Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302610 | XP_003597429.1 | 96.667 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 9.15e-77 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302610 | sp|Q1ZXH4|EMC6_DICDI | 37.755 | 98 | 59 | 2 | 24 | 120 | 27 | 123 | 7.18e-17 | 73.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302610 | G7IUB5 | 96.667 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 4.37e-77 | 232 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0302610 | Msa0340010 | 0.897034 | 2.077779e-76 | -8.615850e-47 |
| Msa0302610 | Msa0766080 | 0.829362 | 5.369658e-55 | -8.615850e-47 |
| Msa0302610 | Msa0827380 | 0.802503 | 5.438922e-49 | -8.615850e-47 |
| Msa0302610 | Msa1369190 | 0.808270 | 3.362819e-50 | -8.615850e-47 |
| Msa0302610 | Msa1406080 | 0.801856 | 7.391041e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302610 | MtrunA17_Chr2g0328801 | 96.667 | 120 | 4 | 0 | 1 | 120 | 1 | 120 | 8.41e-81 | 232 |
| Msa0302610 | MtrunA17_Chr2g0294091 | 95.000 | 120 | 6 | 0 | 1 | 120 | 1 | 120 | 5.86e-70 | 205 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302610 | AT5G49540.1 | 68.142 | 113 | 36 | 0 | 8 | 120 | 2 | 114 | 2.27e-51 | 158 |
| Msa0302610 | AT5G49540.2 | 66.038 | 106 | 36 | 0 | 8 | 113 | 2 | 107 | 1.43e-45 | 143 |
Find 56 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCCAACTGTATAGAATTT+TGG | 0.107135 | 2_3:+59415899 | Msa0302610:five_prime_UTR |
| CGGAGTTGTTGCTGGTATTT+TGG | 0.142064 | 2_3:+59417460 | Msa0302610:CDS |
| CGAACATTCTTATCTATAAT+TGG | 0.198495 | 2_3:+59417437 | Msa0302610:CDS |
| AATATAATGGCTGGACATTC+TGG | 0.202188 | 2_3:+59417185 | Msa0302610:exon |
| GCGGTGAGCTGCTGGGTTTC+GGG | 0.216331 | 2_3:-59415880 | None:intergenic |
| GGCGGTGAGCTGCTGGGTTT+CGG | 0.223917 | 2_3:-59415881 | None:intergenic |
| CCAACCTGCGATTGAGAGTT+AGG | 0.243850 | 2_3:-59415985 | None:intergenic |
| TGCAGTCGTTCGTGCTGTTT+TGG | 0.269177 | 2_3:+59419628 | Msa0302610:intron |
| TACAGTTGGCGGTGAGCTGC+TGG | 0.281463 | 2_3:-59415888 | None:intergenic |
| CTCATGGCATTTACTTCACT+TGG | 0.282833 | 2_3:+59417521 | Msa0302610:CDS |
| ATGACTCAGGATAGAAGTTT+TGG | 0.300932 | 2_3:+59420349 | Msa0302610:three_prime_UTR |
| ATCAATTAGCACACGGTTCC+AGG | 0.313302 | 2_3:-59417588 | None:intergenic |
| TCCATTGCTTGATTTCTTCT+CGG | 0.315232 | 2_3:-59417219 | None:intergenic |
| TTGTGATATAGATTGCAATT+TGG | 0.322723 | 2_3:+59420302 | Msa0302610:three_prime_UTR |
| TCATGTGTAATTTAATATAG+TGG | 0.329218 | 2_3:+59420208 | Msa0302610:three_prime_UTR |
| AAGTTTACATTGTTTAAAAT+CGG | 0.333615 | 2_3:-59420164 | None:intergenic |
| GATATTGTTTCATACGGAAT+TGG | 0.336798 | 2_3:-59420325 | None:intergenic |
| TGGCTTTCTCGGTGGTCTAA+TGG | 0.351497 | 2_3:+59417610 | Msa0302610:CDS |
| TCCACACATACTTTGATTCC+TGG | 0.356999 | 2_3:+59417570 | Msa0302610:CDS |
| GTGCTAATTGATGGCTTTCT+CGG | 0.375720 | 2_3:+59417599 | Msa0302610:CDS |
| GGTTTGCGAGAATAGTGAAT+TGG | 0.395882 | 2_3:-59415963 | None:intergenic |
| TCAAATTAGACAGAATATAA+TGG | 0.404061 | 2_3:+59417172 | Msa0302610:exon |
| ACATGAAAATCATCTATTAC+AGG | 0.411097 | 2_3:+59417285 | Msa0302610:CDS |
| ATAATTGGCGGAGTTGTTGC+TGG | 0.426188 | 2_3:+59417452 | Msa0302610:CDS |
| GTCATTGATATTGTTTCATA+CGG | 0.448634 | 2_3:-59420331 | None:intergenic |
| TGGAACCGTGTGCTAATTGA+TGG | 0.451359 | 2_3:+59417590 | Msa0302610:CDS |
| AGTTTACATTGTTTAAAATC+GGG | 0.453445 | 2_3:-59420163 | None:intergenic |
| GTTTGCGAGAATAGTGAATT+GGG | 0.460895 | 2_3:-59415962 | None:intergenic |
| ATATAATGGCTGGACATTCT+GGG | 0.478026 | 2_3:+59417186 | Msa0302610:exon |
| ATGGCTGGACATTCTGGGTC+AGG | 0.478468 | 2_3:+59417191 | Msa0302610:CDS |
| CCAAAATTCTATACAGTTGG+CGG | 0.487071 | 2_3:-59415899 | None:intergenic |
| ATCCCAAAATTCTATACAGT+TGG | 0.491941 | 2_3:-59415902 | None:intergenic |
| CAACCTGCGATTGAGAGTTA+GGG | 0.496827 | 2_3:-59415984 | None:intergenic |
| TTGGGATTTACAGGCTTGAA+AGG | 0.504477 | 2_3:+59417479 | Msa0302610:CDS |
| CATGTGTAATTTAATATAGT+GGG | 0.504632 | 2_3:+59420209 | Msa0302610:three_prime_UTR |
| ACAGTTGGCGGTGAGCTGCT+GGG | 0.512887 | 2_3:-59415887 | None:intergenic |
| CAATTATAGATAAGAATGTT+CGG | 0.514534 | 2_3:-59417436 | None:intergenic |
