AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0308290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308290 MtrunA17_Chr2g0281881 98.015 655 13 0 1 655 1 655 0.0 1328
Msa0308290 MtrunA17_Chr3g0132201 80.892 628 114 3 31 655 27 651 0.0 1067
Msa0308290 MtrunA17_Chr2g0290681 73.520 608 156 2 27 633 10 613 0.0 946
Msa0308290 MtrunA17_Chr6g0449041 24.644 491 330 11 84 550 6 480 5.96e-35 140
Msa0308290 MtrunA17_Chr5g0420011 22.325 542 377 17 52 574 19 535 1.69e-15 80.1
Msa0308290 MtrunA17_Chr4g0007071 22.202 545 374 17 52 574 19 535 1.88e-15 80.1
Msa0308290 MtrunA17_Chr2g0283471 21.942 515 340 17 88 572 26 508 4.87e-14 75.5
Msa0308290 MtrunA17_Chr7g0242961 22.656 512 344 16 88 574 47 531 3.92e-13 72.4
Msa0308290 MtrunA17_Chr7g0242981 23.034 534 345 18 63 574 28 517 4.81e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0308290 AT3G48560.1 83.788 586 95 0 70 655 85 670 0.0 1046
Msa0308290 AT5G17380.1 27.328 494 309 12 84 550 14 484 8.58e-47 174
Msa0308290 AT5G01330.1 24.237 524 321 17 88 574 36 520 8.05e-20 94.4
Msa0308290 AT5G01320.1 22.562 523 331 15 88 574 47 531 1.23e-17 87.4
Msa0308290 AT4G33070.1 22.328 524 331 15 88 574 51 535 1.95e-16 83.6
Msa0308290 AT5G54960.1 21.782 505 353 14 88 572 51 533 1.29e-15 80.9

Find 215 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGGGATCAATCGAATTT+TGG 0.232600 2_4:+2480814 Msa0308290:CDS
CCCAATATGTTGAAGTTTGC+AGG 0.240705 2_4:+2481352 Msa0308290:CDS
GATCAACCTATTAGGTTAAC+TGG 0.252439 2_4:+2480359 Msa0308290:CDS
AATATTTCTTTCTCATTGGC+TGG 0.252481 2_4:-2481328 None:intergenic
TTGAGCTTGAAGGGAGTGTT+TGG 0.263351 2_4:-2479717 None:intergenic
TTCAACAACAATATCTTAAC+AGG 0.266547 2_4:-2481226 None:intergenic
GTGTTTGGGGAAGTGGAAAA+TGG 0.269439 2_4:-2479702 None:intergenic
CGCTATGGGATTTGGATTGC+CGG 0.275397 2_4:+2481090 Msa0308290:CDS
ACCTGCAAACTTCAACATAT+TGG 0.275568 2_4:-2481353 None:intergenic
CGAATTGGGATCAACCTATT+AGG 0.276452 2_4:+2480351 Msa0308290:CDS
ACAGATTGTGAGGTTGTTAT+TGG 0.278604 2_4:+2480427 Msa0308290:CDS
GGTCTTGGCGCTATGGGATT+TGG 0.283365 2_4:+2481082 Msa0308290:CDS
AGGTTTGATGATCGGGTTAC+TGG 0.289362 2_4:+2480674 Msa0308290:CDS
CCTGCAAACTTCAACATATT+GGG 0.314608 2_4:-2481352 None:intergenic
CAGGTAGGTGTGAGCTCTAT+TGG 0.318135 2_4:-2481299 None:intergenic
TGCTAGTACTTTGATGGGGT+TGG 0.322703 2_4:+2480541 Msa0308290:CDS
AACAGGTTTCTGTTCCGAAT+TGG 0.337313 2_4:+2480336 Msa0308290:CDS
TGTTCCAAATGTGCCTCTTT+CGG 0.341709 2_4:-2480407 None:intergenic
ATATACCCAGTTAACCTAAT+AGG 0.345011 2_4:-2480365 None:intergenic
ATTTGGATTGCCGGCTGCCA+TGG 0.358680 2_4:+2481099 Msa0308290:CDS
GGGGAATATTTCTTTCTCAT+TGG 0.363131 2_4:-2481332 None:intergenic
GGCACCGAAAGAGGCACATT+TGG 0.369187 2_4:+2480403 Msa0308290:CDS
GATCCATTTGCAGGAATCAT+TGG 0.370032 2_4:-2481502 None:intergenic
TGAGCTTGAAGGGAGTGTTT+GGG 0.371196 2_4:-2479716 None:intergenic
TGATTCTGAAAACGTGGTTT+TGG 0.372112 2_4:-2479674 None:intergenic
GGATTTGAAGTTGGCTTTGA+AGG 0.374802 2_4:+2480796 Msa0308290:CDS
ACCTGTTGCTAGTACTTTGA+TGG 0.375227 2_4:+2480535 Msa0308290:CDS
GAAGGGAGTGTTTGGGGAAG+TGG 0.375779 2_4:-2479709 None:intergenic
CAGCCTCATGTGTCGGTTTG+TGG 0.375821 2_4:+2480773 Msa0308290:CDS
AAGCTTTATGATGAATGTTC+AGG 0.379274 2_4:+2481174 Msa0308290:CDS
ACAGGTTTCTGTTCCGAATT+GGG 0.386257 2_4:+2480337 Msa0308290:CDS
TCCTCAAAGGATCCATTTGC+AGG 0.389166 2_4:-2481511 None:intergenic
ATGTGCCTCTTTCGGTGCCT+TGG 0.389362 2_4:-2480399 None:intergenic
ACCTAAGGATATTCAGCAAC+AGG 0.392227 2_4:+2480319 Msa0308290:CDS
GGTTAACTGGGTATATGAAT+AGG 0.392870 2_4:+2480372 Msa0308290:CDS
TTCTGCTGGTCTTGGCGCTA+TGG 0.393331 2_4:+2481075 Msa0308290:CDS
ACAGCAGCTCCCATGGCAGC+CGG 0.395329 2_4:-2481109 None:intergenic
GATATTGATGCTGCTGAGAT+TGG 0.396931 2_4:+2480740 Msa0308290:CDS
TGGGGTTAGGTTTGATGATC+GGG 0.402613 2_4:+2480667 Msa0308290:CDS
GGTGTCTGCATCGCCACTTC+CGG 0.403895 2_4:+2480041 Msa0308290:CDS
CGTCGAAGCACTCGAACGTC+AGG 0.404386 2_4:+2479866 Msa0308290:CDS
GGGTTCGTTAGGGGCAAATC+GGG 0.405793 2_4:-2479823 None:intergenic
GCTAGTACTTTGATGGGGTT+GGG 0.408704 2_4:+2480542 Msa0308290:CDS
TGGTTGACTTCTGCTGGTCT+TGG 0.411154 2_4:+2481067 Msa0308290:CDS
ATAGAGAGTAAGCTTGATTT+CGG 0.412100 2_4:+2480848 Msa0308290:CDS
GAGAATTCGTTGCAGATGCT+TGG 0.413491 2_4:+2480584 Msa0308290:CDS
AACTGAATGATCAGAAAGTT+AGG 0.416856 2_4:+2480885 Msa0308290:CDS
AGCCTCATGTGTCGGTTTGT+GGG 0.418936 2_4:+2480774 Msa0308290:CDS
TTGGGGTTAGGTTTGATGAT+CGG 0.419793 2_4:+2480666 Msa0308290:CDS
TGTGCCTCTTTCGGTGCCTT+GGG 0.420636 2_4:-2480398 None:intergenic
AGGCGGTTTGTTGAGTTAAC+CGG 0.420654 2_4:+2480509 Msa0308290:CDS
GGGGTTCGTTAGGGGCAAAT+CGG 0.423916 2_4:-2479824 None:intergenic
TCCTCCGCAGTATGCTATAC+AGG 0.426227 2_4:+2480943 Msa0308290:CDS
TGCATCGCCACTTCCGGCCC+AGG 0.426512 2_4:+2480047 Msa0308290:CDS
ATTTCCATTGAAGCGCCGCC+AGG 0.431656 2_4:-2479912 None:intergenic
CCATCACCGGTCAGGTTCCC+CGG 0.439113 2_4:+2480129 Msa0308290:CDS
TCTTATTGCCATCACCGGTC+AGG 0.440205 2_4:+2480121 Msa0308290:CDS
TCTGCTGGTCTTGGCGCTAT+GGG 0.442287 2_4:+2481076 Msa0308290:CDS
GCTCGTTCCTCCGGTCTCCC+TGG 0.442490 2_4:+2480020 Msa0308290:CDS
CAATAGAGCTCACACCTACC+TGG 0.446335 2_4:+2481300 Msa0308290:CDS
TTTGGATTGCCGGCTGCCAT+GGG 0.447144 2_4:+2481100 Msa0308290:CDS
GATTTGAAGTTGGCTTTGAA+GGG 0.448952 2_4:+2480797 Msa0308290:CDS
TCTCATTGGCTGGGTCTCCC+AGG 0.453592 2_4:-2481318 None:intergenic
CCTGTTGCTAGTACTTTGAT+GGG 0.454512 2_4:+2480536 Msa0308290:CDS
GTTGGGTTCCTATCCTAGTT+CGG 0.456275 2_4:+2480559 Msa0308290:CDS
TGTTTGGGGAAGTGGAAAAT+GGG 0.456756 2_4:-2479701 None:intergenic
TGCAGGTGCTTGTGGTATAC+CGG 0.457670 2_4:+2481369 Msa0308290:CDS
CATCAAGAAGGTAGGGGCCA+GGG 0.457929 2_4:-2481450 None:intergenic
ACATCAAGAAGGTAGGGGCC+AGG 0.461753 2_4:-2481451 None:intergenic
CATCAGTACCAATCATTCTC+CGG 0.464538 2_4:-2480148 None:intergenic
TATGATGAATGTTCAGGAGT+TGG 0.465434 2_4:+2481180 Msa0308290:CDS
CAGGTTCCCCGGAGAATGAT+TGG 0.466447 2_4:+2480140 Msa0308290:CDS
ATCAGTACCAATCATTCTCC+GGG 0.467400 2_4:-2480147 None:intergenic
CCGGGGAACCTGACCGGTGA+TGG 0.468521 2_4:-2480129 None:intergenic
TTAGGTATATCGATCAAAAC+AGG 0.472536 2_4:-2480302 None:intergenic
AGTAGGGTTGGAGATGGAAG+CGG 0.473325 2_4:-2479760 None:intergenic
TTGCAGATGCTTGGGATGCA+TGG 0.475365 2_4:+2480593 Msa0308290:CDS
CCCATCAAAGTACTAGCAAC+AGG 0.475566 2_4:-2480536 None:intergenic
TTACCCTGGCGGCGCTTCAA+TGG 0.476078 2_4:+2479908 Msa0308290:CDS
AACCACAATAGCGTCGGGAT+TGG 0.482109 2_4:-2481134 None:intergenic
GTAAGCTTGATTTCGGAGGT+TGG 0.484920 2_4:+2480855 Msa0308290:CDS
AGGCAGTGGTTGACTTCTGC+TGG 0.485926 2_4:+2481061 Msa0308290:CDS
CTAATAGGTTGATCCCAATT+CGG 0.489964 2_4:-2480350 None:intergenic
TTCTTGACGAGCTTACCAAT+GGG 0.490237 2_4:+2480966 Msa0308290:CDS
TTGCCAATGATTCCTGCAAA+TGG 0.490698 2_4:+2481499 Msa0308290:CDS
GATGCAGACACCAGGGAGAC+CGG 0.491267 2_4:-2480030 None:intergenic
ATATTTCTTTCTCATTGGCT+GGG 0.491931 2_4:-2481327 None:intergenic
