0124570:five_prime_UTR 25.0%
!! TACATCATTATTTTCTTAGC+CGG + chr1_3:52446944-52446963 None:intergenic 25.0%
!! AAGGCATTGAATTGAGATTA+TGG + chr1_3:52431542-52431561 None:intergenic 30.0%
AATTTGCCTATGGAATTGAA+AGG + chr1_3:52431561-52431580 None:intergenic 30.0%
! CTAGTTCTTGCTAAAGTTAA+AGG - chr1_3:52431745-52431764 Msa0124570:three_prime_UTR 30.0%
!!! TATGTTTTTGGATTGCATGT+TGG - chr1_3:52431861-52431880 Msa0124570:three_prime_UTR 30.0%
! TTGGTGGAGTTTAGAATTAT+TGG - chr1_3:52431880-52431899 Msa0124570:three_prime_UTR 30.0%
! GTTTGGTAATTGTGATGAAT+TGG - chr1_3:52432194-52432213 Msa0124570:intron 30.0%
TGTGATGAATTGGATTGAAA+CGG - chr1_3:52432204-52432223 Msa0124570:intron 30.0%
! TGATTATCAATATTTTCCCC+AGG + chr1_3:52432280-52432299 None:intergenic 30.0%
TAATCAGTTGACTATATGCT+TGG - chr1_3:52432294-52432313 Msa0124570:intron 30.0%
! GGGTAAACAAATGATAATGA+TGG - chr1_3:52432364-52432383 Msa0124570:intron 30.0%
TAAATAGTGAACTACATGCT+TGG - chr1_3:52432389-52432408 Msa0124570:intron 30.0%
! CTTGGTAATCCTGAAATTTA+GGG - chr1_3:52432407-52432426 Msa0124570:intron 30.0%
! ATCTTCTATGAGACTTTTTG+GGG - chr1_3:52432441-52432460 Msa0124570:CDS 30.0%
GGCAAGCAAATGATAATAAT+GGG - chr1_3:52432463-52432482 Msa0124570:CDS 30.0%
TTTGTCTATGAAACAAGCAT+AGG + chr1_3:52432604-52432623 None:intergenic 30.0%
CAAGTCAAACAAATATTTGG+AGG + chr1_3:52432762-52432781 None:intergenic 30.0%
! CAAAAAGTAGTTTTTGTGTC+TGG - chr1_3:52432788-52432807 Msa0124570:CDS 30.0%
! TTTTGTTGATGCAAGAGAAT+TGG - chr1_3:52432946-52432965 Msa0124570:CDS 30.0%
AACAAACTCGAAAAGTCAAA+TGG + chr1_3:52433034-52433053 None:intergenic 30.0%
ATTCACATTTCGCTTAAACT+AGG + chr1_3:52433242-52433261 None:intergenic 30.0%
CAATTGTGCACACTAAAAAA+GGG + chr1_3:52433414-52433433 None:intergenic 30.0%
ACAATTGTGCACACTAAAAA+AGG + chr1_3:52433415-52433434 None:intergenic 30.0%
!! TTCGTAGTTTTACCTAAGTA+TGG - chr1_3:52433453-52433472 Msa0124570:CDS 30.0%
! CGTAATCTTTTACCATACTT+AGG + chr1_3:52433468-52433487 None:intergenic 30.0%
AGTCATCATACAATACATCA+GGG - chr1_3:52433492-52433511 Msa0124570:CDS 30.0%
ACATATAAACTGTATCCTAC+TGG + chr1_3:52433641-52433660 None:intergenic 30.0%
!! ATTGTTGACCTACTTTTATG+AGG - chr1_3:52433734-52433753 Msa0124570:intron 30.0%
TACTACTACCTCATAAAAGT+AGG + chr1_3:52433745-52433764 None:intergenic 30.0%
!!! ACATGGTTTTAATAAGCTGA+AGG + chr1_3:52433896-52433915 None:intergenic 30.0%
AAGTCAGTAACATTGTTACA+TGG + chr1_3:52433913-52433932 None:intergenic 30.0%
TTAAGTGAACTCATACTTGT+AGG - chr1_3:52434154-52434173 Msa0124570:CDS 30.0%
TCTAACTGAATAACTAGCAA+CGG - chr1_3:52434692-52434711 Msa0124570:intron 30.0%
AACATAGATCACTCTTGATA+TGG - chr1_3:52434965-52434984 Msa0124570:intron 30.0%
TCATCATGGCAATTTATATG+AGG + chr1_3:52435061-52435080 None:intergenic 30.0%
!! TTCTGACTGATTTTTCATCA+TGG + chr1_3:52435075-52435094 None:intergenic 30.0%
GCTATGAAAAGTTACAAGTT+AGG + chr1_3:52435246-52435265 None:intergenic 30.0%
! TTCTAACCAATGTTTTCCAA+CGG - chr1_3:52435366-52435385 Msa0124570:intron 30.0%
! ATCCTATTTGAAGTTGTTGT+TGG + chr1_3:52435521-52435540 None:intergenic 30.0%
! ATTTAAGGTTTAAAACAGGC+TGG + chr1_3:52435572-52435591 None:intergenic 30.0%
AAGAAAGTTGGGTGTATTTA+AGG + chr1_3:52435587-52435606 None:intergenic 30.0%
TAAATACACCCAACTTTCTT+TGG - chr1_3:52435587-52435606 Msa0124570:intron 30.0%
AAAATCTTCTCGGTAAATGA+GGG + chr1_3:52435657-52435676 None:intergenic 30.0%
TTCTCTTTCCAAAATCTTCT+CGG + chr1_3:52435667-52435686 None:intergenic 30.0%
! AAACTTTTCTGTTAGCAGAT+TGG + chr1_3:52435908-52435927 None:intergenic 30.0%
TCTCTGTGGCATAATATATT+TGG - chr1_3:52436088-52436107 Msa0124570:intron 30.0%
!! TTTTGAAGAGAACTAAAGCT+AGG + chr1_3:52436118-52436137 None:intergenic 30.0%
TCTTCAAAATGTACTCATGA+TGG - chr1_3:52436129-52436148 Msa0124570:intron 30.0%
CTTCAAAATGTACTCATGAT+GGG - chr1_3:52436130-52436149 Msa0124570:intron 30.0%
TAAACTGCACTTTGTTAAGA+AGG + chr1_3:52436176-52436195 None:intergenic 30.0%
CTTAACAAAGTGCAGTTTAA+CGG - chr1_3:52436177-52436196 Msa0124570:intron 30.0%
CAATTTGCATGAACGATTAA+AGG - chr1_3:52436293-52436312 Msa0124570:intron 30.0%
TTATTAGAATTCCAATTGGG+TGG - chr1_3:52436340-52436359 Msa0124570:intron 30.0%
TATTAGAATTCCAATTGGGT+GGG - chr1_3:52436341-52436360 Msa0124570:intron 30.0%
AGGGAAAAAGTTGTTTATAG+TGG - chr1_3:52436384-52436403 Msa0124570:intron 30.0%
TTGCCATCAAATGATAAGTA+AGG - chr1_3:52436743-52436762 Msa0124570:intron 30.0%
CAACCTTACTTATCATTTGA+TGG + chr1_3:52436749-52436768 None:intergenic 30.0%
CATCAAATGATAAGTAAGGT+TGG - chr1_3:52436747-52436766 Msa0124570:intron 30.0%
AAGGTTGGATTTGATTGAAT+TGG - chr1_3:52436762-52436781 Msa0124570:intron 30.0%
!! ATTAAACCCTTTTTAAGGGA+AGG - chr1_3:52436802-52436821 Msa0124570:intron 30.0%
TAGTTTAAACCAACCTGATA+GGG - chr1_3:52436828-52436847 Msa0124570:intron 30.0%
GCCATAGTTTCAATAATTTG+AGG - chr1_3:52436920-52436939 Msa0124570:intron 30.0%
CCCTCAAATTATTGAAACTA+TGG + chr1_3:52436924-52436943 None:intergenic 30.0%
ATGTAAGGTATAATGTGCAA+GGG + chr1_3:52437087-52437106 None:intergenic 30.0%
! TTCTTGTTGTATGAGTTGAA+TGG + chr1_3:52437321-52437340 None:intergenic 30.0%
GAAGATTTCATAGGTAAAGT+AGG + chr1_3:52437369-52437388 None:intergenic 30.0%
TCGGAATTTGAAGATTTCAT+AGG + chr1_3:52437378-52437397 None:intergenic 30.0%
GTCATTACATGGAAACATAA+AGG + chr1_3:52437640-52437659 None:intergenic 30.0%
TTAGAAGGAATAAACGTCTT+AGG - chr1_3:52437712-52437731 Msa0124570:intron 30.0%
!!! TGATTTTGATTCATCTGCTT+TGG - chr1_3:52437761-52437780 Msa0124570:intron 30.0%
AGGCCTTGATCTTAAAATAA+AGG - chr1_3:52437935-52437954 Msa0124570:intron 30.0%
GGCCTTGATCTTAAAATAAA+GGG - chr1_3:52437936-52437955 Msa0124570:intron 30.0%
!!! CACCCTTTATTTTAAGATCA+AGG + chr1_3:52437941-52437960 None:intergenic 30.0%
TGATCTTAAAATAAAGGGTG+TGG - chr1_3:52437941-52437960 Msa0124570:intron 30.0%
AGAAGAAAAGAAACCCAAAT+AGG - chr1_3:52437970-52437989 Msa0124570:intron 30.0%
TGAAGGAGAAACATTATTCA+TGG + chr1_3:52438324-52438343 None:intergenic 30.0%
!!! TACACCATGTTTTGAAAATC+AGG - chr1_3:52438352-52438371 Msa0124570:intron 30.0%
! CAAACCTGATTTTCAAAACA+TGG + chr1_3:52438359-52438378 None:intergenic 30.0%
TAATGTGGATTTGAAAACTC+AGG - chr1_3:52438832-52438851 Msa0124570:CDS 30.0%
! AATATTTGGTGGTAATGACA+GGG + chr1_3:52438927-52438946 None:intergenic 30.0%
TCATTACCACCAAATATTGA+AGG - chr1_3:52438929-52438948 Msa0124570:CDS 30.0%
ATATTGCCTTCAATATTTGG+TGG + chr1_3:52438938-52438957 None:intergenic 30.0%
! TAGTGGCTTTTTATAGTTCT+TGG - chr1_3:52439163-52439182 Msa0124570:intron 30.0%
! ATCATATTGATAGTTTGCCA+TGG - chr1_3:52439330-52439349 Msa0124570:intron 30.0%
GTAAAAGAGGTAAAATGTGA+AGG - chr1_3:52439499-52439518 Msa0124570:CDS 30.0%
AGTAGTAATATCCTTCACAA+TGG - chr1_3:52439679-52439698 Msa0124570:CDS 30.0%
AACTCAACAATCAAGATCAA+TGG - chr1_3:52439783-52439802 Msa0124570:CDS 30.0%
ACTCAACAATCAAGATCAAT+GGG - chr1_3:52439784-52439803 Msa0124570:CDS 30.0%
! AAAAGGACAAAGGAAAGTAT+TGG - chr1_3:52439868-52439887 Msa0124570:CDS 30.0%
ACAAATATCGAGAATGTAAG+TGG + chr1_3:52440045-52440064 None:intergenic 30.0%
! GAAAAAAAGTATGATGAGTC+AGG + chr1_3:52440533-52440552 None:intergenic 30.0%
GTCTTCTGCAATATTATCAA+TGG - chr1_3:52440630-52440649 Msa0124570:CDS 30.0%
CAAGAATGCTGTAATGAAAA+GGG + chr1_3:52440681-52440700 None:intergenic 30.0%
AAAATATAGTTCAAAGGGTG+TGG - chr1_3:52440856-52440875 Msa0124570:CDS 30.0%
AGATTACAAGGAAAAAAACG+AGG - chr1_3:52440939-52440958 Msa0124570:CDS 30.0%
CATAAAACAAGAGAAAACAG+AGG + chr1_3:52441316-52441335 None:intergenic 30.0%
!!! CTCTGTTTTCTCTTGTTTTA+TGG - chr1_3:52441314-52441333 Msa0124570:CDS 30.0%
CACCAAAAAACAAAAGATAG+AGG + chr1_3:52441369-52441388 None:intergenic 30.0%
AAAAGTGATATAGCGTAAAG+CGG + chr1_3:52441534-52441553 None:intergenic 30.0%
!! TTTACGCTATATCACTTTTG+TGG - chr1_3:52441535-52441554 Msa0124570:intron 30.0%
TGTCCAAAAAACATCAGATA+GGG + chr1_3:52441656-52441675 None:intergenic 30.0%
TTGTCCAAAAAACATCAGAT+AGG + chr1_3:52441657-52441676 None:intergenic 30.0%
!!! CTGATGTTTTTTGGACAATT+TGG - chr1_3:52441659-52441678 Msa0124570:intron 30.0%
TACAATGTGTTGTCAAATAG+TGG - chr1_3:52441805-52441824 Msa0124570:intron 30.0%
TTTATGAGTGGTACTATTTG+TGG - chr1_3:52442062-52442081 Msa0124570:intron 30.0%
CTTCATGTATCATAGAAAGA+TGG - chr1_3:52442147-52442166 Msa0124570:intron 30.0%
AAATATCATCGCTCAAATCA+TGG - chr1_3:52442294-52442313 Msa0124570:intron 30.0%
AAATCCATTTCATGGTCTAA+GGG + chr1_3:52442377-52442396 None:intergenic 30.0%
AAAATCCATTTCATGGTCTA+AGG + chr1_3:52442378-52442397 None:intergenic 30.0%
CCATTATTGTACTAGTATTG+AGG + chr1_3:52442463-52442482 None:intergenic 30.0%
CCTCAATACTAGTACAATAA+TGG - chr1_3:52442460-52442479 Msa0124570:intron 30.0%
! ATTTTTACTTGCAACTACAG+AGG - chr1_3:52442527-52442546 Msa0124570:intron 30.0%
! TTTTTACTTGCAACTACAGA+GGG - chr1_3:52442528-52442547 Msa0124570:intron 30.0%
!!! CTGTACTGTTTCCTTATTTT+TGG - chr1_3:52442833-52442852 Msa0124570:intron 30.0%
CAGAATTCACACATAAACTA+AGG - chr1_3:52443085-52443104 Msa0124570:intron 30.0%
ACCCTAGAATTTCTTAGATA+TGG + chr1_3:52443140-52443159 None:intergenic 30.0%
GGATAGTTATTGAATGGTTA+TGG + chr1_3:52443219-52443238 None:intergenic 30.0%
TAGAAACTAATTGGCAGTTA+TGG + chr1_3:52443306-52443325 None:intergenic 30.0%
! TAACTGCCAATTAGTTTCTA+AGG - chr1_3:52443306-52443325 Msa0124570:intron 30.0%
CTCTTTCCTTAGAAACTAAT+TGG + chr1_3:52443315-52443334 None:intergenic 30.0%
TGAACATGTGTTTATATGTG+GGG + chr1_3:52443516-52443535 None:intergenic 30.0%
CTGAACATGTGTTTATATGT+GGG + chr1_3:52443517-52443536 None:intergenic 30.0%
GACTCTCAAATTTCTTAGAT+AGG + chr1_3:52443593-52443612 None:intergenic 30.0%
TCTAAGAAATTTGAGAGTCT+TGG - chr1_3:52443594-52443613 Msa0124570:intron 30.0%
AAATGCTTACTAAAACATGC+TGG - chr1_3:52443753-52443772 Msa0124570:intron 30.0%
ACATACATGTTCCAAATTTG+AGG + chr1_3:52443913-52443932 None:intergenic 30.0%
ATGGCATCAAATAAAAGACA+TGG + chr1_3:52444039-52444058 None:intergenic 30.0%
AACATCCAAAGATATGCATA+TGG + chr1_3:52444058-52444077 None:intergenic 30.0%
TATGCATATCTTTGGATGTT+TGG - chr1_3:52444058-52444077 Msa0124570:CDS 30.0%
TATACTAAACAAACATCACC+TGG + chr1_3:52444312-52444331 None:intergenic 30.0%
!!! TTTTATAGGTTTTAAGGCTG+TGG - chr1_3:52444529-52444548 Msa0124570:intron 30.0%
TTATATAGTTCAGTTTCTGC+AGG - chr1_3:52444609-52444628 Msa0124570:intron 30.0%
TTCTATATTATCATCACTGC+TGG - chr1_3:52444746-52444765 Msa0124570:intron 30.0%
TCTATATTATCATCACTGCT+GGG - chr1_3:52444747-52444766 Msa0124570:intron 30.0%
!! TCATTTTCCAATGTTGATAG+AGG - chr1_3:52445037-52445056 Msa0124570:intron 30.0%
CGTACTGTATTTAATTCTAG+AGG - chr1_3:52445241-52445260 Msa0124570:intron 30.0%
