Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766080 | XP_003613762.1 | 98.333 | 120 | 2 | 0 | 1 | 120 | 1 | 120 | 9.12e-78 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766080 | sp|P40590|RL34_PEA | 94.958 | 119 | 6 | 0 | 1 | 119 | 1 | 119 | 7.66e-77 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766080 | G7KF74 | 98.333 | 120 | 2 | 0 | 1 | 120 | 1 | 120 | 4.36e-78 | 235 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032810 | Msa0766080 | 0.858757 | 6.616635e-63 | -8.615850e-47 |
| Msa0038090 | Msa0766080 | 0.813962 | 1.962646e-51 | -8.615850e-47 |
| Msa0045730 | Msa0766080 | 0.821799 | 3.331042e-53 | -8.615850e-47 |
| Msa0048180 | Msa0766080 | 0.824749 | 6.818610e-54 | -8.615850e-47 |
| Msa0114570 | Msa0766080 | 0.822786 | 1.966479e-53 | -8.615850e-47 |
| Msa0116130 | Msa0766080 | 0.847980 | 8.203222e-60 | -8.615850e-47 |
| Msa0116670 | Msa0766080 | 0.843733 | 1.168617e-58 | -8.615850e-47 |
| Msa0604960 | Msa0766080 | 0.831703 | 1.436643e-55 | -8.615850e-47 |
| Msa0615580 | Msa0766080 | 0.873362 | 1.559988e-67 | -8.615850e-47 |
| Msa0619860 | Msa0766080 | 0.830579 | 2.712310e-55 | -8.615850e-47 |
| Msa0623200 | Msa0766080 | 0.838414 | 2.916647e-57 | -8.615850e-47 |
| Msa0631250 | Msa0766080 | 0.865363 | 6.236102e-65 | -8.615850e-47 |
| Msa0633570 | Msa0766080 | 0.830448 | 2.920018e-55 | -8.615850e-47 |
| Msa0656410 | Msa0766080 | 0.803606 | 3.216988e-49 | -8.615850e-47 |
| Msa0666230 | Msa0766080 | 0.866664 | 2.416972e-65 | -8.615850e-47 |
| Msa0672100 | Msa0766080 | 0.823884 | 1.089191e-53 | -8.615850e-47 |
| Msa0693210 | Msa0766080 | 0.807136 | 5.858377e-50 | -8.615850e-47 |
| Msa0698780 | Msa0766080 | 0.815055 | 1.124573e-51 | -8.615850e-47 |
| Msa0699190 | Msa0766080 | 0.811797 | 5.848468e-51 | -8.615850e-47 |
| Msa0705800 | Msa0766080 | 0.821452 | 4.007976e-53 | -8.615850e-47 |
| Msa0706500 | Msa0766080 | 0.813807 | 2.123171e-51 | -8.615850e-47 |
| Msa0712610 | Msa0766080 | 0.829560 | 4.807289e-55 | -8.615850e-47 |
| Msa0717380 | Msa0766080 | 0.813668 | 2.277677e-51 | -8.615850e-47 |
| Msa0729200 | Msa0766080 | 0.870265 | 1.663302e-66 | -8.615850e-47 |
| Msa0766080 | Msa0769590 | 0.867508 | 1.300035e-65 | -8.615850e-47 |
| Msa0766080 | Msa0781080 | 0.869357 | 3.291089e-66 | -8.615850e-47 |
| Msa0766080 | Msa0785130 | 0.868471 | 6.370561e-66 | -8.615850e-47 |
| Msa0766080 | Msa0802480 | 0.834494 | 2.902554e-56 | -8.615850e-47 |
| Msa0766080 | Msa0806880 | 0.858054 | 1.071706e-62 | -8.615850e-47 |
| Msa0766080 | Msa0808800 | 0.818519 | 1.879441e-52 | -8.615850e-47 |
| Msa0766080 | Msa0817540 | 0.827748 | 1.318186e-54 | -8.615850e-47 |
| Msa0766080 | Msa0827380 | 0.885023 | 1.162053e-71 | -8.615850e-47 |
| Msa0766080 | Msa0845550 | 0.840030 | 1.111070e-57 | -8.615850e-47 |
| Msa0766080 | Msa0861320 | 0.830150 | 3.453913e-55 | -8.615850e-47 |
| Msa0766080 | Msa0876170 | 0.849519 | 3.070094e-60 | -8.615850e-47 |
| Msa0766080 | Msa0888810 | 0.852921 | 3.361591e-61 | -8.615850e-47 |
| Msa0766080 | Msa0915540 | 0.805720 | 1.164884e-49 | -8.615850e-47 |
| Msa0766080 | Msa0945480 | 0.856824 | 2.477880e-62 | -8.615850e-47 |
| Msa0766080 | Msa0960830 | 0.809246 | 2.079944e-50 | -8.615850e-47 |
| Msa0766080 | Msa0961350 | 0.803288 | 3.744190e-49 | -8.615850e-47 |
| Msa0766080 | Msa0963020 | 0.807887 | 4.057905e-50 | -8.615850e-47 |
| Msa0766080 | Msa0970110 | 0.817895 | 2.600762e-52 | -8.615850e-47 |
| Msa0766080 | Msa0992550 | 0.807525 | 4.844860e-50 | -8.615850e-47 |
| Msa0766080 | Msa1019240 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
| Msa0766080 | Msa1019260 | 0.814648 | 1.384119e-51 | -8.615850e-47 |
| Msa0766080 | Msa1021120 | 0.840211 | 9.965159e-58 | -8.615850e-47 |
| Msa0766080 | Msa1039520 | 0.877176 | 7.748287e-69 | -8.615850e-47 |
| Msa0766080 | Msa1072710 | 0.848224 | 7.023260e-60 | -8.615850e-47 |
| Msa0766080 | Msa1080350 | 0.813046 | 3.120213e-51 | -8.615850e-47 |
| Msa0766080 | Msa1085470 | 0.826246 | 3.014646e-54 | -8.615850e-47 |
| Msa0766080 | Msa1096900 | 0.824026 | 1.008610e-53 | -8.615850e-47 |