GAGGGTTACGCTCGTTCCTC+CGG 0.496778 2_4:+2480011 Msa0308290:CDS
CTCTTTGTCACACGAGCTGC+CGG 0.502154 2_4:-2481388 None:intergenic
CCACCACCAACATACAAAAC+AGG 0.502296 2_4:-2480461 None:intergenic
AGTAGCACCTGGGCCGGAAG+TGG 0.502445 2_4:-2480054 None:intergenic
TCCTGCAAATGGATCCTTTG+AGG 0.504950 2_4:+2481510 Msa0308290:CDS
AGAATTCGTTGCAGATGCTT+GGG 0.506752 2_4:+2480585 Msa0308290:CDS
GAAGTGGCGATGCAGACACC+AGG 0.511122 2_4:-2480038 None:intergenic
AGAGCGGTGGTTGAGCTTGA+AGG 0.511308 2_4:-2479727 None:intergenic
GGTTTGTGGGGATTTGAAGT+TGG 0.511799 2_4:+2480787 Msa0308290:CDS
ACCTGTTGCTGAATATCCTT+AGG 0.511983 2_4:-2480320 None:intergenic
TGACCGGTGATGGCAATAAG+AGG 0.515800 2_4:-2480119 None:intergenic
GCCCCTAACGAACCCCGAAA+AGG 0.516458 2_4:+2479831 Msa0308290:CDS
GATCTAGTTACCTCAACAAT+CGG 0.519783 2_4:-2480185 None:intergenic
TGAATTGTAGCGAGGAATTG+AGG 0.520671 2_4:+2480489 Msa0308290:CDS
TCAAACTTCTTATAACTCAT+CGG 0.521295 2_4:-2480911 None:intergenic
ATATTGATGCTGCTGAGATT+GGG 0.522267 2_4:+2480741 Msa0308290:CDS
ATTGGCAACAGCAGCTCCCA+TGG 0.524757 2_4:-2481116 None:intergenic
TCAGGAGTTGGCTACTATCA+AGG 0.529463 2_4:+2481192 Msa0308290:CDS
CATTCTCCGGGGAACCTGAC+CGG 0.531322 2_4:-2480135 None:intergenic
GTTCTTGACGAGCTTACCAA+TGG 0.533777 2_4:+2480965 Msa0308290:CDS
GGGGAGGCTATCATAAGTAC+TGG 0.534253 2_4:+2480986 Msa0308290:CDS
GCCTCATGTGTCGGTTTGTG+GGG 0.534297 2_4:+2480775 Msa0308290:CDS
AACGCTTCATTCACTATCCT+AGG 0.535019 2_4:-2480251 None:intergenic
GGGAAATGAATTGTTGAGGT+GGG 0.536278 2_4:-2479803 None:intergenic
GAGCGGTGGTTGAGCTTGAA+GGG 0.536459 2_4:-2479726 None:intergenic
CTGACGAGATTAGTAGCACC+TGG 0.538331 2_4:-2480065 None:intergenic
ATTGGCTGGGTCTCCCAGGT+AGG 0.539147 2_4:-2481314 None:intergenic
TTGAAGTTTGCAGGTGCTTG+TGG 0.539914 2_4:+2481361 Msa0308290:CDS
ACAAATGTCTTCGCTTACCC+TGG 0.542915 2_4:+2479894 Msa0308290:CDS
ATCAAGAAGGTAGGGGCCAG+GGG 0.543925 2_4:-2481449 None:intergenic
ACAATGACATCAAGAAGGTA+GGG 0.544765 2_4:-2481457 None:intergenic
ATATCGATCAAAACAGGTCC+AGG 0.546128 2_4:-2480296 None:intergenic
TCAAGAAACTCCGATTGTTG+AGG 0.547823 2_4:+2480175 Msa0308290:CDS
CTTGGGTATGGTTGTCCAGT+GGG 0.549540 2_4:+2481258 Msa0308290:CDS
GTTGTTGAACAATCAACACT+TGG 0.549760 2_4:+2481240 Msa0308290:CDS
GTTACCCAAGGCACCGAAAG+AGG 0.549898 2_4:+2480394 Msa0308290:CDS
GAAATGAATTGTTGAGGTGG+GGG 0.552213 2_4:-2479801 None:intergenic
ATGTCAACCACAATAGCGTC+GGG 0.553806 2_4:-2481139 None:intergenic
GTTCCTCTTATTGCCATCAC+CGG 0.554774 2_4:+2480116 Msa0308290:CDS
ATTCTCATCCGAACTAGGAT+AGG 0.554840 2_4:-2480567 None:intergenic
CACATTTGGAACAGATTGTG+AGG 0.555893 2_4:+2480417 Msa0308290:CDS
AACGAATTCTCATCCGAACT+AGG 0.556901 2_4:-2480572 None:intergenic
GAGATTAGTAGCACCTGGGC+CGG 0.558857 2_4:-2480060 None:intergenic
AAGAACAAGATAATTATGCT+TGG 0.559558 2_4:-2480213 None:intergenic
GGTACAAGAGACCGAGGCAG+TGG 0.562380 2_4:+2481047 Msa0308290:CDS
TGCAGATGCTTGGGATGCAT+GGG 0.563717 2_4:+2480594 Msa0308290:CDS
AAATGAATTGTTGAGGTGGG+GGG 0.565609 2_4:-2479800 None:intergenic
GAGGACGTTACGAATGGCGG+TGG 0.567894 2_4:-2479955 None:intergenic
GCAGAAGTCAACCACTGCCT+CGG 0.568184 2_4:-2481058 None:intergenic
CAGAAAATGTTAGATACCCC+TGG 0.568513 2_4:+2481433 Msa0308290:CDS
ATTTGAAGTTGGCTTTGAAG+GGG 0.570043 2_4:+2480798 Msa0308290:CDS
CAATATGAACAATCTTCGCC+CGG 0.571633 2_4:-2480718 None:intergenic
ACTTATCCTGCCATCACCCT+CGG 0.572531 2_4:-2481542 None:intergenic
GGAAATGAATTGTTGAGGTG+GGG 0.573854 2_4:-2479802 None:intergenic
TACAATGACATCAAGAAGGT+AGG 0.574462 2_4:-2481458 None:intergenic
TCATAACCGAGGGTGATGGC+AGG 0.574956 2_4:+2481536 Msa0308290:CDS
TGGTTGTCCAGTGGGAGGAT+CGG 0.577376 2_4:+2481266 Msa0308290:CDS
GAGCTTGAAGGGAGTGTTTG+GGG 0.580053 2_4:-2479715 None:intergenic
GAACAATCAACACTTGGGTA+TGG 0.580544 2_4:+2481246 Msa0308290:CDS
TATAGAACCGATCCTCCCAC+TGG 0.583559 2_4:-2481273 None:intergenic
TTAGCTTCTAGTGGTAGACC+TGG 0.583844 2_4:+2480278 Msa0308290:CDS
CTCGGTTATGACATCCTCAA+AGG 0.584779 2_4:-2481524 None:intergenic
GGGTATGGTTGTCCAGTGGG+AGG 0.585047 2_4:+2481261 Msa0308290:CDS
CGGCAGCTCGTGTGACAAAG+AGG 0.586144 2_4:+2481389 Msa0308290:CDS
CGGGAAATGAATTGTTGAGG+TGG 0.587217 2_4:-2479804 None:intergenic
AGGTGGAATATTCGCTGCCG+AGG 0.587958 2_4:+2479992 Msa0308290:CDS
TTCCACCTTGTTCGTGACGA+GGG 0.588122 2_4:-2479977 None:intergenic
GGTTTGATGATCGGGTTACT+GGG 0.588175 2_4:+2480675 Msa0308290:CDS
GAGAGTAAGCTTGATTTCGG+AGG 0.590245 2_4:+2480851 Msa0308290:CDS
TTGTTGAACAATCAACACTT+GGG 0.590968 2_4:+2481241 Msa0308290:CDS
GCTATCATAAGTACTGGTGT+TGG 0.593538 2_4:+2480992 Msa0308290:CDS
ATCAACCTATTAGGTTAACT+GGG 0.594575 2_4:+2480360 Msa0308290:CDS
GTCCTCCCTCGTCACGAACA+AGG 0.595803 2_4:+2479972 Msa0308290:CDS
GATGTCATAACCGAGGGTGA+TGG 0.596424 2_4:+2481532 Msa0308290:CDS
CTGCAAACTTCAACATATTG+GGG 0.597132 2_4:-2481351 None:intergenic
TGCCAATCCCGACGCTATTG+TGG 0.597385 2_4:+2481132 Msa0308290:CDS
ACTTATGATAGCCTCCCCAT+TGG 0.598564 2_4:-2480981 None:intergenic
ATTCCACCTTGTTCGTGACG+AGG 0.598895 2_4:-2479978 None:intergenic
AATAGAGCTCACACCTACCT+GGG 0.601839 2_4:+2481301 Msa0308290:CDS
TCGGGTTACTGGGAAGCTTG+AGG 0.605782 2_4:+2480685 Msa0308290:CDS
CTGTTGCTAGTACTTTGATG+GGG 0.606374 2_4:+2480537 Msa0308290:CDS
GTGGTTGACATCGATGGTGA+TGG 0.607155 2_4:+2481151 Msa0308290:CDS
GGCAGCTCGTGTGACAAAGA+GGG 0.609397 2_4:+2481390 Msa0308290:CDS
GAATAAGCAGCCTCATGTGT+CGG 0.610801 2_4:+2480766 Msa0308290:CDS
TTTCCATTGAAGCGCCGCCA+GGG 0.615322 2_4:-2479911 None:intergenic
TTGATGTTGATGATATACCT+AGG 0.619737 2_4:+2480234 Msa0308290:CDS
TTTGAGGATGTCATAACCGA+GGG 0.621237 2_4:+2481526 Msa0308290:CDS
ACGAGGGAGGACGTTACGAA+TGG 0.622770 2_4:-2479961 None:intergenic
GATGTCAACCACAATAGCGT+CGG 0.624097 2_4:-2481140 None:intergenic
GGTGGAATATTCGCTGCCGA+GGG 0.624227 2_4:+2479993 Msa0308290:CDS
GGAGGAACGAGCGTAACCCT+CGG 0.628310 2_4:-2480009 None:intergenic
TGGTGAAGATGAAGAGATGG+TGG 0.629345 2_4:-2479637 None:intergenic
TTGTGGTGAAGATGAAGAGA+TGG 0.630262 2_4:-2479640 None:intergenic
CAATGACATCAAGAAGGTAG+GGG 0.631239 2_4:-2481456 None:intergenic
GGCAACACATGCTCTTGATG+CGG 0.634193 2_4:-2481481 None:intergenic
TGACGAGCTTACCAATGGGG+AGG 0.634568 2_4:+2480970 Msa0308290:CDS
GACTGTTTATGCTAATTATG+CGG 0.636569 2_4:+2480616 Msa0308290:CDS
GCAGACACCAGGGAGACCGG+AGG 0.638324 2_4:-2480027 None:intergenic
CACCTTGTTCGTGACGAGGG+AGG 0.638696 2_4:-2479974 None:intergenic
TTTATAGGTACAAGAGACCG+AGG 0.639559 2_4:+2481041 Msa0308290:CDS
GTGTTGGACAACATCAGATG+TGG 0.643554 2_4:+2481008 Msa0308290:CDS
TGGTAGTTTGAATTGTAGCG+AGG 0.644126 2_4:+2480481 Msa0308290:CDS
AGTACTAGCAACAGGTACAC+CGG 0.645359 2_4:-2480528 None:intergenic
GCGGTACAATGACATCAAGA+AGG 0.647744 2_4:-2481462 None:intergenic
GCTATTGTGGTTGACATCGA+TGG 0.649650 2_4:+2481145 Msa0308290:CDS
ACTTGGGTATGGTTGTCCAG+TGG 0.649969 2_4:+2481257 Msa0308290:CDS
GTCGAAGCACTCGAACGTCA+GGG 0.650703 2_4:+2479867 Msa0308290:CDS
GGTAAGTGATTCTGAAAACG+TGG 0.650896 2_4:-2479680 None:intergenic