ACCAAGAGTTAACAACTAAT+GGG - chr1_3:52445329-52445348 Msa0124570:intron 30.0%
TCAGAATGTCGATAATTTAC+TGG + chr1_3:52445541-52445560 None:intergenic 30.0%
GTAAATTATCGACATTCTGA+TGG - chr1_3:52445541-52445560 Msa0124570:intron 30.0%
!! ACAAAAGAAAACTGATTCGA+CGG + chr1_3:52445616-52445635 None:intergenic 30.0%
! ATCAGTTTTCTTTTGTTCAC+GGG - chr1_3:52445620-52445639 Msa0124570:intron 30.0%
ATATGATTATCGAGAGAGAT+GGG - chr1_3:52445771-52445790 Msa0124570:intron 30.0%
TCAATTATTCCAATCTTACC+GGG + chr1_3:52445814-52445833 None:intergenic 30.0%
!!! ATTGATGCTTATTTTGATGG+TGG - chr1_3:52445829-52445848 Msa0124570:intron 30.0%
AGAGGAAAAATAATGGTAAG+GGG + chr1_3:52446087-52446106 None:intergenic 30.0%
GGTGTAACCTTAACTTATTT+AGG - chr1_3:52446524-52446543 Msa0124570:intron 30.0%
GACACAACCTAAATAAGTTA+AGG + chr1_3:52446534-52446553 None:intergenic 30.0%
TAAATTATAGAATTTGGCGG+TGG + chr1_3:52446565-52446584 None:intergenic 30.0%
ACATTTCAGTGAATATTTCC+TGG - chr1_3:52446632-52446651 Msa0124570:intron 30.0%
TTCCTGGAATTGTTAATTGA+AGG - chr1_3:52446648-52446667 Msa0124570:intron 30.0%
TCCTGGAATTGTTAATTGAA+GGG - chr1_3:52446649-52446668 Msa0124570:intron 30.0%
! TGAGGTAATGCACATATTTT+TGG - chr1_3:52446898-52446917 Msa0124570:five_prime_UTR 30.0%
! GAGGTAATGCACATATTTTT+GGG - chr1_3:52446899-52446918 Msa0124570:five_prime_UTR 30.0%
CTTTCGCTAAAAGAATCAAA+CGG + chr1_3:52446984-52447003 None:intergenic 30.0%
!!! TACTGATTTTGAAGACTTTG+GGG + chr1_3:52447018-52447037 None:intergenic 30.0%
!!! GTACTGATTTTGAAGACTTT+GGG + chr1_3:52447019-52447038 None:intergenic 30.0%
!!! AGTACTGATTTTGAAGACTT+TGG + chr1_3:52447020-52447039 None:intergenic 30.0%
TCAATGCCTTTCAATTCCAT+AGG - chr1_3:52431552-52431571 Msa0124570:three_prime_UTR 35.0%
AACTGTGTTGAATTTGCCTA+TGG + chr1_3:52431571-52431590 None:intergenic 35.0%
AAATTGAATAGCAGTTACCG+TGG + chr1_3:52431788-52431807 None:intergenic 35.0%
ATGGTTACTGTAAACTCAAC+TGG - chr1_3:52432140-52432159 Msa0124570:three_prime_UTR 35.0%
TGGTTACTGTAAACTCAACT+GGG - chr1_3:52432141-52432160 Msa0124570:three_prime_UTR 35.0%
AGTGATTGTGAACTCAAATC+AGG + chr1_3:52432252-52432271 None:intergenic 35.0%
! GCTTGGTAATCCTGAAATTT+AGG - chr1_3:52432406-52432425 Msa0124570:intron 35.0%
! TCTTCTATGAGACTTTTTGG+GGG - chr1_3:52432442-52432461 Msa0124570:CDS 35.0%
GGGCAAGCAAATGATAATAA+TGG - chr1_3:52432462-52432481 Msa0124570:CDS 35.0%
CTTCAACTCAACTTTCAATC+CGG - chr1_3:52432682-52432701 Msa0124570:CDS 35.0%
TGAATGCAAACACACATTGA+TGG + chr1_3:52432712-52432731 None:intergenic 35.0%
TCAATGTGTGTTTGCATTCA+TGG - chr1_3:52432712-52432731 Msa0124570:CDS 35.0%
AAGCACTTTCTTCAAATCAG+TGG + chr1_3:52433096-52433115 None:intergenic 35.0%
CTGTTAGGCAGTGTTAAATA+AGG - chr1_3:52433299-52433318 Msa0124570:CDS 35.0%
TTATATCTCGGAGCTTAACT+TGG - chr1_3:52433341-52433360 Msa0124570:CDS 35.0%
TATATCTCGGAGCTTAACTT+GGG - chr1_3:52433342-52433361 Msa0124570:CDS 35.0%
CTTGGGTGATATGCTTATTA+TGG - chr1_3:52433359-52433378 Msa0124570:CDS 35.0%
GAGTCATCATACAATACATC+AGG - chr1_3:52433491-52433510 Msa0124570:CDS 35.0%
GTCATCATACAATACATCAG+GGG - chr1_3:52433493-52433512 Msa0124570:CDS 35.0%
! ACCAGATTTAGAATACCAGT+AGG - chr1_3:52433623-52433642 Msa0124570:CDS 35.0%
TCCTACTGGTATTCTAAATC+TGG + chr1_3:52433627-52433646 None:intergenic 35.0%
GGTAGTAGTAGAAAATACGA+TGG - chr1_3:52433755-52433774 Msa0124570:intron 35.0%
AAGACCCAATCAATAACCTA+AGG + chr1_3:52433952-52433971 None:intergenic 35.0%
TCTAACTGTCAATGCTCAAA+AGG + chr1_3:52434022-52434041 None:intergenic 35.0%
GTTCTGTAAGTTGTTCTGTT+AGG + chr1_3:52434226-52434245 None:intergenic 35.0%
ACTGTGTGAATTTATGCAGT+TGG + chr1_3:52434285-52434304 None:intergenic 35.0%
!! TCAGGTATCGACTTCTAATA+TGG + chr1_3:52434518-52434537 None:intergenic 35.0%
GAATTACAACTTAGCACTGT+TGG + chr1_3:52434674-52434693 None:intergenic 35.0%
TGAGCTTATGTATCTTGTTC+TGG + chr1_3:52434737-52434756 None:intergenic 35.0%
TGTCAAATCGTTACTGCATT+TGG - chr1_3:52434887-52434906 Msa0124570:intron 35.0%
TTCAATACTGTTGCCTGAAA+TGG - chr1_3:52435162-52435181 Msa0124570:intron 35.0%
CAAGTTAGGCTATCAAAAAG+TGG + chr1_3:52435232-52435251 None:intergenic 35.0%
ATTGGGTCAACAAAAGAACT+TGG + chr1_3:52435331-52435350 None:intergenic 35.0%
! GTTCTTTTGTTGACCCAATA+TGG - chr1_3:52435332-52435351 Msa0124570:intron 35.0%
TGCCAACAACAACTTCAAAT+AGG - chr1_3:52435516-52435535 Msa0124570:intron 35.0%
AAATCTTCTCGGTAAATGAG+GGG + chr1_3:52435656-52435675 None:intergenic 35.0%
CAAAATCTTCTCGGTAAATG+AGG + chr1_3:52435658-52435677 None:intergenic 35.0%
! CTCATTTACCGAGAAGATTT+TGG - chr1_3:52435656-52435675 Msa0124570:intron 35.0%
TTACAGTGTTAGTGGCATTT+AGG + chr1_3:52436046-52436065 None:intergenic 35.0%
! AGAAACAAAAAGGAAGTGTG+TGG + chr1_3:52436071-52436090 None:intergenic 35.0%
!! ACTTCCTTTTTGTTTCTCTG+TGG - chr1_3:52436074-52436093 Msa0124570:intron 35.0%
TATGCCACAGAGAAACAAAA+AGG + chr1_3:52436081-52436100 None:intergenic 35.0%
! TGATGGGTACCTAATAGATT+AGG - chr1_3:52436146-52436165 Msa0124570:intron 35.0%
TAACTATTTACCCACCCAAT+TGG + chr1_3:52436354-52436373 None:intergenic 35.0%
!!! ACTTGAGGTTTTGAACTGAT+TGG - chr1_3:52436645-52436664 Msa0124570:intron 35.0%
!!! CTTGAGGTTTTGAACTGATT+GGG - chr1_3:52436646-52436665 Msa0124570:intron 35.0%
!!! TTGAGGTTTTGAACTGATTG+GGG - chr1_3:52436647-52436666 Msa0124570:intron 35.0%
CTACTTCCTTCCCTTAAAAA+GGG + chr1_3:52436811-52436830 None:intergenic 35.0%
ACTACTTCCTTCCCTTAAAA+AGG + chr1_3:52436812-52436831 None:intergenic 35.0%
GTAGTTTAAACCAACCTGAT+AGG - chr1_3:52436827-52436846 Msa0124570:intron 35.0%
! TACTATCGTTTTACCCTATC+AGG + chr1_3:52436844-52436863 None:intergenic 35.0%
TAGGGTAAAACGATAGTATC+AGG - chr1_3:52436846-52436865 Msa0124570:intron 35.0%
! CTATTTCTTTGTTGGAGATC+TGG - chr1_3:52436886-52436905 Msa0124570:intron 35.0%
TCAATAATTTGAGGGCCTTA+TGG - chr1_3:52436929-52436948 Msa0124570:intron 35.0%
AACACAAAGAGTCTTCCATA+AGG + chr1_3:52436947-52436966 None:intergenic 35.0%
TGTAAGGTATAATGTGCAAG+GGG + chr1_3:52437086-52437105 None:intergenic 35.0%
GATGTAAGGTATAATGTGCA+AGG + chr1_3:52437088-52437107 None:intergenic 35.0%
!!! GAGAGATTGTTTTTTCTCCT+CGG + chr1_3:52437160-52437179 None:intergenic 35.0%
! AATTCCGATATTGATAGCCA+TGG - chr1_3:52437390-52437409 Msa0124570:intron 35.0%
! ATTCCGATATTGATAGCCAT+GGG - chr1_3:52437391-52437410 Msa0124570:intron 35.0%
! AGATGAATCTCATGATAACG+AGG - chr1_3:52437455-52437474 Msa0124570:intron 35.0%
! GAATGTTGCTTCTGTACATT+CGG - chr1_3:52437497-52437516 Msa0124570:intron 35.0%
TTTCGAGAAGAGTAAGTTAG+TGG + chr1_3:52437528-52437547 None:intergenic 35.0%
TACATGGAAACATAAAGGGT+TGG + chr1_3:52437635-52437654 None:intergenic 35.0%
ATGTTTCCATGTAATGACAG+TGG - chr1_3:52437642-52437661 Msa0124570:intron 35.0%
TTCTTTCCACTGTCATTACA+TGG + chr1_3:52437651-52437670 None:intergenic 35.0%
AAAGAAACCCAAATAGGAAG+AGG - chr1_3:52437976-52437995 Msa0124570:intron 35.0%
AAGAAACCCAAATAGGAAGA+GGG - chr1_3:52437977-52437996 Msa0124570:intron 35.0%
GGAATTTCTGCAAATGTTCT+GGG + chr1_3:52438075-52438094 None:intergenic 35.0%
AATAGCATTCTACATACTCC+AGG - chr1_3:52438194-52438213 Msa0124570:intron 35.0%
ATAGCATTCTACATACTCCA+GGG - chr1_3:52438195-52438214 Msa0124570:intron 35.0%
CATGGTGTACAATTCTTTGA+AGG + chr1_3:52438341-52438360 None:intergenic 35.0%
GATAGAAGATATACAGCATG+TGG + chr1_3:52438540-52438559 None:intergenic 35.0%
TGATCATTAATAGCCACATC+TGG + chr1_3:52438572-52438591 None:intergenic 35.0%
GTGGCTATTAATGATCATGA+AGG - chr1_3:52438575-52438594 Msa0124570:CDS 35.0%
GCTATTAATGATCATGAAGG+TGG - chr1_3:52438578-52438597 Msa0124570:CDS 35.0%
ATTTGAAAACTCAGGTGCAT+GGG - chr1_3:52438840-52438859 Msa0124570:CDS 35.0%
! CAATATTTGGTGGTAATGAC+AGG + chr1_3:52438928-52438947 None:intergenic 35.0%
TGGAATAAACCTTCATTCTG+TGG - chr1_3:52439006-52439025 Msa0124570:intron 35.0%
! TTTGAGGCGGATCAATATTA+GGG + chr1_3:52439060-52439079 None:intergenic 35.0%
!!! TTTTGAGGCGGATCAATATT+AGG + chr1_3:52439061-52439080 None:intergenic 35.0%
ATGACATGTAAGCTTAGTAG+TGG - chr1_3:52439146-52439165 Msa0124570:intron 35.0%
! ATATTGATAGTTTGCCATGG+TGG - chr1_3:52439333-52439352 Msa0124570:intron 35.0%
! CGTGACTGTTCTTTAATTTC+AGG - chr1_3:52439467-52439486 Msa0124570:CDS 35.0%
ACATTGCAAATTGACGTGTT+TGG + chr1_3:52439646-52439665 None:intergenic 35.0%
CACCAGAAACAAACTTTATC+TGG - chr1_3:52439727-52439746 Msa0124570:CDS 35.0%
! GACCAGATAAAGTTTGTTTC+TGG + chr1_3:52439732-52439751 None:intergenic 35.0%
TGAAAGTAAGTATGGATCTG+AGG - chr1_3:52439759-52439778 Msa0124570:CDS 35.0%
!! TTGTACTTTGAAGCAATGCT+TGG - chr1_3:52439838-52439857 Msa0124570:CDS 35.0%
!! TGTACTTTGAAGCAATGCTT+GGG - chr1_3:52439839-52439858 Msa0124570:CDS 35.0%
AAAGTTTGGCATTGCAGATA+AGG - chr1_3:52439921-52439940 Msa0124570:CDS 35.0%
ATGGAAGACTCAGATTTCAT+GGG + chr1_3:52440093-52440112 None:intergenic 35.0%
!! GGTATTGGTACAAAAAGCAT+GGG - chr1_3:52440246-52440265 Msa0124570:CDS 35.0%
ATTCACCTCGAGATCATATT+TGG + chr1_3:52440331-52440350 None:intergenic 35.0%
AAATATGATCTCGAGGTGAA+TGG - chr1_3:52440330-52440349 Msa0124570:CDS 35.0%
!!! TTGTTTCTGCATCCCAATTT+TGG - chr1_3:52440367-52440386 Msa0124570:CDS 35.0%
TGACAATGAGTGTTTAGGTA+TGG - chr1_3:52440414-52440433 Msa0124570:CDS 35.0%
GTTTAGGTATGGATTCCATA+AGG - chr1_3:52440425-52440444 Msa0124570:CDS 35.0%
TATCAAGACCAACAATTTGG+AGG - chr1_3:52440468-52440487 Msa0124570:CDS 35.0%
ATCAAGACCAACAATTTGGA+GGG - chr1_3:52440469-52440488 Msa0124570:CDS 35.0%
ATGATTGGGGAGGTAAAAAA+TGG + chr1_3:52440555-52440574 None:intergenic 35.0%
!!! AGTGTTTTTTATGATTGGGG+AGG + chr1_3:52440565-52440584 None:intergenic 35.0%
!! AACACTAAGTTGCTTTGAGA+TGG - chr1_3:52440579-52440598 Msa0124570:CDS 35.0%
GCAAGAATGCTGTAATGAAA+AGG + chr1_3:52440682-52440701 None:intergenic 35.0%
! TTACAGCATTCTTGCTGTAT+AGG - chr1_3:52440687-52440706 Msa0124570:CDS 35.0%
! CTTAAGATTCTATGGTGTTG+TGG + chr1_3:52440921-52440940 None:intergenic 35.0%
TGAACCATAGTAGTCAATAG+CGG - chr1_3:52441043-52441062 Msa0124570:CDS 35.0%
! ACCAAATTGACTCTGTTGTA+TGG - chr1_3:52441269-52441288 Msa0124570:CDS 35.0%
ACCATACAACAGAGTCAATT+TGG + chr1_3:52441273-52441292 None:intergenic 35.0%
TAAAGCGGTATGACAAATAG+CGG + chr1_3:52441519-52441538 None:intergenic 35.0%
TTGTCAATTGCAGATCATTG+TGG + chr1_3:52441589-52441608 None:intergenic 35.0%
GTCCAAAAAACATCAGATAG+GGG + chr1_3:52441655-52441674 None:intergenic 35.0%
! TATAGCTCTCTCTAGTTTAG+AGG - chr1_3:52441829-52441848 Msa0124570:intron 35.0%
!! TATTGGTGTTGCATAGTGTT+GGG - chr1_3:52441898-52441917 Msa0124570:intron 35.0%
TTCCCTAAACTTTGACATTG+TGG - chr1_3:52442100-52442119 Msa0124570:intron 35.0%
AGCCACAATGTCAAAGTTTA+GGG + chr1_3:52442105-52442124 None:intergenic 35.0%