| Msa0766080 | Msa1104210 | 0.809008 | 2.339088e-50 | -8.615850e-47 |
| Msa0766080 | Msa1125860 | 0.804103 | 2.536800e-49 | -8.615850e-47 |
| Msa0766080 | Msa1126060 | 0.803272 | 3.773986e-49 | -8.615850e-47 |
| Msa0766080 | Msa1126470 | 0.801679 | 8.035284e-49 | -8.615850e-47 |
| Msa0766080 | Msa1131560 | 0.804012 | 2.649391e-49 | -8.615850e-47 |
| Msa0766080 | Msa1165780 | 0.821361 | 4.205872e-53 | -8.615850e-47 |
| Msa0766080 | Msa1166870 | 0.827584 | 1.443286e-54 | -8.615850e-47 |
| Msa0766080 | Msa1175350 | 0.818920 | 1.523450e-52 | -8.615850e-47 |
| Msa0766080 | Msa1195300 | 0.824385 | 8.306145e-54 | -8.615850e-47 |
| Msa0766080 | Msa1202580 | 0.801330 | 9.476422e-49 | -8.615850e-47 |
| Msa0766080 | Msa1208020 | 0.845586 | 3.701906e-59 | -8.615850e-47 |
| Msa0766080 | Msa1218170 | 0.837538 | 4.901108e-57 | -8.615850e-47 |
| Msa0766080 | Msa1227690 | 0.806898 | 6.578752e-50 | -8.615850e-47 |
| Msa0766080 | Msa1230580 | 0.813707 | 2.233883e-51 | -8.615850e-47 |
| Msa0766080 | Msa1235610 | 0.821308 | 4.325738e-53 | -8.615850e-47 |
| Msa0766080 | Msa1241190 | 0.800240 | 1.581349e-48 | -8.615850e-47 |
| Msa0766080 | Msa1256840 | 0.806884 | 6.623274e-50 | -8.615850e-47 |
| Msa0766080 | Msa1299590 | 0.808812 | 2.576818e-50 | -8.615850e-47 |
| Msa0766080 | Msa1316680 | 0.822306 | 2.542296e-53 | -8.615850e-47 |
| Msa0766080 | Msa1329300 | 0.829202 | 5.872252e-55 | -8.615850e-47 |
| Msa0766080 | Msa1329540 | 0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0766080 | Msa1331250 | 0.829485 | 5.012777e-55 | -8.615850e-47 |
| Msa0766080 | Msa1332250 | 0.823424 | 1.395473e-53 | -8.615850e-47 |
| Msa0766080 | Msa1338190 | 0.807356 | 5.261134e-50 | -8.615850e-47 |
| Msa0766080 | Msa1340980 | 0.845403 | 4.150949e-59 | -8.615850e-47 |
| Msa0766080 | Msa1349570 | 0.862707 | 4.189205e-64 | -8.615850e-47 |
| Msa0766080 | Msa1356790 | 0.828370 | 9.336130e-55 | -8.615850e-47 |
| Msa0766080 | Msa1362790 | 0.851203 | 1.034302e-60 | -8.615850e-47 |
| Msa0766080 | Msa1368080 | 0.820869 | 5.461545e-53 | -8.615850e-47 |
| Msa0766080 | Msa1369190 | 0.889981 | 1.487236e-73 | -8.615850e-47 |
| Msa0766080 | Msa1374240 | 0.821410 | 4.097509e-53 | -8.615850e-47 |
| Msa0766080 | Msa1392590 | 0.813168 | 2.933488e-51 | -8.615850e-47 |
| Msa0766080 | Msa1406080 | 0.870556 | 1.335195e-66 | -8.615850e-47 |
| Msa0766080 | Msa1413260 | 0.817031 | 4.071131e-52 | -8.615850e-47 |
| Msa0766080 | Msa1413500 | 0.851568 | 8.154339e-61 | -8.615850e-47 |
| Msa0766080 | Msa1418770 | 0.833594 | 4.875039e-56 | -8.615850e-47 |
| Msa0766080 | Msa1425670 | 0.820521 | 6.564399e-53 | -8.615850e-47 |
| Msa0766080 | Msa1426370 | 0.826546 | 2.556176e-54 | -8.615850e-47 |
| Msa0766080 | Msa1426490 | 0.833229 | 6.012580e-56 | -8.615850e-47 |
| Msa0766080 | Msa1427560 | 0.829380 | 5.316976e-55 | -8.615850e-47 |
| Msa0766080 | Msa1456050 | 0.807670 | 4.513680e-50 | -8.615850e-47 |
| Msa0766080 | Msa1462860 | 0.858120 | 1.024721e-62 | -8.615850e-47 |
| Msa0766080 | Msa1465260 | 0.818347 | 2.055142e-52 | -8.615850e-47 |
| Msa0133540 | Msa0766080 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
| Msa0138890 | Msa0766080 | 0.870728 | 1.171766e-66 | -8.615850e-47 |
| Msa0167480 | Msa0766080 | 0.807369 | 5.228885e-50 | -8.615850e-47 |
| Msa0172270 | Msa0766080 | 0.813382 | 2.632496e-51 | -8.615850e-47 |
| Msa0172930 | Msa0766080 | 0.847310 | 1.254098e-59 | -8.615850e-47 |
| Msa0173530 | Msa0766080 | 0.840028 | 1.112929e-57 | -8.615850e-47 |
| Msa0177960 | Msa0766080 | 0.808704 | 2.717923e-50 | -8.615850e-47 |
| Msa0181490 | Msa0766080 | 0.805915 | 1.059900e-49 | -8.615850e-47 |
| Msa0181610 | Msa0766080 | 0.800031 | 1.744199e-48 | -8.615850e-47 |
| Msa0197980 | Msa0766080 | 0.818960 | 1.492432e-52 | -8.615850e-47 |
| Msa0218720 | Msa0766080 | 0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0218830 | Msa0766080 | 0.864470 | 1.188399e-64 | -8.615850e-47 |
| Msa0219120 | Msa0766080 | 0.835164 | 1.968361e-56 | -8.615850e-47 |