AGGGAGGACGTTACGAATGG+CGG 0.657905 2_4:-2479958 None:intergenic
AATCGGGAAATGAATTGTTG+AGG 0.661173 2_4:-2479807 None:intergenic
TCCCCACAAACCGACACATG+AGG 0.664573 2_4:-2480776 None:intergenic
GGTGCTACTAATCTCGTCAG+TGG 0.668110 2_4:+2480068 Msa0308290:CDS
ACCTGTATAGCATACTGCGG+AGG 0.674124 2_4:-2480944 None:intergenic
AGAGATGGTGGTTGTGAACG+CGG 0.674476 2_4:-2479625 None:intergenic
CTTTGAGGATGTCATAACCG+AGG 0.677141 2_4:+2481525 Msa0308290:CDS
GTATATGAATAGGTTACCCA+AGG 0.677418 2_4:+2480382 Msa0308290:CDS
TGTTGGACAACATCAGATGT+GGG 0.692591 2_4:+2481009 Msa0308290:CDS
GACGTTCGAGTGCTTCGACG+AGG 0.694030 2_4:-2479863 None:intergenic
AAGTGGCGATGCAGACACCA+GGG 0.695335 2_4:-2480037 None:intergenic
AATGTCTTCGCTTACCCTGG+CGG 0.697805 2_4:+2479897 Msa0308290:CDS
TCTTGACGAGCTTACCAATG+GGG 0.698334 2_4:+2480967 Msa0308290:CDS
TCAACAACAATATCTTAACA+GGG 0.698879 2_4:-2481225 None:intergenic
CTCCCTCGTCACGAACAAGG+TGG 0.705691 2_4:+2479975 Msa0308290:CDS
TGACGAGATTAGTAGCACCT+GGG 0.711329 2_4:-2480064 None:intergenic
GGAGTTGGCTACTATCAAGG+TGG 0.721822 2_4:+2481195 Msa0308290:CDS
AGAACCTGTATAGCATACTG+CGG 0.744810 2_4:-2480947 None:intergenic
TCAGTACCAATCATTCTCCG+GGG 0.748029 2_4:-2480146 None:intergenic
ATTGTAGCGAGGAATTGAGG+CGG 0.749278 2_4:+2480492 Msa0308290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGAACAAGATAATTATGCT+TGG - chr2_4:2480216-2480235 None:intergenic 25.0%
! TCAAACTTCTTATAACTCAT+CGG - chr2_4:2480914-2480933 None:intergenic 25.0%
! TCAACAACAATATCTTAACA+GGG - chr2_4:2481228-2481247 None:intergenic 25.0%
! TTCAACAACAATATCTTAAC+AGG - chr2_4:2481229-2481248 None:intergenic 25.0%
! AAGAACAAGATAATTATGCT+TGG - chr2_4:2480216-2480235 None:intergenic 25.0%
! TCAAACTTCTTATAACTCAT+CGG - chr2_4:2480914-2480933 None:intergenic 25.0%
! TCAACAACAATATCTTAACA+GGG - chr2_4:2481228-2481247 None:intergenic 25.0%
! TTCAACAACAATATCTTAAC+AGG - chr2_4:2481229-2481248 None:intergenic 25.0%
!! TTGATGTTGATGATATACCT+AGG + chr2_4:2480234-2480253 Msa0308290:CDS 30.0%
TTAGGTATATCGATCAAAAC+AGG - chr2_4:2480305-2480324 None:intergenic 30.0%
!!! TGTTTTGATCGATATACCTA+AGG + chr2_4:2480304-2480323 Msa0308290:CDS 30.0%
ATCAACCTATTAGGTTAACT+GGG + chr2_4:2480360-2480379 Msa0308290:CDS 30.0%
ATATACCCAGTTAACCTAAT+AGG - chr2_4:2480368-2480387 None:intergenic 30.0%
! AAGAAACCTGTTTTGTATGT+TGG + chr2_4:2480455-2480474 Msa0308290:CDS 30.0%
GACTGTTTATGCTAATTATG+CGG + chr2_4:2480616-2480635 Msa0308290:CDS 30.0%
!! AATCGAATTTTGGAGAGTAA+TGG + chr2_4:2480824-2480843 Msa0308290:CDS 30.0%
!! ATCGAATTTTGGAGAGTAAT+GGG + chr2_4:2480825-2480844 Msa0308290:CDS 30.0%
ATAGAGAGTAAGCTTGATTT+CGG + chr2_4:2480848-2480867 Msa0308290:CDS 30.0%
AACTGAATGATCAGAAAGTT+AGG + chr2_4:2480885-2480904 Msa0308290:CDS 30.0%
! AAGCTTTATGATGAATGTTC+AGG + chr2_4:2481174-2481193 Msa0308290:CDS 30.0%
TTGTTGAACAATCAACACTT+GGG + chr2_4:2481241-2481260 Msa0308290:CDS 30.0%
! ATATTTCTTTCTCATTGGCT+GGG - chr2_4:2481330-2481349 None:intergenic 30.0%
AATATTTCTTTCTCATTGGC+TGG - chr2_4:2481331-2481350 None:intergenic 30.0%
!! TTGATGTTGATGATATACCT+AGG + chr2_4:2480234-2480253 Msa0308290:CDS 30.0%
TTAGGTATATCGATCAAAAC+AGG - chr2_4:2480305-2480324 None:intergenic 30.0%
!!! TGTTTTGATCGATATACCTA+AGG + chr2_4:2480304-2480323 Msa0308290:CDS 30.0%
ATCAACCTATTAGGTTAACT+GGG + chr2_4:2480360-2480379 Msa0308290:CDS 30.0%
ATATACCCAGTTAACCTAAT+AGG - chr2_4:2480368-2480387 None:intergenic 30.0%
! AAGAAACCTGTTTTGTATGT+TGG + chr2_4:2480455-2480474 Msa0308290:CDS 30.0%
GACTGTTTATGCTAATTATG+CGG + chr2_4:2480616-2480635 Msa0308290:CDS 30.0%
!! AATCGAATTTTGGAGAGTAA+TGG + chr2_4:2480824-2480843 Msa0308290:CDS 30.0%
!! ATCGAATTTTGGAGAGTAAT+GGG + chr2_4:2480825-2480844 Msa0308290:CDS 30.0%
ATAGAGAGTAAGCTTGATTT+CGG + chr2_4:2480848-2480867 Msa0308290:CDS 30.0%
AACTGAATGATCAGAAAGTT+AGG + chr2_4:2480885-2480904 Msa0308290:CDS 30.0%
! AAGCTTTATGATGAATGTTC+AGG + chr2_4:2481174-2481193 Msa0308290:CDS 30.0%
TTGTTGAACAATCAACACTT+GGG + chr2_4:2481241-2481260 Msa0308290:CDS 30.0%
! ATATTTCTTTCTCATTGGCT+GGG - chr2_4:2481330-2481349 None:intergenic 30.0%
AATATTTCTTTCTCATTGGC+TGG - chr2_4:2481331-2481350 None:intergenic 30.0%
!!! TTTTGGTTTGGAAGTGATTG+TGG - chr2_4:2479660-2479679 None:intergenic 35.0%
!! TGATTCTGAAAACGTGGTTT+TGG - chr2_4:2479677-2479696 None:intergenic 35.0%
AATCGGGAAATGAATTGTTG+AGG - chr2_4:2479810-2479829 None:intergenic 35.0%
GATCTAGTTACCTCAACAAT+CGG - chr2_4:2480188-2480207 None:intergenic 35.0%
!! GCGTTTTTATTAGCTTCTAG+TGG + chr2_4:2480269-2480288 Msa0308290:CDS 35.0%
!! CTAATAGGTTGATCCCAATT+CGG - chr2_4:2480353-2480372 None:intergenic 35.0%
GATCAACCTATTAGGTTAAC+TGG + chr2_4:2480359-2480378 Msa0308290:CDS 35.0%
GGTTAACTGGGTATATGAAT+AGG + chr2_4:2480372-2480391 Msa0308290:CDS 35.0%
GTATATGAATAGGTTACCCA+AGG + chr2_4:2480382-2480401 Msa0308290:CDS 35.0%
ACAGATTGTGAGGTTGTTAT+TGG + chr2_4:2480427-2480446 Msa0308290:CDS 35.0%
! AAACCTGTTTTGTATGTTGG+TGG + chr2_4:2480458-2480477 Msa0308290:CDS 35.0%
ATATTGATGCTGCTGAGATT+GGG + chr2_4:2480741-2480760 Msa0308290:CDS 35.0%
!! GATTTGAAGTTGGCTTTGAA+GGG + chr2_4:2480797-2480816 Msa0308290:CDS 35.0%
!! ATTTGAAGTTGGCTTTGAAG+GGG + chr2_4:2480798-2480817 Msa0308290:CDS 35.0%
TATGATGAATGTTCAGGAGT+TGG + chr2_4:2481180-2481199 Msa0308290:CDS 35.0%
GTTGTTGAACAATCAACACT+TGG + chr2_4:2481240-2481259 Msa0308290:CDS 35.0%
GGGGAATATTTCTTTCTCAT+TGG - chr2_4:2481335-2481354 None:intergenic 35.0%
CTGCAAACTTCAACATATTG+GGG - chr2_4:2481354-2481373 None:intergenic 35.0%
CCTGCAAACTTCAACATATT+GGG - chr2_4:2481355-2481374 None:intergenic 35.0%
ACCTGCAAACTTCAACATAT+TGG - chr2_4:2481356-2481375 None:intergenic 35.0%
ACAATGACATCAAGAAGGTA+GGG - chr2_4:2481460-2481479 None:intergenic 35.0%
TACAATGACATCAAGAAGGT+AGG - chr2_4:2481461-2481480 None:intergenic 35.0%
!!! TTTTGGTTTGGAAGTGATTG+TGG - chr2_4:2479660-2479679 None:intergenic 35.0%
!! TGATTCTGAAAACGTGGTTT+TGG - chr2_4:2479677-2479696 None:intergenic 35.0%
AATCGGGAAATGAATTGTTG+AGG - chr2_4:2479810-2479829 None:intergenic 35.0%
GATCTAGTTACCTCAACAAT+CGG - chr2_4:2480188-2480207 None:intergenic 35.0%
!! GCGTTTTTATTAGCTTCTAG+TGG + chr2_4:2480269-2480288 Msa0308290:CDS 35.0%
!! CTAATAGGTTGATCCCAATT+CGG - chr2_4:2480353-2480372 None:intergenic 35.0%
GATCAACCTATTAGGTTAAC+TGG + chr2_4:2480359-2480378 Msa0308290:CDS 35.0%
GGTTAACTGGGTATATGAAT+AGG + chr2_4:2480372-2480391 Msa0308290:CDS 35.0%
GTATATGAATAGGTTACCCA+AGG + chr2_4:2480382-2480401 Msa0308290:CDS 35.0%
ACAGATTGTGAGGTTGTTAT+TGG + chr2_4:2480427-2480446 Msa0308290:CDS 35.0%
! AAACCTGTTTTGTATGTTGG+TGG + chr2_4:2480458-2480477 Msa0308290:CDS 35.0%
ATATTGATGCTGCTGAGATT+GGG + chr2_4:2480741-2480760 Msa0308290:CDS 35.0%
!! GATTTGAAGTTGGCTTTGAA+GGG + chr2_4:2480797-2480816 Msa0308290:CDS 35.0%
!! ATTTGAAGTTGGCTTTGAAG+GGG + chr2_4:2480798-2480817 Msa0308290:CDS 35.0%