!! TTTGGTGTCTATCCTTGTTA+TGG - chr1_3:52442235-52442254 Msa0124570:intron 35.0%
! TTTTCATTGCATTATGCACC+TGG - chr1_3:52442262-52442281 Msa0124570:intron 35.0%
GATTTGAGCGATGATATTTC+TGG + chr1_3:52442293-52442312 None:intergenic 35.0%
TCACTTGTACTGTAGAGAAA+TGG - chr1_3:52442723-52442742 Msa0124570:intron 35.0%
ACTTTGGTCTCACTTCAATA+AGG + chr1_3:52442927-52442946 None:intergenic 35.0%
TTATTGAAGTGAGACCAAAG+TGG - chr1_3:52442926-52442945 Msa0124570:intron 35.0%
TATTGAAGTGAGACCAAAGT+GGG - chr1_3:52442927-52442946 Msa0124570:intron 35.0%
ACATTATAACATGCCCACTT+TGG + chr1_3:52442943-52442962 None:intergenic 35.0%
AAAGTGGGCATGTTATAATG+TGG - chr1_3:52442942-52442961 Msa0124570:intron 35.0%
AAGTGGGCATGTTATAATGT+GGG - chr1_3:52442943-52442962 Msa0124570:intron 35.0%
!! AAGCTGAAAGTGTTAGAAAC+TGG - chr1_3:52442970-52442989 Msa0124570:intron 35.0%
ACAGAATTACACACACCATT+TGG - chr1_3:52443058-52443077 Msa0124570:intron 35.0%
TGTGAATTCTGCATTCCAAA+TGG + chr1_3:52443076-52443095 None:intergenic 35.0%
GGAAAGAGTCTACTATTACA+AGG - chr1_3:52443327-52443346 Msa0124570:intron 35.0%
!! GACTCTAGAATTTCTTCGAT+AGG + chr1_3:52443358-52443377 None:intergenic 35.0%
!! TCGAAGAAATTCTAGAGTCT+TGG - chr1_3:52443359-52443378 Msa0124570:intron 35.0%
! TCTCTCTCTCTCTCTAAAAA+AGG - chr1_3:52443412-52443431 Msa0124570:intron 35.0%
! CTCTCTCTCTCTCTAAAAAA+GGG - chr1_3:52443413-52443432 Msa0124570:intron 35.0%
TTGGTCTCTCTTAGAAATTG+TGG - chr1_3:52443442-52443461 Msa0124570:intron 35.0%
TCTCTCTTAGAAATTGTGGT+TGG - chr1_3:52443446-52443465 Msa0124570:intron 35.0%
CTCTCTTAGAAATTGTGGTT+GGG - chr1_3:52443447-52443466 Msa0124570:intron 35.0%
GAACATGTGTTTATATGTGG+GGG + chr1_3:52443515-52443534 None:intergenic 35.0%
CCTGAACATGTGTTTATATG+TGG + chr1_3:52443518-52443537 None:intergenic 35.0%
CCACATATAAACACATGTTC+AGG - chr1_3:52443515-52443534 Msa0124570:intron 35.0%
TACCAAGATTTCGAATGCTT+GGG + chr1_3:52443625-52443644 None:intergenic 35.0%
ATACCAAGATTTCGAATGCT+TGG + chr1_3:52443626-52443645 None:intergenic 35.0%
!!! AAGGCATTTTATTTTGGGAC+TGG + chr1_3:52443663-52443682 None:intergenic 35.0%
AACTCAATGAAACTCCAATG+TGG + chr1_3:52443860-52443879 None:intergenic 35.0%
TGATGCCATATGCATATCTT+TGG - chr1_3:52444050-52444069 Msa0124570:intron 35.0%
AAACTGAATCAAGTCTGCAT+CGG - chr1_3:52444119-52444138 Msa0124570:CDS 35.0%
! CAGTTTTCTCGAGGTTTAAA+AGG - chr1_3:52444178-52444197 Msa0124570:intron 35.0%
CAAACATCACCTGGAAAAAT+CGG + chr1_3:52444303-52444322 None:intergenic 35.0%
ACGATCATTAAGAACAGAGA+GGG - chr1_3:52444644-52444663 Msa0124570:intron 35.0%
TACCCTCCATTTCTCTTATA+GGG + chr1_3:52444680-52444699 None:intergenic 35.0%
ATACCCTCCATTTCTCTTAT+AGG + chr1_3:52444681-52444700 None:intergenic 35.0%
TCTTCATCTTTAAGCATTCG+AGG + chr1_3:52444842-52444861 None:intergenic 35.0%
AATGAAGAGAGTGATTCTGA+TGG - chr1_3:52444866-52444885 Msa0124570:intron 35.0%
TGTACTTCAGAATTATGCTC+AGG + chr1_3:52444914-52444933 None:intergenic 35.0%
TGATAAACACAGGCATATCT+TGG - chr1_3:52444952-52444971 Msa0124570:intron 35.0%
CATATCTTGGAAGATGTTGA+CGG - chr1_3:52444965-52444984 Msa0124570:intron 35.0%
TTCATTTCAACATCACGAGA+GGG + chr1_3:52445016-52445035 None:intergenic 35.0%
ATTCATTTCAACATCACGAG+AGG + chr1_3:52445017-52445036 None:intergenic 35.0%
GAATTAAATACAGTACGGCA+TGG + chr1_3:52445238-52445257 None:intergenic 35.0%
CACCAAGAGTTAACAACTAA+TGG - chr1_3:52445328-52445347 Msa0124570:intron 35.0%
ACCCATTAGTTGTTAACTCT+TGG + chr1_3:52445333-52445352 None:intergenic 35.0%
TGTCGATAATTTACTGGATG+CGG + chr1_3:52445535-52445554 None:intergenic 35.0%
! GTGTTACTATGCATGATAGA+GGG - chr1_3:52445563-52445582 Msa0124570:intron 35.0%
! TCAGTTTTCTTTTGTTCACG+GGG - chr1_3:52445621-52445640 Msa0124570:intron 35.0%
AAATGTTGCCTATTGGAGTA+AGG + chr1_3:52445688-52445707 None:intergenic 35.0%
CATCTCTCTCGATAATCATA+TGG + chr1_3:52445772-52445791 None:intergenic 35.0%
CATATGATTATCGAGAGAGA+TGG - chr1_3:52445770-52445789 Msa0124570:intron 35.0%
!!! TTTTTTATTGGGTAGGTCCT+AGG - chr1_3:52445893-52445912 Msa0124570:intron 35.0%
ATATCTTCGTCATGATACCT+AGG + chr1_3:52445913-52445932 None:intergenic 35.0%
ACTGGAATTGCATCTTCAAA+GGG + chr1_3:52446045-52446064 None:intergenic 35.0%
AACTGGAATTGCATCTTCAA+AGG + chr1_3:52446046-52446065 None:intergenic 35.0%
AATGAACCTCTGTTTGTAAC+TGG + chr1_3:52446063-52446082 None:intergenic 35.0%
GAGGAAAAATAATGGTAAGG+GGG + chr1_3:52446086-52446105 None:intergenic 35.0%
GGAAATTATGTTTGCATGTC+AGG - chr1_3:52446166-52446185 Msa0124570:intron 35.0%
GTATGCTTCTGATTAACTGT+CGG - chr1_3:52446237-52446256 Msa0124570:intron 35.0%
TATGCTTCTGATTAACTGTC+GGG - chr1_3:52446238-52446257 Msa0124570:intron 35.0%
CCACAAACACTAATAGTTGA+AGG + chr1_3:52446268-52446287 None:intergenic 35.0%
CCTTCAACTATTAGTGTTTG+TGG - chr1_3:52446265-52446284 Msa0124570:intron 35.0%
!! CTTTGTTTAGGAGGTGTTTA+TGG - chr1_3:52446347-52446366 Msa0124570:intron 35.0%
TTATGTTGAATCCTCCTCAA+AGG + chr1_3:52446398-52446417 None:intergenic 35.0%
TCCCTTCAATTAACAATTCC+AGG + chr1_3:52446653-52446672 None:intergenic 35.0%
ATGGGAGAATACAGTTGAAT+TGG + chr1_3:52446688-52446707 None:intergenic 35.0%
GGCTCAAACATCTAAAGAAT+TGG + chr1_3:52446775-52446794 None:intergenic 35.0%
ACAGTGGTTTGATATGCTTT+CGG - chr1_3:52446817-52446836 Msa0124570:exon 35.0%
TGGGATAAATGTCTTACTCA+CGG - chr1_3:52446918-52446937 Msa0124570:five_prime_UTR 35.0%
TCTCTCTCTCTCTCCAAATT+AGG - chr1_3:52431479-52431498 Msa0124570:three_prime_UTR 40.0%
CTCTCTCTCTCTCCAAATTA+GGG - chr1_3:52431480-52431499 Msa0124570:three_prime_UTR 40.0%
TGAGAAGAAAACAGTGTGTG+CGG + chr1_3:52431512-52431531 None:intergenic 40.0%
TTACTTCATCTGACCCATAG+CGG - chr1_3:52431629-52431648 Msa0124570:three_prime_UTR 40.0%
!! GTTTTTGGATTGCATGTTGG+TGG - chr1_3:52431864-52431883 Msa0124570:three_prime_UTR 40.0%
GGTTACTGTAAACTCAACTG+GGG - chr1_3:52432142-52432161 Msa0124570:three_prime_UTR 40.0%
!! AACTCAACTGGGGTTTTATC+TGG - chr1_3:52432152-52432171 Msa0124570:three_prime_UTR 40.0%
!! ACTCAACTGGGGTTTTATCT+GGG - chr1_3:52432153-52432172 Msa0124570:three_prime_UTR 40.0%
TGGATTGAAACGGTGACAAT+TGG - chr1_3:52432214-52432233 Msa0124570:intron 40.0%
TTCACAATCACTGTCTACCT+GGG - chr1_3:52432260-52432279 Msa0124570:exon 40.0%
!! TACTGATTCGTGCGAAAGTA+AGG + chr1_3:52432505-52432524 None:intergenic 40.0%
!! CGGATTGAAAGTTGAGTTGA+AGG + chr1_3:52432684-52432703 None:intergenic 40.0%
!! AACACACATTGATGGTGTTC+CGG + chr1_3:52432704-52432723 None:intergenic 40.0%
ATGTGTGTTTGCATTCATGG+TGG - chr1_3:52432715-52432734 Msa0124570:CDS 40.0%
!!! GATGCAAGAGAATTGGCTTT+TGG - chr1_3:52432953-52432972 Msa0124570:CDS 40.0%
!!! CTTTTCGAGTTTGTTGCTTG+TGG - chr1_3:52433039-52433058 Msa0124570:CDS 40.0%
! ATAGCTATGAACGTGCTGTT+AGG - chr1_3:52433284-52433303 Msa0124570:CDS 40.0%
GGGGACAATGCTTAATTACA+TGG - chr1_3:52433512-52433531 Msa0124570:CDS 40.0%
GGATTGAGAATGAATGAGAC+AGG + chr1_3:52433875-52433894 None:intergenic 40.0%
!! ATTGTTAATAGGGGTGCCTT+AGG - chr1_3:52433933-52433952 Msa0124570:CDS 40.0%
! GGTGCCTTAGGTTATTGATT+GGG - chr1_3:52433945-52433964 Msa0124570:intron 40.0%
TCTCCAGTAGACAGTAGTAA+TGG + chr1_3:52434084-52434103 None:intergenic 40.0%
AAATAGTCTAGCCTGCATTC+AGG - chr1_3:52434364-52434383 Msa0124570:CDS 40.0%
! GTTTCTCACTCTTTTCTCTC+AGG + chr1_3:52434536-52434555 None:intergenic 40.0%
ACTCTACTGTACTTCAGATG+CGG - chr1_3:52434824-52434843 Msa0124570:intron 40.0%
CATTTGGCAAAGTCATAACC+TGG - chr1_3:52434903-52434922 Msa0124570:intron 40.0%
AATTCAAATCTGACGGAACC+AGG + chr1_3:52434924-52434943 None:intergenic 40.0%
!! AGCTTATGATGGACCATTTC+AGG + chr1_3:52435178-52435197 None:intergenic 40.0%
ATCATAAGCTTGCCCATGAA+GGG - chr1_3:52435188-52435207 Msa0124570:intron 40.0%
GCTTGTATCTTTGCTGATGT+CGG - chr1_3:52435274-52435293 Msa0124570:intron 40.0%
CTTGCAAACAAAAGAGACAC+TGG - chr1_3:52435298-52435317 Msa0124570:intron 40.0%
AACAAAAGAGACACTGGAGT+AGG - chr1_3:52435304-52435323 Msa0124570:intron 40.0%
ACAAAAGAGACACTGGAGTA+GGG - chr1_3:52435305-52435324 Msa0124570:intron 40.0%
! GAATGGAGTTTTGCAATCGA+AGG + chr1_3:52435412-52435431 None:intergenic 40.0%
GATTGCAAAACTCCATTCTG+AGG - chr1_3:52435414-52435433 Msa0124570:intron 40.0%
!! AAAACTCCATTCTGAGGTCA+TGG - chr1_3:52435420-52435439 Msa0124570:intron 40.0%
CATTTCCATCATGGTAACCT+TGG + chr1_3:52435495-52435514 None:intergenic 40.0%
TGTTGGCATCATTTCCATCA+TGG + chr1_3:52435504-52435523 None:intergenic 40.0%
ATACACCCAACTTTCTTTGG+CGG - chr1_3:52435590-52435609 Msa0124570:intron 40.0%
GGGCTTAGGGAAATAAAGAA+CGG + chr1_3:52435636-52435655 None:intergenic 40.0%
TCCTAAGTGAAGCTGCATAT+AGG - chr1_3:52435853-52435872 Msa0124570:intron 40.0%
! TAGTTTGTCAAGCTAACCCT+TGG - chr1_3:52435956-52435975 Msa0124570:intron 40.0%
AGTTTGTCAAGCTAACCCTT+GGG - chr1_3:52435957-52435976 Msa0124570:intron 40.0%
CACAAATACACTAACCCCAA+GGG + chr1_3:52435975-52435994 None:intergenic 40.0%
TTAGTGGCATTTAGGAAAGG+CGG + chr1_3:52436038-52436057 None:intergenic 40.0%
GTGTTAGTGGCATTTAGGAA+AGG + chr1_3:52436041-52436060 None:intergenic 40.0%
GAAGAGAACTAAAGCTAGGT+TGG + chr1_3:52436114-52436133 None:intergenic 40.0%
GAAGGATGGCCTAATCTATT+AGG + chr1_3:52436158-52436177 None:intergenic 40.0%
CTGCACTTTGTTAAGAAGGA+TGG + chr1_3:52436172-52436191 None:intergenic 40.0%
ATCTTAGTCGCAAGTAGGAA+AGG + chr1_3:52436257-52436276 None:intergenic 40.0%
! TGCATTTTTGATGAGTGAGC+TGG - chr1_3:52436527-52436546 Msa0124570:intron 40.0%
GGTTTCAATAGCTGCATTTG+AGG - chr1_3:52436555-52436574 Msa0124570:intron 40.0%
CATCTGGTTATGCATACTTG+AGG - chr1_3:52436630-52436649 Msa0124570:intron 40.0%
!!! TGAGGTTTTGAACTGATTGG+GGG - chr1_3:52436648-52436667 Msa0124570:intron 40.0%
! ATCGTTTTACCCTATCAGGT+TGG + chr1_3:52436840-52436859 None:intergenic 40.0%
GGTAAAACGATAGTATCAGG+AGG - chr1_3:52436849-52436868 Msa0124570:intron 40.0%
TGGAGATCTGGTTGAAAAAG+TGG - chr1_3:52436898-52436917 Msa0124570:intron 40.0%
GTAAGGTATAATGTGCAAGG+GGG + chr1_3:52437085-52437104 None:intergenic 40.0%
CTGCACACACAAAAGATGTA+AGG + chr1_3:52437102-52437121 None:intergenic 40.0%
CAACCCATGGCTATCAATAT+CGG + chr1_3:52437397-52437416 None:intergenic 40.0%
! TCATGATAACGAGGCATCAA+AGG - chr1_3:52437464-52437483 Msa0124570:intron 40.0%
TATCTGTTATGAAGCCCTGT+GGG + chr1_3:52437572-52437591 None:intergenic 40.0%
GAGCTTCTATTCTTTCGTAC+TGG + chr1_3:52437603-52437622 None:intergenic 40.0%
AATGACAGTGGAAAGAATGC+TGG - chr1_3:52437654-52437673 Msa0124570:intron 40.0%
TCATTACAACCAGCAAGATC+AGG + chr1_3:52437744-52437763 None:intergenic 40.0%
!! TCATCTGCTTTGGTCTTGAA+TGG - chr1_3:52437771-52437790 Msa0124570:intron 40.0%