| Msa0221030 | Msa0766080 | 0.835044 | 2.109992e-56 | -8.615850e-47 |
| Msa0230490 | Msa0766080 | 0.850666 | 1.464975e-60 | -8.615850e-47 |
| Msa0230520 | Msa0766080 | 0.880623 | 4.714221e-70 | -8.615850e-47 |
| Msa0231100 | Msa0766080 | 0.808134 | 3.594886e-50 | -8.615850e-47 |
| Msa0371880 | Msa0766080 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa0377820 | Msa0766080 | 0.813511 | 2.466770e-51 | -8.615850e-47 |
| Msa0423750 | Msa0766080 | 0.832320 | 1.011277e-55 | -8.615850e-47 |
| Msa0443390 | Msa0766080 | 0.876515 | 1.313095e-68 | -8.615850e-47 |
| Msa0456430 | Msa0766080 | 0.814956 | 1.183222e-51 | -8.615850e-47 |
| Msa0472930 | Msa0766080 | 0.809991 | 1.439221e-50 | -8.615850e-47 |
| Msa0245580 | Msa0766080 | 0.807321 | 5.352480e-50 | -8.615850e-47 |
| Msa0258850 | Msa0766080 | 0.812058 | 5.132739e-51 | -8.615850e-47 |
| Msa0262480 | Msa0766080 | 0.825316 | 5.010164e-54 | -8.615850e-47 |
| Msa0296250 | Msa0766080 | 0.857529 | 1.534112e-62 | -8.615850e-47 |
| Msa0297830 | Msa0766080 | 0.833531 | 5.054728e-56 | -8.615850e-47 |
| Msa0298200 | Msa0766080 | 0.814564 | 1.444951e-51 | -8.615850e-47 |
| Msa0300350 | Msa0766080 | 0.829153 | 6.035039e-55 | -8.615850e-47 |
| Msa0302610 | Msa0766080 | 0.829362 | 5.369658e-55 | -8.615850e-47 |
| Msa0306690 | Msa0766080 | 0.821915 | 3.131551e-53 | -8.615850e-47 |
| Msa0310080 | Msa0766080 | 0.830726 | 2.496058e-55 | -8.615850e-47 |
| Msa0317910 | Msa0766080 | 0.819260 | 1.275354e-52 | -8.615850e-47 |
| Msa0320590 | Msa0766080 | 0.813010 | 3.178285e-51 | -8.615850e-47 |
| Msa0332640 | Msa0766080 | 0.856106 | 4.026048e-62 | -8.615850e-47 |
| Msa0333910 | Msa0766080 | 0.844285 | 8.313277e-59 | -8.615850e-47 |
| Msa0334030 | Msa0766080 | 0.818619 | 1.783111e-52 | -8.615850e-47 |
| Msa0335840 | Msa0766080 | 0.829151 | 6.043533e-55 | -8.615850e-47 |
| Msa0348830 | Msa0766080 | 0.881192 | 2.944807e-70 | -8.615850e-47 |
| Msa0359040 | Msa0766080 | 0.815869 | 7.412196e-52 | -8.615850e-47 |
| Msa0483110 | Msa0766080 | 0.812823 | 3.491698e-51 | -8.615850e-47 |
| Msa0526540 | Msa0766080 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0527150 | Msa0766080 | 0.834020 | 3.815359e-56 | -8.615850e-47 |
| Msa0531650 | Msa0766080 | 0.810066 | 1.386284e-50 | -8.615850e-47 |
| Msa0534750 | Msa0766080 | 0.848516 | 5.830768e-60 | -8.615850e-47 |
| Msa0546030 | Msa0766080 | 0.809323 | 2.002524e-50 | -8.615850e-47 |
| Msa0584030 | Msa0766080 | 0.809411 | 1.917184e-50 | -8.615850e-47 |
| Msa0584260 | Msa0766080 | 0.801022 | 1.095199e-48 | -8.615850e-47 |
| Msa0588630 | Msa0766080 | -0.811702 | 6.133260e-51 | -8.615850e-47 |
| Msa0593700 | Msa0766080 | 0.823569 | 1.290768e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766080 | MtrunA17_Chr5g0417101 | 98.333 | 120 | 2 | 0 | 1 | 120 | 1 | 120 | 8.39e-82 | 235 |
| Msa0766080 | MtrunA17_Chr7g0217171 | 95.000 | 120 | 6 | 0 | 1 | 120 | 1 | 120 | 3.44e-79 | 228 |
| Msa0766080 | MtrunA17_Chr8g0361721 | 95.000 | 120 | 6 | 0 | 1 | 120 | 1 | 120 | 2.62e-78 | 226 |
| Msa0766080 | MtrunA17_Chr7g0217651 | 75.510 | 49 | 12 | 0 | 1 | 49 | 1 | 49 | 1.66e-21 | 80.5 |
| Msa0766080 | MtrunA17_Chr8g0343321 | 74.510 | 51 | 12 | 1 | 66 | 115 | 66 | 116 | 1.26e-17 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766080 | AT1G26880.1 | 92.500 | 120 | 9 | 0 | 1 | 120 | 1 | 120 | 8.16e-77 | 223 |
| Msa0766080 | AT1G69620.1 | 91.597 | 119 | 10 | 0 | 1 | 119 | 1 | 119 | 2.65e-75 | 219 |
| Msa0766080 | AT3G28900.1 | 88.333 | 120 | 14 | 0 | 1 | 120 | 1 | 120 | 1.69e-73 | 214 |
| Msa0766080 | AT1G26880.2 | 91.304 | 92 | 8 | 0 | 1 | 92 | 1 | 92 | 7.75e-58 | 174 |
Find 56 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGTTAATTGTGTCTTAT+TGG | 0.127608 | 5_2:-27482278 | Msa0766080:three_prime_UTR |
| CCTCACCGCTGAGCTTATTT+AGG | 0.181118 | 5_2:+27484566 | None:intergenic |
| TAGGATCATTAGGGCTTTCT+TGG | 0.253359 | 5_2:-27482468 | Msa0766080:CDS |
| TTTCCTCCAAGGCATAATTT+TGG | 0.254755 | 5_2:-27482388 | Msa0766080:exon |
| CACAAAGGCGCTTAAATTAA+AGG | 0.267541 | 5_2:+27482151 | None:intergenic |
| TGAATTCTCTTGCCAGTAAC+AGG | 0.301708 | 5_2:+27484289 | None:intergenic |
| TCTGGTTCTATAGGATCATT+AGG | 0.302724 | 5_2:-27482478 | Msa0766080:intron |
| AAATCTCTCTCGATCGAAAA+TGG | 0.311288 | 5_2:-27484532 | Msa0766080:exon |
| CTCACCGCTGAGCTTATTTA+GGG | 0.312556 | 5_2:+27484567 | None:intergenic |
| AACCCTGTGTTGGTTGGATT+TGG | 0.331681 | 5_2:+27484470 | None:intergenic |
| TTCACAGTCCTGCGGTTTCT+AGG | 0.351101 | 5_2:+27482631 | None:intergenic |
| GGACCTAAGTGTCCTGTTAC+TGG | 0.354989 | 5_2:-27484301 | Msa0766080:CDS |
| AGAGCAAAAGATTGTGAAAA+AGG | 0.358157 | 5_2:-27482441 | Msa0766080:CDS |
| CTTTAATTTAAGCGCCTTTG+TGG | 0.382203 | 5_2:-27482150 | Msa0766080:three_prime_UTR |
| TATTGACAACCGTTAGATCT+AGG | 0.393756 | 5_2:-27484642 | None:intergenic |
| AGGACTGTGAACCGTGCTTA+TGG | 0.432739 | 5_2:-27482619 | Msa0766080:CDS |
| ATAAGCATACAAACCTTTCC+CGG | 0.437755 | 5_2:+27482572 | None:intergenic |
| AATTCAGAAGGCAAAGGAAA+AGG | 0.455813 | 5_2:-27482411 | Msa0766080:CDS |
| CTTGATCTCTTGTACTCTGC+AGG | 0.465142 | 5_2:+27482658 | None:intergenic |
| TAAGCTCAGCGGTGAGGTAG+AGG | 0.469223 | 5_2:-27484560 | Msa0766080:five_prime_UTR |
| GTTACTGGCAAGAGAATTCA+AGG | 0.469764 | 5_2:-27484286 | Msa0766080:CDS |
| TTTGTCTGGAGGTGCTGTCC+GGG | 0.481029 | 5_2:-27482590 | Msa0766080:CDS |
| CTGGAGGTGCTGTCCGGGAA+AGG | 0.484140 | 5_2:-27482585 | Msa0766080:intron |
| CTGCAGAGTACAAGAGATCA+AGG | 0.494477 | 5_2:-27482657 | Msa0766080:CDS |
| CTGGTTCTATAGGATCATTA+GGG | 0.498453 | 5_2:-27482477 | Msa0766080:intron |
| TGTGGTCCAAAATTATGCCT+TGG | 0.509286 | 5_2:+27482382 | None:intergenic |
| TTTGACAACCCTGTGTTGGT+TGG | 0.514440 | 5_2:+27484464 | None:intergenic |
| GGTCCAAAATTATGCCTTGG+AGG | 0.525568 | 5_2:+27482385 | None:intergenic |
| GCTTAAATTAAAGGTACTAC+TGG | 0.534907 | 5_2:+27482160 | None:intergenic |
| AATTAAAGGTACTACTGGTA+AGG | 0.548654 | 5_2:+27482165 | None:intergenic |
| TTGCCAGTAACAGGACACTT+AGG | 0.549594 | 5_2:+27484298 | None:intergenic |
| CACAGGGTTGTCAAAACCCC+TGG | 0.556629 | 5_2:-27484456 | Msa0766080:intron |
| CAACCAAATCCAACCAACAC+AGG | 0.569419 | 5_2:-27484473 | Msa0766080:CDS |
| ACTACTAAGAAGAGAGCTAG+TGG | 0.569876 | 5_2:-27484322 | Msa0766080:CDS |
| CTGTGAACCGTGCTTATGGT+GGG | 0.576307 | 5_2:-27482615 | Msa0766080:CDS |
| ACTGTGAACCGTGCTTATGG+TGG | 0.577518 | 5_2:-27482616 | Msa0766080:CDS |
| TACTCTGCAGGCCTCAAGTG+TGG | 0.578571 | 5_2:+27482670 | None:intergenic |
| CAATAAGACACAATTAACAT+AGG | 0.581454 | 5_2:+27482279 | None:intergenic |
| AAAGGAAAAGGTTTCCTCCA+AGG | 0.589566 | 5_2:-27482399 | Msa0766080:CDS |
| AAAGGTCCTCAAAATTCAGA+AGG | 0.596465 | 5_2:-27482423 | Msa0766080:CDS |
| GAATGATAACCTAGATCTAA+CGG | 0.599513 | 5_2:+27484633 | None:intergenic |
| AATTGCAGATTCCACACTTG+AGG | 0.607246 | 5_2:-27482681 | Msa0766080:intron |
| CAAGGCTGCCTAGAAACCGC+AGG | 0.608893 | 5_2:-27482639 | Msa0766080:CDS |
| GTAGCTGTGACGACGGCGAT+AGG | 0.621925 | 5_2:+27484497 | None:intergenic |
| CCTCAAAATTCAGAAGGCAA+AGG | 0.629318 | 5_2:-27482417 | Msa0766080:CDS |
| AACCAAATCCAACCAACACA+GGG | 0.630763 | 5_2:-27484472 | Msa0766080:CDS |
| TGTGAACCGTGCTTATGGTG+GGG | 0.634295 | 5_2:-27482614 | Msa0766080:CDS |
| CCTAAATAAGCTCAGCGGTG+AGG | 0.635693 | 5_2:-27484566 | Msa0766080:five_prime_UTR |
| AATTCAAAACTGTATCACAA+TGG | 0.638663 | 5_2:+27482220 | None:intergenic |
| TGGTTGCGTAGCTGTGACGA+CGG | 0.639865 | 5_2:+27484490 | None:intergenic |
| AAACTCAACAATAAGCCGCA+AGG | 0.652032 | 5_2:+27484599 | None:intergenic |
| ACAAAACCCCACCATAAGCA+CGG | 0.670068 | 5_2:+27482608 | None:intergenic |
| TGGTAAGGTACAGTAACACA+AGG | 0.689879 | 5_2:+27482180 | None:intergenic |
| GACTTAGAAAATAACCACAA+AGG | 0.691297 | 5_2:+27482136 | None:intergenic |
| AAGCACGGTTCACAGTCCTG+CGG | 0.716531 | 5_2:+27482623 | None:intergenic |
| AAAACCCTAAATAAGCTCAG+CGG | 0.755747 | 5_2:-27484571 | Msa0766080:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATAATTTTATCATTTTTCT+TGG | + | chr5_2:27482966-27482985 | None:intergenic | 15.0% |
| !! | CAAGAAAAATGATAAAATTA+TGG | - | chr5_2:27482964-27482983 | Msa0766080:intron | 15.0% |