TATGATGAATGTTCAGGAGT+TGG + chr2_4:2481180-2481199 Msa0308290:CDS 35.0%
GTTGTTGAACAATCAACACT+TGG + chr2_4:2481240-2481259 Msa0308290:CDS 35.0%
GGGGAATATTTCTTTCTCAT+TGG - chr2_4:2481335-2481354 None:intergenic 35.0%
CTGCAAACTTCAACATATTG+GGG - chr2_4:2481354-2481373 None:intergenic 35.0%
CCTGCAAACTTCAACATATT+GGG - chr2_4:2481355-2481374 None:intergenic 35.0%
ACCTGCAAACTTCAACATAT+TGG - chr2_4:2481356-2481375 None:intergenic 35.0%
ACAATGACATCAAGAAGGTA+GGG - chr2_4:2481460-2481479 None:intergenic 35.0%
TACAATGACATCAAGAAGGT+AGG - chr2_4:2481461-2481480 None:intergenic 35.0%
TTGTGGTGAAGATGAAGAGA+TGG - chr2_4:2479643-2479662 None:intergenic 40.0%
!!! CTGAAAACGTGGTTTTGGTT+TGG - chr2_4:2479672-2479691 None:intergenic 40.0%
! GGTAAGTGATTCTGAAAACG+TGG - chr2_4:2479683-2479702 None:intergenic 40.0%
TGTTTGGGGAAGTGGAAAAT+GGG - chr2_4:2479704-2479723 None:intergenic 40.0%
!!! TTTTTGAGTAGGGTTGGAGA+TGG - chr2_4:2479769-2479788 None:intergenic 40.0%
!!! AGTGGTTTTTTGAGTAGGGT+TGG - chr2_4:2479775-2479794 None:intergenic 40.0%
!!! TGGGAGTGGTTTTTTGAGTA+GGG - chr2_4:2479779-2479798 None:intergenic 40.0%
!!! ATGGGAGTGGTTTTTTGAGT+AGG - chr2_4:2479780-2479799 None:intergenic 40.0%
AAATGAATTGTTGAGGTGGG+GGG - chr2_4:2479803-2479822 None:intergenic 40.0%
GAAATGAATTGTTGAGGTGG+GGG - chr2_4:2479804-2479823 None:intergenic 40.0%
GGAAATGAATTGTTGAGGTG+GGG - chr2_4:2479805-2479824 None:intergenic 40.0%
GGGAAATGAATTGTTGAGGT+GGG - chr2_4:2479806-2479825 None:intergenic 40.0%
ATCAGTACCAATCATTCTCC+GGG - chr2_4:2480150-2480169 None:intergenic 40.0%
CATCAGTACCAATCATTCTC+CGG - chr2_4:2480151-2480170 None:intergenic 40.0%
TCAAGAAACTCCGATTGTTG+AGG + chr2_4:2480175-2480194 Msa0308290:CDS 40.0%
AACGCTTCATTCACTATCCT+AGG - chr2_4:2480254-2480273 None:intergenic 40.0%
ATATCGATCAAAACAGGTCC+AGG - chr2_4:2480299-2480318 None:intergenic 40.0%
ACCTAAGGATATTCAGCAAC+AGG + chr2_4:2480319-2480338 Msa0308290:CDS 40.0%
ACCTGTTGCTGAATATCCTT+AGG - chr2_4:2480323-2480342 None:intergenic 40.0%
AACAGGTTTCTGTTCCGAAT+TGG + chr2_4:2480336-2480355 Msa0308290:CDS 40.0%
ACAGGTTTCTGTTCCGAATT+GGG + chr2_4:2480337-2480356 Msa0308290:CDS 40.0%
CGAATTGGGATCAACCTATT+AGG + chr2_4:2480351-2480370 Msa0308290:CDS 40.0%
TGTTCCAAATGTGCCTCTTT+CGG - chr2_4:2480410-2480429 None:intergenic 40.0%
! CACATTTGGAACAGATTGTG+AGG + chr2_4:2480417-2480436 Msa0308290:CDS 40.0%
TGGTAGTTTGAATTGTAGCG+AGG + chr2_4:2480481-2480500 Msa0308290:CDS 40.0%
TGAATTGTAGCGAGGAATTG+AGG + chr2_4:2480489-2480508 Msa0308290:CDS 40.0%
ACCTGTTGCTAGTACTTTGA+TGG + chr2_4:2480535-2480554 Msa0308290:CDS 40.0%
CCTGTTGCTAGTACTTTGAT+GGG + chr2_4:2480536-2480555 Msa0308290:CDS 40.0%
CTGTTGCTAGTACTTTGATG+GGG + chr2_4:2480537-2480556 Msa0308290:CDS 40.0%
ATTCTCATCCGAACTAGGAT+AGG - chr2_4:2480570-2480589 None:intergenic 40.0%
AACGAATTCTCATCCGAACT+AGG - chr2_4:2480575-2480594 None:intergenic 40.0%
AGAATTCGTTGCAGATGCTT+GGG + chr2_4:2480585-2480604 Msa0308290:CDS 40.0%
! AGTGATCTTTTGCTTGCGTT+TGG + chr2_4:2480647-2480666 Msa0308290:CDS 40.0%
! GTGATCTTTTGCTTGCGTTT+GGG + chr2_4:2480648-2480667 Msa0308290:CDS 40.0%
! TGATCTTTTGCTTGCGTTTG+GGG + chr2_4:2480649-2480668 Msa0308290:CDS 40.0%
! TTGGGGTTAGGTTTGATGAT+CGG + chr2_4:2480666-2480685 Msa0308290:CDS 40.0%
CAATATGAACAATCTTCGCC+CGG - chr2_4:2480721-2480740 None:intergenic 40.0%
GATATTGATGCTGCTGAGAT+TGG + chr2_4:2480740-2480759 Msa0308290:CDS 40.0%
!! GGATTTGAAGTTGGCTTTGA+AGG + chr2_4:2480796-2480815 Msa0308290:CDS 40.0%
! GAAGGGGATCAATCGAATTT+TGG + chr2_4:2480814-2480833 Msa0308290:CDS 40.0%
AGAACCTGTATAGCATACTG+CGG - chr2_4:2480950-2480969 None:intergenic 40.0%
TTCTTGACGAGCTTACCAAT+GGG + chr2_4:2480966-2480985 Msa0308290:CDS 40.0%
!! GCTATCATAAGTACTGGTGT+TGG + chr2_4:2480992-2481011 Msa0308290:CDS 40.0%
TGTTGGACAACATCAGATGT+GGG + chr2_4:2481009-2481028 Msa0308290:CDS 40.0%
TTTATAGGTACAAGAGACCG+AGG + chr2_4:2481041-2481060 Msa0308290:CDS 40.0%
GAACAATCAACACTTGGGTA+TGG + chr2_4:2481246-2481265 Msa0308290:CDS 40.0%
CCCAATATGTTGAAGTTTGC+AGG + chr2_4:2481352-2481371 Msa0308290:CDS 40.0%
! TTTTCTGAATCGCTGCTCTA+AGG - chr2_4:2481420-2481439 None:intergenic 40.0%
CAGAAAATGTTAGATACCCC+TGG + chr2_4:2481433-2481452 Msa0308290:CDS 40.0%
CAATGACATCAAGAAGGTAG+GGG - chr2_4:2481459-2481478 None:intergenic 40.0%
TTGCCAATGATTCCTGCAAA+TGG + chr2_4:2481499-2481518 Msa0308290:CDS 40.0%
GATCCATTTGCAGGAATCAT+TGG - chr2_4:2481505-2481524 None:intergenic 40.0%
TTTGAGGATGTCATAACCGA+GGG + chr2_4:2481526-2481545 Msa0308290:CDS 40.0%
TTGTGGTGAAGATGAAGAGA+TGG - chr2_4:2479643-2479662 None:intergenic 40.0%
!!! CTGAAAACGTGGTTTTGGTT+TGG - chr2_4:2479672-2479691 None:intergenic 40.0%
! GGTAAGTGATTCTGAAAACG+TGG - chr2_4:2479683-2479702 None:intergenic 40.0%
TGTTTGGGGAAGTGGAAAAT+GGG - chr2_4:2479704-2479723 None:intergenic 40.0%
!!! TTTTTGAGTAGGGTTGGAGA+TGG - chr2_4:2479769-2479788 None:intergenic 40.0%
!!! AGTGGTTTTTTGAGTAGGGT+TGG - chr2_4:2479775-2479794 None:intergenic 40.0%
!!! TGGGAGTGGTTTTTTGAGTA+GGG - chr2_4:2479779-2479798 None:intergenic 40.0%
!!! ATGGGAGTGGTTTTTTGAGT+AGG - chr2_4:2479780-2479799 None:intergenic 40.0%
AAATGAATTGTTGAGGTGGG+GGG - chr2_4:2479803-2479822 None:intergenic 40.0%
GAAATGAATTGTTGAGGTGG+GGG - chr2_4:2479804-2479823 None:intergenic 40.0%
GGAAATGAATTGTTGAGGTG+GGG - chr2_4:2479805-2479824 None:intergenic 40.0%
GGGAAATGAATTGTTGAGGT+GGG - chr2_4:2479806-2479825 None:intergenic 40.0%
ATCAGTACCAATCATTCTCC+GGG - chr2_4:2480150-2480169 None:intergenic 40.0%
CATCAGTACCAATCATTCTC+CGG - chr2_4:2480151-2480170 None:intergenic 40.0%
TCAAGAAACTCCGATTGTTG+AGG + chr2_4:2480175-2480194 Msa0308290:CDS 40.0%
AACGCTTCATTCACTATCCT+AGG - chr2_4:2480254-2480273 None:intergenic 40.0%
ATATCGATCAAAACAGGTCC+AGG - chr2_4:2480299-2480318 None:intergenic 40.0%
ACCTAAGGATATTCAGCAAC+AGG + chr2_4:2480319-2480338 Msa0308290:CDS 40.0%
ACCTGTTGCTGAATATCCTT+AGG - chr2_4:2480323-2480342 None:intergenic 40.0%
AACAGGTTTCTGTTCCGAAT+TGG + chr2_4:2480336-2480355 Msa0308290:CDS 40.0%
ACAGGTTTCTGTTCCGAATT+GGG + chr2_4:2480337-2480356 Msa0308290:CDS 40.0%
CGAATTGGGATCAACCTATT+AGG + chr2_4:2480351-2480370 Msa0308290:CDS 40.0%
TGTTCCAAATGTGCCTCTTT+CGG - chr2_4:2480410-2480429 None:intergenic 40.0%
! CACATTTGGAACAGATTGTG+AGG + chr2_4:2480417-2480436 Msa0308290:CDS 40.0%
TGGTAGTTTGAATTGTAGCG+AGG + chr2_4:2480481-2480500 Msa0308290:CDS 40.0%
TGAATTGTAGCGAGGAATTG+AGG + chr2_4:2480489-2480508 Msa0308290:CDS 40.0%
ACCTGTTGCTAGTACTTTGA+TGG + chr2_4:2480535-2480554 Msa0308290:CDS 40.0%
CCTGTTGCTAGTACTTTGAT+GGG + chr2_4:2480536-2480555 Msa0308290:CDS 40.0%
CTGTTGCTAGTACTTTGATG+GGG + chr2_4:2480537-2480556 Msa0308290:CDS 40.0%
ATTCTCATCCGAACTAGGAT+AGG - chr2_4:2480570-2480589 None:intergenic 40.0%
AACGAATTCTCATCCGAACT+AGG - chr2_4:2480575-2480594 None:intergenic 40.0%
AGAATTCGTTGCAGATGCTT+GGG + chr2_4:2480585-2480604 Msa0308290:CDS 40.0%