!! TTTGGTCTTGAATGGTAGCA+TGG - chr1_3:52437779-52437798 Msa0124570:intron 40.0%
TTTGAATGAGGGTAGTGCAA+TGG - chr1_3:52437854-52437873 Msa0124570:intron 40.0%
! TTCAGGGCATTCACTAGTTT+CGG + chr1_3:52437898-52437917 None:intergenic 40.0%
TGTTCAGCTCAACTTCTTCA+GGG + chr1_3:52437914-52437933 None:intergenic 40.0%
TTGTTCAGCTCAACTTCTTC+AGG + chr1_3:52437915-52437934 None:intergenic 40.0%
GAAGAAGTTGAGCTGAACAA+AGG - chr1_3:52437915-52437934 Msa0124570:intron 40.0%
!! AATGTTCTGGGAACTTTGAC+TGG + chr1_3:52438063-52438082 None:intergenic 40.0%
CGGAATTTCTGCAAATGTTC+TGG + chr1_3:52438076-52438095 None:intergenic 40.0%
! TTGCTCAAAGCATCTCTCTT+CGG + chr1_3:52438096-52438115 None:intergenic 40.0%
AAACGATGGAGAGTCAGAAT+GGG - chr1_3:52438143-52438162 Msa0124570:intron 40.0%
GGTAAATCATCTTCCACAGA+GGG - chr1_3:52438164-52438183 Msa0124570:intron 40.0%
! CATTATTCATGGTGCCAATC+AGG + chr1_3:52438313-52438332 None:intergenic 40.0%
AGATCAAACATTCTGCTCTG+TGG - chr1_3:52438391-52438410 Msa0124570:intron 40.0%
GGCAATTGATGTCATTCTTG+AGG + chr1_3:52438519-52438538 None:intergenic 40.0%
TATCAAGACAAGTCCAGATG+TGG - chr1_3:52438556-52438575 Msa0124570:CDS 40.0%
ACATTCTTGCCAGTTTCTTG+TGG + chr1_3:52438752-52438771 None:intergenic 40.0%
CAATTTGATCTGCAGCACAT+TGG + chr1_3:52438778-52438797 None:intergenic 40.0%
TGTTAGTCACACTGCTAATG+TGG - chr1_3:52438817-52438836 Msa0124570:CDS 40.0%
GATTTGAAAACTCAGGTGCA+TGG - chr1_3:52438839-52438858 Msa0124570:CDS 40.0%
TTTGAAAACTCAGGTGCATG+GGG - chr1_3:52438841-52438860 Msa0124570:CDS 40.0%
TCCAATACATCAGAGCACAA+TGG - chr1_3:52438986-52439005 Msa0124570:intron 40.0%
TCCATTGTGCTCTGATGTAT+TGG + chr1_3:52438990-52439009 None:intergenic 40.0%
TTGAGGCGGATCAATATTAG+GGG + chr1_3:52439059-52439078 None:intergenic 40.0%
TATTGATCCGCCTCAAAATG+AGG - chr1_3:52439063-52439082 Msa0124570:intron 40.0%
! GAAACACCAACCTCATTTTG+AGG + chr1_3:52439076-52439095 None:intergenic 40.0%
!! AAATGAGGTTGGTGTTTCTG+AGG - chr1_3:52439078-52439097 Msa0124570:intron 40.0%
!! AATGAGGTTGGTGTTTCTGA+GGG - chr1_3:52439079-52439098 Msa0124570:intron 40.0%
ACTTTACTAGGATTCCACCA+TGG + chr1_3:52439350-52439369 None:intergenic 40.0%
ACAGAATTCAAATCCTCCTC+TGG + chr1_3:52439526-52439545 None:intergenic 40.0%
TGTTTCAACATCTGACTGTC+TGG - chr1_3:52439543-52439562 Msa0124570:CDS 40.0%
GTTTCAACATCTGACTGTCT+GGG - chr1_3:52439544-52439563 Msa0124570:CDS 40.0%
TTGCAAATTGACGTGTTTGG+AGG + chr1_3:52439643-52439662 None:intergenic 40.0%
GACTACAACTTCCATTGTGA+AGG + chr1_3:52439693-52439712 None:intergenic 40.0%
TTCTGGTGCAAATGTACATC+AGG + chr1_3:52439715-52439734 None:intergenic 40.0%
CCATACTTACTTTCATCGAC+AGG + chr1_3:52439754-52439773 None:intergenic 40.0%
CCTGTCGATGAAAGTAAGTA+TGG - chr1_3:52439751-52439770 Msa0124570:CDS 40.0%
AATGGGTAAGTCAACTGAAG+CGG - chr1_3:52439801-52439820 Msa0124570:CDS 40.0%
CAATGCTTGGGACATTGAAA+AGG - chr1_3:52439851-52439870 Msa0124570:CDS 40.0%
TGGGACATTGAAAAGGACAA+AGG - chr1_3:52439858-52439877 Msa0124570:CDS 40.0%
! GCTATTGACTGTGCAAAGTT+TGG - chr1_3:52439907-52439926 Msa0124570:CDS 40.0%
CTCAGATTTCATGGGATCAA+TGG + chr1_3:52440085-52440104 None:intergenic 40.0%
CATGGAAGACTCAGATTTCA+TGG + chr1_3:52440094-52440113 None:intergenic 40.0%
AGGACTGAGATAGGAAATAC+AGG + chr1_3:52440189-52440208 None:intergenic 40.0%
! TGCTGTGTTTCCATTTTGAG+AGG - chr1_3:52440216-52440235 Msa0124570:CDS 40.0%
!! TTCCATTTTGAGAGGAAGAC+AGG - chr1_3:52440224-52440243 Msa0124570:CDS 40.0%
!! TCCATTTTGAGAGGAAGACA+GGG - chr1_3:52440225-52440244 Msa0124570:CDS 40.0%
!! GGGTATTGGTACAAAAAGCA+TGG - chr1_3:52440245-52440264 Msa0124570:CDS 40.0%
ATAGCAGCGCTATAGAATAG+CGG - chr1_3:52440721-52440740 Msa0124570:CDS 40.0%
GTGGCTATATATAGAGTGAG+TGG - chr1_3:52440804-52440823 Msa0124570:CDS 40.0%
GCTATATATAGAGTGAGTGG+TGG - chr1_3:52440807-52440826 Msa0124570:CDS 40.0%
! TAGATAGCGCTCTAGTTTAG+AGG - chr1_3:52441016-52441035 Msa0124570:CDS 40.0%
TGAGATAGCAGTTGCTATAG+CGG - chr1_3:52441122-52441141 Msa0124570:CDS 40.0%
!! CGCTATATCACTTTTGTGGT+CGG - chr1_3:52441539-52441558 Msa0124570:intron 40.0%
TTGCAGATCATTGTGGATCT+CGG + chr1_3:52441582-52441601 None:intergenic 40.0%
ATTGACAATGTTGTGCTGTG+CGG - chr1_3:52441601-52441620 Msa0124570:intron 40.0%
! AACCACTACTGACTACAGTA+CGG + chr1_3:52441868-52441887 None:intergenic 40.0%
ACACTATGCAACACCAATAG+TGG + chr1_3:52441897-52441916 None:intergenic 40.0%
!! CTATTGGTGTTGCATAGTGT+TGG - chr1_3:52441897-52441916 Msa0124570:intron 40.0%
!! ATTGGTGTTGCATAGTGTTG+GGG - chr1_3:52441899-52441918 Msa0124570:intron 40.0%
CAGCCACAATGTCAAAGTTT+AGG + chr1_3:52442106-52442125 None:intergenic 40.0%
ATTGCATTATGCACCTGGTA+TGG - chr1_3:52442267-52442286 Msa0124570:intron 40.0%
!! ATGATATTTCTGGCCATACC+AGG + chr1_3:52442283-52442302 None:intergenic 40.0%
AACTCCCTTAGACCATGAAA+TGG - chr1_3:52442370-52442389 Msa0124570:intron 40.0%
! TAGTACAATAATGGGACCCT+TGG - chr1_3:52442469-52442488 Msa0124570:intron 40.0%
CTCTACAGTACAAGTGAAAC+CGG + chr1_3:52442720-52442739 None:intergenic 40.0%
! CTTTGGTCTTCACGTCAATA+AGG + chr1_3:52442778-52442797 None:intergenic 40.0%
AATCTCTTGAACTCTTGGCA+GGG + chr1_3:52443176-52443195 None:intergenic 40.0%
AGACCAATCTCTTGAACTCT+TGG + chr1_3:52443181-52443200 None:intergenic 40.0%
TTGAATGGTTATGGGAGAGA+GGG + chr1_3:52443210-52443229 None:intergenic 40.0%
ATTGAATGGTTATGGGAGAG+AGG + chr1_3:52443211-52443230 None:intergenic 40.0%
! TCTCTCTCTCTAAAAAAGGG+AGG - chr1_3:52443416-52443435 Msa0124570:intron 40.0%
! CTCTAAAAAAGGGAGGAGAT+TGG - chr1_3:52443423-52443442 Msa0124570:intron 40.0%
TAGAACTCAAGCTTTCGGTT+AGG + chr1_3:52443836-52443855 None:intergenic 40.0%
GTGGTTAGAACTCAAGCTTT+CGG + chr1_3:52443841-52443860 None:intergenic 40.0%
! AGCTTGAGTTCTAACCACAT+TGG - chr1_3:52443843-52443862 Msa0124570:intron 40.0%
TTGGATGTTTGGCGTATTAC+AGG - chr1_3:52444069-52444088 Msa0124570:CDS 40.0%
! TCTATTGCACAGTTTTCTCG+AGG - chr1_3:52444169-52444188 Msa0124570:intron 40.0%
! CTAAGATGTCCGATTTTTCC+AGG - chr1_3:52444291-52444310 Msa0124570:intron 40.0%
TTGCCTTAAGACATTGCCTA+CGG + chr1_3:52444410-52444429 None:intergenic 40.0%
!!! ATAGGTTTTAAGGCTGTGGT+TGG - chr1_3:52444533-52444552 Msa0124570:intron 40.0%
AATCCAATTCCCGGATATGA+TGG + chr1_3:52444590-52444609 None:intergenic 40.0%
GACGATCATTAAGAACAGAG+AGG - chr1_3:52444643-52444662 Msa0124570:intron 40.0%
ATTAAGAACAGAGAGGGCTT+TGG - chr1_3:52444650-52444669 Msa0124570:intron 40.0%
GGATGACCCTATAAGAGAAA+TGG - chr1_3:52444671-52444690 Msa0124570:intron 40.0%
TGACCCTATAAGAGAAATGG+AGG - chr1_3:52444674-52444693 Msa0124570:intron 40.0%
GACCCTATAAGAGAAATGGA+GGG - chr1_3:52444675-52444694 Msa0124570:intron 40.0%
GGTATGCATGTTGACGAATA+TGG - chr1_3:52444696-52444715 Msa0124570:intron 40.0%
TGCATGTTGACGAATATGGA+AGG - chr1_3:52444700-52444719 Msa0124570:intron 40.0%
AACTCAAGTTTGCAGTTACC+TGG - chr1_3:52444806-52444825 Msa0124570:intron 40.0%
! TTCTGATGGAGGCAATTTTG+AGG - chr1_3:52444880-52444899 Msa0124570:intron 40.0%
GGCATTTCCTCTATCAACAT+TGG + chr1_3:52445047-52445066 None:intergenic 40.0%
GATGAAACAAGATGTGGCAT+AGG + chr1_3:52445205-52445224 None:intergenic 40.0%
GAGGTAGATGAAACAAGATG+TGG + chr1_3:52445211-52445230 None:intergenic 40.0%
TAGAGGTCATACAGAATCAC+AGG - chr1_3:52445258-52445277 Msa0124570:intron 40.0%
! TAATGGGTGTCCTTTCTACT+TGG - chr1_3:52445345-52445364 Msa0124570:intron 40.0%
TGCAAAAGGACCAAGTAGAA+AGG + chr1_3:52445358-52445377 None:intergenic 40.0%
GCACTGCATTACTAATAGGT+TGG + chr1_3:52445441-52445460 None:intergenic 40.0%
TGGTGCACTGCATTACTAAT+AGG + chr1_3:52445445-52445464 None:intergenic 40.0%
TGTGTGCTTCCCTATATTCT+GGG + chr1_3:52445474-52445493 None:intergenic 40.0%
ATGTGTGCTTCCCTATATTC+TGG + chr1_3:52445475-52445494 None:intergenic 40.0%
AATTTACTGGATGCGGTACA+GGG + chr1_3:52445528-52445547 None:intergenic 40.0%
TAATTTACTGGATGCGGTAC+AGG + chr1_3:52445529-52445548 None:intergenic 40.0%
!! GGTGTTACTATGCATGATAG+AGG - chr1_3:52445562-52445581 Msa0124570:intron 40.0%
!! ATGATAGAGGGCACTCTATA+AGG - chr1_3:52445575-52445594 Msa0124570:intron 40.0%
TCTCGATAATCATATGGAGG+CGG + chr1_3:52445766-52445785 None:intergenic 40.0%
CTCTCTCGATAATCATATGG+AGG + chr1_3:52445769-52445788 None:intergenic 40.0%
ATTCCAATCTTACCGGGATA+AGG + chr1_3:52445808-52445827 None:intergenic 40.0%
AAGATATGCCTTCCCCATAT+GGG - chr1_3:52445926-52445945 Msa0124570:intron 40.0%
TGTTCCTGTGATTCATTGAC+CGG + chr1_3:52446005-52446024 None:intergenic 40.0%
TCTTCAAAGGGTGGTCTAAA+TGG + chr1_3:52446033-52446052 None:intergenic 40.0%
GCAATTCCAGTTACAAACAG+AGG - chr1_3:52446054-52446073 Msa0124570:intron 40.0%
ATCCTTGGTTACTATCACCT+GGG + chr1_3:52446208-52446227 None:intergenic 40.0%
! AATCAGAAGCATACCAGACT+TGG + chr1_3:52446231-52446250 None:intergenic 40.0%
GTATACCTAGCAATCAAGGA+GGG + chr1_3:52446302-52446321 None:intergenic 40.0%
TGTATACCTAGCAATCAAGG+AGG + chr1_3:52446303-52446322 None:intergenic 40.0%
! CTAGGTATACAGCCTCTTTT+CGG - chr1_3:52446312-52446331 Msa0124570:intron 40.0%
GGATTCAACATAATCTGCAC+AGG - chr1_3:52446405-52446424 Msa0124570:intron 40.0%
TACCCAGGCAAACAATGTAT+GGG + chr1_3:52446706-52446725 None:intergenic 40.0%
ATACCCAGGCAAACAATGTA+TGG + chr1_3:52446707-52446726 None:intergenic 40.0%
ACATTGTTTGCCTGGGTATT+TGG - chr1_3:52446708-52446727 Msa0124570:CDS 40.0%
GTATTTGGTATGCCAACTCA+AGG - chr1_3:52446723-52446742 Msa0124570:CDS 40.0%
AAGAATTGGCAACCACTAAC+AGG + chr1_3:52446761-52446780 None:intergenic 40.0%
CTTCTTGCATAAAACCGTGT+GGG - chr1_3:52446794-52446813 Msa0124570:CDS 40.0%
ATAAATGTCTTACTCACGGC+CGG - chr1_3:52446922-52446941 Msa0124570:five_prime_UTR 40.0%
AAAGAATCAAACGGCTGCAA+AGG + chr1_3:52446975-52446994 None:intergenic 40.0%
! GATTTTGTGCTAAGCGCAAG+TGG + chr1_3:52431439-52431458 None:intergenic 45.0%
GTGCGGAGAAAACCCTAATT+TGG + chr1_3:52431495-52431514 None:intergenic 45.0%
! CTTTACTGCCTCCTTTTCTC+CGG + chr1_3:52431681-52431700 None:intergenic 45.0%
AAAAGGAGGCAGTAAAGCAG+CGG - chr1_3:52431684-52431703 Msa0124570:three_prime_UTR 45.0%
AAGTTAAAGGCTTCCCTGCA+TGG - chr1_3:52431758-52431777 Msa0124570:three_prime_UTR 45.0%
!! CTCAACTGGGGTTTTATCTG+GGG - chr1_3:52432154-52432173 Msa0124570:three_prime_UTR 45.0%
GTTCACAATCACTGTCTACC+TGG - chr1_3:52432259-52432278 Msa0124570:exon 45.0%
TCACAATCACTGTCTACCTG+GGG - chr1_3:52432261-52432280 Msa0124570:exon 45.0%
TTCGCACGAATCAGTAGTGA+AGG - chr1_3:52432509-52432528 Msa0124570:CDS 45.0%
TCGCACGAATCAGTAGTGAA+GGG - chr1_3:52432510-52432529 Msa0124570:CDS 45.0%
! TGTTTGCATTCATGGTGGAG+AGG - chr1_3:52432720-52432739 Msa0124570:CDS 45.0%
!! AAACTAGGCTTGAGTTGGCT+TGG + chr1_3:52433227-52433246 None:intergenic 45.0%