| !!! | AGATATTGTGTATAATTTTA+GGG | + | chr5_2:27483157-27483176 | None:intergenic | 15.0% |
| !!! | TATTATATGTTTCTTACTTT+TGG | - | chr5_2:27483852-27483871 | Msa0766080:intron | 15.0% |
| !! | AAGTATACATAAGAAATTAT+TGG | + | chr5_2:27484557-27484576 | None:intergenic | 15.0% |
| !! | AAATTGAAATTAACTTACCA+GGG | + | chr5_2:27482163-27482182 | None:intergenic | 20.0% |
| !!! | CGTTTATTTTTTTCATTGAT+TGG | - | chr5_2:27482347-27482366 | Msa0766080:three_prime_UTR | 20.0% |
| !! | TAATGTAACATCATAAATCA+AGG | + | chr5_2:27482417-27482436 | None:intergenic | 20.0% |
| !! | CAACATAAAACTATAAACAA+TGG | + | chr5_2:27482485-27482504 | None:intergenic | 20.0% |
| !!! | TAGTTTTATGTTGTGATTTA+TGG | - | chr5_2:27482492-27482511 | Msa0766080:intron | 20.0% |
| !!! | AGTTTGAAATAAACATCATA+CGG | + | chr5_2:27482931-27482950 | None:intergenic | 20.0% |
| !! | CAAAACACGTTAAAATATTT+CGG | - | chr5_2:27483078-27483097 | Msa0766080:intron | 20.0% |
| !!! | CAGATATTGTGTATAATTTT+AGG | + | chr5_2:27483158-27483177 | None:intergenic | 20.0% |
| !! | CTAAAATTATACACAATATC+TGG | - | chr5_2:27483156-27483175 | Msa0766080:intron | 20.0% |
| !!! | AATATTGATTAAAAATGCCA+AGG | + | chr5_2:27483365-27483384 | None:intergenic | 20.0% |
| !! | TGGTCATATATTAAAAAACA+TGG | + | chr5_2:27483389-27483408 | None:intergenic | 20.0% |
| !! | AATCAAGTAAAATTGTTAAC+TGG | + | chr5_2:27483409-27483428 | None:intergenic | 20.0% |
| !! | TAGAATTTCAAAAACTAAAC+TGG | + | chr5_2:27483516-27483535 | None:intergenic | 20.0% |
| !! | TGTTCATATAATAAGAAACA+TGG | + | chr5_2:27483619-27483638 | None:intergenic | 20.0% |
| !!! | AGCTTTTACATTTAATGATT+TGG | - | chr5_2:27484065-27484084 | Msa0766080:intron | 20.0% |
| !! | AATCTAATTATATTTGTCTC+TGG | - | chr5_2:27484103-27484122 | Msa0766080:intron | 20.0% |
| !!! | AAATGAGATAACAATCTTTT+TGG | - | chr5_2:27484240-27484259 | Msa0766080:intron | 20.0% |
| !!! | TTTTGAATTTTCTGGTTTAT+TGG | - | chr5_2:27484393-27484412 | Msa0766080:intron | 20.0% |
| ! | AATTGAAATTAACTTACCAG+GGG | + | chr5_2:27482162-27482181 | None:intergenic | 25.0% |
| ! | GAAATTGAAATTAACTTACC+AGG | + | chr5_2:27482164-27482183 | None:intergenic | 25.0% |
| !!! | ATTTTGTGTTGTTGAAATGT+AGG | - | chr5_2:27482235-27482254 | Msa0766080:three_prime_UTR | 25.0% |
| !!! | ACCTTTAAAACTTGTAAATG+TGG | - | chr5_2:27482615-27482634 | Msa0766080:CDS | 25.0% |
| !!! | ACCACATTTACAAGTTTTAA+AGG | + | chr5_2:27482619-27482638 | None:intergenic | 25.0% |
| !!! | AATATTTTAACGTGTTTTGG+AGG | + | chr5_2:27483077-27483096 | None:intergenic | 25.0% |
| !!! | CGAAATATTTTAACGTGTTT+TGG | + | chr5_2:27483080-27483099 | None:intergenic | 25.0% |
| !! | CTTAATTTTGTTCCAAGTTA+AGG | + | chr5_2:27483565-27483584 | None:intergenic | 25.0% |
| !! | TTGCTTTGTTATAGAATGTT+TGG | - | chr5_2:27483675-27483694 | Msa0766080:intron | 25.0% |
| !!! | TAATGATTTGGTTTAATTGC+TGG | - | chr5_2:27484077-27484096 | Msa0766080:intron | 25.0% |
| !! | AAGATTGTTATCTCATTTTG+TGG | + | chr5_2:27484238-27484257 | None:intergenic | 25.0% |
| ! | CAATAAGACACAATTAACAT+AGG | + | chr5_2:27484323-27484342 | None:intergenic | 25.0% |
| ! | CTATGTTAATTGTGTCTTAT+TGG | - | chr5_2:27484321-27484340 | Msa0766080:CDS | 25.0% |
| ! | AATTCAAAACTGTATCACAA+TGG | + | chr5_2:27484382-27484401 | None:intergenic | 25.0% |
| !!! | TGATACAGTTTTGAATTTTC+TGG | - | chr5_2:27484385-27484404 | Msa0766080:intron | 25.0% |
| !!! | TGGTTATTTTCTAAGTCTAA+CGG | - | chr5_2:27484469-27484488 | Msa0766080:CDS | 25.0% |
| !!! | ATTGTTTTGTAGTTTTTTGC+TGG | - | chr5_2:27484606-27484625 | Msa0766080:five_prime_UTR | 25.0% |
| GAATGATAACCTAGATCTAA+CGG | + | chr5_2:27481969-27481988 | None:intergenic | 30.0% | |
| ! | ATTCTCTTTTATACTCCTTG+CGG | - | chr5_2:27481985-27482004 | Msa0766080:three_prime_UTR | 30.0% |
| ATGTTGTGATTTATGGTAAC+TGG | - | chr5_2:27482499-27482518 | Msa0766080:intron | 30.0% | |
| GATACAGTTCATGACAATTT+AGG | - | chr5_2:27482689-27482708 | Msa0766080:intron | 30.0% | |
| !!! | GTTGTTTTTGTAAGCTATCT+TGG | + | chr5_2:27482766-27482785 | None:intergenic | 30.0% |