! AGTGATCTTTTGCTTGCGTT+TGG + chr2_4:2480647-2480666 Msa0308290:CDS 40.0%
! GTGATCTTTTGCTTGCGTTT+GGG + chr2_4:2480648-2480667 Msa0308290:CDS 40.0%
! TGATCTTTTGCTTGCGTTTG+GGG + chr2_4:2480649-2480668 Msa0308290:CDS 40.0%
! TTGGGGTTAGGTTTGATGAT+CGG + chr2_4:2480666-2480685 Msa0308290:CDS 40.0%
CAATATGAACAATCTTCGCC+CGG - chr2_4:2480721-2480740 None:intergenic 40.0%
GATATTGATGCTGCTGAGAT+TGG + chr2_4:2480740-2480759 Msa0308290:CDS 40.0%
!! GGATTTGAAGTTGGCTTTGA+AGG + chr2_4:2480796-2480815 Msa0308290:CDS 40.0%
! GAAGGGGATCAATCGAATTT+TGG + chr2_4:2480814-2480833 Msa0308290:CDS 40.0%
AGAACCTGTATAGCATACTG+CGG - chr2_4:2480950-2480969 None:intergenic 40.0%
TTCTTGACGAGCTTACCAAT+GGG + chr2_4:2480966-2480985 Msa0308290:CDS 40.0%
!! GCTATCATAAGTACTGGTGT+TGG + chr2_4:2480992-2481011 Msa0308290:CDS 40.0%
TGTTGGACAACATCAGATGT+GGG + chr2_4:2481009-2481028 Msa0308290:CDS 40.0%
TTTATAGGTACAAGAGACCG+AGG + chr2_4:2481041-2481060 Msa0308290:CDS 40.0%
GAACAATCAACACTTGGGTA+TGG + chr2_4:2481246-2481265 Msa0308290:CDS 40.0%
CCCAATATGTTGAAGTTTGC+AGG + chr2_4:2481352-2481371 Msa0308290:CDS 40.0%
! TTTTCTGAATCGCTGCTCTA+AGG - chr2_4:2481420-2481439 None:intergenic 40.0%
CAGAAAATGTTAGATACCCC+TGG + chr2_4:2481433-2481452 Msa0308290:CDS 40.0%
CAATGACATCAAGAAGGTAG+GGG - chr2_4:2481459-2481478 None:intergenic 40.0%
TTGCCAATGATTCCTGCAAA+TGG + chr2_4:2481499-2481518 Msa0308290:CDS 40.0%
GATCCATTTGCAGGAATCAT+TGG - chr2_4:2481505-2481524 None:intergenic 40.0%
TTTGAGGATGTCATAACCGA+GGG + chr2_4:2481526-2481545 Msa0308290:CDS 40.0%
TGGTGAAGATGAAGAGATGG+TGG - chr2_4:2479640-2479659 None:intergenic 45.0%
GTGTTTGGGGAAGTGGAAAA+TGG - chr2_4:2479705-2479724 None:intergenic 45.0%
!! TGAGCTTGAAGGGAGTGTTT+GGG - chr2_4:2479719-2479738 None:intergenic 45.0%
!! TTGAGCTTGAAGGGAGTGTT+TGG - chr2_4:2479720-2479739 None:intergenic 45.0%
!! AAGCGGAGATTTTGAGAGAG+CGG - chr2_4:2479746-2479765 None:intergenic 45.0%
CGGGAAATGAATTGTTGAGG+TGG - chr2_4:2479807-2479826 None:intergenic 45.0%
ACAAATGTCTTCGCTTACCC+TGG + chr2_4:2479894-2479913 Msa0308290:CDS 45.0%
TGACGAGATTAGTAGCACCT+GGG - chr2_4:2480067-2480086 None:intergenic 45.0%
GTTCCTCTTATTGCCATCAC+CGG + chr2_4:2480116-2480135 Msa0308290:CDS 45.0%
TCAGTACCAATCATTCTCCG+GGG - chr2_4:2480149-2480168 None:intergenic 45.0%
TTAGCTTCTAGTGGTAGACC+TGG + chr2_4:2480278-2480297 Msa0308290:CDS 45.0%
CCACCACCAACATACAAAAC+AGG - chr2_4:2480464-2480483 None:intergenic 45.0%
!! CCTGTTTTGTATGTTGGTGG+TGG + chr2_4:2480461-2480480 Msa0308290:CDS 45.0%
ATTGTAGCGAGGAATTGAGG+CGG + chr2_4:2480492-2480511 Msa0308290:CDS 45.0%
!! AGGCGGTTTGTTGAGTTAAC+CGG + chr2_4:2480509-2480528 Msa0308290:CDS 45.0%
AGTACTAGCAACAGGTACAC+CGG - chr2_4:2480531-2480550 None:intergenic 45.0%
! CCCATCAAAGTACTAGCAAC+AGG - chr2_4:2480539-2480558 None:intergenic 45.0%
TGCTAGTACTTTGATGGGGT+TGG + chr2_4:2480541-2480560 Msa0308290:CDS 45.0%
GCTAGTACTTTGATGGGGTT+GGG + chr2_4:2480542-2480561 Msa0308290:CDS 45.0%
GTTGGGTTCCTATCCTAGTT+CGG + chr2_4:2480559-2480578 Msa0308290:CDS 45.0%
GAGAATTCGTTGCAGATGCT+TGG + chr2_4:2480584-2480603 Msa0308290:CDS 45.0%
!! TTTTGCTTGCGTTTGGGGTT+AGG + chr2_4:2480654-2480673 Msa0308290:CDS 45.0%
! TGGGGTTAGGTTTGATGATC+GGG + chr2_4:2480667-2480686 Msa0308290:CDS 45.0%
! AGGTTTGATGATCGGGTTAC+TGG + chr2_4:2480674-2480693 Msa0308290:CDS 45.0%
! GGTTTGATGATCGGGTTACT+GGG + chr2_4:2480675-2480694 Msa0308290:CDS 45.0%
GAATAAGCAGCCTCATGTGT+CGG + chr2_4:2480766-2480785 Msa0308290:CDS 45.0%
! GGTTTGTGGGGATTTGAAGT+TGG + chr2_4:2480787-2480806 Msa0308290:CDS 45.0%
GAGAGTAAGCTTGATTTCGG+AGG + chr2_4:2480851-2480870 Msa0308290:CDS 45.0%
GTAAGCTTGATTTCGGAGGT+TGG + chr2_4:2480855-2480874 Msa0308290:CDS 45.0%
GTTCTTGACGAGCTTACCAA+TGG + chr2_4:2480965-2480984 Msa0308290:CDS 45.0%
TCTTGACGAGCTTACCAATG+GGG + chr2_4:2480967-2480986 Msa0308290:CDS 45.0%
ACTTATGATAGCCTCCCCAT+TGG - chr2_4:2480984-2481003 None:intergenic 45.0%
GTGTTGGACAACATCAGATG+TGG + chr2_4:2481008-2481027 Msa0308290:CDS 45.0%
!! TGTGGGCTGCTCAGTTTTAT+AGG + chr2_4:2481026-2481045 Msa0308290:CDS 45.0%
ATGTCAACCACAATAGCGTC+GGG - chr2_4:2481142-2481161 None:intergenic 45.0%
GATGTCAACCACAATAGCGT+CGG - chr2_4:2481143-2481162 None:intergenic 45.0%
GCTATTGTGGTTGACATCGA+TGG + chr2_4:2481145-2481164 Msa0308290:CDS 45.0%
TCAGGAGTTGGCTACTATCA+AGG + chr2_4:2481192-2481211 Msa0308290:CDS 45.0%
AATAGAGCTCACACCTACCT+GGG + chr2_4:2481301-2481320 Msa0308290:CDS 45.0%
TTGAAGTTTGCAGGTGCTTG+TGG + chr2_4:2481361-2481380 Msa0308290:CDS 45.0%
GCGGTACAATGACATCAAGA+AGG - chr2_4:2481465-2481484 None:intergenic 45.0%
TCCTGCAAATGGATCCTTTG+AGG + chr2_4:2481510-2481529 Msa0308290:CDS 45.0%
TCCTCAAAGGATCCATTTGC+AGG - chr2_4:2481514-2481533 None:intergenic 45.0%
CTCGGTTATGACATCCTCAA+AGG - chr2_4:2481527-2481546 None:intergenic 45.0%
! CTTTGAGGATGTCATAACCG+AGG + chr2_4:2481525-2481544 Msa0308290:CDS 45.0%
TGGTGAAGATGAAGAGATGG+TGG - chr2_4:2479640-2479659 None:intergenic 45.0%
GTGTTTGGGGAAGTGGAAAA+TGG - chr2_4:2479705-2479724 None:intergenic 45.0%
!! TGAGCTTGAAGGGAGTGTTT+GGG - chr2_4:2479719-2479738 None:intergenic 45.0%
!! TTGAGCTTGAAGGGAGTGTT+TGG - chr2_4:2479720-2479739 None:intergenic 45.0%
!! AAGCGGAGATTTTGAGAGAG+CGG - chr2_4:2479746-2479765 None:intergenic 45.0%
CGGGAAATGAATTGTTGAGG+TGG - chr2_4:2479807-2479826 None:intergenic 45.0%
ACAAATGTCTTCGCTTACCC+TGG + chr2_4:2479894-2479913 Msa0308290:CDS 45.0%
TGACGAGATTAGTAGCACCT+GGG - chr2_4:2480067-2480086 None:intergenic 45.0%
GTTCCTCTTATTGCCATCAC+CGG + chr2_4:2480116-2480135 Msa0308290:CDS 45.0%
TCAGTACCAATCATTCTCCG+GGG - chr2_4:2480149-2480168 None:intergenic 45.0%
TTAGCTTCTAGTGGTAGACC+TGG + chr2_4:2480278-2480297 Msa0308290:CDS 45.0%
CCACCACCAACATACAAAAC+AGG - chr2_4:2480464-2480483 None:intergenic 45.0%
!! CCTGTTTTGTATGTTGGTGG+TGG + chr2_4:2480461-2480480 Msa0308290:CDS 45.0%
ATTGTAGCGAGGAATTGAGG+CGG + chr2_4:2480492-2480511 Msa0308290:CDS 45.0%
!! AGGCGGTTTGTTGAGTTAAC+CGG + chr2_4:2480509-2480528 Msa0308290:CDS 45.0%
AGTACTAGCAACAGGTACAC+CGG - chr2_4:2480531-2480550 None:intergenic 45.0%
! CCCATCAAAGTACTAGCAAC+AGG - chr2_4:2480539-2480558 None:intergenic 45.0%
TGCTAGTACTTTGATGGGGT+TGG + chr2_4:2480541-2480560 Msa0308290:CDS 45.0%
GCTAGTACTTTGATGGGGTT+GGG + chr2_4:2480542-2480561 Msa0308290:CDS 45.0%
GTTGGGTTCCTATCCTAGTT+CGG + chr2_4:2480559-2480578 Msa0308290:CDS 45.0%
GAGAATTCGTTGCAGATGCT+TGG + chr2_4:2480584-2480603 Msa0308290:CDS 45.0%
!! TTTTGCTTGCGTTTGGGGTT+AGG + chr2_4:2480654-2480673 Msa0308290:CDS 45.0%
! TGGGGTTAGGTTTGATGATC+GGG + chr2_4:2480667-2480686 Msa0308290:CDS 45.0%
! AGGTTTGATGATCGGGTTAC+TGG + chr2_4:2480674-2480693 Msa0308290:CDS 45.0%
! GGTTTGATGATCGGGTTACT+GGG + chr2_4:2480675-2480694 Msa0308290:CDS 45.0%
GAATAAGCAGCCTCATGTGT+CGG + chr2_4:2480766-2480785 Msa0308290:CDS 45.0%
! GGTTTGTGGGGATTTGAAGT+TGG + chr2_4:2480787-2480806 Msa0308290:CDS 45.0%
GAGAGTAAGCTTGATTTCGG+AGG + chr2_4:2480851-2480870 Msa0308290:CDS 45.0%