CGCTTAAACTAGGCTTGAGT+TGG + chr1_3:52433232-52433251 None:intergenic 45.0%
GGGTGCCTTAGGTTATTGAT+TGG - chr1_3:52433944-52433963 Msa0124570:intron 45.0%
TGGCCATTACTACTGTCTAC+TGG - chr1_3:52434078-52434097 Msa0124570:CDS 45.0%
TCACACAGTCTAACATTCGC+TGG - chr1_3:52434296-52434315 Msa0124570:CDS 45.0%
! TCTCCATGTTTTCCGCCAAA+AGG - chr1_3:52434440-52434459 Msa0124570:intron 45.0%
! CTCCATGTTTTCCGCCAAAA+GGG - chr1_3:52434441-52434460 Msa0124570:intron 45.0%
AACTAGCAACGGTAACCACA+TGG - chr1_3:52434703-52434722 Msa0124570:intron 45.0%
AGGACTCGAACCAAGAAAAG+TGG - chr1_3:52435105-52435124 Msa0124570:intron 45.0%
CTTCATGGGCAAGCTTATGA+TGG + chr1_3:52435189-52435208 None:intergenic 45.0%
CATCATAAGCTTGCCCATGA+AGG - chr1_3:52435187-52435206 Msa0124570:intron 45.0%
CAGATGCCGTTGGAAAACAT+TGG + chr1_3:52435375-52435394 None:intergenic 45.0%
AACATTGCAACAGATGCCGT+TGG + chr1_3:52435385-52435404 None:intergenic 45.0%
TTCCATCATGGTAACCTTGG+AGG + chr1_3:52435492-52435511 None:intergenic 45.0%
GCAGCTTCACTTAGGATTGT+AGG + chr1_3:52435849-52435868 None:intergenic 45.0%
GCCTATATGCAGCTTCACTT+AGG + chr1_3:52435857-52435876 None:intergenic 45.0%
CTTCCTGCTTTGACAAACAC+TGG - chr1_3:52435929-52435948 Msa0124570:intron 45.0%
CAACCAGTGTTTGTCAAAGC+AGG + chr1_3:52435935-52435954 None:intergenic 45.0%
GTTTGTCAAGCTAACCCTTG+GGG - chr1_3:52435958-52435977 Msa0124570:intron 45.0%
GCACAAATACACTAACCCCA+AGG + chr1_3:52435976-52435995 None:intergenic 45.0%
GTGTGGAGTTACAGTGTTAG+TGG + chr1_3:52436054-52436073 None:intergenic 45.0%
! CCTTCCTTAAGCCTTGTGAT+GGG - chr1_3:52436226-52436245 Msa0124570:intron 45.0%
! CTTCCTTAAGCCTTGTGATG+GGG - chr1_3:52436227-52436246 Msa0124570:intron 45.0%
TCCTACTTGCGACTAAGATG+AGG - chr1_3:52436258-52436277 Msa0124570:intron 45.0%
TTTGATGAGTGAGCTGGAGT+AGG - chr1_3:52436533-52436552 Msa0124570:intron 45.0%
TTGATGAGTGAGCTGGAGTA+GGG - chr1_3:52436534-52436553 Msa0124570:intron 45.0%
GCACAGTCTTGAACAACATC+TGG - chr1_3:52436614-52436633 Msa0124570:intron 45.0%
GTGTTGCAATGTAGACTGCT+AGG - chr1_3:52436962-52436981 Msa0124570:intron 45.0%
GTAAATGCTTCGACATCAGC+AGG + chr1_3:52437138-52437157 None:intergenic 45.0%
! TGATGTCGAAGCATTTACCG+AGG - chr1_3:52437140-52437159 Msa0124570:intron 45.0%
CAATCTCTCGTCAAACGTCA+AGG - chr1_3:52437171-52437190 Msa0124570:intron 45.0%
TCTCGTCAAACGTCAAGGAA+AGG - chr1_3:52437176-52437195 Msa0124570:intron 45.0%
CTCGTCAAACGTCAAGGAAA+GGG - chr1_3:52437177-52437196 Msa0124570:intron 45.0%
TGACTTTGTTCGTGCTGTGA+AGG - chr1_3:52437203-52437222 Msa0124570:intron 45.0%
! CAACTTGGTGAAGCTAACTG+TGG - chr1_3:52437264-52437283 Msa0124570:intron 45.0%
GGTAAAGTAGGCGATAAAGC+AGG + chr1_3:52437357-52437376 None:intergenic 45.0%
! CGATATTGATAGCCATGGGT+TGG - chr1_3:52437395-52437414 Msa0124570:intron 45.0%
ATCTGTTATGAAGCCCTGTG+GGG + chr1_3:52437571-52437590 None:intergenic 45.0%
CTATCTGTTATGAAGCCCTG+TGG + chr1_3:52437573-52437592 None:intergenic 45.0%
CACAGGGCTTCATAACAGAT+AGG - chr1_3:52437571-52437590 Msa0124570:intron 45.0%
CAATTAACCAATGCAGCCCA+GGG - chr1_3:52437681-52437700 Msa0124570:intron 45.0%
AGGAAATCACCTGATCTTGC+TGG - chr1_3:52437732-52437751 Msa0124570:intron 45.0%
TGGTTGCCCTCTTCCTATTT+GGG + chr1_3:52437986-52438005 None:intergenic 45.0%
TTGGTTGCCCTCTTCCTATT+TGG + chr1_3:52437987-52438006 None:intergenic 45.0%
!! GGTTGGCTTGGAAGTATCAT+TGG + chr1_3:52438006-52438025 None:intergenic 45.0%
! CTCAACTCTAATGGTTGGCT+TGG + chr1_3:52438018-52438037 None:intergenic 45.0%
CAAGCCAACCATTAGAGTTG+AGG - chr1_3:52438016-52438035 Msa0124570:intron 45.0%
TCCTCCTCAACTCTAATGGT+TGG + chr1_3:52438023-52438042 None:intergenic 45.0%
AGGTTCCTCCTCAACTCTAA+TGG + chr1_3:52438027-52438046 None:intergenic 45.0%
ATTAGAGTTGAGGAGGAACC+TGG - chr1_3:52438026-52438045 Msa0124570:intron 45.0%
! GAGAGATGCTTTGAGCAAGA+TGG - chr1_3:52438098-52438117 Msa0124570:intron 45.0%
ACTCTCCATCGTTTCACAAG+GGG + chr1_3:52438137-52438156 None:intergenic 45.0%
GACTCTCCATCGTTTCACAA+GGG + chr1_3:52438138-52438157 None:intergenic 45.0%
TGACTCTCCATCGTTTCACA+AGG + chr1_3:52438139-52438158 None:intergenic 45.0%
GAAACGATGGAGAGTCAGAA+TGG - chr1_3:52438142-52438161 Msa0124570:intron 45.0%
GGGTAAATCATCTTCCACAG+AGG - chr1_3:52438163-52438182 Msa0124570:intron 45.0%
TACTCCAGGGAAAAGCTGTA+AGG - chr1_3:52438208-52438227 Msa0124570:intron 45.0%
! TCTTCCTTACAGCTTTTCCC+TGG + chr1_3:52438215-52438234 None:intergenic 45.0%
TTGGAGGAAGCTATCATCTG+CGG + chr1_3:52438251-52438270 None:intergenic 45.0%
GCTTCCTCCAATTGTGAGAA+TGG - chr1_3:52438260-52438279 Msa0124570:intron 45.0%
TCCTCCAATTGTGAGAATGG+AGG - chr1_3:52438263-52438282 Msa0124570:intron 45.0%
AGAGCCTCCATTCTCACAAT+TGG + chr1_3:52438270-52438289 None:intergenic 45.0%
TTCAGCAGCATTAGCTGACA+TGG + chr1_3:52438468-52438487 None:intergenic 45.0%
TCAGCTAATGCTGCTGAAGA+AGG - chr1_3:52438470-52438489 Msa0124570:intron 45.0%
TTGCAAAAGTTCGATGCCTG+TGG - chr1_3:52438611-52438630 Msa0124570:CDS 45.0%
TCACATCTGCCACAGAATGA+AGG + chr1_3:52439018-52439037 None:intergenic 45.0%
!! ACACCAACCTCATTTTGAGG+CGG + chr1_3:52439073-52439092 None:intergenic 45.0%
CTGTTGACATCATCTACTGC+TGG + chr1_3:52439121-52439140 None:intergenic 45.0%
GGTAAAATGTGAAGGACCAG+AGG - chr1_3:52439507-52439526 Msa0124570:CDS 45.0%
AAAATGTGAAGGACCAGAGG+AGG - chr1_3:52439510-52439529 Msa0124570:CDS 45.0%
ATCTGACTGTCTGGGTCAAA+AGG - chr1_3:52439552-52439571 Msa0124570:CDS 45.0%
TCTGGGTCAAAAGGCTGTTT+CGG - chr1_3:52439561-52439580 Msa0124570:CDS 45.0%
! AAAAGGCTGTTTCGGGCATT+CGG - chr1_3:52439569-52439588 Msa0124570:CDS 45.0%
ATGGGTAAGTCAACTGAAGC+GGG - chr1_3:52439802-52439821 Msa0124570:CDS 45.0%
! CAATAGCTATGCGTGTTGCT+CGG + chr1_3:52439894-52439913 None:intergenic 45.0%
!! CAACGGAGCATTTTCAGAGT+AGG + chr1_3:52439983-52440002 None:intergenic 45.0%
CAGAACTAGAGGACTGAGAT+AGG + chr1_3:52440198-52440217 None:intergenic 45.0%
TGGAAACACAGCAGAACTAG+AGG + chr1_3:52440209-52440228 None:intergenic 45.0%
ACCCTGTCTTCCTCTCAAAA+TGG + chr1_3:52440229-52440248 None:intergenic 45.0%
TTGAGAGGAAGACAGGGTAT+TGG - chr1_3:52440231-52440250 Msa0124570:CDS 45.0%
CTCGAGATCATATTTGGAGG+AGG + chr1_3:52440325-52440344 None:intergenic 45.0%
CTCCTCCAAATATGATCTCG+AGG - chr1_3:52440323-52440342 Msa0124570:CDS 45.0%
CACCTCGAGATCATATTTGG+AGG + chr1_3:52440328-52440347 None:intergenic 45.0%
AGACCAACAATTTGGAGGGA+AGG - chr1_3:52440473-52440492 Msa0124570:CDS 45.0%
AGACCTTCCCTCCAAATTGT+TGG + chr1_3:52440479-52440498 None:intergenic 45.0%
TGAGTGGTGGCTAGTAATCA+AGG - chr1_3:52440820-52440839 Msa0124570:CDS 45.0%
GAGTGGTGGCTAGTAATCAA+GGG - chr1_3:52440821-52440840 Msa0124570:CDS 45.0%
TCATTGTGGATCTCGGATAG+CGG + chr1_3:52441575-52441594 None:intergenic 45.0%
!!! GGCCCCTATCTGATGTTTTT+TGG - chr1_3:52441650-52441669 Msa0124570:intron 45.0%
TGTAGTCAGTAGTGGTTGTG+CGG - chr1_3:52441871-52441890 Msa0124570:intron 45.0%
!!! TCGCGGTTTTTTGGACGTTT+AGG - chr1_3:52441929-52441948 Msa0124570:intron 45.0%
AGCAGTGAAGAGAAAGCCAA+GGG + chr1_3:52442488-52442507 None:intergenic 45.0%
CAATCTCTTGAACTCTTGGC+AGG + chr1_3:52443177-52443196 None:intergenic 45.0%
CTGCCAAGAGTTCAAGAGAT+TGG - chr1_3:52443175-52443194 Msa0124570:intron 45.0%
ATCTCACAAGCCAGTTGTGT+GGG + chr1_3:52443484-52443503 None:intergenic 45.0%
CGCACACAGAGGATAAAAGA+TGG + chr1_3:52443541-52443560 None:intergenic 45.0%
CTCCCAAGCATTCGAAATCT+TGG - chr1_3:52443620-52443639 Msa0124570:intron 45.0%
!! TTCTGGAATCTGGGCATCAA+TGG - chr1_3:52443946-52443965 Msa0124570:intron 45.0%
! TCTGGAATCTGGGCATCAAT+GGG - chr1_3:52443947-52443966 Msa0124570:intron 45.0%
GTTTGGCGTATTACAGGTCA+TGG - chr1_3:52444075-52444094 Msa0124570:CDS 45.0%
TGAATCAAGTCTGCATCGGA+GGG - chr1_3:52444123-52444142 Msa0124570:CDS 45.0%
CAGCAGATAATAGTCGAGGT+AGG + chr1_3:52444356-52444375 None:intergenic 45.0%
GAACCGTAGGCAATGTCTTA+AGG - chr1_3:52444404-52444423 Msa0124570:intron 45.0%
AAAAATCCTACCAGAGCCCA+TGG - chr1_3:52444560-52444579 Msa0124570:intron 45.0%
ATTCGAGGCATGCAAAATCC+AGG + chr1_3:52444827-52444846 None:intergenic 45.0%
GAAGAGAGTGATTCTGATGG+AGG - chr1_3:52444869-52444888 Msa0124570:intron 45.0%
TGTTGACGGTGAGCTTGAAA+TGG - chr1_3:52444979-52444998 Msa0124570:intron 45.0%
GAAACAAGATGTGGCATAGG+CGG + chr1_3:52445202-52445221 None:intergenic 45.0%
TGTCTTTCACACGCTGCAAA+AGG + chr1_3:52445372-52445391 None:intergenic 45.0%
! CTAATAGGTTGGCTACTCCT+CGG + chr1_3:52445430-52445449 None:intergenic 45.0%
ACCATCATGCCCCAGAATAT+AGG - chr1_3:52445461-52445480 Msa0124570:intron 45.0%
CCATCATGCCCCAGAATATA+GGG - chr1_3:52445462-52445481 Msa0124570:intron 45.0%
GTGTGCTTCCCTATATTCTG+GGG + chr1_3:52445473-52445492 None:intergenic 45.0%
!! AAAACTGATTCGACGGCACA+TGG + chr1_3:52445609-52445628 None:intergenic 45.0%
AACAGCATGCAAGACATCGA+AGG - chr1_3:52445644-52445663 Msa0124570:intron 45.0%
ACAGCATGCAAGACATCGAA+GGG - chr1_3:52445645-52445664 Msa0124570:intron 45.0%
TGTTGCCTATTGGAGTAAGG+AGG + chr1_3:52445685-52445704 None:intergenic 45.0%
CTCCAATAGGCAACATTTCG+TGG - chr1_3:52445690-52445709 Msa0124570:intron 45.0%
CTCCACGAAATGTTGCCTAT+TGG + chr1_3:52445695-52445714 None:intergenic 45.0%
GCAACATTTCGTGGAGAACA+TGG - chr1_3:52445699-52445718 Msa0124570:intron 45.0%
AATCTTACCGGGATAAGGTG+GGG + chr1_3:52445803-52445822 None:intergenic 45.0%
CAATCTTACCGGGATAAGGT+GGG + chr1_3:52445804-52445823 None:intergenic 45.0%
GAAGATATGCCTTCCCCATA+TGG - chr1_3:52445925-52445944 Msa0124570:intron 45.0%
ACATGGATGACACCCATATG+GGG + chr1_3:52445941-52445960 None:intergenic 45.0%
CACATGGATGACACCCATAT+GGG + chr1_3:52445942-52445961 None:intergenic 45.0%
TCACATGGATGACACCCATA+TGG + chr1_3:52445943-52445962 None:intergenic 45.0%
GGTATTCTAGGTGGTTCACA+TGG + chr1_3:52445958-52445977 None:intergenic 45.0%
CCACCTAGAATACCAGATCA+CGG - chr1_3:52445964-52445983 Msa0124570:intron 45.0%
CACCTAGAATACCAGATCAC+GGG - chr1_3:52445965-52445984 Msa0124570:intron 45.0%
TTCCTGTGATTCATTGACCG+GGG + chr1_3:52446003-52446022 None:intergenic 45.0%
GTTCCTGTGATTCATTGACC+GGG + chr1_3:52446004-52446023 None:intergenic 45.0%
AAAGGGTGGTCTAAATGGCA+TGG + chr1_3:52446028-52446047 None:intergenic 45.0%
GGAATTGCATCTTCAAAGGG+TGG + chr1_3:52446042-52446061 None:intergenic 45.0%
CTTCGTAGACCCTTCAACAT+TGG - chr1_3:52446133-52446152 Msa0124570:intron 45.0%
TATGTTTGCATGTCAGGTCC+AGG - chr1_3:52446172-52446191 Msa0124570:intron 45.0%
GATCCTTGGTTACTATCACC+TGG + chr1_3:52446209-52446228 None:intergenic 45.0%
AGTAACCAAGGATCCAAGTC+TGG - chr1_3:52446215-52446234 Msa0124570:intron 45.0%
TGTTTCCCTCCTTGATTGCT+AGG - chr1_3:52446294-52446313 Msa0124570:intron 45.0%
GGCTGTATACCTAGCAATCA+AGG + chr1_3:52446306-52446325 None:intergenic 45.0%