| TGTCTTCTACGCACTTCTCA+TGG | 0.518149 | 2_3:+59417505 | Msa0302610:CDS |
| ATTAGACAGAATATAATGGC+TGG | 0.519991 | 2_3:+59417176 | Msa0302610:exon |
| TCATGGCATTTACTTCACTT+GGG | 0.520496 | 2_3:+59417522 | Msa0302610:CDS |
| GAAAACTATCTCATAAGTGA+AGG | 0.539622 | 2_3:-59420132 | None:intergenic |
| ACATTCTTATCTATAATTGG+CGG | 0.544008 | 2_3:+59417440 | Msa0302610:CDS |
| TGAAACAATATCAATGACTC+AGG | 0.563332 | 2_3:+59420336 | Msa0302610:three_prime_UTR |
| ACTGATATTGGTTCAACTGA+AGG | 0.570117 | 2_3:+59415835 | Msa0302610:five_prime_UTR |
| TGGTTCAACTGAAGGCGCAT+TGG | 0.571040 | 2_3:+59415843 | Msa0302610:five_prime_UTR |
| AAACCCTAACTCTCAATCGC+AGG | 0.576047 | 2_3:+59415981 | Msa0302610:five_prime_UTR |
| AAAACTATCTCATAAGTGAA+GGG | 0.593124 | 2_3:-59420131 | None:intergenic |
| TCCGAGAAGAAATCAAGCAA+TGG | 0.610929 | 2_3:+59417218 | Msa0302610:CDS |
| TCCAGGAATCAAAGTATGTG+TGG | 0.614397 | 2_3:-59417571 | None:intergenic |
| GTGGGAAGCACTCAATGTCG+AGG | 0.615276 | 2_3:+59420227 | Msa0302610:three_prime_UTR |
| TCAATGTCGAGGGCTTGTTG+TGG | 0.619681 | 2_3:+59420238 | Msa0302610:three_prime_UTR |
| CTAATTGATGGCTTTCTCGG+TGG | 0.637534 | 2_3:+59417602 | Msa0302610:CDS |
| TGGGAAGCACTCAATGTCGA+GGG | 0.640688 | 2_3:+59420228 | Msa0302610:three_prime_UTR |
| GAAAGCCATCAATTAGCACA+CGG | 0.703061 | 2_3:-59417595 | None:intergenic |
| GCTGGGTTTCGGGAACAAAG+CGG | 0.715415 | 2_3:-59415870 | None:intergenic |
| AAAACATTTGCACATCCCAG+CGG | 0.738345 | 2_3:-59420052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATAGTTTCTTTAATTTATT+TGG | + | chr2_3:59416091-59416110 | Msa0302610:intron | 10.0% |
| !!! | ATAGTTTCTTTAATTTATTT+GGG | + | chr2_3:59416092-59416111 | Msa0302610:intron | 10.0% |
| !!! | GTAAATTTTACATATAAATA+AGG | - | chr2_3:59418351-59418370 | None:intergenic | 10.0% |
| !!! | CCATAATTATTTTAATATAT+CGG | + | chr2_3:59419397-59419416 | Msa0302610:intron | 10.0% |
| !! | AAAATTTCAATATGATATAA+AGG | - | chr2_3:59419429-59419448 | None:intergenic | 10.0% |
| !! | ATTATCAAATATGTTAAAAA+TGG | + | chr2_3:59419704-59419723 | Msa0302610:intron | 10.0% |
| !! | ATAAATATGAAAAGAAATTT+GGG | + | chr2_3:59419763-59419782 | Msa0302610:intron | 10.0% |
| !! | GTATATATTCAATATGTATA+CGG | - | chr2_3:59416188-59416207 | None:intergenic | 15.0% |
| !!! | TCTAAATTTTATTTTCTTTG+TGG | - | chr2_3:59417777-59417796 | None:intergenic | 15.0% |
| !!! | AAAATAAAATTTAGAATGTC+AGG | + | chr2_3:59417782-59417801 | Msa0302610:intron | 15.0% |
| !!! | AAATAAAATTTAGAATGTCA+GGG | + | chr2_3:59417783-59417802 | Msa0302610:intron | 15.0% |
| !! | TCTATTAAAAAATATTGACA+AGG | - | chr2_3:59418002-59418021 | None:intergenic | 15.0% |
| !! | TTAGTATGATTAATAACTAA+AGG | - | chr2_3:59418373-59418392 | None:intergenic | 15.0% |
| !! | TATATAATTGCTGAATAAAT+GGG | - | chr2_3:59418875-59418894 | None:intergenic | 15.0% |
| !! | ATATATAATTGCTGAATAAA+TGG | - | chr2_3:59418876-59418895 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTATTTCCTAAAA+GGG | - | chr2_3:59419205-59419224 | None:intergenic | 15.0% |
| !! | ATATTAAAATAATTATGGAC+CGG | - | chr2_3:59419395-59419414 | None:intergenic | 15.0% |
| !! | CCGATATATTAAAATAATTA+TGG | - | chr2_3:59419400-59419419 | None:intergenic | 15.0% |
| !!! | TTATTTTAATATATCGGATA+AGG | + | chr2_3:59419403-59419422 | Msa0302610:intron | 15.0% |
| !!! | TTTTTCATAATTGTATCAAA+AGG | + | chr2_3:59419734-59419753 | Msa0302610:intron | 15.0% |
| !! | CATAAATATGAAAAGAAATT+TGG | + | chr2_3:59419762-59419781 | Msa0302610:intron | 15.0% |
| !!! | AAGTTTACATTGTTTAAAAT+CGG | - | chr2_3:59420167-59420186 | None:intergenic | 15.0% |
| !! | CAAATTTGTACCAAAAAAAA+TGG | - | chr2_3:59416489-59416508 | None:intergenic | 20.0% |
| !!! | AGTTGTTTTCCAATTTTAAA+AGG | + | chr2_3:59416522-59416541 | Msa0302610:intron | 20.0% |
| !!! | GTTGTTTTCCAATTTTAAAA+GGG | + | chr2_3:59416523-59416542 | Msa0302610:intron | 20.0% |
| !!! | TTGTTTTCCAATTTTAAAAG+GGG | + | chr2_3:59416524-59416543 | Msa0302610:intron | 20.0% |
| !! | TCATAAGATCTATGTTATTA+CGG | - | chr2_3:59416565-59416584 | None:intergenic | 20.0% |
| !! | TAATCAGTTGAATCTTAATA+TGG | - | chr2_3:59416835-59416854 | None:intergenic | 20.0% |
| !!! | TATTAGTAGTTACTTTGTTA+GGG | - | chr2_3:59417069-59417088 | None:intergenic | 20.0% |