GTAAGCTTGATTTCGGAGGT+TGG + chr2_4:2480855-2480874 Msa0308290:CDS 45.0%
GTTCTTGACGAGCTTACCAA+TGG + chr2_4:2480965-2480984 Msa0308290:CDS 45.0%
TCTTGACGAGCTTACCAATG+GGG + chr2_4:2480967-2480986 Msa0308290:CDS 45.0%
ACTTATGATAGCCTCCCCAT+TGG - chr2_4:2480984-2481003 None:intergenic 45.0%
GTGTTGGACAACATCAGATG+TGG + chr2_4:2481008-2481027 Msa0308290:CDS 45.0%
!! TGTGGGCTGCTCAGTTTTAT+AGG + chr2_4:2481026-2481045 Msa0308290:CDS 45.0%
ATGTCAACCACAATAGCGTC+GGG - chr2_4:2481142-2481161 None:intergenic 45.0%
GATGTCAACCACAATAGCGT+CGG - chr2_4:2481143-2481162 None:intergenic 45.0%
GCTATTGTGGTTGACATCGA+TGG + chr2_4:2481145-2481164 Msa0308290:CDS 45.0%
TCAGGAGTTGGCTACTATCA+AGG + chr2_4:2481192-2481211 Msa0308290:CDS 45.0%
AATAGAGCTCACACCTACCT+GGG + chr2_4:2481301-2481320 Msa0308290:CDS 45.0%
TTGAAGTTTGCAGGTGCTTG+TGG + chr2_4:2481361-2481380 Msa0308290:CDS 45.0%
GCGGTACAATGACATCAAGA+AGG - chr2_4:2481465-2481484 None:intergenic 45.0%
TCCTGCAAATGGATCCTTTG+AGG + chr2_4:2481510-2481529 Msa0308290:CDS 45.0%
TCCTCAAAGGATCCATTTGC+AGG - chr2_4:2481514-2481533 None:intergenic 45.0%
CTCGGTTATGACATCCTCAA+AGG - chr2_4:2481527-2481546 None:intergenic 45.0%
! CTTTGAGGATGTCATAACCG+AGG + chr2_4:2481525-2481544 Msa0308290:CDS 45.0%
! AGAGATGGTGGTTGTGAACG+CGG - chr2_4:2479628-2479647 None:intergenic 50.0%
!! GAGCTTGAAGGGAGTGTTTG+GGG - chr2_4:2479718-2479737 None:intergenic 50.0%
AGTAGGGTTGGAGATGGAAG+CGG - chr2_4:2479763-2479782 None:intergenic 50.0%
AATTGTTGAGGTGGGGGGAT+GGG - chr2_4:2479798-2479817 None:intergenic 50.0%
! AGGATATCTGCGCCTTTTCG+GGG - chr2_4:2479846-2479865 None:intergenic 50.0%
! GAGGATATCTGCGCCTTTTC+GGG - chr2_4:2479847-2479866 None:intergenic 50.0%
! CGAGGATATCTGCGCCTTTT+CGG - chr2_4:2479848-2479867 None:intergenic 50.0%
AATGTCTTCGCTTACCCTGG+CGG + chr2_4:2479897-2479916 Msa0308290:CDS 50.0%
TTCCACCTTGTTCGTGACGA+GGG - chr2_4:2479980-2479999 None:intergenic 50.0%
ATTCCACCTTGTTCGTGACG+AGG - chr2_4:2479981-2480000 None:intergenic 50.0%
CTGACGAGATTAGTAGCACC+TGG - chr2_4:2480068-2480087 None:intergenic 50.0%
!! GGTGCTACTAATCTCGTCAG+TGG + chr2_4:2480068-2480087 Msa0308290:CDS 50.0%
! TGACCGGTGATGGCAATAAG+AGG - chr2_4:2480122-2480141 None:intergenic 50.0%
TCTTATTGCCATCACCGGTC+AGG + chr2_4:2480121-2480140 Msa0308290:CDS 50.0%
TTGCAGATGCTTGGGATGCA+TGG + chr2_4:2480593-2480612 Msa0308290:CDS 50.0%
TGCAGATGCTTGGGATGCAT+GGG + chr2_4:2480594-2480613 Msa0308290:CDS 50.0%
!! AGCCTCATGTGTCGGTTTGT+GGG + chr2_4:2480774-2480793 Msa0308290:CDS 50.0%
TCCTCCGCAGTATGCTATAC+AGG + chr2_4:2480943-2480962 Msa0308290:CDS 50.0%
ACCTGTATAGCATACTGCGG+AGG - chr2_4:2480947-2480966 None:intergenic 50.0%
GGGGAGGCTATCATAAGTAC+TGG + chr2_4:2480986-2481005 Msa0308290:CDS 50.0%
! TGGTTGACTTCTGCTGGTCT+TGG + chr2_4:2481067-2481086 Msa0308290:CDS 50.0%
CGCTATGGGATTTGGATTGC+CGG + chr2_4:2481090-2481109 Msa0308290:CDS 50.0%
! AACCACAATAGCGTCGGGAT+TGG - chr2_4:2481137-2481156 None:intergenic 50.0%
GTGGTTGACATCGATGGTGA+TGG + chr2_4:2481151-2481170 Msa0308290:CDS 50.0%
GGAGTTGGCTACTATCAAGG+TGG + chr2_4:2481195-2481214 Msa0308290:CDS 50.0%
ACTTGGGTATGGTTGTCCAG+TGG + chr2_4:2481257-2481276 Msa0308290:CDS 50.0%
CTTGGGTATGGTTGTCCAGT+GGG + chr2_4:2481258-2481277 Msa0308290:CDS 50.0%
TATAGAACCGATCCTCCCAC+TGG - chr2_4:2481276-2481295 None:intergenic 50.0%
CAGGTAGGTGTGAGCTCTAT+TGG - chr2_4:2481302-2481321 None:intergenic 50.0%
CAATAGAGCTCACACCTACC+TGG + chr2_4:2481300-2481319 Msa0308290:CDS 50.0%
TGCAGGTGCTTGTGGTATAC+CGG + chr2_4:2481369-2481388 Msa0308290:CDS 50.0%
GGCAACACATGCTCTTGATG+CGG - chr2_4:2481484-2481503 None:intergenic 50.0%
GATGTCATAACCGAGGGTGA+TGG + chr2_4:2481532-2481551 Msa0308290:CDS 50.0%
ACTTATCCTGCCATCACCCT+CGG - chr2_4:2481545-2481564 None:intergenic 50.0%
! AGAGATGGTGGTTGTGAACG+CGG - chr2_4:2479628-2479647 None:intergenic 50.0%
!! GAGCTTGAAGGGAGTGTTTG+GGG - chr2_4:2479718-2479737 None:intergenic 50.0%
AGTAGGGTTGGAGATGGAAG+CGG - chr2_4:2479763-2479782 None:intergenic 50.0%
AATTGTTGAGGTGGGGGGAT+GGG - chr2_4:2479798-2479817 None:intergenic 50.0%
! AGGATATCTGCGCCTTTTCG+GGG - chr2_4:2479846-2479865 None:intergenic 50.0%
! GAGGATATCTGCGCCTTTTC+GGG - chr2_4:2479847-2479866 None:intergenic 50.0%
! CGAGGATATCTGCGCCTTTT+CGG - chr2_4:2479848-2479867 None:intergenic 50.0%
AATGTCTTCGCTTACCCTGG+CGG + chr2_4:2479897-2479916 Msa0308290:CDS 50.0%
TTCCACCTTGTTCGTGACGA+GGG - chr2_4:2479980-2479999 None:intergenic 50.0%
ATTCCACCTTGTTCGTGACG+AGG - chr2_4:2479981-2480000 None:intergenic 50.0%
CTGACGAGATTAGTAGCACC+TGG - chr2_4:2480068-2480087 None:intergenic 50.0%
!! GGTGCTACTAATCTCGTCAG+TGG + chr2_4:2480068-2480087 Msa0308290:CDS 50.0%
! TGACCGGTGATGGCAATAAG+AGG - chr2_4:2480122-2480141 None:intergenic 50.0%
TCTTATTGCCATCACCGGTC+AGG + chr2_4:2480121-2480140 Msa0308290:CDS 50.0%
TTGCAGATGCTTGGGATGCA+TGG + chr2_4:2480593-2480612 Msa0308290:CDS 50.0%
TGCAGATGCTTGGGATGCAT+GGG + chr2_4:2480594-2480613 Msa0308290:CDS 50.0%
!! AGCCTCATGTGTCGGTTTGT+GGG + chr2_4:2480774-2480793 Msa0308290:CDS 50.0%
TCCTCCGCAGTATGCTATAC+AGG + chr2_4:2480943-2480962 Msa0308290:CDS 50.0%
ACCTGTATAGCATACTGCGG+AGG - chr2_4:2480947-2480966 None:intergenic 50.0%
GGGGAGGCTATCATAAGTAC+TGG + chr2_4:2480986-2481005 Msa0308290:CDS 50.0%
! TGGTTGACTTCTGCTGGTCT+TGG + chr2_4:2481067-2481086 Msa0308290:CDS 50.0%
CGCTATGGGATTTGGATTGC+CGG + chr2_4:2481090-2481109 Msa0308290:CDS 50.0%
! AACCACAATAGCGTCGGGAT+TGG - chr2_4:2481137-2481156 None:intergenic 50.0%
GTGGTTGACATCGATGGTGA+TGG + chr2_4:2481151-2481170 Msa0308290:CDS 50.0%
GGAGTTGGCTACTATCAAGG+TGG + chr2_4:2481195-2481214 Msa0308290:CDS 50.0%
ACTTGGGTATGGTTGTCCAG+TGG + chr2_4:2481257-2481276 Msa0308290:CDS 50.0%
CTTGGGTATGGTTGTCCAGT+GGG + chr2_4:2481258-2481277 Msa0308290:CDS 50.0%
TATAGAACCGATCCTCCCAC+TGG - chr2_4:2481276-2481295 None:intergenic 50.0%
CAGGTAGGTGTGAGCTCTAT+TGG - chr2_4:2481302-2481321 None:intergenic 50.0%
CAATAGAGCTCACACCTACC+TGG + chr2_4:2481300-2481319 Msa0308290:CDS 50.0%
TGCAGGTGCTTGTGGTATAC+CGG + chr2_4:2481369-2481388 Msa0308290:CDS 50.0%
GGCAACACATGCTCTTGATG+CGG - chr2_4:2481484-2481503 None:intergenic 50.0%
GATGTCATAACCGAGGGTGA+TGG + chr2_4:2481532-2481551 Msa0308290:CDS 50.0%
ACTTATCCTGCCATCACCCT+CGG - chr2_4:2481545-2481564 None:intergenic 50.0%
! GAACGCGGTTTTTGCAGCAG+TGG - chr2_4:2479613-2479632 None:intergenic 55.0%
!! GAAGGGAGTGTTTGGGGAAG+TGG - chr2_4:2479712-2479731 None:intergenic 55.0%
GAGCGGTGGTTGAGCTTGAA+GGG - chr2_4:2479729-2479748 None:intergenic 55.0%
AGAGCGGTGGTTGAGCTTGA+AGG - chr2_4:2479730-2479749 None:intergenic 55.0%
!! CGGAGATTTTGAGAGAGCGG+TGG - chr2_4:2479743-2479762 None:intergenic 55.0%
GAATTGTTGAGGTGGGGGGA+TGG - chr2_4:2479799-2479818 None:intergenic 55.0%
GGGTTCGTTAGGGGCAAATC+GGG - chr2_4:2479826-2479845 None:intergenic 55.0%
GGGGTTCGTTAGGGGCAAAT+CGG - chr2_4:2479827-2479846 None:intergenic 55.0%