| TTTATAATCCGAACTGCATA+GGG | + | chr5_2:27483025-27483044 | None:intergenic | 30.0% | |
| ! | TTTTATAATCCGAACTGCAT+AGG | + | chr5_2:27483026-27483045 | None:intergenic | 30.0% |
| TTCGGATTATAAAATCCGAA+CGG | - | chr5_2:27483032-27483051 | Msa0766080:intron | 30.0% | |
| TGAGCAATTGATATTTACCA+AGG | + | chr5_2:27483195-27483214 | None:intergenic | 30.0% | |
| TGGTAAATATCAATTGCTCA+TGG | - | chr5_2:27483195-27483214 | Msa0766080:intron | 30.0% | |
| TGATTAAAAATGCCAAGGTT+GGG | + | chr5_2:27483360-27483379 | None:intergenic | 30.0% | |
| TTGATTAAAAATGCCAAGGT+TGG | + | chr5_2:27483361-27483380 | None:intergenic | 30.0% | |
| ! | ATAGTAAAAAAGCATGTCAG+AGG | + | chr5_2:27483826-27483845 | None:intergenic | 30.0% |
| TTGCAAGCTCAAATAATCAT+AGG | + | chr5_2:27483882-27483901 | None:intergenic | 30.0% | |
| AGGTTTGTATGCTTATCTTA+CGG | - | chr5_2:27484034-27484053 | Msa0766080:intron | 30.0% | |
| !! | ATATTTGTCTCTGGTTCTAT+AGG | - | chr5_2:27484112-27484131 | Msa0766080:intron | 30.0% |
| AGAGCAAAAGATTGTGAAAA+AGG | - | chr5_2:27484158-27484177 | Msa0766080:intron | 30.0% | |
| !! | AATCTTTTTGGAAGACTCTT+AGG | - | chr5_2:27484252-27484271 | Msa0766080:intron | 30.0% |
| !! | AATTAAAGGTACTACTGGTA+AGG | + | chr5_2:27484437-27484456 | None:intergenic | 30.0% |
| !! | GCTTAAATTAAAGGTACTAC+TGG | + | chr5_2:27484442-27484461 | None:intergenic | 30.0% |
| GACTTAGAAAATAACCACAA+AGG | + | chr5_2:27484466-27484485 | None:intergenic | 30.0% | |
| AAAACCCTAAATAAGCTCAG+CGG | - | chr5_2:27482028-27482047 | Msa0766080:intron | 35.0% | |
| AAATCTCTCTCGATCGAAAA+TGG | - | chr5_2:27482067-27482086 | Msa0766080:intron | 35.0% | |
| ! | TTGTGTTGTTGAAATGTAGG+TGG | - | chr5_2:27482238-27482257 | Msa0766080:three_prime_UTR | 35.0% |
| ! | TTTTGTAAGCTATCTTGGAG+AGG | + | chr5_2:27482761-27482780 | None:intergenic | 35.0% |
| AAACATCATACGGACAATCT+AGG | + | chr5_2:27482921-27482940 | None:intergenic | 35.0% | |
| !!! | GTGTTTTGGAGGATTTTACA+GGG | + | chr5_2:27483066-27483085 | None:intergenic | 35.0% |
| ! | TCGGATTTTACAAACTGAAC+AGG | - | chr5_2:27483097-27483116 | Msa0766080:intron | 35.0% |
| ! | CGGATTTTACAAACTGAACA+GGG | - | chr5_2:27483098-27483117 | Msa0766080:intron | 35.0% |
| ATATCAATTGCTCATGGCAT+TGG | - | chr5_2:27483201-27483220 | Msa0766080:intron | 35.0% | |
| TATACCTTGAAGCCTTAACT+TGG | - | chr5_2:27483550-27483569 | Msa0766080:intron | 35.0% | |
| ATAAGCATACAAACCTTTCC+CGG | + | chr5_2:27484030-27484049 | None:intergenic | 35.0% | |
| GGTTTGTATGCTTATCTTAC+GGG | - | chr5_2:27484035-27484054 | Msa0766080:intron | 35.0% | |
| !! | TCTGGTTCTATAGGATCATT+AGG | - | chr5_2:27484121-27484140 | Msa0766080:intron | 35.0% |
| !! | CTGGTTCTATAGGATCATTA+GGG | - | chr5_2:27484122-27484141 | Msa0766080:intron | 35.0% |
| AAAGGTCCTCAAAATTCAGA+AGG | - | chr5_2:27484176-27484195 | Msa0766080:intron | 35.0% | |
| AATTCAGAAGGCAAAGGAAA+AGG | - | chr5_2:27484188-27484207 | Msa0766080:intron | 35.0% | |
| ! | TTTCCTCCAAGGCATAATTT+TGG | - | chr5_2:27484211-27484230 | Msa0766080:intron | 35.0% |
| !! | CACAAAGGCGCTTAAATTAA+AGG | + | chr5_2:27484451-27484470 | None:intergenic | 35.0% |
| ! | CTTTAATTTAAGCGCCTTTG+TGG | - | chr5_2:27484449-27484468 | Msa0766080:intron | 35.0% |
| AAACTCAACAATAAGCCGCA+AGG | + | chr5_2:27482003-27482022 | None:intergenic | 40.0% | |
| AACCAAATCCAACCAACACA+GGG | - | chr5_2:27482127-27482146 | Msa0766080:three_prime_UTR | 40.0% | |
| ACTACTAAGAAGAGAGCTAG+TGG | - | chr5_2:27482277-27482296 | Msa0766080:three_prime_UTR | 40.0% | |
| TGAATTCTCTTGCCAGTAAC+AGG | + | chr5_2:27482313-27482332 | None:intergenic | 40.0% | |
| GTTACTGGCAAGAGAATTCA+AGG | - | chr5_2:27482313-27482332 | Msa0766080:three_prime_UTR | 40.0% | |
| ! | AATGTGTGTCACTGCTATCT+TGG | - | chr5_2:27482436-27482455 | Msa0766080:CDS | 40.0% |
| AAACATTCACAGGCTCTGTT+TGG | + | chr5_2:27482890-27482909 | None:intergenic | 40.0% | |
| AAACAGAGCCTGTGAATGTT+TGG | - | chr5_2:27482889-27482908 | Msa0766080:intron | 40.0% | |
| ACTAATAGGGTGGGAAAAGA+AGG | + | chr5_2:27482992-27483011 | None:intergenic | 40.0% | |
| !!! | CGTGTTTTGGAGGATTTTAC+AGG | + | chr5_2:27483067-27483086 | None:intergenic | 40.0% |
| CCTAGTTAACTGTACAGGAT+AGG | + | chr5_2:27483330-27483349 | None:intergenic | 40.0% | |
| CCTATCCTGTACAGTTAACT+AGG | - | chr5_2:27483327-27483346 | Msa0766080:intron | 40.0% | |
| CTTGACCTAGTTAACTGTAC+AGG | + | chr5_2:27483335-27483354 | None:intergenic | 40.0% | |
| CTTGTTCTCTTCCATTGTCT+TGG | - | chr5_2:27483430-27483449 | Msa0766080:intron | 40.0% | |
| TCTCTTCCATTGTCTTGGAA+TGG | - | chr5_2:27483435-27483454 | Msa0766080:intron | 40.0% | |
| TTCCATTGTCTTGGAATGGT+TGG | - | chr5_2:27483439-27483458 | Msa0766080:intron | 40.0% | |
| GGTGTATGGTTATTTGAGCT+TGG | - | chr5_2:27483460-27483479 | Msa0766080:intron | 40.0% | |
| TGTTCCAAGTTAAGGCTTCA+AGG | + | chr5_2:27483557-27483576 | None:intergenic | 40.0% | |
| ATCCGTGAACAATCATATGC+TGG | - | chr5_2:27483728-27483747 | Msa0766080:intron | 40.0% | |
| AGCCAGCATATGATTGTTCA+CGG | + | chr5_2:27483733-27483752 | None:intergenic | 40.0% | |
| AATTGCAGATTCCACACTTG+AGG | - | chr5_2:27483918-27483937 | Msa0766080:intron | 40.0% | |
| TAGGATCATTAGGGCTTTCT+TGG | - | chr5_2:27484131-27484150 | Msa0766080:intron | 40.0% | |
| ! | CCTTTGCCTTCTGAATTTTG+AGG | + | chr5_2:27484185-27484204 | None:intergenic | 40.0% |
| CCTCAAAATTCAGAAGGCAA+AGG | - | chr5_2:27484182-27484201 | Msa0766080:intron | 40.0% | |
| AAAGGAAAAGGTTTCCTCCA+AGG | - | chr5_2:27484200-27484219 | Msa0766080:intron | 40.0% | |
| TGTGGTCCAAAATTATGCCT+TGG | + | chr5_2:27484220-27484239 | None:intergenic | 40.0% | |
| TGGTAAGGTACAGTAACACA+AGG | + | chr5_2:27484422-27484441 | None:intergenic | 40.0% | |
| ACAACATACAACATGTGCCT+TGG | - | chr5_2:27484520-27484539 | Msa0766080:exon | 40.0% | |
| !! | TATTGGCTCAACATTCACCA+AGG | + | chr5_2:27484540-27484559 | None:intergenic | 40.0% |
| CTCACCGCTGAGCTTATTTA+GGG | + | chr5_2:27482035-27482054 | None:intergenic | 45.0% | |
| CAACCAAATCCAACCAACAC+AGG | - | chr5_2:27482126-27482145 | Msa0766080:three_prime_UTR | 45.0% | |
| !! | AACCCTGTGTTGGTTGGATT+TGG | + | chr5_2:27482132-27482151 | None:intergenic | 45.0% |
| ! | TTTGACAACCCTGTGTTGGT+TGG | + | chr5_2:27482138-27482157 | None:intergenic | 45.0% |
| TTGCCAGTAACAGGACACTT+AGG | + | chr5_2:27482304-27482323 | None:intergenic | 45.0% | |
| GGTGTGAACCAAACATTCAC+AGG | + | chr5_2:27482900-27482919 | None:intergenic | 45.0% | |
| ACGCGAGAAACTAATAGGGT+GGG | + | chr5_2:27483001-27483020 | None:intergenic | 45.0% | |
| ! | TACAGGGTGTTAATGCCGTT+CGG | + | chr5_2:27483050-27483069 | None:intergenic | 45.0% |
| TTTACAAACTGAACAGGGCG+CGG | - | chr5_2:27483103-27483122 | Msa0766080:intron | 45.0% | |
| !! | CTGGCTTTGAATGCAAACCT+TGG | - | chr5_2:27483175-27483194 | Msa0766080:intron | 45.0% |
| ! | CTCATGGCATTGGAATACTG+AGG | - | chr5_2:27483211-27483230 | Msa0766080:intron | 45.0% |
| CACCAACCATTCCAAGACAA+TGG | + | chr5_2:27483444-27483463 | None:intergenic | 45.0% | |
| ! | GTCTTGGAATGGTTGGTGTA+TGG | - | chr5_2:27483446-27483465 | Msa0766080:intron | 45.0% |
| !! | CAATCATATGCTGGCTCTGT+TGG | - | chr5_2:27483737-27483756 | Msa0766080:intron | 45.0% |
| CTTGATCTCTTGTACTCTGC+AGG | + | chr5_2:27483944-27483963 | None:intergenic | 45.0% | |
| CTGCAGAGTACAAGAGATCA+AGG | - | chr5_2:27483942-27483961 | Msa0766080:intron | 45.0% | |
| ACAAAACCCCACCATAAGCA+CGG | + | chr5_2:27483994-27484013 | None:intergenic | 45.0% | |
| GGTCCAAAATTATGCCTTGG+AGG | + | chr5_2:27484217-27484236 | None:intergenic | 45.0% | |
| !! | TAATATTAATTAAAAATAGT+AGG | + | chr5_2:27483596-27483615 | None:intergenic | 5.0% |
| CCTCACCGCTGAGCTTATTT+AGG | + | chr5_2:27482036-27482055 | None:intergenic | 50.0% | |
| CCTAAATAAGCTCAGCGGTG+AGG | - | chr5_2:27482033-27482052 | Msa0766080:intron | 50.0% | |
| !! | GGGTTTTGACAACCCTGTGT+TGG | + | chr5_2:27482142-27482161 | None:intergenic | 50.0% |
| GGACCTAAGTGTCCTGTTAC+TGG | - | chr5_2:27482298-27482317 | Msa0766080:three_prime_UTR | 50.0% | |
| CACGCGAGAAACTAATAGGG+TGG | + | chr5_2:27483002-27483021 | None:intergenic | 50.0% | |
| GGGCACGCGAGAAACTAATA+GGG | + | chr5_2:27483005-27483024 | None:intergenic | 50.0% | |
| AGGGCACGCGAGAAACTAAT+AGG | + | chr5_2:27483006-27483025 | None:intergenic | 50.0% | |
| CTAGGTCAAGATCCCAACCT+TGG | - | chr5_2:27483345-27483364 | Msa0766080:intron | 50.0% | |
| TTCACAGTCCTGCGGTTTCT+AGG | + | chr5_2:27483971-27483990 | None:intergenic | 50.0% | |
| AGGACTGTGAACCGTGCTTA+TGG | - | chr5_2:27483980-27483999 | Msa0766080:intron | 50.0% | |
| ACTGTGAACCGTGCTTATGG+TGG | - | chr5_2:27483983-27484002 | Msa0766080:intron | 50.0% | |
| CTGTGAACCGTGCTTATGGT+GGG | - | chr5_2:27483984-27484003 | Msa0766080:intron | 50.0% | |
| TGTGAACCGTGCTTATGGTG+GGG | - | chr5_2:27483985-27484004 | Msa0766080:intron | 50.0% | |
| !! | GCTTATGGTGGGGTTTTGTC+TGG | - | chr5_2:27483995-27484014 | Msa0766080:intron | 50.0% |
| !! | TATGGTGGGGTTTTGTCTGG+AGG | - | chr5_2:27483998-27484017 | Msa0766080:intron | 50.0% |
| !!! | TTTTGTCTGGAGGTGCTGTC+CGG | - | chr5_2:27484008-27484027 | Msa0766080:intron | 50.0% |
| TAAGCTCAGCGGTGAGGTAG+AGG | - | chr5_2:27482039-27482058 | Msa0766080:intron | 55.0% | |
| TGGTTGCGTAGCTGTGACGA+CGG | + | chr5_2:27482112-27482131 | None:intergenic | 55.0% | |
| CACAGGGTTGTCAAAACCCC+TGG | - | chr5_2:27482143-27482162 | Msa0766080:three_prime_UTR | 55.0% | |
| AGGGCGCGGAGAAACTCATT+GGG | - | chr5_2:27483117-27483136 | Msa0766080:intron | 55.0% | |
| CGCGGAGAAACTCATTGGGT+GGG | - | chr5_2:27483121-27483140 | Msa0766080:intron | 55.0% | |
| GCGGAGAAACTCATTGGGTG+GGG | - | chr5_2:27483122-27483141 | Msa0766080:intron | 55.0% | |
| TACTCTGCAGGCCTCAAGTG+TGG | + | chr5_2:27483932-27483951 | None:intergenic | 55.0% | |
| AAGCACGGTTCACAGTCCTG+CGG | + | chr5_2:27483979-27483998 | None:intergenic | 55.0% | |
| !! | TTTGTCTGGAGGTGCTGTCC+GGG | - | chr5_2:27484009-27484028 | Msa0766080:intron | 55.0% |
| GTAGCTGTGACGACGGCGAT+AGG | + | chr5_2:27482105-27482124 | None:intergenic | 60.0% | |
| CTCGCGTGCCCTATGCAGTT+CGG | - | chr5_2:27483014-27483033 | Msa0766080:intron | 60.0% | |
| CAGGGCGCGGAGAAACTCAT+TGG | - | chr5_2:27483116-27483135 | Msa0766080:intron | 60.0% | |
| GCGCGGAGAAACTCATTGGG+TGG | - | chr5_2:27483120-27483139 | Msa0766080:intron | 60.0% | |
| CAAGGCTGCCTAGAAACCGC+AGG | - | chr5_2:27483960-27483979 | Msa0766080:intron | 60.0% | |
| !! | CTGGAGGTGCTGTCCGGGAA+AGG | - | chr5_2:27484014-27484033 | Msa0766080:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 27481961 | 27484660 | 27481961 | ID=Msa0766080;Name=Msa0766080 |
| chr5_2 | mRNA | 27481961 | 27484660 | 27481961 | ID=Msa0766080-mRNA-1;Parent=Msa0766080;Name=Msa0766080-mRNA-1;_AED=0.06;_eAED=0.06;_QI=125|1|1|1|0.75|0.6|5|368|120 |
| chr5_2 | exon | 27481961 | 27482024 | 27481961 | ID=Msa0766080-mRNA-1:exon:10749;Parent=Msa0766080-mRNA-1 |
| chr5_2 | exon | 27482090 | 27482487 | 27482090 | ID=Msa0766080-mRNA-1:exon:10748;Parent=Msa0766080-mRNA-1 |
| chr5_2 | exon | 27482586 | 27482695 | 27482586 | ID=Msa0766080-mRNA-1:exon:10747;Parent=Msa0766080-mRNA-1 |
| chr5_2 | exon | 27484285 | 27484364 | 27484285 | ID=Msa0766080-mRNA-1:exon:10746;Parent=Msa0766080-mRNA-1 |
| chr5_2 | exon | 27484457 | 27484660 | 27484457 | ID=Msa0766080-mRNA-1:exon:10745;Parent=Msa0766080-mRNA-1 |
| chr5_2 | five_prime_UTR | 27484536 | 27484660 | 27484536 | ID=Msa0766080-mRNA-1:five_prime_utr;Parent=Msa0766080-mRNA-1 |
| chr5_2 | CDS | 27484457 | 27484535 | 27484457 | ID=Msa0766080-mRNA-1:cds;Parent=Msa0766080-mRNA-1 |
| chr5_2 | CDS | 27484285 | 27484364 | 27484285 | ID=Msa0766080-mRNA-1:cds;Parent=Msa0766080-mRNA-1 |
| chr5_2 | CDS | 27482586 | 27482695 | 27482586 | ID=Msa0766080-mRNA-1:cds;Parent=Msa0766080-mRNA-1 |
| chr5_2 | CDS | 27482394 | 27482487 | 27482394 | ID=Msa0766080-mRNA-1:cds;Parent=Msa0766080-mRNA-1 |
| chr5_2 | three_prime_UTR | 27482090 | 27482393 | 27482090 | ID=Msa0766080-mRNA-1:three_prime_utr;Parent=Msa0766080-mRNA-1 |
| chr5_2 | three_prime_UTR | 27481961 | 27482024 | 27481961 | ID=Msa0766080-mRNA-1:three_prime_utr;Parent=Msa0766080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