| !!! | ATATTAGTAGTTACTTTGTT+AGG | - | chr2_3:59417070-59417089 | None:intergenic | 20.0% |
| !! | TCAAATTAGACAGAATATAA+TGG | + | chr2_3:59417172-59417191 | Msa0302610:exon | 20.0% |
| !! | AAGTAAACATAGTATTAAGA+AGG | - | chr2_3:59417326-59417345 | None:intergenic | 20.0% |
| !! | CAATTATAGATAAGAATGTT+CGG | - | chr2_3:59417439-59417458 | None:intergenic | 20.0% |
| !!! | AGATAGAGAATATTTTCAAT+TGG | - | chr2_3:59418610-59418629 | None:intergenic | 20.0% |
| !!! | AGATTTTCTAATGTTCTTAA+AGG | + | chr2_3:59419095-59419114 | Msa0302610:intron | 20.0% |
| !!! | TTCTTTTTATTTCCTAAAAG+GGG | - | chr2_3:59419204-59419223 | None:intergenic | 20.0% |
| !!! | CTTTCTTTTTATTTCCTAAA+AGG | - | chr2_3:59419206-59419225 | None:intergenic | 20.0% |
| !! | AGATCATAATAATGTATATG+TGG | + | chr2_3:59419518-59419537 | Msa0302610:intron | 20.0% |
| !! | GATCATAATAATGTATATGT+GGG | + | chr2_3:59419519-59419538 | Msa0302610:intron | 20.0% |
| !! | ATCATAATAATGTATATGTG+GGG | + | chr2_3:59419520-59419539 | Msa0302610:intron | 20.0% |
| !! | ATTCAAGCATAAAATGTATA+GGG | - | chr2_3:59419566-59419585 | None:intergenic | 20.0% |
| !!! | AGTTTACATTGTTTAAAATC+GGG | - | chr2_3:59420166-59420185 | None:intergenic | 20.0% |
| !! | TCATGTGTAATTTAATATAG+TGG | + | chr2_3:59420208-59420227 | Msa0302610:three_prime_UTR | 20.0% |
| !! | CATGTGTAATTTAATATAGT+GGG | + | chr2_3:59420209-59420228 | Msa0302610:three_prime_UTR | 20.0% |
| !! | TTTAATTTATTTGGGCCATT+AGG | + | chr2_3:59416100-59416119 | Msa0302610:intron | 25.0% |
| ! | TAGCATATAACATGGATATA+TGG | + | chr2_3:59416130-59416149 | Msa0302610:intron | 25.0% |
| ! | TTTGTCGACATTATATTGTT+TGG | + | chr2_3:59416235-59416254 | Msa0302610:intron | 25.0% |
| ! | GTAAGGAATAAATAAGAAGT+TGG | - | chr2_3:59416276-59416295 | None:intergenic | 25.0% |
| ! | GAAAACAACTCTGTTATTAA+GGG | - | chr2_3:59416512-59416531 | None:intergenic | 25.0% |
| !!! | TTTGATTCCCCTTTTAAAAT+TGG | - | chr2_3:59416534-59416553 | None:intergenic | 25.0% |
| ! | AGTCAGATAGAGATTAATAA+AGG | - | chr2_3:59416892-59416911 | None:intergenic | 25.0% |
| !! | ATTAGTAGTTACTTTGTTAG+GGG | - | chr2_3:59417068-59417087 | None:intergenic | 25.0% |
| !! | ATTCAATGACTTTTACTGAA+AGG | - | chr2_3:59417125-59417144 | None:intergenic | 25.0% |
| ! | ACATGAAAATCATCTATTAC+AGG | + | chr2_3:59417285-59417304 | Msa0302610:CDS | 25.0% |
| ! | AAAATCATCTATTACAGGTT+TGG | + | chr2_3:59417290-59417309 | Msa0302610:intron | 25.0% |
| ! | CGAACATTCTTATCTATAAT+TGG | + | chr2_3:59417437-59417456 | Msa0302610:CDS | 25.0% |
| ! | ACATTCTTATCTATAATTGG+CGG | + | chr2_3:59417440-59417459 | Msa0302610:CDS | 25.0% |
| !! | TTAGTTAATAAGCTCTAGTT+TGG | - | chr2_3:59417845-59417864 | None:intergenic | 25.0% |
| ! | TTATTAACTAATAGAATCCC+CGG | + | chr2_3:59417854-59417873 | Msa0302610:intron | 25.0% |
| ! | GTATATTCTTTATGCCATAA+AGG | + | chr2_3:59417898-59417917 | Msa0302610:intron | 25.0% |
| ! | ATTCAAACGAAAAACATCTA+AGG | - | chr2_3:59418069-59418088 | None:intergenic | 25.0% |
| !! | TAGAGTATCAGGAAATATTA+TGG | - | chr2_3:59418144-59418163 | None:intergenic | 25.0% |
| !! | TGCTGTATTTTCTAATTCTA+GGG | + | chr2_3:59418289-59418308 | Msa0302610:intron | 25.0% |
| ! | TAAATAAGGTCAATAACAGT+TGG | - | chr2_3:59418337-59418356 | None:intergenic | 25.0% |
| ! | TAGTACTAGATGTTAATTGT+AGG | - | chr2_3:59418659-59418678 | None:intergenic | 25.0% |
| ! | AAGGAATTTAATATTCATGG+AGG | - | chr2_3:59418747-59418766 | None:intergenic | 25.0% |
| ! | CACAAGGAATTTAATATTCA+TGG | - | chr2_3:59418750-59418769 | None:intergenic | 25.0% |
| ! | CTAGGTAAGTAATAATTATC+AGG | - | chr2_3:59418812-59418831 | None:intergenic | 25.0% |
| !!! | AATAAATGGGTTAACAAGTA+TGG | - | chr2_3:59418862-59418881 | None:intergenic | 25.0% |
| !! | TTTCAAAACATGTATTTCTG+TGG | + | chr2_3:59418923-59418942 | Msa0302610:intron | 25.0% |
| !! | TTTCAAAACATGTATTTCTG+TGG | + | chr2_3:59418923-59418942 | Msa0302610:intron | 25.0% |
| !!! | TCTTTTTATTTCCTAAAAGG+GGG | - | chr2_3:59419203-59419222 | None:intergenic | 25.0% |
| !!! | CAACTTGCTATTCATATTAT+TGG | + | chr2_3:59419229-59419248 | Msa0302610:intron | 25.0% |
| ! | TCATAATAATGTATATGTGG+GGG | + | chr2_3:59419521-59419540 | Msa0302610:intron | 25.0% |
| ! | CATTCAAGCATAAAATGTAT+AGG | - | chr2_3:59419567-59419586 | None:intergenic | 25.0% |
| ! | AAGTATTATTGACAAAGAGA+AGG | - | chr2_3:59419660-59419679 | None:intergenic | 25.0% |
| ! | TTCTCTTTGTCAATAATACT+TGG | + | chr2_3:59419659-59419678 | Msa0302610:intron | 25.0% |
| ! | ATATGAAAAGAAATTTGGGT+TGG | + | chr2_3:59419767-59419786 | Msa0302610:intron | 25.0% |
| ! | TTGAAATGTTATGAATACAC+CGG | + | chr2_3:59419832-59419851 | Msa0302610:intron | 25.0% |
| ! | AAAACTATCTCATAAGTGAA+GGG | - | chr2_3:59420134-59420153 | None:intergenic | 25.0% |
| ! | TTGTGATATAGATTGCAATT+TGG | + | chr2_3:59420302-59420321 | Msa0302610:three_prime_UTR | 25.0% |
| ! | GTCATTGATATTGTTTCATA+CGG | - | chr2_3:59420334-59420353 | None:intergenic | 25.0% |
| ATCCCAAAATTCTATACAGT+TGG | - | chr2_3:59415905-59415924 | None:intergenic | 30.0% | |
| CTCTGTGTAATAATCATAAG+AGG | + | chr2_3:59416030-59416049 | Msa0302610:intron | 30.0% | |
| AAGAAACTATTGCAGCTATT+TGG | - | chr2_3:59416082-59416101 | None:intergenic | 30.0% | |
| ATATGCTAGTTGAATCCTAA+TGG | - | chr2_3:59416118-59416137 | None:intergenic | 30.0% | |
| GATTCAACTAGCATATAACA+TGG | + | chr2_3:59416122-59416141 | Msa0302610:intron | 30.0% | |
| ! | CCAAAATTGGGAGTTAATTT+TGG | - | chr2_3:59416461-59416480 | None:intergenic | 30.0% |
| ! | CCAAAATTAACTCCCAATTT+TGG | + | chr2_3:59416458-59416477 | Msa0302610:intron | 30.0% |
| AAAATGGTCAGACCAAAATT+GGG | - | chr2_3:59416473-59416492 | None:intergenic | 30.0% | |
| AAAAATGGTCAGACCAAAAT+TGG | - | chr2_3:59416474-59416493 | None:intergenic | 30.0% | |
| !!! | TTTGGTCTGACCATTTTTTT+TGG | + | chr2_3:59416476-59416495 | Msa0302610:intron | 30.0% |
| GGAAAACAACTCTGTTATTA+AGG | - | chr2_3:59416513-59416532 | None:intergenic | 30.0% | |
| ! | ATTAGTGTTTTTCTTTCGCT+AGG | + | chr2_3:59416670-59416689 | Msa0302610:intron | 30.0% |
| AGCACATATAGTAGAAAAGA+TGG | - | chr2_3:59416940-59416959 | None:intergenic | 30.0% | |
| TGAATTACCTTTCTGTTTAC+AGG | + | chr2_3:59417140-59417159 | Msa0302610:intron | 30.0% | |
| ATTAGACAGAATATAATGGC+TGG | + | chr2_3:59417176-59417195 | Msa0302610:exon | 30.0% | |
| CATGAATGAAGAAATCAGTT+TGG | + | chr2_3:59417697-59417716 | Msa0302610:intron | 30.0% | |
| GAAATCAGTTTGGATAAGAT+AGG | + | chr2_3:59417707-59417726 | Msa0302610:intron | 30.0% | |
| GAGTAAACACACATACAAAT+AGG | + | chr2_3:59417737-59417756 | Msa0302610:intron | 30.0% | |
| AAAAGACACATCAACAGTTT+AGG | + | chr2_3:59417814-59417833 | Msa0302610:intron | 30.0% | |
| AAAGACACATCAACAGTTTA+GGG | + | chr2_3:59417815-59417834 | Msa0302610:intron | 30.0% | |
| ! | CCTTCATAAGTTCAAACTTT+TGG | - | chr2_3:59418168-59418187 | None:intergenic | 30.0% |
| CCAAAAGTTTGAACTTATGA+AGG | + | chr2_3:59418165-59418184 | Msa0302610:intron | 30.0% | |
| ! | GTGCTGTATTTTCTAATTCT+AGG | + | chr2_3:59418288-59418307 | Msa0302610:intron | 30.0% |
| !! | CTAGTAACCTTTGAAATCAT+CGG | + | chr2_3:59418422-59418441 | Msa0302610:intron | 30.0% |
| GAAAAAATGATTTCGACTCT+TGG | - | chr2_3:59418540-59418559 | None:intergenic | 30.0% | |
| !!! | ATCATTTTTTCCAGGTTACA+TGG | + | chr2_3:59418549-59418568 | Msa0302610:intron | 30.0% |
| ! | GTAGGAACTTTAATTTCTCT+AGG | - | chr2_3:59418641-59418660 | None:intergenic | 30.0% |
| GGAGAAAGACAAAATAATCA+AGG | + | chr2_3:59418716-59418735 | Msa0302610:intron | 30.0% | |
| TCTAGGTAAATCTTAGGTTA+GGG | - | chr2_3:59418775-59418794 | None:intergenic | 30.0% | |
| TTCTAGGTAAATCTTAGGTT+AGG | - | chr2_3:59418776-59418795 | None:intergenic | 30.0% | |
| AATTATCAGGTTAGACACTT+GGG | - | chr2_3:59418799-59418818 | None:intergenic | 30.0% | |
| TAATTATCAGGTTAGACACT+TGG | - | chr2_3:59418800-59418819 | None:intergenic | 30.0% | |
| TTAACAAGTATGGTTTAGCT+AGG | - | chr2_3:59418852-59418871 | None:intergenic | 30.0% | |
| !! | CTTTTTATTTCCTAAAAGGG+GGG | - | chr2_3:59419202-59419221 | None:intergenic | 30.0% |
| TATTATTGGCATCCCTTATA+TGG | + | chr2_3:59419243-59419262 | Msa0302610:intron | 30.0% | |
| AACATCAGAAGTCCATATAA+GGG | - | chr2_3:59419258-59419277 | None:intergenic | 30.0% | |
| AAACATCAGAAGTCCATATA+AGG | - | chr2_3:59419259-59419278 | None:intergenic | 30.0% | |
| CATAATAATGTATATGTGGG+GGG | + | chr2_3:59419522-59419541 | Msa0302610:intron | 30.0% | |
| !! | TTGTTAAGTTGAATGAGCAT+GGG | - | chr2_3:59419889-59419908 | None:intergenic | 30.0% |
| !! | ATTGTTAAGTTGAATGAGCA+TGG | - | chr2_3:59419890-59419909 | None:intergenic | 30.0% |
| !!! | GTTTTAGGTTGTGTTTTAGT+AGG | - | chr2_3:59419929-59419948 | None:intergenic | 30.0% |
| AAAACACAACCTAAAACAAC+CGG | + | chr2_3:59419932-59419951 | Msa0302610:intron | 30.0% | |
| ! | TGCAAATCTGTATTTTGTCA+AGG | - | chr2_3:59420008-59420027 | None:intergenic | 30.0% |
| GAAAACTATCTCATAAGTGA+AGG | - | chr2_3:59420135-59420154 | None:intergenic | 30.0% | |
| GATATTGTTTCATACGGAAT+TGG | - | chr2_3:59420328-59420347 | None:intergenic | 30.0% | |
| TGAAACAATATCAATGACTC+AGG | + | chr2_3:59420336-59420355 | Msa0302610:three_prime_UTR | 30.0% | |
| !! | ACTGATATTGGTTCAACTGA+AGG | + | chr2_3:59415835-59415854 | Msa0302610:five_prime_UTR | 35.0% |
| CCAAAATTCTATACAGTTGG+CGG | - | chr2_3:59415902-59415921 | None:intergenic | 35.0% | |
| ! | CGCCAACTGTATAGAATTTT+GGG | + | chr2_3:59415900-59415919 | Msa0302610:five_prime_UTR | 35.0% |
| GTTTGCGAGAATAGTGAATT+GGG | - | chr2_3:59415965-59415984 | None:intergenic | 35.0% | |
| ! | GAGAAGTGCGATTTAAAGAA+AGG | - | chr2_3:59416013-59416032 | None:intergenic | 35.0% |
| !! | GGATTGATTTTGCAGACAAT+AGG | + | chr2_3:59416051-59416070 | Msa0302610:intron | 35.0% |
| !! | ACATCTGATTTGAAGCGTTT+TGG | + | chr2_3:59416154-59416173 | Msa0302610:intron | 35.0% |
| CTTACTATGAAGCACAGATA+CGG | + | chr2_3:59416291-59416310 | Msa0302610:intron | 35.0% | |
| !! | GAATCTATGAAGTACTGTGT+CGG | - | chr2_3:59416339-59416358 | None:intergenic | 35.0% |
| !! | AGATTCCTTAGTTTGTACTC+TGG | + | chr2_3:59416353-59416372 | Msa0302610:intron | 35.0% |
| !! | CTAGTCTTATCTCACTAAGT+GGG | + | chr2_3:59416765-59416784 | Msa0302610:intron | 35.0% |
| !! | TAGTCTTATCTCACTAAGTG+GGG | + | chr2_3:59416766-59416785 | Msa0302610:intron | 35.0% |
| TAGAAAAGATGGTGCAAACT+AGG | - | chr2_3:59416929-59416948 | None:intergenic | 35.0% | |
| GACATCATTAGAGAAAGAGT+TGG | - | chr2_3:59416966-59416985 | None:intergenic | 35.0% | |
| CGAAAAATAAGATGTTGCGT+TGG | - | chr2_3:59417025-59417044 | None:intergenic | 35.0% | |
| ! | TAGTTACTTTGTTAGGGGAA+GGG | - | chr2_3:59417063-59417082 | None:intergenic | 35.0% |
| ATCTGTTCCTGTAAACAGAA+AGG | - | chr2_3:59417150-59417169 | None:intergenic | 35.0% | |
| AATATAATGGCTGGACATTC+TGG | + | chr2_3:59417185-59417204 | Msa0302610:exon | 35.0% | |
| ATATAATGGCTGGACATTCT+GGG | + | chr2_3:59417186-59417205 | Msa0302610:exon | 35.0% | |
| TCCATTGCTTGATTTCTTCT+CGG | - | chr2_3:59417222-59417241 | None:intergenic | 35.0% | |
| TGACTGTTCAATGTTGTCTA+TGG | + | chr2_3:59417380-59417399 | Msa0302610:intron | 35.0% | |
| TCATGGCATTTACTTCACTT+GGG | + | chr2_3:59417522-59417541 | Msa0302610:CDS | 35.0% | |
| CACTTAGAGAGACTATGAAA+AGG | + | chr2_3:59418035-59418054 | Msa0302610:intron | 35.0% | |
| !! | AAACTTTTGGCTAGAGTATC+AGG | - | chr2_3:59418155-59418174 | None:intergenic | 35.0% |
| AAAATGCTTCAACTGTTGAG+AGG | + | chr2_3:59418188-59418207 | Msa0302610:intron | 35.0% | |
| CAAGCAGCTAATTACATTTG+GGG | - | chr2_3:59418251-59418270 | None:intergenic | 35.0% | |
| GCAAGCAGCTAATTACATTT+GGG | - | chr2_3:59418252-59418271 | None:intergenic | 35.0% | |
| !! | CAGCACGTTTATTTTCACAA+TGG | - | chr2_3:59418274-59418293 | None:intergenic | 35.0% |
| AAGGTTACTAGTAGATTCAC+AGG | - | chr2_3:59418413-59418432 | None:intergenic | 35.0% | |
| AGAAAAATTTCTGCCAGAGA+AGG | - | chr2_3:59418451-59418470 | None:intergenic | 35.0% | |
| ! | GGCAGAAATTTTTCTCTGTT+TGG | + | chr2_3:59418456-59418475 | Msa0302610:intron | 35.0% |
| !!! | GAGTCGAAATCATTTTTTCC+AGG | + | chr2_3:59418541-59418560 | Msa0302610:intron | 35.0% |
| AGATCATAAGAGACTGATAC+TGG | + | chr2_3:59418694-59418713 | Msa0302610:intron | 35.0% | |
| GATCATAAGAGACTGATACT+GGG | + | chr2_3:59418695-59418714 | Msa0302610:intron | 35.0% | |
| !! | TTGGGTTCTAGGTAAATCTT+AGG | - | chr2_3:59418781-59418800 | None:intergenic | 35.0% |
| !!! | GTGATCACTTTTGCTATTAC+TGG | + | chr2_3:59418970-59418989 | Msa0302610:intron | 35.0% |
| ACTTCTGATGTTTGTTTGAG+CGG | + | chr2_3:59419266-59419285 | Msa0302610:intron | 35.0% | |
| !! | TTCCCTTAATTTGCAGAGAA+AGG | - | chr2_3:59419345-59419364 | None:intergenic | 35.0% |
| AGGGAAAAGAGAGATAGAAA+AGG | + | chr2_3:59419359-59419378 | Msa0302610:intron | 35.0% | |
| GGGAAAAGAGAGATAGAAAA+GGG | + | chr2_3:59419360-59419379 | Msa0302610:intron | 35.0% | |
| GGAAAAGAGAGATAGAAAAG+GGG | + | chr2_3:59419361-59419380 | Msa0302610:intron | 35.0% | |
| AAATGTATAGGGAGCAAAAG+AGG | - | chr2_3:59419555-59419574 | None:intergenic | 35.0% | |
| !! | AAAAGAAATTTGGGTTGGTG+AGG | + | chr2_3:59419772-59419791 | Msa0302610:intron | 35.0% |
| AAATGTTATGAATACACCGG+TGG | + | chr2_3:59419835-59419854 | Msa0302610:intron | 35.0% | |
| AGAAAATCTGAAAGTTCCAC+CGG | - | chr2_3:59419854-59419873 | None:intergenic | 35.0% | |
| AGATAGATATGCAGGAATAC+CGG | - | chr2_3:59419954-59419973 | None:intergenic | 35.0% | |
| TAAGCAGAAGATAGATATGC+AGG | - | chr2_3:59419962-59419981 | None:intergenic | 35.0% | |
| !!! | AGACAGTTTTTTCTCCATTG+CGG | + | chr2_3:59420081-59420100 | Msa0302610:three_prime_UTR | 35.0% |
| ! | TTCATTTTGAATAGCCGCAA+TGG | - | chr2_3:59420098-59420117 | None:intergenic | 35.0% |
| ! | ATGACTCAGGATAGAAGTTT+TGG | + | chr2_3:59420349-59420368 | Msa0302610:three_prime_UTR | 35.0% |
| ! | CCGCCAACTGTATAGAATTT+TGG | + | chr2_3:59415899-59415918 | Msa0302610:five_prime_UTR | 40.0% |
| GGTTTGCGAGAATAGTGAAT+TGG | - | chr2_3:59415966-59415985 | None:intergenic | 40.0% | |
| !! | CTGATTTGAAGCGTTTTGGT+TGG | + | chr2_3:59416158-59416177 | Msa0302610:intron | 40.0% |
| CGTATCTGTGCTTCATAGTA+AGG | - | chr2_3:59416293-59416312 | None:intergenic | 40.0% | |
| TACAAAGAAACACTGCACTG+TGG | - | chr2_3:59416418-59416437 | None:intergenic | 40.0% | |
| TTTCGCTAGGAGTTATATGC+AGG | + | chr2_3:59416683-59416702 | Msa0302610:intron | 40.0% | |
| TTATATGCAGGAAGTCCACA+GGG | + | chr2_3:59416695-59416714 | Msa0302610:intron | 40.0% | |
| ! | AGGTTGTTGTTGTTGTTGGA+GGG | - | chr2_3:59416747-59416766 | None:intergenic | 40.0% |
| ! | TAGGTTGTTGTTGTTGTTGG+AGG | - | chr2_3:59416748-59416767 | None:intergenic | 40.0% |
| ! | GACTAGGTTGTTGTTGTTGT+TGG | - | chr2_3:59416751-59416770 | None:intergenic | 40.0% |
| CCACTTAGTGAGATAAGACT+AGG | - | chr2_3:59416767-59416786 | None:intergenic | 40.0% | |
| !! | CCTAGTCTTATCTCACTAAG+TGG | + | chr2_3:59416764-59416783 | Msa0302610:intron | 40.0% |
| ! | AGTTACTTTGTTAGGGGAAG+GGG | - | chr2_3:59417062-59417081 | None:intergenic | 40.0% |
| ! | GTAGTTACTTTGTTAGGGGA+AGG | - | chr2_3:59417064-59417083 | None:intergenic | 40.0% |
| TCCGAGAAGAAATCAAGCAA+TGG | + | chr2_3:59417218-59417237 | Msa0302610:CDS | 40.0% | |
| ! | GGAGTTGTTGCTGGTATTTT+GGG | + | chr2_3:59417461-59417480 | Msa0302610:CDS | 40.0% |
| !!! | GCTGGTATTTTGGGATTTAC+AGG | + | chr2_3:59417470-59417489 | Msa0302610:CDS | 40.0% |
| TTGGGATTTACAGGCTTGAA+AGG | + | chr2_3:59417479-59417498 | Msa0302610:CDS | 40.0% | |
| CTCATGGCATTTACTTCACT+TGG | + | chr2_3:59417521-59417540 | Msa0302610:CDS | 40.0% | |
| TCCACACATACTTTGATTCC+TGG | + | chr2_3:59417570-59417589 | Msa0302610:CDS | 40.0% | |
| TCCAGGAATCAAAGTATGTG+TGG | - | chr2_3:59417574-59417593 | None:intergenic | 40.0% | |
| GAAAGCCATCAATTAGCACA+CGG | - | chr2_3:59417598-59417617 | None:intergenic | 40.0% | |
| ! | GTGCTAATTGATGGCTTTCT+CGG | + | chr2_3:59417599-59417618 | Msa0302610:CDS | 40.0% |
| TGACCTCATTCATGTTGTTC+CGG | - | chr2_3:59417876-59417895 | None:intergenic | 40.0% | |
| TTATGCCATAAAGGATGCAG+TGG | + | chr2_3:59417907-59417926 | Msa0302610:intron | 40.0% | |
| ! | TATCTCGTGGAATCTTTTGC+TGG | - | chr2_3:59418104-59418123 | None:intergenic | 40.0% |
| GAACTTTGCAAACTATCTCG+TGG | - | chr2_3:59418117-59418136 | None:intergenic | 40.0% | |
| TAGTCACCAGACACACTAAA+TGG | + | chr2_3:59418221-59418240 | Msa0302610:intron | 40.0% | |
| ! | CAGCTAATTACATTTGGGGT+AGG | - | chr2_3:59418247-59418266 | None:intergenic | 40.0% |
| GGCAAGCAGCTAATTACATT+TGG | - | chr2_3:59418253-59418272 | None:intergenic | 40.0% | |
| AAGGTCACCGATGATTTCAA+AGG | - | chr2_3:59418432-59418451 | None:intergenic | 40.0% | |
| CTCTGTTTGGACTCAGAAAA+TGG | + | chr2_3:59418469-59418488 | Msa0302610:intron | 40.0% | |
| TGTTCATTTGCCATGTAACC+TGG | - | chr2_3:59418562-59418581 | None:intergenic | 40.0% | |
| AGGTTACATGGCAAATGAAC+AGG | + | chr2_3:59418561-59418580 | Msa0302610:intron | 40.0% | |
| GGTTACATGGCAAATGAACA+GGG | + | chr2_3:59418562-59418581 | Msa0302610:intron | 40.0% | |
| ! | ATTTACTGACTGGGAGAGAA+CGG | - | chr2_3:59419317-59419336 | None:intergenic | 40.0% |
| TCTCTCCCAGTCAGTAAATT+AGG | + | chr2_3:59419318-59419337 | Msa0302610:intron | 40.0% | |
| CTCTCCCAGTCAGTAAATTA+GGG | + | chr2_3:59419319-59419338 | Msa0302610:intron | 40.0% | |
| ! | AAGGCCCTAATTTACTGACT+GGG | - | chr2_3:59419326-59419345 | None:intergenic | 40.0% |
| AAAGGCCCTAATTTACTGAC+TGG | - | chr2_3:59419327-59419346 | None:intergenic | 40.0% | |
| GGCCTTTCTCTGCAAATTAA+GGG | + | chr2_3:59419340-59419359 | Msa0302610:intron | 40.0% | |
| AAAGAGAGATAGAAAAGGGG+AGG | + | chr2_3:59419364-59419383 | Msa0302610:intron | 40.0% | |
| TAGAAAAGGGGAGGTTTATC+CGG | + | chr2_3:59419373-59419392 | Msa0302610:intron | 40.0% | |
| ATTGCCTTGCTGATCTTATC+TGG | + | chr2_3:59419476-59419495 | Msa0302610:intron | 40.0% | |
| GACTGCATGGGATCAAAAAA+AGG | - | chr2_3:59419615-59419634 | None:intergenic | 40.0% | |
| !! | AATTTGGGTTGGTGAGGATT+TGG | + | chr2_3:59419778-59419797 | Msa0302610:intron | 40.0% |
| !! | ATTTGGGTTGGTGAGGATTT+GGG | + | chr2_3:59419779-59419798 | Msa0302610:intron | 40.0% |
| AAGTTGAATGAGCATGGGAA+TGG | - | chr2_3:59419884-59419903 | None:intergenic | 40.0% | |
| !!! | TGTGTTTTAGTAGGATGCTC+TGG | - | chr2_3:59419920-59419939 | None:intergenic | 40.0% |
| !!! | TGCTCATATATTTTGACCGC+TGG | + | chr2_3:59420036-59420055 | Msa0302610:exon | 40.0% |
| !!! | GCTCATATATTTTGACCGCT+GGG | + | chr2_3:59420037-59420056 | Msa0302610:exon | 40.0% |
| AAAACATTTGCACATCCCAG+CGG | - | chr2_3:59420055-59420074 | None:intergenic | 40.0% | |
| AAACCCTAACTCTCAATCGC+AGG | + | chr2_3:59415981-59416000 | Msa0302610:five_prime_UTR | 45.0% | |
| CAACCTGCGATTGAGAGTTA+GGG | - | chr2_3:59415987-59416006 | None:intergenic | 45.0% | |
| CCACTCCAGAGTACAAACTA+AGG | - | chr2_3:59416361-59416380 | None:intergenic | 45.0% | |
| !! | CCTTAGTTTGTACTCTGGAG+TGG | + | chr2_3:59416358-59416377 | Msa0302610:intron | 45.0% |
| CTGCACTGTGGTTAACAAAC+AGG | - | chr2_3:59416406-59416425 | None:intergenic | 45.0% | |
| GTTATATGCAGGAAGTCCAC+AGG | + | chr2_3:59416694-59416713 | Msa0302610:intron | 45.0% | |
| GTAGCAAAGATTGAACCCTG+TGG | - | chr2_3:59416713-59416732 | None:intergenic | 45.0% | |
| ! | GTTGTTGTTGTTGTTGGAGG+GGG | - | chr2_3:59416745-59416764 | None:intergenic | 45.0% |
| ! | GGTTGTTGTTGTTGTTGGAG+GGG | - | chr2_3:59416746-59416765 | None:intergenic | 45.0% |
| CTTATCTCACTAAGTGGGGT+CGG | + | chr2_3:59416770-59416789 | Msa0302610:intron | 45.0% | |
| TTATCTCACTAAGTGGGGTC+GGG | + | chr2_3:59416771-59416790 | Msa0302610:intron | 45.0% | |
| TGCAAACTAGGCTTAGATGG+AGG | - | chr2_3:59416917-59416936 | None:intergenic | 45.0% | |
| TGGTGCAAACTAGGCTTAGA+TGG | - | chr2_3:59416920-59416939 | None:intergenic | 45.0% | |
| AAGATGTTGCGTTGGATGTG+TGG | - | chr2_3:59417017-59417036 | None:intergenic | 45.0% | |
| ATAATTGGCGGAGTTGTTGC+TGG | + | chr2_3:59417452-59417471 | Msa0302610:CDS | 45.0% | |
| ! | CGGAGTTGTTGCTGGTATTT+TGG | + | chr2_3:59417460-59417479 | Msa0302610:CDS | 45.0% |
| TGTCTTCTACGCACTTCTCA+TGG | + | chr2_3:59417505-59417524 | Msa0302610:CDS | 45.0% | |
| ATCAATTAGCACACGGTTCC+AGG | - | chr2_3:59417591-59417610 | None:intergenic | 45.0% | |
| TGGAACCGTGTGCTAATTGA+TGG | + | chr2_3:59417590-59417609 | Msa0302610:CDS | 45.0% | |
| ! | CTAATTGATGGCTTTCTCGG+TGG | + | chr2_3:59417602-59417621 | Msa0302610:CDS | 45.0% |
| TTTCTCGGTGGTCTAATGGT+AGG | + | chr2_3:59417614-59417633 | Msa0302610:intron | 45.0% | |
| ACCTCATTCATGTTGTTCCG+GGG | - | chr2_3:59417874-59417893 | None:intergenic | 45.0% | |
| GACCTCATTCATGTTGTTCC+GGG | - | chr2_3:59417875-59417894 | None:intergenic | 45.0% | |
| ATTCACAGGCTTCGACATAG+TGG | - | chr2_3:59418399-59418418 | None:intergenic | 45.0% | |
| AAATCATCGGTGACCTTCTC+TGG | + | chr2_3:59418435-59418454 | Msa0302610:intron | 45.0% | |
| ATCTTAGGTTAGGGTGCACA+AGG | - | chr2_3:59418766-59418785 | None:intergenic | 45.0% | |
| AGGTTAGACACTTGGGTTCT+AGG | - | chr2_3:59418792-59418811 | None:intergenic | 45.0% | |
| TTAGCTAGGTGACTAAGCGT+GGG | - | chr2_3:59418838-59418857 | None:intergenic | 45.0% | |
| TTTAGCTAGGTGACTAAGCG+TGG | - | chr2_3:59418839-59418858 | None:intergenic | 45.0% | |
| ! | ACATAGCTTTCCCCCCTTTT+AGG | + | chr2_3:59419189-59419208 | Msa0302610:intron | 45.0% |
| ! | TTTACTGACTGGGAGAGAAC+GGG | - | chr2_3:59419316-59419335 | None:intergenic | 45.0% |
| GGGCCTTTCTCTGCAAATTA+AGG | + | chr2_3:59419339-59419358 | Msa0302610:intron | 45.0% | |
| CTTGCCAGATAAGATCAGCA+AGG | - | chr2_3:59419483-59419502 | None:intergenic | 45.0% | |
| !! | GCAGGAATACCGGTTGTTTT+AGG | - | chr2_3:59419944-59419963 | None:intergenic | 45.0% |
| ! | TGGTTCAACTGAAGGCGCAT+TGG | + | chr2_3:59415843-59415862 | Msa0302610:five_prime_UTR | 50.0% |
| CCAACCTGCGATTGAGAGTT+AGG | - | chr2_3:59415988-59416007 | None:intergenic | 50.0% | |
| CCTAACTCTCAATCGCAGGT+TGG | + | chr2_3:59415985-59416004 | Msa0302610:intron | 50.0% | |
| TGGCTTTCTCGGTGGTCTAA+TGG | + | chr2_3:59417610-59417629 | Msa0302610:CDS | 50.0% | |
| TCCCCGGAACAACATGAATG+AGG | + | chr2_3:59417870-59417889 | Msa0302610:intron | 50.0% | |
| CTTCGCCACTGCATCCTTTA+TGG | - | chr2_3:59417915-59417934 | None:intergenic | 50.0% | |
| GGTAGGCCATTTAGTGTGTC+TGG | - | chr2_3:59418230-59418249 | None:intergenic | 50.0% | |
| GTGACTAAGCGTGGGAATCT+AGG | - | chr2_3:59418830-59418849 | None:intergenic | 50.0% | |
| AACAGCACGAACGACTGCAT+GGG | - | chr2_3:59419627-59419646 | None:intergenic | 50.0% | |
| AAACAGCACGAACGACTGCA+TGG | - | chr2_3:59419628-59419647 | None:intergenic | 50.0% | |
| !!! | TGCAGTCGTTCGTGCTGTTT+TGG | + | chr2_3:59419628-59419647 | Msa0302610:intron | 50.0% |
| !! | TGGGAAGCACTCAATGTCGA+GGG | + | chr2_3:59420228-59420247 | Msa0302610:three_prime_UTR | 50.0% |
| !! | TCAATGTCGAGGGCTTGTTG+TGG | + | chr2_3:59420238-59420257 | Msa0302610:three_prime_UTR | 50.0% |
| GCTGGGTTTCGGGAACAAAG+CGG | - | chr2_3:59415873-59415892 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGGTACA+TGG | + | chr2_3:59416778-59416797 | Msa0302610:intron | 55.0% | |
| ATGGCTGGACATTCTGGGTC+AGG | + | chr2_3:59417191-59417210 | Msa0302610:CDS | 55.0% | |
| !! | GTGGGAAGCACTCAATGTCG+AGG | + | chr2_3:59420227-59420246 | Msa0302610:three_prime_UTR | 55.0% |
| ACAGTTGGCGGTGAGCTGCT+GGG | - | chr2_3:59415890-59415909 | None:intergenic | 60.0% | |
| TACAGTTGGCGGTGAGCTGC+TGG | - | chr2_3:59415891-59415910 | None:intergenic | 60.0% | |
| GCGGTGAGCTGCTGGGTTTC+GGG | - | chr2_3:59415883-59415902 | None:intergenic | 65.0% | |
| GGCGGTGAGCTGCTGGGTTT+CGG | - | chr2_3:59415884-59415903 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 59415829 | 59420408 | 59415829 | ID=Msa0302610;Name=Msa0302610 |
| chr2_3 | mRNA | 59415829 | 59420408 | 59415829 | ID=Msa0302610-mRNA-1;Parent=Msa0302610;Name=Msa0302610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=203|1|1|1|0.25|0.2|5|357|120 |
| chr2_3 | exon | 59415829 | 59416002 | 59415829 | ID=Msa0302610-mRNA-1:exon:19289;Parent=Msa0302610-mRNA-1 |
| chr2_3 | exon | 59417162 | 59417306 | 59417162 | ID=Msa0302610-mRNA-1:exon:19290;Parent=Msa0302610-mRNA-1 |
| chr2_3 | exon | 59417436 | 59417631 | 59417436 | ID=Msa0302610-mRNA-1:exon:19291;Parent=Msa0302610-mRNA-1 |
| chr2_3 | exon | 59419633 | 59419652 | 59419633 | ID=Msa0302610-mRNA-1:exon:19292;Parent=Msa0302610-mRNA-1 |
| chr2_3 | exon | 59420021 | 59420408 | 59420021 | ID=Msa0302610-mRNA-1:exon:19293;Parent=Msa0302610-mRNA-1 |
| chr2_3 | five_prime_UTR | 59415829 | 59416002 | 59415829 | ID=Msa0302610-mRNA-1:five_prime_utr;Parent=Msa0302610-mRNA-1 |
| chr2_3 | five_prime_UTR | 59417162 | 59417190 | 59417162 | ID=Msa0302610-mRNA-1:five_prime_utr;Parent=Msa0302610-mRNA-1 |
| chr2_3 | CDS | 59417191 | 59417306 | 59417191 | ID=Msa0302610-mRNA-1:cds;Parent=Msa0302610-mRNA-1 |
| chr2_3 | CDS | 59417436 | 59417631 | 59417436 | ID=Msa0302610-mRNA-1:cds;Parent=Msa0302610-mRNA-1 |
| chr2_3 | CDS | 59419633 | 59419652 | 59419633 | ID=Msa0302610-mRNA-1:cds;Parent=Msa0302610-mRNA-1 |
| chr2_3 | CDS | 59420021 | 59420051 | 59420021 | ID=Msa0302610-mRNA-1:cds;Parent=Msa0302610-mRNA-1 |
| chr2_3 | three_prime_UTR | 59420052 | 59420408 | 59420052 | ID=Msa0302610-mRNA-1:three_prime_utr;Parent=Msa0302610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