!! GCCTTTTCGGGGTTCGTTAG+GGG - chr2_4:2479835-2479854 None:intergenic 55.0%
!! CGCCTTTTCGGGGTTCGTTA+GGG - chr2_4:2479836-2479855 None:intergenic 55.0%
! GTCGAAGCACTCGAACGTCA+GGG + chr2_4:2479867-2479886 Msa0308290:CDS 55.0%
!! TTTCCATTGAAGCGCCGCCA+GGG - chr2_4:2479914-2479933 None:intergenic 55.0%
!! ATTTCCATTGAAGCGCCGCC+AGG - chr2_4:2479915-2479934 None:intergenic 55.0%
AGGGAGGACGTTACGAATGG+CGG - chr2_4:2479961-2479980 None:intergenic 55.0%
ACGAGGGAGGACGTTACGAA+TGG - chr2_4:2479964-2479983 None:intergenic 55.0%
AGGTGGAATATTCGCTGCCG+AGG + chr2_4:2479992-2480011 Msa0308290:CDS 55.0%
GGTGGAATATTCGCTGCCGA+GGG + chr2_4:2479993-2480012 Msa0308290:CDS 55.0%
AAGTGGCGATGCAGACACCA+GGG - chr2_4:2480040-2480059 None:intergenic 55.0%
GAGATTAGTAGCACCTGGGC+CGG - chr2_4:2480063-2480082 None:intergenic 55.0%
CAGGTTCCCCGGAGAATGAT+TGG + chr2_4:2480140-2480159 Msa0308290:CDS 55.0%
!! GTTACCCAAGGCACCGAAAG+AGG + chr2_4:2480394-2480413 Msa0308290:CDS 55.0%
!! TGTGCCTCTTTCGGTGCCTT+GGG - chr2_4:2480401-2480420 None:intergenic 55.0%
!! ATGTGCCTCTTTCGGTGCCT+TGG - chr2_4:2480402-2480421 None:intergenic 55.0%
! GGCACCGAAAGAGGCACATT+TGG + chr2_4:2480403-2480422 Msa0308290:CDS 55.0%
TCGGGTTACTGGGAAGCTTG+AGG + chr2_4:2480685-2480704 Msa0308290:CDS 55.0%
! AGCTTGAGGCTTTTGCGAGC+CGG + chr2_4:2480699-2480718 Msa0308290:CDS 55.0%
!! CAGCCTCATGTGTCGGTTTG+TGG + chr2_4:2480773-2480792 Msa0308290:CDS 55.0%
!! GCCTCATGTGTCGGTTTGTG+GGG + chr2_4:2480775-2480794 Msa0308290:CDS 55.0%
TCCCCACAAACCGACACATG+AGG - chr2_4:2480779-2480798 None:intergenic 55.0%
TGACGAGCTTACCAATGGGG+AGG + chr2_4:2480970-2480989 Msa0308290:CDS 55.0%
GCAGAAGTCAACCACTGCCT+CGG - chr2_4:2481061-2481080 None:intergenic 55.0%
! AGGCAGTGGTTGACTTCTGC+TGG + chr2_4:2481061-2481080 Msa0308290:CDS 55.0%
!! TTCTGCTGGTCTTGGCGCTA+TGG + chr2_4:2481075-2481094 Msa0308290:CDS 55.0%
!! TCTGCTGGTCTTGGCGCTAT+GGG + chr2_4:2481076-2481095 Msa0308290:CDS 55.0%
GGTCTTGGCGCTATGGGATT+TGG + chr2_4:2481082-2481101 Msa0308290:CDS 55.0%
! ATTTGGATTGCCGGCTGCCA+TGG + chr2_4:2481099-2481118 Msa0308290:CDS 55.0%
! TTTGGATTGCCGGCTGCCAT+GGG + chr2_4:2481100-2481119 Msa0308290:CDS 55.0%
ATTGGCAACAGCAGCTCCCA+TGG - chr2_4:2481119-2481138 None:intergenic 55.0%
TGCCAATCCCGACGCTATTG+TGG + chr2_4:2481132-2481151 Msa0308290:CDS 55.0%
TGGTTGTCCAGTGGGAGGAT+CGG + chr2_4:2481266-2481285 Msa0308290:CDS 55.0%
CTCTTTGTCACACGAGCTGC+CGG - chr2_4:2481391-2481410 None:intergenic 55.0%
GGCAGCTCGTGTGACAAAGA+GGG + chr2_4:2481390-2481409 Msa0308290:CDS 55.0%
ATCAAGAAGGTAGGGGCCAG+GGG - chr2_4:2481452-2481471 None:intergenic 55.0%
CATCAAGAAGGTAGGGGCCA+GGG - chr2_4:2481453-2481472 None:intergenic 55.0%
ACATCAAGAAGGTAGGGGCC+AGG - chr2_4:2481454-2481473 None:intergenic 55.0%
! TCATAACCGAGGGTGATGGC+AGG + chr2_4:2481536-2481555 Msa0308290:CDS 55.0%
! GAACGCGGTTTTTGCAGCAG+TGG - chr2_4:2479613-2479632 None:intergenic 55.0%
!! GAAGGGAGTGTTTGGGGAAG+TGG - chr2_4:2479712-2479731 None:intergenic 55.0%
GAGCGGTGGTTGAGCTTGAA+GGG - chr2_4:2479729-2479748 None:intergenic 55.0%
AGAGCGGTGGTTGAGCTTGA+AGG - chr2_4:2479730-2479749 None:intergenic 55.0%
!! CGGAGATTTTGAGAGAGCGG+TGG - chr2_4:2479743-2479762 None:intergenic 55.0%
GAATTGTTGAGGTGGGGGGA+TGG - chr2_4:2479799-2479818 None:intergenic 55.0%
GGGTTCGTTAGGGGCAAATC+GGG - chr2_4:2479826-2479845 None:intergenic 55.0%
GGGGTTCGTTAGGGGCAAAT+CGG - chr2_4:2479827-2479846 None:intergenic 55.0%
!! GCCTTTTCGGGGTTCGTTAG+GGG - chr2_4:2479835-2479854 None:intergenic 55.0%
!! CGCCTTTTCGGGGTTCGTTA+GGG - chr2_4:2479836-2479855 None:intergenic 55.0%
! GTCGAAGCACTCGAACGTCA+GGG + chr2_4:2479867-2479886 Msa0308290:CDS 55.0%
!! TTTCCATTGAAGCGCCGCCA+GGG - chr2_4:2479914-2479933 None:intergenic 55.0%
!! ATTTCCATTGAAGCGCCGCC+AGG - chr2_4:2479915-2479934 None:intergenic 55.0%
AGGGAGGACGTTACGAATGG+CGG - chr2_4:2479961-2479980 None:intergenic 55.0%
ACGAGGGAGGACGTTACGAA+TGG - chr2_4:2479964-2479983 None:intergenic 55.0%
AGGTGGAATATTCGCTGCCG+AGG + chr2_4:2479992-2480011 Msa0308290:CDS 55.0%
GGTGGAATATTCGCTGCCGA+GGG + chr2_4:2479993-2480012 Msa0308290:CDS 55.0%
AAGTGGCGATGCAGACACCA+GGG - chr2_4:2480040-2480059 None:intergenic 55.0%
GAGATTAGTAGCACCTGGGC+CGG - chr2_4:2480063-2480082 None:intergenic 55.0%
CAGGTTCCCCGGAGAATGAT+TGG + chr2_4:2480140-2480159 Msa0308290:CDS 55.0%
!! GTTACCCAAGGCACCGAAAG+AGG + chr2_4:2480394-2480413 Msa0308290:CDS 55.0%
!! TGTGCCTCTTTCGGTGCCTT+GGG - chr2_4:2480401-2480420 None:intergenic 55.0%
!! ATGTGCCTCTTTCGGTGCCT+TGG - chr2_4:2480402-2480421 None:intergenic 55.0%
! GGCACCGAAAGAGGCACATT+TGG + chr2_4:2480403-2480422 Msa0308290:CDS 55.0%
TCGGGTTACTGGGAAGCTTG+AGG + chr2_4:2480685-2480704 Msa0308290:CDS 55.0%
! AGCTTGAGGCTTTTGCGAGC+CGG + chr2_4:2480699-2480718 Msa0308290:CDS 55.0%
!! CAGCCTCATGTGTCGGTTTG+TGG + chr2_4:2480773-2480792 Msa0308290:CDS 55.0%
!! GCCTCATGTGTCGGTTTGTG+GGG + chr2_4:2480775-2480794 Msa0308290:CDS 55.0%
TCCCCACAAACCGACACATG+AGG - chr2_4:2480779-2480798 None:intergenic 55.0%
TGACGAGCTTACCAATGGGG+AGG + chr2_4:2480970-2480989 Msa0308290:CDS 55.0%
GCAGAAGTCAACCACTGCCT+CGG - chr2_4:2481061-2481080 None:intergenic 55.0%
! AGGCAGTGGTTGACTTCTGC+TGG + chr2_4:2481061-2481080 Msa0308290:CDS 55.0%
!! TTCTGCTGGTCTTGGCGCTA+TGG + chr2_4:2481075-2481094 Msa0308290:CDS 55.0%
!! TCTGCTGGTCTTGGCGCTAT+GGG + chr2_4:2481076-2481095 Msa0308290:CDS 55.0%
GGTCTTGGCGCTATGGGATT+TGG + chr2_4:2481082-2481101 Msa0308290:CDS 55.0%
! ATTTGGATTGCCGGCTGCCA+TGG + chr2_4:2481099-2481118 Msa0308290:CDS 55.0%
! TTTGGATTGCCGGCTGCCAT+GGG + chr2_4:2481100-2481119 Msa0308290:CDS 55.0%
ATTGGCAACAGCAGCTCCCA+TGG - chr2_4:2481119-2481138 None:intergenic 55.0%
TGCCAATCCCGACGCTATTG+TGG + chr2_4:2481132-2481151 Msa0308290:CDS 55.0%
TGGTTGTCCAGTGGGAGGAT+CGG + chr2_4:2481266-2481285 Msa0308290:CDS 55.0%
CTCTTTGTCACACGAGCTGC+CGG - chr2_4:2481391-2481410 None:intergenic 55.0%
GGCAGCTCGTGTGACAAAGA+GGG + chr2_4:2481390-2481409 Msa0308290:CDS 55.0%
ATCAAGAAGGTAGGGGCCAG+GGG - chr2_4:2481452-2481471 None:intergenic 55.0%
CATCAAGAAGGTAGGGGCCA+GGG - chr2_4:2481453-2481472 None:intergenic 55.0%
ACATCAAGAAGGTAGGGGCC+AGG - chr2_4:2481454-2481473 None:intergenic 55.0%
! TCATAACCGAGGGTGATGGC+AGG + chr2_4:2481536-2481555 Msa0308290:CDS 55.0%
GCCCCTAACGAACCCCGAAA+AGG + chr2_4:2479831-2479850 Msa0308290:CDS 60.0%
!! GCGCCTTTTCGGGGTTCGTT+AGG - chr2_4:2479837-2479856 None:intergenic 60.0%
GACGTTCGAGTGCTTCGACG+AGG - chr2_4:2479866-2479885 None:intergenic 60.0%
! CGTCGAAGCACTCGAACGTC+AGG + chr2_4:2479866-2479885 Msa0308290:CDS 60.0%
TTACCCTGGCGGCGCTTCAA+TGG + chr2_4:2479908-2479927 Msa0308290:CDS 60.0%
GAGGACGTTACGAATGGCGG+TGG - chr2_4:2479958-2479977 None:intergenic 60.0%
GTCCTCCCTCGTCACGAACA+AGG + chr2_4:2479972-2479991 Msa0308290:CDS 60.0%
CACCTTGTTCGTGACGAGGG+AGG - chr2_4:2479977-2479996 None:intergenic 60.0%