CCTAAACAAAGCCAGAGTTC+AGG + chr1_3:52446338-52446357 None:intergenic 45.0%
!! CCTGAACTCTGGCTTTGTTT+AGG - chr1_3:52446335-52446354 Msa0124570:intron 45.0%
!! GAACTCTGGCTTTGTTTAGG+AGG - chr1_3:52446338-52446357 Msa0124570:intron 45.0%
GTCCATCATTCTGTACATGC+AGG - chr1_3:52446369-52446388 Msa0124570:intron 45.0%
GTCCTGCATGTACAGAATGA+TGG + chr1_3:52446374-52446393 None:intergenic 45.0%
CCTATTCTCTGCAGAATGCA+GGG - chr1_3:52446473-52446492 Msa0124570:intron 45.0%
AGTCGTTGTAGAGTTGTCAG+AGG - chr1_3:52446503-52446522 Msa0124570:intron 45.0%
TCTCCCATACATTGTTTGCC+TGG - chr1_3:52446700-52446719 Msa0124570:intron 45.0%
CTCCCATACATTGTTTGCCT+GGG - chr1_3:52446701-52446720 Msa0124570:CDS 45.0%
AGTTGGCATACCAAATACCC+AGG + chr1_3:52446721-52446740 None:intergenic 45.0%
!! CCACACGGTTTTATGCAAGA+AGG + chr1_3:52446796-52446815 None:intergenic 45.0%
CCTTCTTGCATAAAACCGTG+TGG - chr1_3:52446793-52446812 Msa0124570:CDS 45.0%
TATCAAACCACTGTCCCACA+CGG + chr1_3:52446811-52446830 None:intergenic 45.0%
! TCGTAGTTGGTGTGTTCAAC+TGG - chr1_3:52446856-52446875 Msa0124570:five_prime_UTR 45.0%
GGTGTGTTCAACTGGAACAT+TGG - chr1_3:52446864-52446883 Msa0124570:five_prime_UTR 45.0%
GTGCATTACCTCAAGCTTCT+GGG + chr1_3:52446891-52446910 None:intergenic 45.0%
TGTGCATTACCTCAAGCTTC+TGG + chr1_3:52446892-52446911 None:intergenic 45.0%
AAACGGCTGCAAAGGATGAA+GGG + chr1_3:52446967-52446986 None:intergenic 45.0%
!! TTTGTAAATTATAAATTATA+TGG - chr1_3:52434618-52434637 Msa0124570:intron 5.0%
!!! ATATTTTGTTATATAATATA+TGG - chr1_3:52439278-52439297 Msa0124570:intron 5.0%
!!! AAATATTATATTTTGTATTT+AGG + chr1_3:52442511-52442530 None:intergenic 5.0%
!! TTGTATTATTATATTATATT+GGG + chr1_3:52443806-52443825 None:intergenic 5.0%
!! ATTGTATTATTATATTATAT+TGG + chr1_3:52443807-52443826 None:intergenic 5.0%
AACTTTCCATTGACGAGCGG+CGG + chr1_3:52431719-52431738 None:intergenic 50.0%
GCCAACTTTCCATTGACGAG+CGG + chr1_3:52431722-52431741 None:intergenic 50.0%
TGAATAGCAGTTACCGTGGC+AGG + chr1_3:52431784-52431803 None:intergenic 50.0%
!! TCGAGTTTGTTGCTTGTGGC+AGG - chr1_3:52433043-52433062 Msa0124570:CDS 50.0%
TGTTGCGAGAGTCAGCTTGT+CGG - chr1_3:52433592-52433611 Msa0124570:CDS 50.0%
CAGCAAAGAGACAGAGCTAG+CGG - chr1_3:52434331-52434350 Msa0124570:CDS 50.0%
CGACATGGGGAAATTGGATC+TGG - chr1_3:52434391-52434410 Msa0124570:intron 50.0%
ATGGGGAAATTGGATCTGGC+TGG - chr1_3:52434395-52434414 Msa0124570:intron 50.0%
GAAATTGGATCTGGCTGGAG+AGG - chr1_3:52434400-52434419 Msa0124570:intron 50.0%
! CTCCCTTTTGGCGGAAAACA+TGG + chr1_3:52434446-52434465 None:intergenic 50.0%
! CATGTTTTCCGCCAAAAGGG+AGG - chr1_3:52434444-52434463 Msa0124570:intron 50.0%
! CACAGTTTCCTCCCTTTTGG+CGG + chr1_3:52434455-52434474 None:intergenic 50.0%
! CTCCACAGTTTCCTCCCTTT+TGG + chr1_3:52434458-52434477 None:intergenic 50.0%
CAAAAGGGAGGAAACTGTGG+AGG - chr1_3:52434456-52434475 Msa0124570:intron 50.0%
GGAAACTGTGGAGGATCCAT+AGG - chr1_3:52434465-52434484 Msa0124570:intron 50.0%
TGTGAAGCCTTCCAAGCCTA+TGG + chr1_3:52434484-52434503 None:intergenic 50.0%
ATAGGCTTGGAAGGCTTCAC+AGG - chr1_3:52434483-52434502 Msa0124570:intron 50.0%
AGCAACGGTAACCACATGGA+AGG - chr1_3:52434707-52434726 Msa0124570:intron 50.0%
GCAACGGTAACCACATGGAA+GGG - chr1_3:52434708-52434727 Msa0124570:intron 50.0%
!! GTTCTGGTTTCCCTTCCATG+TGG + chr1_3:52434721-52434740 None:intergenic 50.0%
ACTGTACTTCAGATGCGGTG+CGG - chr1_3:52434829-52434848 Msa0124570:intron 50.0%
! GGCATCTTTTTCCTGCGGTT+TGG - chr1_3:52434850-52434869 Msa0124570:intron 50.0%
!! GAGAAAAAGCACCAAACCGC+AGG + chr1_3:52434864-52434883 None:intergenic 50.0%
AACAAGATGAACCACCTGCC+AGG + chr1_3:52435135-52435154 None:intergenic 50.0%
AGTAGTCACTGGCCCTTCAT+GGG + chr1_3:52435203-52435222 None:intergenic 50.0%
! AGTGGCTAGTCAGTAGTCAC+TGG + chr1_3:52435214-52435233 None:intergenic 50.0%
CTTGGAGGTCATGGTCACTA+TGG + chr1_3:52435477-52435496 None:intergenic 50.0%
CATAGTGACCATGACCTCCA+AGG - chr1_3:52435475-52435494 Msa0124570:intron 50.0%
CATGGTAACCTTGGAGGTCA+TGG + chr1_3:52435486-52435505 None:intergenic 50.0%
GACCTCCAAGGTTACCATGA+TGG - chr1_3:52435487-52435506 Msa0124570:intron 50.0%
GCAGTCCGCCAAAGAAAGTT+GGG + chr1_3:52435598-52435617 None:intergenic 50.0%
TGCAGTCCGCCAAAGAAAGT+TGG + chr1_3:52435599-52435618 None:intergenic 50.0%
CTCGGTAAATGAGGGGCTTA+GGG + chr1_3:52435649-52435668 None:intergenic 50.0%
TCTCGGTAAATGAGGGGCTT+AGG + chr1_3:52435650-52435669 None:intergenic 50.0%
TTTGTGCGCGTTTGTCTCAG+AGG - chr1_3:52435989-52436008 Msa0124570:intron 50.0%
TTGTGCGCGTTTGTCTCAGA+GGG - chr1_3:52435990-52436009 Msa0124570:intron 50.0%
AAAGGCGGTAAGACGCAGAA+AGG + chr1_3:52436023-52436042 None:intergenic 50.0%
! GCCTTCCTTAAGCCTTGTGA+TGG - chr1_3:52436225-52436244 Msa0124570:intron 50.0%
CCCATCACAAGGCTTAAGGA+AGG + chr1_3:52436229-52436248 None:intergenic 50.0%
CATCCCCATCACAAGGCTTA+AGG + chr1_3:52436233-52436252 None:intergenic 50.0%
! CTTAAGCCTTGTGATGGGGA+TGG - chr1_3:52436231-52436250 Msa0124570:intron 50.0%
GCCTCATCTTAGTCGCAAGT+AGG + chr1_3:52436262-52436281 None:intergenic 50.0%
ACTTGCGACTAAGATGAGGC+AGG - chr1_3:52436262-52436281 Msa0124570:intron 50.0%
CTTGGTGAAGCTAACTGTGG+TGG - chr1_3:52437267-52437286 Msa0124570:intron 50.0%
!! CCTGGGCTGCATTGGTTAAT+TGG + chr1_3:52437683-52437702 None:intergenic 50.0%
CCAATTAACCAATGCAGCCC+AGG - chr1_3:52437680-52437699 Msa0124570:intron 50.0%
CCTTCTAACAGATGCACCCT+GGG + chr1_3:52437700-52437719 None:intergenic 50.0%
TCCTTCTAACAGATGCACCC+TGG + chr1_3:52437701-52437720 None:intergenic 50.0%
GGTCTTGAATGGTAGCATGG+AGG - chr1_3:52437782-52437801 Msa0124570:intron 50.0%
GCCAACCATTAGAGTTGAGG+AGG - chr1_3:52438019-52438038 Msa0124570:intron 50.0%
ACTTGCCCCTTGTGAAACGA+TGG - chr1_3:52438129-52438148 Msa0124570:intron 50.0%
GCCTCCATTCTCACAATTGG+AGG + chr1_3:52438267-52438286 None:intergenic 50.0%
AATGGAGGCTCTGCTGATGT+AGG - chr1_3:52438278-52438297 Msa0124570:intron 50.0%
GTAGGCTCATCTGTCCTGAT+TGG - chr1_3:52438296-52438315 Msa0124570:intron 50.0%
!! CTGACATGGCCTCTAAAGCA+CGG + chr1_3:52438454-52438473 None:intergenic 50.0%
CAAAAGTTCGATGCCTGTGG+TGG - chr1_3:52438614-52438633 Msa0124570:CDS 50.0%
AGAAGAATCACCACCACCAC+AGG + chr1_3:52438630-52438649 None:intergenic 50.0%
AAGTGGATGAGCTGTCATCC+AGG - chr1_3:52438720-52438739 Msa0124570:CDS 50.0%
AGTTTCTTGTGGCTGGAACC+TGG + chr1_3:52438741-52438760 None:intergenic 50.0%
AGGTTCCAGCCACAAGAAAC+TGG - chr1_3:52438740-52438759 Msa0124570:CDS 50.0%
TCTTGCCAGTTTCTTGTGGC+TGG + chr1_3:52438748-52438767 None:intergenic 50.0%
! TTTGGTGGTAATGACAGGGC+AGG + chr1_3:52438923-52438942 None:intergenic 50.0%
GATCCGCCTCAAAATGAGGT+TGG - chr1_3:52439067-52439086 Msa0124570:intron 50.0%
CAGGAGCGAGTTCGTAAAAG+AGG - chr1_3:52439486-52439505 Msa0124570:CDS 50.0%
! CTGGGTCAAAAGGCTGTTTC+GGG - chr1_3:52439562-52439581 Msa0124570:CDS 50.0%
TCAAGTCCATCCCTGACAGA+TGG - chr1_3:52439592-52439611 Msa0124570:CDS 50.0%
CAAGTCCATCCCTGACAGAT+GGG - chr1_3:52439593-52439612 Msa0124570:CDS 50.0%
AAGTCCATCCCTGACAGATG+GGG - chr1_3:52439594-52439613 Msa0124570:CDS 50.0%
TTGGAGGTGATCCTTGTGGA+AGG + chr1_3:52439627-52439646 None:intergenic 50.0%
GTGTTTGGAGGTGATCCTTG+TGG + chr1_3:52439631-52439650 None:intergenic 50.0%
TGCCGTACTGTAGTCAGTAG+TGG - chr1_3:52441863-52441882 Msa0124570:intron 50.0%
GTCCAAAAAACCGCGACTAG+GGG + chr1_3:52441925-52441944 None:intergenic 50.0%
CGTCCAAAAAACCGCGACTA+GGG + chr1_3:52441926-52441945 None:intergenic 50.0%
ACGTCCAAAAAACCGCGACT+AGG + chr1_3:52441927-52441946 None:intergenic 50.0%
ATGAAGTCACGCTGCATAGC+GGG + chr1_3:52442133-52442152 None:intergenic 50.0%
CATGAAGTCACGCTGCATAG+CGG + chr1_3:52442134-52442153 None:intergenic 50.0%
GAGCAGTGAAGAGAAAGCCA+AGG + chr1_3:52442489-52442508 None:intergenic 50.0%
ATGGTTATGGGAGAGAGGGA+GGG + chr1_3:52443206-52443225 None:intergenic 50.0%
AATGGTTATGGGAGAGAGGG+AGG + chr1_3:52443207-52443226 None:intergenic 50.0%
CAGTTGTGTGGGGTTGTGTA+AGG + chr1_3:52443473-52443492 None:intergenic 50.0%
CTTACACAACCCCACACAAC+TGG - chr1_3:52443471-52443490 Msa0124570:intron 50.0%
TCTCACAAGCCAGTTGTGTG+GGG + chr1_3:52443483-52443502 None:intergenic 50.0%
CATCTCACAAGCCAGTTGTG+TGG + chr1_3:52443485-52443504 None:intergenic 50.0%
!! CACAACTGGCTTGTGAGATG+AGG - chr1_3:52443485-52443504 Msa0124570:intron 50.0%
CTATACACACACGCACACAG+AGG + chr1_3:52443552-52443571 None:intergenic 50.0%
CTGAATCAAGTCTGCATCGG+AGG - chr1_3:52444122-52444141 Msa0124570:CDS 50.0%
AGGTAGGACTGCTTGGATAG+CGG + chr1_3:52444340-52444359 None:intergenic 50.0%
ATAGTCGAGGTAGGACTGCT+TGG + chr1_3:52444347-52444366 None:intergenic 50.0%
ACGGCAGCAGATAATAGTCG+AGG + chr1_3:52444360-52444379 None:intergenic 50.0%
TTCTCCTGTGCAGCATTTCC+GGG + chr1_3:52444387-52444406 None:intergenic 50.0%
GTTCTCCTGTGCAGCATTTC+CGG + chr1_3:52444388-52444407 None:intergenic 50.0%
! CGGATATGATGGCGAACCAT+GGG + chr1_3:52444579-52444598 None:intergenic 50.0%
CCATGGTTCGCCATCATATC+CGG - chr1_3:52444577-52444596 Msa0124570:intron 50.0%
CATGGTTCGCCATCATATCC+GGG - chr1_3:52444578-52444597 Msa0124570:intron 50.0%
TCGCCATCATATCCGGGAAT+TGG - chr1_3:52444584-52444603 Msa0124570:intron 50.0%
TATCATCACTGCTGGGAGTG+TGG - chr1_3:52444754-52444773 Msa0124570:intron 50.0%
GATTGAGGCACAAGCTGATG+TGG + chr1_3:52445109-52445128 None:intergenic 50.0%
TACAGTACGGCATGGATCAG+AGG + chr1_3:52445230-52445249 None:intergenic 50.0%
AGACAACCCACTTCACCCTA+TGG - chr1_3:52445387-52445406 Msa0124570:CDS 50.0%
GCTGATCCATAGGGTGAAGT+GGG + chr1_3:52445396-52445415 None:intergenic 50.0%
!! CCCTATATTCTGGGGCATGA+TGG + chr1_3:52445465-52445484 None:intergenic 50.0%
CTATTGGAGTAAGGAGGAGG+TGG + chr1_3:52445679-52445698 None:intergenic 50.0%
CACCTCCTCCTTACTCCAAT+AGG - chr1_3:52445677-52445696 Msa0124570:intron 50.0%
TGCCTATTGGAGTAAGGAGG+AGG + chr1_3:52445682-52445701 None:intergenic 50.0%
ATCTTACCGGGATAAGGTGG+GGG + chr1_3:52445802-52445821 None:intergenic 50.0%
CCAATCTTACCGGGATAAGG+TGG + chr1_3:52445805-52445824 None:intergenic 50.0%
CCACCTTATCCCGGTAAGAT+TGG - chr1_3:52445802-52445821 Msa0124570:intron 50.0%
CCGTGATCTGGTATTCTAGG+TGG + chr1_3:52445967-52445986 None:intergenic 50.0%
CACCCGTGATCTGGTATTCT+AGG + chr1_3:52445970-52445989 None:intergenic 50.0%
CTAGAATACCAGATCACGGG+TGG - chr1_3:52445968-52445987 Msa0124570:intron 50.0%
GCATACCAGACTTGGATCCT+TGG + chr1_3:52446223-52446242 None:intergenic 50.0%
GTACATGCAGGACTCCTTTG+AGG - chr1_3:52446381-52446400 Msa0124570:intron 50.0%
GCCTATTCTCTGCAGAATGC+AGG - chr1_3:52446472-52446491 Msa0124570:intron 50.0%
CCCTGCATTCTGCAGAGAAT+AGG + chr1_3:52446476-52446495 None:intergenic 50.0%
CATAAAACCGTGTGGGACAG+TGG - chr1_3:52446801-52446820 Msa0124570:CDS 50.0%
ACATTGGACCCAGAAGCTTG+AGG - chr1_3:52446880-52446899 Msa0124570:five_prime_UTR 50.0%
CAAACGGCTGCAAAGGATGA+AGG + chr1_3:52446968-52446987 None:intergenic 50.0%
! TTTCTCCGGCTAGGTGCCAT+CGG + chr1_3:52431667-52431686 None:intergenic 55.0%
ATGGCACCTAGCCGGAGAAA+AGG - chr1_3:52431667-52431686 Msa0124570:three_prime_UTR 55.0%
GCCGCTCGTCAATGGAAAGT+TGG - chr1_3:52431718-52431737 Msa0124570:three_prime_UTR 55.0%
GTGGAGTAACCCCACTTCTC+CGG + chr1_3:52433077-52433096 None:intergenic 55.0%
!! CGCTAGCTCTGTCTCTTTGC+TGG + chr1_3:52434333-52434352 None:intergenic 55.0%
AGTCTAGCCTGCATTCAGGC+AGG - chr1_3:52434368-52434387 Msa0124570:CDS 55.0%
TGCATTCAGGCAGGCGACAT+GGG - chr1_3:52434377-52434396 Msa0124570:CDS 55.0%
ATTGGATCTGGCTGGAGAGG+AGG - chr1_3:52434403-52434422 Msa0124570:intron 55.0%
TGGAGAGGAGGTTGCGATGT+AGG - chr1_3:52434415-52434434 Msa0124570:intron 55.0%
CGCCAAAAGGGAGGAAACTG+TGG - chr1_3:52434453-52434472 Msa0124570:intron 55.0%
CTGTGGAGGATCCATAGGCT+TGG - chr1_3:52434470-52434489 Msa0124570:intron 55.0%
GGAGGATCCATAGGCTTGGA+AGG - chr1_3:52434474-52434493 Msa0124570:intron 55.0%
! GGTGCGGCATCTTTTTCCTG+CGG - chr1_3:52434845-52434864 Msa0124570:intron 55.0%
ACCAAGAAAAGTGGCCAGCC+TGG - chr1_3:52435114-52435133 Msa0124570:intron 55.0%
CAGTAGTCACTGGCCCTTCA+TGG + chr1_3:52435204-52435223 None:intergenic 55.0%
!! CTCCATTCTGAGGTCATGGC+AGG - chr1_3:52435424-52435443 Msa0124570:intron 55.0%
AGCCTGCCATGACCTCAGAA+TGG + chr1_3:52435429-52435448 None:intergenic 55.0%
!! ATTCTGAGGTCATGGCAGGC+TGG - chr1_3:52435428-52435447 Msa0124570:intron 55.0%
GAAAGGCCATCCCCATCACA+AGG + chr1_3:52436240-52436259 None:intergenic 55.0%
!! CCATGGGTTGGTATGTCCAG+CGG - chr1_3:52437407-52437426 Msa0124570:intron 55.0%
CTGTGGGGATAAGTCAGCAG+CGG + chr1_3:52437556-52437575 None:intergenic 55.0%
!! GCTGCTGACTTATCCCCACA+GGG - chr1_3:52437555-52437574 Msa0124570:intron 55.0%
CCCAGGGTGCATCTGTTAGA+AGG - chr1_3:52437697-52437716 Msa0124570:intron 55.0%
TTGAGGAGGAACCTGGTGTG+CGG - chr1_3:52438033-52438052 Msa0124570:intron 55.0%
TGACTGGAATTCCGCACACC+AGG + chr1_3:52438047-52438066 None:intergenic 55.0%
GCTATTGAGCTCTCCCTCTG+TGG + chr1_3:52438180-52438199 None:intergenic 55.0%
GAGGAAGCTATCATCTGCGG+TGG + chr1_3:52438248-52438267 None:intergenic 55.0%
!! CGGTGAAGGCGTTTAGATGG+AGG + chr1_3:52438434-52438453 None:intergenic 55.0%
!! GCACGGTGAAGGCGTTTAGA+TGG + chr1_3:52438437-52438456 None:intergenic 55.0%
ACGCCTTCACCGTGCTTTAG+AGG - chr1_3:52438442-52438461 Msa0124570:intron 55.0%
!! TGGCCTCTAAAGCACGGTGA+AGG + chr1_3:52438448-52438467 None:intergenic 55.0%
AAGTTCGATGCCTGTGGTGG+TGG - chr1_3:52438617-52438636 Msa0124570:CDS 55.0%
AGTCCATCCCTGACAGATGG+GGG - chr1_3:52439595-52439614 Msa0124570:CDS 55.0%
GCAATCTCCCCCATCTGTCA+GGG + chr1_3:52439605-52439624 None:intergenic 55.0%
! GCGGCCGCTATTGACTACTA+TGG + chr1_3:52441050-52441069 None:intergenic 55.0%
CGCTACGACGATTAGCGTAG+CGG + chr1_3:52441094-52441113 None:intergenic 55.0%
CGCTACGCTAATCGTCGTAG+CGG - chr1_3:52441092-52441111 Msa0124570:CDS 55.0%
CAGTTGCTATAGCGGCGTAG+CGG - chr1_3:52441130-52441149 Msa0124570:CDS 55.0%
! TCTCGGATAGCGGTGCATAG+CGG + chr1_3:52441565-52441584 None:intergenic 55.0%
ACGTTCCGCAACACCTGTAG+TGG + chr1_3:52441627-52441646 None:intergenic 55.0%
! CTACAGGTGTTGCGGAACGT+CGG - chr1_3:52441627-52441646 Msa0124570:intron 55.0%
! TACAGGTGTTGCGGAACGTC+GGG - chr1_3:52441628-52441647 Msa0124570:intron 55.0%
AGTGGTTGTGCGGCCACTAT+TGG - chr1_3:52441881-52441900 Msa0124570:intron 55.0%
ATCAAGTCTGCATCGGAGGG+TGG - chr1_3:52444126-52444145 Msa0124570:CDS 55.0%
ATGCTGCACAGGAGAACCGT+AGG - chr1_3:52444391-52444410 Msa0124570:intron 55.0%
! CCGGATATGATGGCGAACCA+TGG + chr1_3:52444580-52444599 None:intergenic 55.0%
AGGCACAAGCTGATGTGGAG+GGG + chr1_3:52445104-52445123 None:intergenic 55.0%
GAGGCACAAGCTGATGTGGA+GGG + chr1_3:52445105-52445124 None:intergenic 55.0%
TGAGGCACAAGCTGATGTGG+AGG + chr1_3:52445106-52445125 None:intergenic 55.0%
! GGTGGTGGCATGGAAGATTG+AGG + chr1_3:52445124-52445143 None:intergenic 55.0%
ACAAGATGTGGCATAGGCGG+TGG + chr1_3:52445199-52445218 None:intergenic 55.0%
GGCTGATCCATAGGGTGAAG+TGG + chr1_3:52445397-52445416 None:intergenic 55.0%
TCACCCTATGGATCAGCCCT+TGG - chr1_3:52445399-52445418 Msa0124570:CDS 55.0%
CAGCCAAGGGCTGATCCATA+GGG + chr1_3:52445405-52445424 None:intergenic 55.0%
GCATGCAAGACATCGAAGGG+AGG - chr1_3:52445648-52445667 Msa0124570:intron 55.0%
TTGGAGTAAGGAGGAGGTGG+TGG + chr1_3:52445676-52445695 None:intergenic 55.0%
TCTTACCGGGATAAGGTGGG+GGG + chr1_3:52445801-52445820 None:intergenic 55.0%
GGATGACACCCATATGGGGA+AGG + chr1_3:52445937-52445956 None:intergenic 55.0%
GGAAATCTCCACCCGTGATC+TGG + chr1_3:52445979-52445998 None:intergenic 55.0%
CTGTGATTCATTGACCGGGG+AGG + chr1_3:52446000-52446019 None:intergenic 55.0%
CTCCCCGGTCAATGAATCAC+AGG - chr1_3:52445998-52446017 Msa0124570:intron 55.0%
! GCATGTCAGGTCCAGGCTTT+TGG - chr1_3:52446179-52446198 Msa0124570:intron 55.0%
! TGTCAGGTCCAGGCTTTTGG+CGG - chr1_3:52446182-52446201 Msa0124570:intron 55.0%
GGCCCAGGTGATAGTAACCA+AGG - chr1_3:52446203-52446222 Msa0124570:intron 55.0%
CCAGAGTTCAGGCCGAAAAG+AGG + chr1_3:52446327-52446346 None:intergenic 55.0%
! CCTCTTTTCGGCCTGAACTC+TGG - chr1_3:52446324-52446343 Msa0124570:intron 55.0%
! CATGCAGGACTCCTTTGAGG+AGG - chr1_3:52446384-52446403 Msa0124570:intron 55.0%
TTCTCTGCAGAATGCAGGGC+AGG - chr1_3:52446477-52446496 Msa0124570:intron 55.0%
CCATGCACACAGCCTTGAGT+TGG + chr1_3:52446738-52446757 None:intergenic 55.0%
CCAACTCAAGGCTGTGTGCA+TGG - chr1_3:52446735-52446754 Msa0124570:CDS 55.0%
CTGTGTGCATGGCCTGTTAG+TGG - chr1_3:52446746-52446765 Msa0124570:CDS 55.0%
CATCTGACCCATAGCGGCGT+CGG - chr1_3:52431635-52431654 Msa0124570:three_prime_UTR 60.0%
TTCCTCCGATGGCACCTAGC+CGG - chr1_3:52431659-52431678 Msa0124570:three_prime_UTR 60.0%
GCACCTAGCCGGAGAAAAGG+AGG - chr1_3:52431670-52431689 Msa0124570:three_prime_UTR 60.0%
! CTGCCTCCTTTTCTCCGGCT+AGG + chr1_3:52431676-52431695 None:intergenic 60.0%
TTACCGTGGCAGGCCATGCA+GGG + chr1_3:52431774-52431793 None:intergenic 60.0%
CTTGTGGCAGGTCAGTGAGC+CGG - chr1_3:52433055-52433074 Msa0124570:CDS 60.0%
AGGTCAGTGAGCCGGAGAAG+TGG - chr1_3:52433063-52433082 Msa0124570:CDS 60.0%
GGTCAGTGAGCCGGAGAAGT+GGG - chr1_3:52433064-52433083 Msa0124570:CDS 60.0%
GTCAGTGAGCCGGAGAAGTG+GGG - chr1_3:52433065-52433084 Msa0124570:CDS 60.0%
CATGTCGCCTGCCTGAATGC+AGG + chr1_3:52434378-52434397 None:intergenic 60.0%
CTGCATTCAGGCAGGCGACA+TGG - chr1_3:52434376-52434395 Msa0124570:CDS 60.0%
GCATTCAGGCAGGCGACATG+GGG - chr1_3:52434378-52434397 Msa0124570:CDS 60.0%
GGCAGGCGACATGGGGAAAT+TGG - chr1_3:52434385-52434404 Msa0124570:intron 60.0%
!!! GCCAGGCTGGCCACTTTTCT+TGG + chr1_3:52435118-52435137 None:intergenic 60.0%
AGAAAAGTGGCCAGCCTGGC+AGG - chr1_3:52435118-52435137 Msa0124570:intron 60.0%
AGATGAACCACCTGCCAGGC+TGG + chr1_3:52435131-52435150 None:intergenic 60.0%
CCGCTGGACATACCAACCCA+TGG + chr1_3:52437410-52437429 None:intergenic 60.0%
!! TGGGTTGGTATGTCCAGCGG+AGG - chr1_3:52437410-52437429 Msa0124570:intron 60.0%
!! CGCTGCTGACTTATCCCCAC+AGG - chr1_3:52437554-52437573 Msa0124570:intron 60.0%
AGATGCACCCTGGGCTGCAT+TGG + chr1_3:52437691-52437710 None:intergenic 60.0%
TCTCCCCCATCTGTCAGGGA+TGG + chr1_3:52439601-52439620 None:intergenic 60.0%
GGCAATCTCCCCCATCTGTC+AGG + chr1_3:52439606-52439625 None:intergenic 60.0%
GGGGGAGATTGCCTTCCACA+AGG - chr1_3:52439613-52439632 Msa0124570:CDS 60.0%
CGCTAATCGTCGTAGCGGTG+CGG - chr1_3:52441097-52441116 Msa0124570:CDS 60.0%
TTGTGCTGTGCGGCCACTAC+AGG - chr1_3:52441611-52441630 Msa0124570:intron 60.0%
! TGCGGCCACTACAGGTGTTG+CGG - chr1_3:52441619-52441638 Msa0124570:intron 60.0%
! ACAGGTGTTGCGGAACGTCG+GGG - chr1_3:52441629-52441648 Msa0124570:intron 60.0%
!!! GGCCCCTAGTCGCGGTTTTT+TGG - chr1_3:52441920-52441939 Msa0124570:intron 60.0%
TTATCTGCTGCCGTGCCTCC+CGG - chr1_3:52444366-52444385 Msa0124570:intron 60.0%
TGCAGCATTTCCGGGAGGCA+CGG + chr1_3:52444379-52444398 None:intergenic 60.0%
TCCTGTGCAGCATTTCCGGG+AGG + chr1_3:52444384-52444403 None:intergenic 60.0%
! TGATGGCGAACCATGGGCTC+TGG + chr1_3:52444573-52444592 None:intergenic 60.0%
CACAAGCTGATGTGGAGGGG+CGG + chr1_3:52445101-52445120 None:intergenic 60.0%
!! AGGGGCTAATGGTGGTGGCA+TGG + chr1_3:52445134-52445153 None:intergenic 60.0%
AGATGTGGCATAGGCGGTGG+TGG + chr1_3:52445196-52445215 None:intergenic 60.0%
GCAGCCAAGGGCTGATCCAT+AGG + chr1_3:52445406-52445425 None:intergenic 60.0%
! CTACTCCTCGGTGCAGCCAA+GGG + chr1_3:52445418-52445437 None:intergenic 60.0%
TGATTCGACGGCACATGGCG+AGG + chr1_3:52445604-52445623 None:intergenic 60.0%
GATGTCCCCCCACCTTATCC+CGG - chr1_3:52445793-52445812 Msa0124570:intron 60.0%
ACGGGTGGAGATTTCCTCCC+CGG - chr1_3:52445983-52446002 Msa0124570:intron 60.0%
GAGGAAGCCGACGCCGCTAT+GGG + chr1_3:52431645-52431664 None:intergenic 65.0%
CTTCCCTGCATGGCCTGCCA+CGG - chr1_3:52431768-52431787 Msa0124570:three_prime_UTR 65.0%
GTTACCGTGGCAGGCCATGC+AGG + chr1_3:52431775-52431794 None:intergenic 65.0%
AAAGTGGCCAGCCTGGCAGG+TGG - chr1_3:52435121-52435140 Msa0124570:intron 65.0%
GCAGCTGAGTCATCCTCCGC+TGG + chr1_3:52437426-52437445 None:intergenic 65.0%
! AGTGTTGGGGCCCCTAGTCG+CGG - chr1_3:52441912-52441931 Msa0124570:intron 65.0%
GCCTCCCGGAAATGCTGCAC+AGG - chr1_3:52444380-52444399 Msa0124570:intron 65.0%
! GGCGAACCATGGGCTCTGGT+AGG + chr1_3:52444569-52444588 None:intergenic 65.0%
AGCTGATGTGGAGGGGCGGA+TGG + chr1_3:52445097-52445116 None:intergenic 65.0%
GGTGGAGGGGCTAATGGTGG+TGG + chr1_3:52445139-52445158 None:intergenic 65.0%
GGAGGTGGAGGGGCTAATGG+TGG + chr1_3:52445142-52445161 None:intergenic 65.0%
GGTGGAGGTGGAGGGGCTAA+TGG + chr1_3:52445145-52445164 None:intergenic 65.0%
!! AGGTGGTGGTGGAGGTGGAG+GGG + chr1_3:52445152-52445171 None:intergenic 65.0%
!! GAGGTGGTGGTGGAGGTGGA+GGG + chr1_3:52445153-52445172 None:intergenic 65.0%
!! ATAGGCGGTGGTGGTGGAGG+AGG + chr1_3:52445187-52445206 None:intergenic 65.0%
! TGTGGCATAGGCGGTGGTGG+TGG + chr1_3:52445193-52445212 None:intergenic 65.0%
ATCAGCCCTTGGCTGCACCG+AGG - chr1_3:52445410-52445429 Msa0124570:intron 65.0%
! GCTACTCCTCGGTGCAGCCA+AGG + chr1_3:52445419-52445438 None:intergenic 65.0%
TTCGACGGCACATGGCGAGG+CGG + chr1_3:52445601-52445620 None:intergenic 65.0%
GGAGGAAGCCGACGCCGCTA+TGG + chr1_3:52431646-52431665 None:intergenic 70.0%
! CTCCGGCTAGGTGCCATCGG+AGG + chr1_3:52431664-52431683 None:intergenic 70.0%
CCATTGACGAGCGGCGGCAG+CGG + chr1_3:52431713-52431732 None:intergenic 70.0%
AGCGGCCGCGCGTAGTGTTG+CGG - chr1_3:52441061-52441080 Msa0124570:CDS 70.0%
CGTCGCCGCAACACTACGCG+CGG + chr1_3:52441069-52441088 None:intergenic 70.0%
TGTGGAGGGGCGGATGGCAG+AGG + chr1_3:52445091-52445110 None:intergenic 70.0%
!! GGAGGTGGTGGTGGAGGTGG+AGG + chr1_3:52445154-52445173 None:intergenic 70.0%
!! GGTGGAGGTGGTGGTGGAGG+TGG + chr1_3:52445157-52445176 None:intergenic 70.0%
!! GGTGGTGGAGGTGGTGGTGG+AGG + chr1_3:52445160-52445179 None:intergenic 70.0%
!! GGTGGTGGTGGAGGTGGTGG+TGG + chr1_3:52445163-52445182 None:intergenic 70.0%
!! GGTGGTGGTGGTGGAGGTGG+TGG + chr1_3:52445166-52445185 None:intergenic 70.0%
!! GGAGGTGGTGGTGGTGGAGG+TGG + chr1_3:52445169-52445188 None:intergenic 70.0%
!! GGAGGAGGTGGTGGTGGTGG+AGG + chr1_3:52445172-52445191 None:intergenic 70.0%
!! GGTGGAGGAGGTGGTGGTGG+TGG + chr1_3:52445175-52445194 None:intergenic 70.0%
!! GGTGGTGGAGGAGGTGGTGG+TGG + chr1_3:52445178-52445197 None:intergenic 70.0%
!! GGTGGTGGTGGAGGAGGTGG+TGG + chr1_3:52445181-52445200 None:intergenic 70.0%
!! GGCATAGGCGGTGGTGGTGG+AGG + chr1_3:52445190-52445209 None:intergenic 70.0%
! GTCCAGGCTTTTGGCGGCCC+AGG - chr1_3:52446188-52446207 Msa0124570:intron 70.0%
CACCTGGGCCGCCAAAAGCC+TGG + chr1_3:52446193-52446212 None:intergenic 70.0%
!! GCGGCGTCGGCTTCCTCCGA+TGG - chr1_3:52431648-52431667 Msa0124570:three_prime_UTR 75.0%
TTGACGAGCGGCGGCAGCGG+CGG + chr1_3:52431710-52431729 None:intergenic 75.0%
CCGCTGCCGCCGCTCGTCAA+TGG - chr1_3:52431710-52431729 Msa0124570:three_prime_UTR 75.0%
!! GGCGGTGGTGGTGGAGGAGG+TGG + chr1_3:52445184-52445203 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 52431405 52447085 52431405 ID=Msa0124570;Name=Msa0124570
chr1_3 mRNA 52431405 52447085 52431405 ID=Msa0124570-mRNA-1;Parent=Msa0124570;Name=Msa0124570-mRNA-1;_AED=0.06;_eAED=0.06;_QI=262|0.69|0.71|0.92|0.84|0.78|14|793|1426
chr1_3 exon 52431405 52432174 52431405 ID=Msa0124570-mRNA-1:exon:16093;Parent=Msa0124570-mRNA-1
chr1_3 exon 52432254 52432302 52432254 ID=Msa0124570-mRNA-1:exon:16092;Parent=Msa0124570-mRNA-1
chr1_3 exon 52432415 52432582 52432415 ID=Msa0124570-mRNA-1:exon:16091;Parent=Msa0124570-mRNA-1
chr1_3 exon 52432676 52433111 52432676 ID=Msa0124570-mRNA-1:exon:16090;Parent=Msa0124570-mRNA-1
chr1_3 exon 52433211 52433685 52433211 ID=Msa0124570-mRNA-1:exon:16089;Parent=Msa0124570-mRNA-1
chr1_3 exon 52433769 52433859 52433769 ID=Msa0124570-mRNA-1:exon:16088;Parent=Msa0124570-mRNA-1
chr1_3 exon 52433909 52433953 52433909 ID=Msa0124570-mRNA-1:exon:16087;Parent=Msa0124570-mRNA-1
chr1_3 exon 52434061 52434177 52434061 ID=Msa0124570-mRNA-1:exon:16086;Parent=Msa0124570-mRNA-1
chr1_3 exon 52434291 52434399 52434291 ID=Msa0124570-mRNA-1:exon:16085;Parent=Msa0124570-mRNA-1
chr1_3 exon 52438548 52439001 52438548 ID=Msa0124570-mRNA-1:exon:16084;Parent=Msa0124570-mRNA-1
chr1_3 exon 52439338 52441368 52439338 ID=Msa0124570-mRNA-1:exon:16083;Parent=Msa0124570-mRNA-1
chr1_3 exon 52444058 52444186 52444058 ID=Msa0124570-mRNA-1:exon:16082;Parent=Msa0124570-mRNA-1
chr1_3 exon 52445349 52445425 52445349 ID=Msa0124570-mRNA-1:exon:16081;Parent=Msa0124570-mRNA-1
chr1_3 exon 52446701 52447085 52446701 ID=Msa0124570-mRNA-1:exon:16080;Parent=Msa0124570-mRNA-1
chr1_3 five_prime_UTR 52446824 52447085 52446824 ID=Msa0124570-mRNA-1:five_prime_utr;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52446701 52446823 52446701 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52445349 52445425 52445349 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52444058 52444186 52444058 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52439338 52441368 52439338 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52438548 52439001 52438548 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52434291 52434399 52434291 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52434061 52434177 52434061 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52433909 52433953 52433909 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52433769 52433859 52433769 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52433211 52433685 52433211 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52432676 52433111 52432676 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52432415 52432582 52432415 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 CDS 52432277 52432302 52432277 ID=Msa0124570-mRNA-1:cds;Parent=Msa0124570-mRNA-1
chr1_3 three_prime_UTR 52432254 52432276 52432254 ID=Msa0124570-mRNA-1:three_prime_utr;Parent=Msa0124570-mRNA-1
chr1_3 three_prime_UTR 52431405 52432174 52431405 ID=Msa0124570-mRNA-1:three_prime_utr;Parent=Msa0124570-mRNA-1
Gene Sequence

>Msa0124570

ATGGCACCTAGCCGGAGAAAAGGAGGCAGTAAAGCAGCGGCCGCCGCTGCCGCCGCTCGTCAATGGAAAGTTGGCGATCTAGTTCTTGCTAAAGTTAAAGGCTTCCCTGCATGGCCTGCCACGGTCAGTGAGCCGGAGAAGTGGGGTTACTCCACTGATTTGAAGAAAGTGCTTGTTTTCTTTTTTGGAACCCAACAAATTCTAACATTCGCTGGATCTGAGTTTGCCAGCAAAGAGACAGAGCTAGCGGAAACAGTTGAAAATAGTCTAGCCTGCATTCAGGCAGGCGACATGGGGAAATTGGATCTGGCTGGAGAGGAGGTTGCGATTGCTTTCTGCAATCCTGCTGATGTCGAAGCATTTACCGAGGAGAAAAAACAATCTCTCGTCAAACGTCAAGGAAAGGGTGCTGACTTTGTTCGTGCTGTGAAGGAGATTGTCGATAGTTATGAGAAATTAAAAAAAGAGAGACAACTTGGTGAAGCTAACTGTGGTGGCAATGTTGCTGATGCAAATGTTTCAAAGCCATTCAACTCATACAACAAGAATCAGACAGATGCTCCTGCTTTATCGCCTACTTTACCTATGAAATCTTCAAATTCCGATATTGATAGCCATGGGTTGGTATGTCCAGCGGAGGATGACTCAGCTGCTGTATTGAAAGATGAATCTCATGATAACGAGGCATCAAAGGAGCTTACTGAGAATGTTGCTTCTGTACATTCGGCTAAGCCACTAACTTACTCTTCTCGAAAGAGATCCGCTGCTGACTTATCCCCACAGGGCTTCATAACAGATAGGCATATGCCAGTACGAAAGAATAGAAGCTCATCACGAGTCCAACCCTTTATGTTTCCATGTAATGACAGTGGAAAGAATGCTGGCAGCCAATTAACCAATGCAGCCCAGGGTGCATCTGTTAGAAGGAATAAACGTCTTAGGAAATCACCTGATCTTGCTGGTTGTAATGATTTTGATTCATCTGCTTTGGTCTTGAATGGTAGCATGGAGGACAAAGACAACAGCTCTGAAATTCTCACAAATGATTCTGATGAATTTAGTTTGAATGAGGGTAGTGCAATGGATTCAAATTTTAAACACACCGAAACTAGTGAATGCCCTGAAGAAGTTGAGCTGAACAAAGGCCTTGATCTTAAAATAAAGGGTGTGGTCAATAAGAAGAAAAGAAACCCAAATAGGAAGAGGGCAACCAATGATACTTCCAAGCCAACCATTAGAGTTGAGGAGGAACCTGGTGTGCGGAATTCCAGTCAAAGTTCCCAGAACATTTGCAGAAATTCCGAAGAGAGATGCTTTGAGCAAGATGGAGATGAACACTTGCCCCTTGTGAAACGATGGAGAGTCAGAATGGGTAAATCATCTTCCACAGAGGGAGAGCTCAATAGCATTCTACATACTCCAGGGAAAAGCTGTAAGGAAGATATTAACTCACCACCGCAGATGATAGCTTCCTCCAATTGTGAGAATGGAGGCTCTGCTGATGTAGGCTCATCTGTCCTGATTGGCACCATGAATAATGTTTCTCCTTCAAAGAATTGTACACCATGTTTTGAAAATCAGGTTTGTAATACTAAGAAAGATCAAACATTCTGCTCTGTGGACTGCGAAGCTGCTTTACCTCCATCTAAACGCCTTCACCGTGCTTTAGAGGCCATGTCAGCTAATGCTGCTGAAGAAGGTCAAGCTCATATAGAATCATCAGCCTCAAGAATGACATCAATTGCCACATGCTGTATATCTTCTATCAAGACAAGTCCAGATGTGGCTATTAATGATCATGAAGGTGGCAGTTTAGAGTTGCAAAAGTTCGATGCCTGTGGTGGTGGTGATTCTTCTCATATAATTGTGCATAGTTTGTCAGCTAATTCAAATCCGATGATTTCAACAGAGAATAAATTATCTAATCAAGTGGATGAGCTGTCATCCAGGTTCCAGCCACAAGAAACTGGCAAGAATGTTCTCCAATGTGCTGCAGATCAAATTGAAGAACTTAGTGATTTTGTTGTTAGTCACACTGCTAATGTGGATTTGAAAACTCAGGTGCATGGGGAAACTAATCCAAATCTTGATTCAAAATGTAATGAAGCTGAAAGCAATCACGATTCACCTGCCCTGTCATTACCACCAAATATTGAAGGCAATATTATAACATCGAATCATTCAAATGCAACATCCAATACATCAGAGCACAATGGAATAAACCTTCATTCTGTGGCAGATGTGATGAAGAAAGAAATTATTTCCCCTAATATTGATCCGCCTCAAAATGAGGTTGGTGTTTCTGAGGGTACGAAGTGCTTGAAGCCAGCAGTAGATGATGTCAACAGAGCAAATGACATGAGCGAGTTCGTAAAAGAGGTAAAATGTGAAGGACCAGAGGAGGATTTGAATTCTGTTTCAACATCTGACTGTCTGGGTCAAAAGGCTGTTTCGGGCATTCGGTCAAGTCCATCCCTGACAGATGGGGGAGATTGCCTTCCACAAGGATCACCTCCAAACACGTCAATTTGCAATGTATCTACATCAGACAGTAGTAATATCCTTCACAATGGAAGTTGTAGTCCTGATGTACATTTGCACCAGAAACAAACTTTATCTGGTCCTGTCGATGAAAGTAAGTATGGATCTGAGGCAACTCAACAATCAAGATCAATGGGTAAGTCAACTGAAGCGGGACGTGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAGTATTGGCCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGATAAGGTCATGGAAATTCTTGCCGATAATCTTGAAACTGAATCAAGTCTGCATCGGAGGGTGGATTTGTTTTTTCTTGTTGACTCTATTGCACAGTTTTCTCGAGGTTTAAAAGGTGATGTTTGTTTAGTATATTCATCCGCTATCCAAGCAGTCCTACCTCGACTATTATCTGCTGCCGTGCCTCCCGGAAATGCTGCACAGGAGAACCGTAGGCAATGTCTTAAGGCAAGTTTTAAGGCTGTGGTTGGAGAGAAAAATCCTACCAGAGCCCATGGCGTCTATTCACGACGATCATTAAGAACAGAGAGGGCTTTGGATGACCCTATAAGAGAAATGGAGGGTATGCATGTTGACGAATATGGAAGCAACTCAAGTTTGCAGTTACCTGGATTTTGCATGCCTCGAATGCTTAAAGATGAAGATGACAATGAAGAGAGTGATTCTGATGGAGGCAATTTTGAGGCTGTCACACCTGAGCATAATTCTGAAGTACATGAAATGACTTCTATAATTGATAAACACAGGCATATCTTGGAAGATGTTGACGGTGAGCTTGAAATGGAAGATGTGTCTCCCTCTCGTGATGTTGAAATGAATTCATTTTCCAATGTTGATAGAGGAAATGCCACACAGTTTAACAATAATATTCCTCTGCCATCCGCCCCTCCACATCAGCTTGTGCCTCAATCTTCCATGCCACCACCATTAGCCCCTCCACCTCCACCACCACCTCCACCACCACCACCTCCTCCACCACCACCGCCTATGCCACATCTTGTTTCATCTACCTCTGATCCATGCCGTACTGTATTTAATTCTAGAGGTCATACAGAATCACAGCGTGTGAAAGACAACCCACTTCACCCTATGGATCAGCCCTTGGCTGCACCGAGGAGTAGCCAACCTATTAGTAATGCAGTGCACCATCATGCCCCAGAATATAGGGAAGCACACATTTCTGAGTCTGATCGCTCTTTCAACAGTTTCCCTGTACCGCATCCAGTAAATTATCGACATTCTGATGGTGTTACTATGCATGATAGAGGGCACTCTATAAGGCCGCCTCGCCATGTGCCGTCGAATCAGTTTTCTTTTGTTCACGGGGAACAGCATGCAAGACATCGAAGGGAGGTTCCACCACCTCCTCCTTACTCCAATAGGCAACATTTCGTGGAGAACATGGAGAGAGAACACTTCTACCATAATAATCACGAAAGATTAAAACCGCCTCCATATGATTATCGAGAGAGATGGGATGTCCCCCCACCTTATCCCGGTCCTAGGTATCATGACGAAGATATGCCTTCCCCATATGGGTGTCATCCATGTGAACCACCTAGAATACCAGATCACGGGTGGAGATTTCCTCCCCGGTCAATGAATCACAGGAACACCATGCCATTTAGACCACCCTTTGAAGATGCAATTCCAGTTACAAACAGAGGTCCAGGCTTTTGGCGGCCCAGGTGA
Protein sequence

>Msa0124570

MAPSRRKGGSKAAAAAAAARQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDLKKVLVFFFGTQQILTFAGSEFASKETELAETVENSLACIQAGDMGKLDLAGEEVAIAFCNPADVEAFTEEKKQSLVKRQGKGADFVRAVKEIVDSYEKLKKERQLGEANCGGNVADANVSKPFNSYNKNQTDAPALSPTLPMKSSNSDIDSHGLVCPAEDDSAAVLKDESHDNEASKELTENVASVHSAKPLTYSSRKRSAADLSPQGFITDRHMPVRKNRSSSRVQPFMFPCNDSGKNAGSQLTNAAQGASVRRNKRLRKSPDLAGCNDFDSSALVLNGSMEDKDNSSEILTNDSDEFSLNEGSAMDSNFKHTETSECPEEVELNKGLDLKIKGVVNKKKRNPNRKRATNDTSKPTIRVEEEPGVRNSSQSSQNICRNSEERCFEQDGDEHLPLVKRWRVRMGKSSSTEGELNSILHTPGKSCKEDINSPPQMIASSNCENGGSADVGSSVLIGTMNNVSPSKNCTPCFENQVCNTKKDQTFCSVDCEAALPPSKRLHRALEAMSANAAEEGQAHIESSASRMTSIATCCISSIKTSPDVAINDHEGGSLELQKFDACGGGDSSHIIVHSLSANSNPMISTENKLSNQVDELSSRFQPQETGKNVLQCAADQIEELSDFVVSHTANVDLKTQVHGETNPNLDSKCNEAESNHDSPALSLPPNIEGNIITSNHSNATSNTSEHNGINLHSVADVMKKEIISPNIDPPQNEVGVSEGTKCLKPAVDDVNRANDMSEFVKEVKCEGPEEDLNSVSTSDCLGQKAVSGIRSSPSLTDGGDCLPQGSPPNTSICNVSTSDSSNILHNGSCSPDVHLHQKQTLSGPVDESKYGSEATQQSRSMGKSTEAGRAALLYFEAMLGTLKRTKESIGRATRIAIDCAKFGIADKVMEILADNLETESSLHRRVDLFFLVDSIAQFSRGLKGDVCLVYSSAIQAVLPRLLSAAVPPGNAAQENRRQCLKASFKAVVGEKNPTRAHGVYSRRSLRTERALDDPIREMEGMHVDEYGSNSSLQLPGFCMPRMLKDEDDNEESDSDGGNFEAVTPEHNSEVHEMTSIIDKHRHILEDVDGELEMEDVSPSRDVEMNSFSNVDRGNATQFNNNIPLPSAPPHQLVPQSSMPPPLAPPPPPPPPPPPPPPPPPPMPHLVSSTSDPCRTVFNSRGHTESQRVKDNPLHPMDQPLAAPRSSQPISNAVHHHAPEYREAHISESDRSFNSFPVPHPVNYRHSDGVTMHDRGHSIRPPRHVPSNQFSFVHGEQHARHRREVPPPPPYSNRQHFVENMEREHFYHNNHERLKPPPYDYRERWDVPPPYPGPRYHDEDMPSPYGCHPCEPPRIPDHGWRFPPRSMNHRNTMPFRPPFEDAIPVTNRGPGFWRPR*