CTCCCTCGTCACGAACAAGG+TGG + chr2_4:2479975-2479994 Msa0308290:CDS 60.0%
GGAGGAACGAGCGTAACCCT+CGG - chr2_4:2480012-2480031 None:intergenic 60.0%
GAGGGTTACGCTCGTTCCTC+CGG + chr2_4:2480011-2480030 Msa0308290:CDS 60.0%
GATGCAGACACCAGGGAGAC+CGG - chr2_4:2480033-2480052 None:intergenic 60.0%
GAAGTGGCGATGCAGACACC+AGG - chr2_4:2480041-2480060 None:intergenic 60.0%
GGTGTCTGCATCGCCACTTC+CGG + chr2_4:2480041-2480060 Msa0308290:CDS 60.0%
CATTCTCCGGGGAACCTGAC+CGG - chr2_4:2480138-2480157 None:intergenic 60.0%
! GCTTGAGGCTTTTGCGAGCC+GGG + chr2_4:2480700-2480719 Msa0308290:CDS 60.0%
GGTACAAGAGACCGAGGCAG+TGG + chr2_4:2481047-2481066 Msa0308290:CDS 60.0%
GGGTATGGTTGTCCAGTGGG+AGG + chr2_4:2481261-2481280 Msa0308290:CDS 60.0%
ATTGGCTGGGTCTCCCAGGT+AGG - chr2_4:2481317-2481336 None:intergenic 60.0%
! TCTCATTGGCTGGGTCTCCC+AGG - chr2_4:2481321-2481340 None:intergenic 60.0%
CGGCAGCTCGTGTGACAAAG+AGG + chr2_4:2481389-2481408 Msa0308290:CDS 60.0%
GCCCCTAACGAACCCCGAAA+AGG + chr2_4:2479831-2479850 Msa0308290:CDS 60.0%
!! GCGCCTTTTCGGGGTTCGTT+AGG - chr2_4:2479837-2479856 None:intergenic 60.0%
GACGTTCGAGTGCTTCGACG+AGG - chr2_4:2479866-2479885 None:intergenic 60.0%
! CGTCGAAGCACTCGAACGTC+AGG + chr2_4:2479866-2479885 Msa0308290:CDS 60.0%
TTACCCTGGCGGCGCTTCAA+TGG + chr2_4:2479908-2479927 Msa0308290:CDS 60.0%
GAGGACGTTACGAATGGCGG+TGG - chr2_4:2479958-2479977 None:intergenic 60.0%
GTCCTCCCTCGTCACGAACA+AGG + chr2_4:2479972-2479991 Msa0308290:CDS 60.0%
CACCTTGTTCGTGACGAGGG+AGG - chr2_4:2479977-2479996 None:intergenic 60.0%
CTCCCTCGTCACGAACAAGG+TGG + chr2_4:2479975-2479994 Msa0308290:CDS 60.0%
GGAGGAACGAGCGTAACCCT+CGG - chr2_4:2480012-2480031 None:intergenic 60.0%
GAGGGTTACGCTCGTTCCTC+CGG + chr2_4:2480011-2480030 Msa0308290:CDS 60.0%
GATGCAGACACCAGGGAGAC+CGG - chr2_4:2480033-2480052 None:intergenic 60.0%
GAAGTGGCGATGCAGACACC+AGG - chr2_4:2480041-2480060 None:intergenic 60.0%
GGTGTCTGCATCGCCACTTC+CGG + chr2_4:2480041-2480060 Msa0308290:CDS 60.0%
CATTCTCCGGGGAACCTGAC+CGG - chr2_4:2480138-2480157 None:intergenic 60.0%
! GCTTGAGGCTTTTGCGAGCC+GGG + chr2_4:2480700-2480719 Msa0308290:CDS 60.0%
GGTACAAGAGACCGAGGCAG+TGG + chr2_4:2481047-2481066 Msa0308290:CDS 60.0%
GGGTATGGTTGTCCAGTGGG+AGG + chr2_4:2481261-2481280 Msa0308290:CDS 60.0%
ATTGGCTGGGTCTCCCAGGT+AGG - chr2_4:2481317-2481336 None:intergenic 60.0%
! TCTCATTGGCTGGGTCTCCC+AGG - chr2_4:2481321-2481340 None:intergenic 60.0%
CGGCAGCTCGTGTGACAAAG+AGG + chr2_4:2481389-2481408 Msa0308290:CDS 60.0%
TTGAGGTGGGGGGATGGGAG+TGG - chr2_4:2479793-2479812 None:intergenic 65.0%
AGTAGCACCTGGGCCGGAAG+TGG - chr2_4:2480057-2480076 None:intergenic 65.0%
CCATCACCGGTCAGGTTCCC+CGG + chr2_4:2480129-2480148 Msa0308290:CDS 65.0%
ACAGCAGCTCCCATGGCAGC+CGG - chr2_4:2481112-2481131 None:intergenic 65.0%
TTGAGGTGGGGGGATGGGAG+TGG - chr2_4:2479793-2479812 None:intergenic 65.0%
AGTAGCACCTGGGCCGGAAG+TGG - chr2_4:2480057-2480076 None:intergenic 65.0%
CCATCACCGGTCAGGTTCCC+CGG + chr2_4:2480129-2480148 Msa0308290:CDS 65.0%
ACAGCAGCTCCCATGGCAGC+CGG - chr2_4:2481112-2481131 None:intergenic 65.0%
GCTCGTTCCTCCGGTCTCCC+TGG + chr2_4:2480020-2480039 Msa0308290:CDS 70.0%
GCAGACACCAGGGAGACCGG+AGG - chr2_4:2480030-2480049 None:intergenic 70.0%
TGCATCGCCACTTCCGGCCC+AGG + chr2_4:2480047-2480066 Msa0308290:CDS 70.0%
CCGGGGAACCTGACCGGTGA+TGG - chr2_4:2480132-2480151 None:intergenic 70.0%
GCTCGTTCCTCCGGTCTCCC+TGG + chr2_4:2480020-2480039 Msa0308290:CDS 70.0%
GCAGACACCAGGGAGACCGG+AGG - chr2_4:2480030-2480049 None:intergenic 70.0%
TGCATCGCCACTTCCGGCCC+AGG + chr2_4:2480047-2480066 Msa0308290:CDS 70.0%
CCGGGGAACCTGACCGGTGA+TGG - chr2_4:2480132-2480151 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 2479603 2481570 2479603 ID=Msa0308290;Name=Msa0308290
chr2_4 mRNA 2479603 2481570 2479603 ID=Msa0308290-mRNA-1;Parent=Msa0308290;Name=Msa0308290-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|655
chr2_4 exon 2479603 2481570 2479603 ID=Msa0308290-mRNA-1:exon:603;Parent=Msa0308290-mRNA-1
chr2_4 CDS 2479603 2481570 2479603 ID=Msa0308290-mRNA-1:cds;Parent=Msa0308290-mRNA-1
Gene Sequence

>Msa0308290

ATGGCAGCCACTGCTGCAAAAACCGCGTTCACAACCACCATCTCTTCATCTTCACCACAATCACTTCCAAACCAAAACCACGTTTTCAGAATCACTTACCCATTTTCCACTTCCCCAAACACTCCCTTCAAGCTCAACCACCGCTCTCTCAAAATCTCCGCTTCCATCTCCAACCCTACTCAAAAAACCACTCCCATCCCCCCACCTCAACAATTCATTTCCCGATTTGCCCCTAACGAACCCCGAAAAGGCGCAGATATCCTCGTCGAAGCACTCGAACGTCAGGGAGTTACAAATGTCTTCGCTTACCCTGGCGGCGCTTCAATGGAAATTCATCAAGCACTCACGCGCTCCACCGCCATTCGTAACGTCCTCCCTCGTCACGAACAAGGTGGAATATTCGCTGCCGAGGGTTACGCTCGTTCCTCCGGTCTCCCTGGTGTCTGCATCGCCACTTCCGGCCCAGGTGCTACTAATCTCGTCAGTGGACTTGCTGATGCTATGCTTGACAGTGTTCCTCTTATTGCCATCACCGGTCAGGTTCCCCGGAGAATGATTGGTACTGATGCTTTTCAAGAAACTCCGATTGTTGAGGTAACTAGATCAATCACCAAGCATAATTATCTTGTTCTTGATGTTGATGATATACCTAGGATAGTGAATGAAGCGTTTTTATTAGCTTCTAGTGGTAGACCTGGACCTGTTTTGATCGATATACCTAAGGATATTCAGCAACAGGTTTCTGTTCCGAATTGGGATCAACCTATTAGGTTAACTGGGTATATGAATAGGTTACCCAAGGCACCGAAAGAGGCACATTTGGAACAGATTGTGAGGTTGTTATTGGAGTCTAAGAAACCTGTTTTGTATGTTGGTGGTGGTAGTTTGAATTGTAGCGAGGAATTGAGGCGGTTTGTTGAGTTAACCGGTGTACCTGTTGCTAGTACTTTGATGGGGTTGGGTTCCTATCCTAGTTCGGATGAGAATTCGTTGCAGATGCTTGGGATGCATGGGACTGTTTATGCTAATTATGCGGTTGATAAGAGTGATCTTTTGCTTGCGTTTGGGGTTAGGTTTGATGATCGGGTTACTGGGAAGCTTGAGGCTTTTGCGAGCCGGGCGAAGATTGTTCATATTGATATTGATGCTGCTGAGATTGGGAAGAATAAGCAGCCTCATGTGTCGGTTTGTGGGGATTTGAAGTTGGCTTTGAAGGGGATCAATCGAATTTTGGAGAGTAATGGGATAGAGAGTAAGCTTGATTTCGGAGGTTGGAGAGAAGAACTGAATGATCAGAAAGTTAGGTTTCCGATGAGTTATAAGAAGTTTGATGAAGCTATTCCTCCGCAGTATGCTATACAGGTTCTTGACGAGCTTACCAATGGGGAGGCTATCATAAGTACTGGTGTTGGACAACATCAGATGTGGGCTGCTCAGTTTTATAGGTACAAGAGACCGAGGCAGTGGTTGACTTCTGCTGGTCTTGGCGCTATGGGATTTGGATTGCCGGCTGCCATGGGAGCTGCTGTTGCCAATCCCGACGCTATTGTGGTTGACATCGATGGTGATGGAAGCTTTATGATGAATGTTCAGGAGTTGGCTACTATCAAGGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAACAATCAACACTTGGGTATGGTTGTCCAGTGGGAGGATCGGTTCTATAAAGCCAATAGAGCTCACACCTACCTGGGAGACCCAGCCAATGAGAAAGAAATATTCCCCAATATGTTGAAGTTTGCAGGTGCTTGTGGTATACCGGCAGCTCGTGTGACAAAGAGGGCAGACCTTAGAGCAGCGATTCAGAAAATGTTAGATACCCCTGGCCCCTACCTTCTTGATGTCATTGTACCGCATCAAGAGCATGTGTTGCCAATGATTCCTGCAAATGGATCCTTTGAGGATGTCATAACCGAGGGTGATGGCAGGATAAGTTACTGA
Protein sequence

>Msa0308290

MAATAAKTAFTTTISSSSPQSLPNQNHVFRITYPFSTSPNTPFKLNHRSLKISASISNPTQKTTPIPPPQQFISRFAPNEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSTAIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADAMLDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVNEAFLLASSGRPGPVLIDIPKDIQQQVSVPNWDQPIRLTGYMNRLPKAPKEAHLEQIVRLLLESKKPVLYVGGGSLNCSEELRRFVELTGVPVASTLMGLGSYPSSDENSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDAAEIGKNKQPHVSVCGDLKLALKGINRILESNGIESKLDFGGWREELNDQKVRFPMSYKKFDEAIPPQYAIQVLDELTNGEAIISTGVGQHQMWAAQFYRYKRPRQWLTSAGLGAMGFGLPAAMGAAVANPDAIVVDIDGDGSFMMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEKEIFPNMLKFAGACGIPAARVTKRADLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPANGSFEDVITEGDGRISY*