AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1087870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087870 MtrunA17_Chr2g0281881 98.015 655 13 0 1 655 1 655 0.0 1328
Msa1087870 MtrunA17_Chr3g0132201 80.892 628 114 3 31 655 27 651 0.0 1067
Msa1087870 MtrunA17_Chr2g0290681 73.520 608 156 2 27 633 10 613 0.0 946
Msa1087870 MtrunA17_Chr6g0449041 24.644 491 330 11 84 550 6 480 5.96e-35 140
Msa1087870 MtrunA17_Chr5g0420011 22.325 542 377 17 52 574 19 535 1.69e-15 80.1
Msa1087870 MtrunA17_Chr4g0007071 22.202 545 374 17 52 574 19 535 1.88e-15 80.1
Msa1087870 MtrunA17_Chr2g0283471 21.942 515 340 17 88 572 26 508 4.87e-14 75.5
Msa1087870 MtrunA17_Chr7g0242961 22.656 512 344 16 88 574 47 531 3.92e-13 72.4
Msa1087870 MtrunA17_Chr7g0242981 23.034 534 345 18 63 574 28 517 4.81e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1087870 AT3G48560.1 83.788 586 95 0 70 655 85 670 0.0 1046
Msa1087870 AT5G17380.1 27.328 494 309 12 84 550 14 484 8.58e-47 174
Msa1087870 AT5G01330.1 24.237 524 321 17 88 574 36 520 8.05e-20 94.4
Msa1087870 AT5G01320.1 22.562 523 331 15 88 574 47 531 1.23e-17 87.4
Msa1087870 AT4G33070.1 22.328 524 331 15 88 574 51 535 1.95e-16 83.6
Msa1087870 AT5G54960.1 21.782 505 353 14 88 572 51 533 1.29e-15 80.9

Find 215 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGGGGATCAATCGAATTT+TGG 0.232600 7_3:+641390 Msa1087870:CDS
CCCAATATGTTGAAGTTTGC+AGG 0.240705 7_3:+641928 Msa1087870:CDS
GATCAACCTATTAGGTTAAC+TGG 0.252439 7_3:+640935 Msa1087870:CDS
AATATTTCTTTCTCATTGGC+TGG 0.252481 7_3:-641904 None:intergenic
TTGAGCTTGAAGGGAGTGTT+TGG 0.263351 7_3:-640293 None:intergenic
TTCAACAACAATATCTTAAC+AGG 0.266547 7_3:-641802 None:intergenic
GTGTTTGGGGAAGTGGAAAA+TGG 0.269439 7_3:-640278 None:intergenic
CGCTATGGGATTTGGATTGC+CGG 0.275397 7_3:+641666 Msa1087870:CDS
ACCTGCAAACTTCAACATAT+TGG 0.275568 7_3:-641929 None:intergenic
CGAATTGGGATCAACCTATT+AGG 0.276452 7_3:+640927 Msa1087870:CDS
ACAGATTGTGAGGTTGTTAT+TGG 0.278604 7_3:+641003 Msa1087870:CDS
GGTCTTGGCGCTATGGGATT+TGG 0.283365 7_3:+641658 Msa1087870:CDS
AGGTTTGATGATCGGGTTAC+TGG 0.289362 7_3:+641250 Msa1087870:CDS
CCTGCAAACTTCAACATATT+GGG 0.314608 7_3:-641928 None:intergenic
CAGGTAGGTGTGAGCTCTAT+TGG 0.318135 7_3:-641875 None:intergenic
TGCTAGTACTTTGATGGGGT+TGG 0.322703 7_3:+641117 Msa1087870:CDS
AACAGGTTTCTGTTCCGAAT+TGG 0.337313 7_3:+640912 Msa1087870:CDS
TGTTCCAAATGTGCCTCTTT+CGG 0.341709 7_3:-640983 None:intergenic
ATATACCCAGTTAACCTAAT+AGG 0.345011 7_3:-640941 None:intergenic
ATTTGGATTGCCGGCTGCCA+TGG 0.358680 7_3:+641675 Msa1087870:CDS
GGGGAATATTTCTTTCTCAT+TGG 0.363131 7_3:-641908 None:intergenic
GGCACCGAAAGAGGCACATT+TGG 0.369187 7_3:+640979 Msa1087870:CDS
GATCCATTTGCAGGAATCAT+TGG 0.370032 7_3:-642078 None:intergenic
TGAGCTTGAAGGGAGTGTTT+GGG 0.371196 7_3:-640292 None:intergenic
TGATTCTGAAAACGTGGTTT+TGG 0.372112 7_3:-640250 None:intergenic
GGATTTGAAGTTGGCTTTGA+AGG 0.374802 7_3:+641372 Msa1087870:CDS
ACCTGTTGCTAGTACTTTGA+TGG 0.375227 7_3:+641111 Msa1087870:CDS
GAAGGGAGTGTTTGGGGAAG+TGG 0.375779 7_3:-640285 None:intergenic
CAGCCTCATGTGTCGGTTTG+TGG 0.375821 7_3:+641349 Msa1087870:CDS
AAGCTTTATGATGAATGTTC+AGG 0.379274 7_3:+641750 Msa1087870:CDS
ACAGGTTTCTGTTCCGAATT+GGG 0.386257 7_3:+640913 Msa1087870:CDS
TCCTCAAAGGATCCATTTGC+AGG 0.389166 7_3:-642087 None:intergenic
ATGTGCCTCTTTCGGTGCCT+TGG 0.389362 7_3:-640975 None:intergenic
ACCTAAGGATATTCAGCAAC+AGG 0.392227 7_3:+640895 Msa1087870:CDS
GGTTAACTGGGTATATGAAT+AGG 0.392870 7_3:+640948 Msa1087870:CDS
TTCTGCTGGTCTTGGCGCTA+TGG 0.393331 7_3:+641651 Msa1087870:CDS
ACAGCAGCTCCCATGGCAGC+CGG 0.395329 7_3:-641685 None:intergenic
GATATTGATGCTGCTGAGAT+TGG 0.396931 7_3:+641316 Msa1087870:CDS
TGGGGTTAGGTTTGATGATC+GGG 0.402613 7_3:+641243 Msa1087870:CDS
GGTGTCTGCATCGCCACTTC+CGG 0.403895 7_3:+640617 Msa1087870:CDS
CGTCGAAGCACTCGAACGTC+AGG 0.404386 7_3:+640442 Msa1087870:CDS
GGGTTCGTTAGGGGCAAATC+GGG 0.405793 7_3:-640399 None:intergenic
GCTAGTACTTTGATGGGGTT+GGG 0.408704 7_3:+641118 Msa1087870:CDS
TGGTTGACTTCTGCTGGTCT+TGG 0.411154 7_3:+641643 Msa1087870:CDS
ATAGAGAGTAAGCTTGATTT+CGG 0.412100 7_3:+641424 Msa1087870:CDS
GAGAATTCGTTGCAGATGCT+TGG 0.413491 7_3:+641160 Msa1087870:CDS
AACTGAATGATCAGAAAGTT+AGG 0.416856 7_3:+641461 Msa1087870:CDS
AGCCTCATGTGTCGGTTTGT+GGG 0.418936 7_3:+641350 Msa1087870:CDS
TTGGGGTTAGGTTTGATGAT+CGG 0.419793 7_3:+641242 Msa1087870:CDS
TGTGCCTCTTTCGGTGCCTT+GGG 0.420636 7_3:-640974 None:intergenic
AGGCGGTTTGTTGAGTTAAC+CGG 0.420654 7_3:+641085 Msa1087870:CDS
GGGGTTCGTTAGGGGCAAAT+CGG 0.423916 7_3:-640400 None:intergenic
TCCTCCGCAGTATGCTATAC+AGG 0.426227 7_3:+641519 Msa1087870:CDS
TGCATCGCCACTTCCGGCCC+AGG 0.426512 7_3:+640623 Msa1087870:CDS
ATTTCCATTGAAGCGCCGCC+AGG 0.431656 7_3:-640488 None:intergenic
CCATCACCGGTCAGGTTCCC+CGG 0.439113 7_3:+640705 Msa1087870:CDS
TCTTATTGCCATCACCGGTC+AGG 0.440205 7_3:+640697 Msa1087870:CDS
TCTGCTGGTCTTGGCGCTAT+GGG 0.442287 7_3:+641652 Msa1087870:CDS
GCTCGTTCCTCCGGTCTCCC+TGG 0.442490 7_3:+640596 Msa1087870:CDS
CAATAGAGCTCACACCTACC+TGG 0.446335 7_3:+641876 Msa1087870:CDS
TTTGGATTGCCGGCTGCCAT+GGG 0.447144 7_3:+641676 Msa1087870:CDS
GATTTGAAGTTGGCTTTGAA+GGG 0.448952 7_3:+641373 Msa1087870:CDS
TCTCATTGGCTGGGTCTCCC+AGG 0.453592 7_3:-641894 None:intergenic
CCTGTTGCTAGTACTTTGAT+GGG 0.454512 7_3:+641112 Msa1087870:CDS
GTTGGGTTCCTATCCTAGTT+CGG 0.456275 7_3:+641135 Msa1087870:CDS
TGTTTGGGGAAGTGGAAAAT+GGG 0.456756 7_3:-640277 None:intergenic
TGCAGGTGCTTGTGGTATAC+CGG 0.457670 7_3:+641945 Msa1087870:CDS
CATCAAGAAGGTAGGGGCCA+GGG 0.457929 7_3:-642026 None:intergenic
ACATCAAGAAGGTAGGGGCC+AGG 0.461753 7_3:-642027 None:intergenic
CATCAGTACCAATCATTCTC+CGG 0.464538 7_3:-640724 None:intergenic
TATGATGAATGTTCAGGAGT+TGG 0.465434 7_3:+641756 Msa1087870:CDS
CAGGTTCCCCGGAGAATGAT+TGG 0.466447 7_3:+640716 Msa1087870:CDS
ATCAGTACCAATCATTCTCC+GGG 0.467400 7_3:-640723 None:intergenic
CCGGGGAACCTGACCGGTGA+TGG 0.468521 7_3:-640705 None:intergenic
TTAGGTATATCGATCAAAAC+AGG 0.472536 7_3:-640878 None:intergenic
AGTAGGGTTGGAGATGGAAG+CGG 0.473325 7_3:-640336 None:intergenic
TTGCAGATGCTTGGGATGCA+TGG 0.475365 7_3:+641169 Msa1087870:CDS
CCCATCAAAGTACTAGCAAC+AGG 0.475566 7_3:-641112 None:intergenic
TTACCCTGGCGGCGCTTCAA+TGG 0.476078 7_3:+640484 Msa1087870:CDS
AACCACAATAGCGTCGGGAT+TGG 0.482109 7_3:-641710 None:intergenic
GTAAGCTTGATTTCGGAGGT+TGG 0.484920 7_3:+641431 Msa1087870:CDS
AGGCAGTGGTTGACTTCTGC+TGG 0.485926 7_3:+641637 Msa1087870:CDS
CTAATAGGTTGATCCCAATT+CGG 0.489964 7_3:-640926 None:intergenic
TTCTTGACGAGCTTACCAAT+GGG 0.490237 7_3:+641542 Msa1087870:CDS
TTGCCAATGATTCCTGCAAA+TGG 0.490698 7_3:+642075 Msa1087870:CDS
GATGCAGACACCAGGGAGAC+CGG 0.491267 7_3:-640606 None:intergenic
ATATTTCTTTCTCATTGGCT+GGG 0.491931 7_3:-641903 None:intergenic
GAGGGTTACGCTCGTTCCTC+CGG 0.496778 7_3:+640587 Msa1087870:CDS
CTCTTTGTCACACGAGCTGC+CGG 0.502154 7_3:-641964 None:intergenic
CCACCACCAACATACAAAAC+AGG 0.502296 7_3:-641037 None:intergenic
AGTAGCACCTGGGCCGGAAG+TGG 0.502445 7_3:-640630 None:intergenic
TCCTGCAAATGGATCCTTTG+AGG 0.504950 7_3:+642086 Msa1087870:CDS
AGAATTCGTTGCAGATGCTT+GGG 0.506752 7_3:+641161 Msa1087870:CDS
GAAGTGGCGATGCAGACACC+AGG 0.511122 7_3:-640614 None:intergenic
AGAGCGGTGGTTGAGCTTGA+AGG 0.511308 7_3:-640303 None:intergenic
GGTTTGTGGGGATTTGAAGT+TGG 0.511799 7_3:+641363 Msa1087870:CDS
ACCTGTTGCTGAATATCCTT+AGG 0.511983 7_3:-640896 None:intergenic
TGACCGGTGATGGCAATAAG+AGG 0.515800 7_3:-640695 None:intergenic
GCCCCTAACGAACCCCGAAA+AGG 0.516458 7_3:+640407 Msa1087870:CDS
GATCTAGTTACCTCAACAAT+CGG 0.519783 7_3:-640761 None:intergenic
TGAATTGTAGCGAGGAATTG+AGG 0.520671 7_3:+641065 Msa1087870:CDS
TCAAACTTCTTATAACTCAT+CGG 0.521295 7_3:-641487 None:intergenic
ATATTGATGCTGCTGAGATT+GGG 0.522267 7_3:+641317 Msa1087870:CDS
ATTGGCAACAGCAGCTCCCA+TGG 0.524757 7_3:-641692 None:intergenic
TCAGGAGTTGGCTACTATCA+AGG 0.529463 7_3:+641768 Msa1087870:CDS
CATTCTCCGGGGAACCTGAC+CGG 0.531322 7_3:-640711 None:intergenic
GTTCTTGACGAGCTTACCAA+TGG 0.533777 7_3:+641541 Msa1087870:CDS
GGGGAGGCTATCATAAGTAC+TGG 0.534253 7_3:+641562 Msa1087870:CDS
GCCTCATGTGTCGGTTTGTG+GGG 0.534297 7_3:+641351 Msa1087870:CDS
AACGCTTCATTCACTATCCT+AGG 0.535019 7_3:-640827 None:intergenic
GGGAAATGAATTGTTGAGGT+GGG 0.536278 7_3:-640379 None:intergenic
GAGCGGTGGTTGAGCTTGAA+GGG 0.536459 7_3:-640302 None:intergenic
CTGACGAGATTAGTAGCACC+TGG 0.538331 7_3:-640641 None:intergenic
ATTGGCTGGGTCTCCCAGGT+AGG 0.539147 7_3:-641890 None:intergenic
TTGAAGTTTGCAGGTGCTTG+TGG 0.539914 7_3:+641937 Msa1087870:CDS
ACAAATGTCTTCGCTTACCC+TGG 0.542915 7_3:+640470 Msa1087870:CDS
ATCAAGAAGGTAGGGGCCAG+GGG 0.543925 7_3:-642025 None:intergenic
ACAATGACATCAAGAAGGTA+GGG 0.544765 7_3:-642033 None:intergenic
ATATCGATCAAAACAGGTCC+AGG 0.546128 7_3:-640872 None:intergenic
TCAAGAAACTCCGATTGTTG+AGG 0.547823 7_3:+640751 Msa1087870:CDS
CTTGGGTATGGTTGTCCAGT+GGG 0.549540 7_3:+641834 Msa1087870:CDS
GTTGTTGAACAATCAACACT+TGG 0.549760 7_3:+641816 Msa1087870:CDS
GTTACCCAAGGCACCGAAAG+AGG 0.549898 7_3:+640970 Msa1087870:CDS
GAAATGAATTGTTGAGGTGG+GGG 0.552213 7_3:-640377 None:intergenic
ATGTCAACCACAATAGCGTC+GGG 0.553806 7_3:-641715 None:intergenic
GTTCCTCTTATTGCCATCAC+CGG 0.554774 7_3:+640692 Msa1087870:CDS
ATTCTCATCCGAACTAGGAT+AGG 0.554840 7_3:-641143 None:intergenic
CACATTTGGAACAGATTGTG+AGG 0.555893 7_3:+640993 Msa1087870:CDS
AACGAATTCTCATCCGAACT+AGG 0.556901 7_3:-641148 None:intergenic
GAGATTAGTAGCACCTGGGC+CGG 0.558857 7_3:-640636 None:intergenic
AAGAACAAGATAATTATGCT+TGG 0.559558 7_3:-640789 None:intergenic
GGTACAAGAGACCGAGGCAG+TGG 0.562380 7_3:+641623 Msa1087870:CDS
TGCAGATGCTTGGGATGCAT+GGG 0.563717 7_3:+641170 Msa1087870:CDS
AAATGAATTGTTGAGGTGGG+GGG 0.565609 7_3:-640376 None:intergenic
GAGGACGTTACGAATGGCGG+TGG 0.567894 7_3:-640531 None:intergenic
GCAGAAGTCAACCACTGCCT+CGG 0.568184 7_3:-641634 None:intergenic
CAGAAAATGTTAGATACCCC+TGG 0.568513 7_3:+642009 Msa1087870:CDS
ATTTGAAGTTGGCTTTGAAG+GGG 0.570043 7_3:+641374 Msa1087870:CDS
CAATATGAACAATCTTCGCC+CGG 0.571633 7_3:-641294 None:intergenic
ACTTATCCTGCCATCACCCT+CGG 0.572531 7_3:-642118 None:intergenic
GGAAATGAATTGTTGAGGTG+GGG 0.573854 7_3:-640378 None:intergenic
TACAATGACATCAAGAAGGT+AGG 0.574462 7_3:-642034 None:intergenic
TCATAACCGAGGGTGATGGC+AGG 0.574956 7_3:+642112 Msa1087870:CDS
TGGTTGTCCAGTGGGAGGAT+CGG 0.577376 7_3:+641842 Msa1087870:CDS
GAGCTTGAAGGGAGTGTTTG+GGG 0.580053 7_3:-640291 None:intergenic
GAACAATCAACACTTGGGTA+TGG 0.580544 7_3:+641822 Msa1087870:CDS
TATAGAACCGATCCTCCCAC+TGG 0.583559 7_3:-641849 None:intergenic
TTAGCTTCTAGTGGTAGACC+TGG 0.583844 7_3:+640854 Msa1087870:CDS
CTCGGTTATGACATCCTCAA+AGG 0.584779 7_3:-642100 None:intergenic
GGGTATGGTTGTCCAGTGGG+AGG 0.585047 7_3:+641837 Msa1087870:CDS
CGGCAGCTCGTGTGACAAAG+AGG 0.586144 7_3:+641965 Msa1087870:CDS
CGGGAAATGAATTGTTGAGG+TGG 0.587217 7_3:-640380 None:intergenic
AGGTGGAATATTCGCTGCCG+AGG 0.587958 7_3:+640568 Msa1087870:CDS
TTCCACCTTGTTCGTGACGA+GGG 0.588122 7_3:-640553 None:intergenic
GGTTTGATGATCGGGTTACT+GGG 0.588175 7_3:+641251 Msa1087870:CDS
GAGAGTAAGCTTGATTTCGG+AGG 0.590245 7_3:+641427 Msa1087870:CDS
TTGTTGAACAATCAACACTT+GGG 0.590968 7_3:+641817 Msa1087870:CDS
GCTATCATAAGTACTGGTGT+TGG 0.593538 7_3:+641568 Msa1087870:CDS
ATCAACCTATTAGGTTAACT+GGG 0.594575 7_3:+640936 Msa1087870:CDS
GTCCTCCCTCGTCACGAACA+AGG 0.595803 7_3:+640548 Msa1087870:CDS
GATGTCATAACCGAGGGTGA+TGG 0.596424 7_3:+642108 Msa1087870:CDS
CTGCAAACTTCAACATATTG+GGG 0.597132 7_3:-641927 None:intergenic
TGCCAATCCCGACGCTATTG+TGG 0.597385 7_3:+641708 Msa1087870:CDS
ACTTATGATAGCCTCCCCAT+TGG 0.598564 7_3:-641557 None:intergenic
ATTCCACCTTGTTCGTGACG+AGG 0.598895 7_3:-640554 None:intergenic
AATAGAGCTCACACCTACCT+GGG 0.601839 7_3:+641877 Msa1087870:CDS
TCGGGTTACTGGGAAGCTTG+AGG 0.605782 7_3:+641261 Msa1087870:CDS
CTGTTGCTAGTACTTTGATG+GGG 0.606374 7_3:+641113 Msa1087870:CDS
GTGGTTGACATCGATGGTGA+TGG 0.607155 7_3:+641727 Msa1087870:CDS
GGCAGCTCGTGTGACAAAGA+GGG 0.609397 7_3:+641966 Msa1087870:CDS
GAATAAGCAGCCTCATGTGT+CGG 0.610801 7_3:+641342 Msa1087870:CDS
TTTCCATTGAAGCGCCGCCA+GGG 0.615322 7_3:-640487 None:intergenic
TTGATGTTGATGATATACCT+AGG 0.619737 7_3:+640810 Msa1087870:CDS
TTTGAGGATGTCATAACCGA+GGG 0.621237 7_3:+642102 Msa1087870:CDS
ACGAGGGAGGACGTTACGAA+TGG 0.622770 7_3:-640537 None:intergenic
GATGTCAACCACAATAGCGT+CGG 0.624097 7_3:-641716 None:intergenic
GGTGGAATATTCGCTGCCGA+GGG 0.624227 7_3:+640569 Msa1087870:CDS
GGAGGAACGAGCGTAACCCT+CGG 0.628310 7_3:-640585 None:intergenic
TGGTGAAGATGAAGAGATGG+TGG 0.629345 7_3:-640213 None:intergenic
TTGTGGTGAAGATGAAGAGA+TGG 0.630262 7_3:-640216 None:intergenic
CAATGACATCAAGAAGGTAG+GGG 0.631239 7_3:-642032 None:intergenic
GGCAACACATGCTCTTGATG+CGG 0.634193 7_3:-642057 None:intergenic
TGACGAGCTTACCAATGGGG+AGG 0.634568 7_3:+641546 Msa1087870:CDS
GACTGTTTATGCTAATTATG+CGG 0.636569 7_3:+641192 Msa1087870:CDS
GCAGACACCAGGGAGACCGG+AGG 0.638324 7_3:-640603 None:intergenic
CACCTTGTTCGTGACGAGGG+AGG 0.638696 7_3:-640550 None:intergenic
TTTATAGGTACAAGAGACCG+AGG 0.639559 7_3:+641617 Msa1087870:CDS
GTGTTGGACAACATCAGATG+TGG 0.643554 7_3:+641584 Msa1087870:CDS
TGGTAGTTTGAATTGTAGCG+AGG 0.644126 7_3:+641057 Msa1087870:CDS
AGTACTAGCAACAGGTACAC+CGG 0.645359 7_3:-641104 None:intergenic
GCGGTACAATGACATCAAGA+AGG 0.647744 7_3:-642038 None:intergenic
GCTATTGTGGTTGACATCGA+TGG 0.649650 7_3:+641721 Msa1087870:CDS
ACTTGGGTATGGTTGTCCAG+TGG 0.649969 7_3:+641833 Msa1087870:CDS
GTCGAAGCACTCGAACGTCA+GGG 0.650703 7_3:+640443 Msa1087870:CDS
GGTAAGTGATTCTGAAAACG+TGG 0.650896 7_3:-640256 None:intergenic
AGGGAGGACGTTACGAATGG+CGG 0.657905 7_3:-640534 None:intergenic
AATCGGGAAATGAATTGTTG+AGG 0.661173 7_3:-640383 None:intergenic
TCCCCACAAACCGACACATG+AGG 0.664573 7_3:-641352 None:intergenic
GGTGCTACTAATCTCGTCAG+TGG 0.668110 7_3:+640644 Msa1087870:CDS
ACCTGTATAGCATACTGCGG+AGG 0.674124 7_3:-641520 None:intergenic
AGAGATGGTGGTTGTGAACG+CGG 0.674476 7_3:-640201 None:intergenic
CTTTGAGGATGTCATAACCG+AGG 0.677141 7_3:+642101 Msa1087870:CDS
GTATATGAATAGGTTACCCA+AGG 0.677418 7_3:+640958 Msa1087870:CDS
TGTTGGACAACATCAGATGT+GGG 0.692591 7_3:+641585 Msa1087870:CDS
GACGTTCGAGTGCTTCGACG+AGG 0.694030 7_3:-640439 None:intergenic
AAGTGGCGATGCAGACACCA+GGG 0.695335 7_3:-640613 None:intergenic
AATGTCTTCGCTTACCCTGG+CGG 0.697805 7_3:+640473 Msa1087870:CDS
TCTTGACGAGCTTACCAATG+GGG 0.698334 7_3:+641543 Msa1087870:CDS
TCAACAACAATATCTTAACA+GGG 0.698879 7_3:-641801 None:intergenic
CTCCCTCGTCACGAACAAGG+TGG 0.705691 7_3:+640551 Msa1087870:CDS
TGACGAGATTAGTAGCACCT+GGG 0.711329 7_3:-640640 None:intergenic
GGAGTTGGCTACTATCAAGG+TGG 0.721822 7_3:+641771 Msa1087870:CDS
AGAACCTGTATAGCATACTG+CGG 0.744810 7_3:-641523 None:intergenic
TCAGTACCAATCATTCTCCG+GGG 0.748029 7_3:-640722 None:intergenic
ATTGTAGCGAGGAATTGAGG+CGG 0.749278 7_3:+641068 Msa1087870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGAACAAGATAATTATGCT+TGG - chr7_3:640792-640811 None:intergenic 25.0%
! TCAAACTTCTTATAACTCAT+CGG - chr7_3:641490-641509 None:intergenic 25.0%
! TCAACAACAATATCTTAACA+GGG - chr7_3:641804-641823 None:intergenic 25.0%
! TTCAACAACAATATCTTAAC+AGG - chr7_3:641805-641824 None:intergenic 25.0%
! AAGAACAAGATAATTATGCT+TGG - chr7_3:640792-640811 None:intergenic 25.0%
! TCAAACTTCTTATAACTCAT+CGG - chr7_3:641490-641509 None:intergenic 25.0%
! TCAACAACAATATCTTAACA+GGG - chr7_3:641804-641823 None:intergenic 25.0%
! TTCAACAACAATATCTTAAC+AGG - chr7_3:641805-641824 None:intergenic 25.0%
!! TTGATGTTGATGATATACCT+AGG + chr7_3:640810-640829 Msa1087870:CDS 30.0%
TTAGGTATATCGATCAAAAC+AGG - chr7_3:640881-640900 None:intergenic 30.0%
!!! TGTTTTGATCGATATACCTA+AGG + chr7_3:640880-640899 Msa1087870:CDS 30.0%
ATCAACCTATTAGGTTAACT+GGG + chr7_3:640936-640955 Msa1087870:CDS 30.0%
ATATACCCAGTTAACCTAAT+AGG - chr7_3:640944-640963 None:intergenic 30.0%
! AAGAAACCTGTTTTGTATGT+TGG + chr7_3:641031-641050 Msa1087870:CDS 30.0%
GACTGTTTATGCTAATTATG+CGG + chr7_3:641192-641211 Msa1087870:CDS 30.0%
!! AATCGAATTTTGGAGAGTAA+TGG + chr7_3:641400-641419 Msa1087870:CDS 30.0%
!! ATCGAATTTTGGAGAGTAAT+GGG + chr7_3:641401-641420 Msa1087870:CDS 30.0%
ATAGAGAGTAAGCTTGATTT+CGG + chr7_3:641424-641443 Msa1087870:CDS 30.0%
AACTGAATGATCAGAAAGTT+AGG + chr7_3:641461-641480 Msa1087870:CDS 30.0%
! AAGCTTTATGATGAATGTTC+AGG + chr7_3:641750-641769 Msa1087870:CDS 30.0%
TTGTTGAACAATCAACACTT+GGG + chr7_3:641817-641836 Msa1087870:CDS 30.0%
! ATATTTCTTTCTCATTGGCT+GGG - chr7_3:641906-641925 None:intergenic 30.0%
AATATTTCTTTCTCATTGGC+TGG - chr7_3:641907-641926 None:intergenic 30.0%
!! TTGATGTTGATGATATACCT+AGG + chr7_3:640810-640829 Msa1087870:CDS 30.0%
TTAGGTATATCGATCAAAAC+AGG - chr7_3:640881-640900 None:intergenic 30.0%
!!! TGTTTTGATCGATATACCTA+AGG + chr7_3:640880-640899 Msa1087870:CDS 30.0%
ATCAACCTATTAGGTTAACT+GGG + chr7_3:640936-640955 Msa1087870:CDS 30.0%
ATATACCCAGTTAACCTAAT+AGG - chr7_3:640944-640963 None:intergenic 30.0%
! AAGAAACCTGTTTTGTATGT+TGG + chr7_3:641031-641050 Msa1087870:CDS 30.0%
GACTGTTTATGCTAATTATG+CGG + chr7_3:641192-641211 Msa1087870:CDS 30.0%
!! AATCGAATTTTGGAGAGTAA+TGG + chr7_3:641400-641419 Msa1087870:CDS 30.0%
!! ATCGAATTTTGGAGAGTAAT+GGG + chr7_3:641401-641420 Msa1087870:CDS 30.0%
ATAGAGAGTAAGCTTGATTT+CGG + chr7_3:641424-641443 Msa1087870:CDS 30.0%
AACTGAATGATCAGAAAGTT+AGG + chr7_3:641461-641480 Msa1087870:CDS 30.0%
! AAGCTTTATGATGAATGTTC+AGG + chr7_3:641750-641769 Msa1087870:CDS 30.0%
TTGTTGAACAATCAACACTT+GGG + chr7_3:641817-641836 Msa1087870:CDS 30.0%
! ATATTTCTTTCTCATTGGCT+GGG - chr7_3:641906-641925 None:intergenic 30.0%
AATATTTCTTTCTCATTGGC+TGG - chr7_3:641907-641926 None:intergenic 30.0%
!!! TTTTGGTTTGGAAGTGATTG+TGG - chr7_3:640236-640255 None:intergenic 35.0%
!! TGATTCTGAAAACGTGGTTT+TGG - chr7_3:640253-640272 None:intergenic 35.0%
AATCGGGAAATGAATTGTTG+AGG - chr7_3:640386-640405 None:intergenic 35.0%
GATCTAGTTACCTCAACAAT+CGG - chr7_3:640764-640783 None:intergenic 35.0%
!! GCGTTTTTATTAGCTTCTAG+TGG + chr7_3:640845-640864 Msa1087870:CDS 35.0%
!! CTAATAGGTTGATCCCAATT+CGG - chr7_3:640929-640948 None:intergenic 35.0%
GATCAACCTATTAGGTTAAC+TGG + chr7_3:640935-640954 Msa1087870:CDS 35.0%
GGTTAACTGGGTATATGAAT+AGG + chr7_3:640948-640967 Msa1087870:CDS 35.0%
GTATATGAATAGGTTACCCA+AGG + chr7_3:640958-640977 Msa1087870:CDS 35.0%
ACAGATTGTGAGGTTGTTAT+TGG + chr7_3:641003-641022 Msa1087870:CDS 35.0%
! AAACCTGTTTTGTATGTTGG+TGG + chr7_3:641034-641053 Msa1087870:CDS 35.0%
ATATTGATGCTGCTGAGATT+GGG + chr7_3:641317-641336 Msa1087870:CDS 35.0%
!! GATTTGAAGTTGGCTTTGAA+GGG + chr7_3:641373-641392 Msa1087870:CDS 35.0%
!! ATTTGAAGTTGGCTTTGAAG+GGG + chr7_3:641374-641393 Msa1087870:CDS 35.0%
TATGATGAATGTTCAGGAGT+TGG + chr7_3:641756-641775 Msa1087870:CDS 35.0%
GTTGTTGAACAATCAACACT+TGG + chr7_3:641816-641835 Msa1087870:CDS 35.0%
GGGGAATATTTCTTTCTCAT+TGG - chr7_3:641911-641930 None:intergenic 35.0%
CTGCAAACTTCAACATATTG+GGG - chr7_3:641930-641949 None:intergenic 35.0%
CCTGCAAACTTCAACATATT+GGG - chr7_3:641931-641950 None:intergenic 35.0%
ACCTGCAAACTTCAACATAT+TGG - chr7_3:641932-641951 None:intergenic 35.0%
ACAATGACATCAAGAAGGTA+GGG - chr7_3:642036-642055 None:intergenic 35.0%
TACAATGACATCAAGAAGGT+AGG - chr7_3:642037-642056 None:intergenic 35.0%
!!! TTTTGGTTTGGAAGTGATTG+TGG - chr7_3:640236-640255 None:intergenic 35.0%
!! TGATTCTGAAAACGTGGTTT+TGG - chr7_3:640253-640272 None:intergenic 35.0%
AATCGGGAAATGAATTGTTG+AGG - chr7_3:640386-640405 None:intergenic 35.0%
GATCTAGTTACCTCAACAAT+CGG - chr7_3:640764-640783 None:intergenic 35.0%
!! GCGTTTTTATTAGCTTCTAG+TGG + chr7_3:640845-640864 Msa1087870:CDS 35.0%
!! CTAATAGGTTGATCCCAATT+CGG - chr7_3:640929-640948 None:intergenic 35.0%
GATCAACCTATTAGGTTAAC+TGG + chr7_3:640935-640954 Msa1087870:CDS 35.0%
GGTTAACTGGGTATATGAAT+AGG + chr7_3:640948-640967 Msa1087870:CDS 35.0%
GTATATGAATAGGTTACCCA+AGG + chr7_3:640958-640977 Msa1087870:CDS 35.0%
ACAGATTGTGAGGTTGTTAT+TGG + chr7_3:641003-641022 Msa1087870:CDS 35.0%
! AAACCTGTTTTGTATGTTGG+TGG + chr7_3:641034-641053 Msa1087870:CDS 35.0%
ATATTGATGCTGCTGAGATT+GGG + chr7_3:641317-641336 Msa1087870:CDS 35.0%
!! GATTTGAAGTTGGCTTTGAA+GGG + chr7_3:641373-641392 Msa1087870:CDS 35.0%
!! ATTTGAAGTTGGCTTTGAAG+GGG + chr7_3:641374-641393 Msa1087870:CDS 35.0%
TATGATGAATGTTCAGGAGT+TGG + chr7_3:641756-641775 Msa1087870:CDS 35.0%
GTTGTTGAACAATCAACACT+TGG + chr7_3:641816-641835 Msa1087870:CDS 35.0%
GGGGAATATTTCTTTCTCAT+TGG - chr7_3:641911-641930 None:intergenic 35.0%
CTGCAAACTTCAACATATTG+GGG - chr7_3:641930-641949 None:intergenic 35.0%
CCTGCAAACTTCAACATATT+GGG - chr7_3:641931-641950 None:intergenic 35.0%
ACCTGCAAACTTCAACATAT+TGG - chr7_3:641932-641951 None:intergenic 35.0%
ACAATGACATCAAGAAGGTA+GGG - chr7_3:642036-642055 None:intergenic 35.0%
TACAATGACATCAAGAAGGT+AGG - chr7_3:642037-642056 None:intergenic 35.0%
TTGTGGTGAAGATGAAGAGA+TGG - chr7_3:640219-640238 None:intergenic 40.0%
!!! CTGAAAACGTGGTTTTGGTT+TGG - chr7_3:640248-640267 None:intergenic 40.0%
! GGTAAGTGATTCTGAAAACG+TGG - chr7_3:640259-640278 None:intergenic 40.0%
TGTTTGGGGAAGTGGAAAAT+GGG - chr7_3:640280-640299 None:intergenic 40.0%
!!! TTTTTGAGTAGGGTTGGAGA+TGG - chr7_3:640345-640364 None:intergenic 40.0%
!!! AGTGGTTTTTTGAGTAGGGT+TGG - chr7_3:640351-640370 None:intergenic 40.0%
!!! TGGGAGTGGTTTTTTGAGTA+GGG - chr7_3:640355-640374 None:intergenic 40.0%
!!! ATGGGAGTGGTTTTTTGAGT+AGG - chr7_3:640356-640375 None:intergenic 40.0%
AAATGAATTGTTGAGGTGGG+GGG - chr7_3:640379-640398 None:intergenic 40.0%
GAAATGAATTGTTGAGGTGG+GGG - chr7_3:640380-640399 None:intergenic 40.0%
GGAAATGAATTGTTGAGGTG+GGG - chr7_3:640381-640400 None:intergenic 40.0%
GGGAAATGAATTGTTGAGGT+GGG - chr7_3:640382-640401 None:intergenic 40.0%
ATCAGTACCAATCATTCTCC+GGG - chr7_3:640726-640745 None:intergenic 40.0%
CATCAGTACCAATCATTCTC+CGG - chr7_3:640727-640746 None:intergenic 40.0%
TCAAGAAACTCCGATTGTTG+AGG + chr7_3:640751-640770 Msa1087870:CDS 40.0%
AACGCTTCATTCACTATCCT+AGG - chr7_3:640830-640849 None:intergenic 40.0%
ATATCGATCAAAACAGGTCC+AGG - chr7_3:640875-640894 None:intergenic 40.0%
ACCTAAGGATATTCAGCAAC+AGG + chr7_3:640895-640914 Msa1087870:CDS 40.0%
ACCTGTTGCTGAATATCCTT+AGG - chr7_3:640899-640918 None:intergenic 40.0%
AACAGGTTTCTGTTCCGAAT+TGG + chr7_3:640912-640931 Msa1087870:CDS 40.0%
ACAGGTTTCTGTTCCGAATT+GGG + chr7_3:640913-640932 Msa1087870:CDS 40.0%
CGAATTGGGATCAACCTATT+AGG + chr7_3:640927-640946 Msa1087870:CDS 40.0%
TGTTCCAAATGTGCCTCTTT+CGG - chr7_3:640986-641005 None:intergenic 40.0%
! CACATTTGGAACAGATTGTG+AGG + chr7_3:640993-641012 Msa1087870:CDS 40.0%
TGGTAGTTTGAATTGTAGCG+AGG + chr7_3:641057-641076 Msa1087870:CDS 40.0%
TGAATTGTAGCGAGGAATTG+AGG + chr7_3:641065-641084 Msa1087870:CDS 40.0%
ACCTGTTGCTAGTACTTTGA+TGG + chr7_3:641111-641130 Msa1087870:CDS 40.0%
CCTGTTGCTAGTACTTTGAT+GGG + chr7_3:641112-641131 Msa1087870:CDS 40.0%
CTGTTGCTAGTACTTTGATG+GGG + chr7_3:641113-641132 Msa1087870:CDS 40.0%
ATTCTCATCCGAACTAGGAT+AGG - chr7_3:641146-641165 None:intergenic 40.0%
AACGAATTCTCATCCGAACT+AGG - chr7_3:641151-641170 None:intergenic 40.0%
AGAATTCGTTGCAGATGCTT+GGG + chr7_3:641161-641180 Msa1087870:CDS 40.0%
! AGTGATCTTTTGCTTGCGTT+TGG + chr7_3:641223-641242 Msa1087870:CDS 40.0%
! GTGATCTTTTGCTTGCGTTT+GGG + chr7_3:641224-641243 Msa1087870:CDS 40.0%
! TGATCTTTTGCTTGCGTTTG+GGG + chr7_3:641225-641244 Msa1087870:CDS 40.0%
! TTGGGGTTAGGTTTGATGAT+CGG + chr7_3:641242-641261 Msa1087870:CDS 40.0%
CAATATGAACAATCTTCGCC+CGG - chr7_3:641297-641316 None:intergenic 40.0%
GATATTGATGCTGCTGAGAT+TGG + chr7_3:641316-641335 Msa1087870:CDS 40.0%
!! GGATTTGAAGTTGGCTTTGA+AGG + chr7_3:641372-641391 Msa1087870:CDS 40.0%
! GAAGGGGATCAATCGAATTT+TGG + chr7_3:641390-641409 Msa1087870:CDS 40.0%
AGAACCTGTATAGCATACTG+CGG - chr7_3:641526-641545 None:intergenic 40.0%
TTCTTGACGAGCTTACCAAT+GGG + chr7_3:641542-641561 Msa1087870:CDS 40.0%
!! GCTATCATAAGTACTGGTGT+TGG + chr7_3:641568-641587 Msa1087870:CDS 40.0%
TGTTGGACAACATCAGATGT+GGG + chr7_3:641585-641604 Msa1087870:CDS 40.0%
TTTATAGGTACAAGAGACCG+AGG + chr7_3:641617-641636 Msa1087870:CDS 40.0%
GAACAATCAACACTTGGGTA+TGG + chr7_3:641822-641841 Msa1087870:CDS 40.0%
CCCAATATGTTGAAGTTTGC+AGG + chr7_3:641928-641947 Msa1087870:CDS 40.0%
! TTTTCTGAATCGCTGCTCTA+AGG - chr7_3:641996-642015 None:intergenic 40.0%
CAGAAAATGTTAGATACCCC+TGG + chr7_3:642009-642028 Msa1087870:CDS 40.0%
CAATGACATCAAGAAGGTAG+GGG - chr7_3:642035-642054 None:intergenic 40.0%
TTGCCAATGATTCCTGCAAA+TGG + chr7_3:642075-642094 Msa1087870:CDS 40.0%
GATCCATTTGCAGGAATCAT+TGG - chr7_3:642081-642100 None:intergenic 40.0%
TTTGAGGATGTCATAACCGA+GGG + chr7_3:642102-642121 Msa1087870:CDS 40.0%
TTGTGGTGAAGATGAAGAGA+TGG - chr7_3:640219-640238 None:intergenic 40.0%
!!! CTGAAAACGTGGTTTTGGTT+TGG - chr7_3:640248-640267 None:intergenic 40.0%
! GGTAAGTGATTCTGAAAACG+TGG - chr7_3:640259-640278 None:intergenic 40.0%
TGTTTGGGGAAGTGGAAAAT+GGG - chr7_3:640280-640299 None:intergenic 40.0%
!!! TTTTTGAGTAGGGTTGGAGA+TGG - chr7_3:640345-640364 None:intergenic 40.0%
!!! AGTGGTTTTTTGAGTAGGGT+TGG - chr7_3:640351-640370 None:intergenic 40.0%
!!! TGGGAGTGGTTTTTTGAGTA+GGG - chr7_3:640355-640374 None:intergenic 40.0%
!!! ATGGGAGTGGTTTTTTGAGT+AGG - chr7_3:640356-640375 None:intergenic 40.0%
AAATGAATTGTTGAGGTGGG+GGG - chr7_3:640379-640398 None:intergenic 40.0%
GAAATGAATTGTTGAGGTGG+GGG - chr7_3:640380-640399 None:intergenic 40.0%
GGAAATGAATTGTTGAGGTG+GGG - chr7_3:640381-640400 None:intergenic 40.0%
GGGAAATGAATTGTTGAGGT+GGG - chr7_3:640382-640401 None:intergenic 40.0%
ATCAGTACCAATCATTCTCC+GGG - chr7_3:640726-640745 None:intergenic 40.0%
CATCAGTACCAATCATTCTC+CGG - chr7_3:640727-640746 None:intergenic 40.0%
TCAAGAAACTCCGATTGTTG+AGG + chr7_3:640751-640770 Msa1087870:CDS 40.0%
AACGCTTCATTCACTATCCT+AGG - chr7_3:640830-640849 None:intergenic 40.0%
ATATCGATCAAAACAGGTCC+AGG - chr7_3:640875-640894 None:intergenic 40.0%
ACCTAAGGATATTCAGCAAC+AGG + chr7_3:640895-640914 Msa1087870:CDS 40.0%
ACCTGTTGCTGAATATCCTT+AGG - chr7_3:640899-640918 None:intergenic 40.0%
AACAGGTTTCTGTTCCGAAT+TGG + chr7_3:640912-640931 Msa1087870:CDS 40.0%
ACAGGTTTCTGTTCCGAATT+GGG + chr7_3:640913-640932 Msa1087870:CDS 40.0%
CGAATTGGGATCAACCTATT+AGG + chr7_3:640927-640946 Msa1087870:CDS 40.0%
TGTTCCAAATGTGCCTCTTT+CGG - chr7_3:640986-641005 None:intergenic 40.0%
! CACATTTGGAACAGATTGTG+AGG + chr7_3:640993-641012 Msa1087870:CDS 40.0%
TGGTAGTTTGAATTGTAGCG+AGG + chr7_3:641057-641076 Msa1087870:CDS 40.0%
TGAATTGTAGCGAGGAATTG+AGG + chr7_3:641065-641084 Msa1087870:CDS 40.0%
ACCTGTTGCTAGTACTTTGA+TGG + chr7_3:641111-641130 Msa1087870:CDS 40.0%
CCTGTTGCTAGTACTTTGAT+GGG + chr7_3:641112-641131 Msa1087870:CDS 40.0%
CTGTTGCTAGTACTTTGATG+GGG + chr7_3:641113-641132 Msa1087870:CDS 40.0%
ATTCTCATCCGAACTAGGAT+AGG - chr7_3:641146-641165 None:intergenic 40.0%
AACGAATTCTCATCCGAACT+AGG - chr7_3:641151-641170 None:intergenic 40.0%
AGAATTCGTTGCAGATGCTT+GGG + chr7_3:641161-641180 Msa1087870:CDS 40.0%
! AGTGATCTTTTGCTTGCGTT+TGG + chr7_3:641223-641242 Msa1087870:CDS 40.0%
! GTGATCTTTTGCTTGCGTTT+GGG + chr7_3:641224-641243 Msa1087870:CDS 40.0%
! TGATCTTTTGCTTGCGTTTG+GGG + chr7_3:641225-641244 Msa1087870:CDS 40.0%
! TTGGGGTTAGGTTTGATGAT+CGG + chr7_3:641242-641261 Msa1087870:CDS 40.0%
CAATATGAACAATCTTCGCC+CGG - chr7_3:641297-641316 None:intergenic 40.0%
GATATTGATGCTGCTGAGAT+TGG + chr7_3:641316-641335 Msa1087870:CDS 40.0%
!! GGATTTGAAGTTGGCTTTGA+AGG + chr7_3:641372-641391 Msa1087870:CDS 40.0%
! GAAGGGGATCAATCGAATTT+TGG + chr7_3:641390-641409 Msa1087870:CDS 40.0%
AGAACCTGTATAGCATACTG+CGG - chr7_3:641526-641545 None:intergenic 40.0%
TTCTTGACGAGCTTACCAAT+GGG + chr7_3:641542-641561 Msa1087870:CDS 40.0%
!! GCTATCATAAGTACTGGTGT+TGG + chr7_3:641568-641587 Msa1087870:CDS 40.0%
TGTTGGACAACATCAGATGT+GGG + chr7_3:641585-641604 Msa1087870:CDS 40.0%
TTTATAGGTACAAGAGACCG+AGG + chr7_3:641617-641636 Msa1087870:CDS 40.0%
GAACAATCAACACTTGGGTA+TGG + chr7_3:641822-641841 Msa1087870:CDS 40.0%
CCCAATATGTTGAAGTTTGC+AGG + chr7_3:641928-641947 Msa1087870:CDS 40.0%
! TTTTCTGAATCGCTGCTCTA+AGG - chr7_3:641996-642015 None:intergenic 40.0%
CAGAAAATGTTAGATACCCC+TGG + chr7_3:642009-642028 Msa1087870:CDS 40.0%
CAATGACATCAAGAAGGTAG+GGG - chr7_3:642035-642054 None:intergenic 40.0%
TTGCCAATGATTCCTGCAAA+TGG + chr7_3:642075-642094 Msa1087870:CDS 40.0%
GATCCATTTGCAGGAATCAT+TGG - chr7_3:642081-642100 None:intergenic 40.0%
TTTGAGGATGTCATAACCGA+GGG + chr7_3:642102-642121 Msa1087870:CDS 40.0%
TGGTGAAGATGAAGAGATGG+TGG - chr7_3:640216-640235 None:intergenic 45.0%
GTGTTTGGGGAAGTGGAAAA+TGG - chr7_3:640281-640300 None:intergenic 45.0%
!! TGAGCTTGAAGGGAGTGTTT+GGG - chr7_3:640295-640314 None:intergenic 45.0%
!! TTGAGCTTGAAGGGAGTGTT+TGG - chr7_3:640296-640315 None:intergenic 45.0%
!! AAGCGGAGATTTTGAGAGAG+CGG - chr7_3:640322-640341 None:intergenic 45.0%
CGGGAAATGAATTGTTGAGG+TGG - chr7_3:640383-640402 None:intergenic 45.0%
ACAAATGTCTTCGCTTACCC+TGG + chr7_3:640470-640489 Msa1087870:CDS 45.0%
TGACGAGATTAGTAGCACCT+GGG - chr7_3:640643-640662 None:intergenic 45.0%
GTTCCTCTTATTGCCATCAC+CGG + chr7_3:640692-640711 Msa1087870:CDS 45.0%
TCAGTACCAATCATTCTCCG+GGG - chr7_3:640725-640744 None:intergenic 45.0%
TTAGCTTCTAGTGGTAGACC+TGG + chr7_3:640854-640873 Msa1087870:CDS 45.0%
CCACCACCAACATACAAAAC+AGG - chr7_3:641040-641059 None:intergenic 45.0%
!! CCTGTTTTGTATGTTGGTGG+TGG + chr7_3:641037-641056 Msa1087870:CDS 45.0%
ATTGTAGCGAGGAATTGAGG+CGG + chr7_3:641068-641087 Msa1087870:CDS 45.0%
!! AGGCGGTTTGTTGAGTTAAC+CGG + chr7_3:641085-641104 Msa1087870:CDS 45.0%
AGTACTAGCAACAGGTACAC+CGG - chr7_3:641107-641126 None:intergenic 45.0%
! CCCATCAAAGTACTAGCAAC+AGG - chr7_3:641115-641134 None:intergenic 45.0%
TGCTAGTACTTTGATGGGGT+TGG + chr7_3:641117-641136 Msa1087870:CDS 45.0%
GCTAGTACTTTGATGGGGTT+GGG + chr7_3:641118-641137 Msa1087870:CDS 45.0%
GTTGGGTTCCTATCCTAGTT+CGG + chr7_3:641135-641154 Msa1087870:CDS 45.0%
GAGAATTCGTTGCAGATGCT+TGG + chr7_3:641160-641179 Msa1087870:CDS 45.0%
!! TTTTGCTTGCGTTTGGGGTT+AGG + chr7_3:641230-641249 Msa1087870:CDS 45.0%
! TGGGGTTAGGTTTGATGATC+GGG + chr7_3:641243-641262 Msa1087870:CDS 45.0%
! AGGTTTGATGATCGGGTTAC+TGG + chr7_3:641250-641269 Msa1087870:CDS 45.0%
! GGTTTGATGATCGGGTTACT+GGG + chr7_3:641251-641270 Msa1087870:CDS 45.0%
GAATAAGCAGCCTCATGTGT+CGG + chr7_3:641342-641361 Msa1087870:CDS 45.0%
! GGTTTGTGGGGATTTGAAGT+TGG + chr7_3:641363-641382 Msa1087870:CDS 45.0%
GAGAGTAAGCTTGATTTCGG+AGG + chr7_3:641427-641446 Msa1087870:CDS 45.0%
GTAAGCTTGATTTCGGAGGT+TGG + chr7_3:641431-641450 Msa1087870:CDS 45.0%
GTTCTTGACGAGCTTACCAA+TGG + chr7_3:641541-641560 Msa1087870:CDS 45.0%
TCTTGACGAGCTTACCAATG+GGG + chr7_3:641543-641562 Msa1087870:CDS 45.0%
ACTTATGATAGCCTCCCCAT+TGG - chr7_3:641560-641579 None:intergenic 45.0%
GTGTTGGACAACATCAGATG+TGG + chr7_3:641584-641603 Msa1087870:CDS 45.0%
!! TGTGGGCTGCTCAGTTTTAT+AGG + chr7_3:641602-641621 Msa1087870:CDS 45.0%
ATGTCAACCACAATAGCGTC+GGG - chr7_3:641718-641737 None:intergenic 45.0%
GATGTCAACCACAATAGCGT+CGG - chr7_3:641719-641738 None:intergenic 45.0%
GCTATTGTGGTTGACATCGA+TGG + chr7_3:641721-641740 Msa1087870:CDS 45.0%
TCAGGAGTTGGCTACTATCA+AGG + chr7_3:641768-641787 Msa1087870:CDS 45.0%
AATAGAGCTCACACCTACCT+GGG + chr7_3:641877-641896 Msa1087870:CDS 45.0%
TTGAAGTTTGCAGGTGCTTG+TGG + chr7_3:641937-641956 Msa1087870:CDS 45.0%
GCGGTACAATGACATCAAGA+AGG - chr7_3:642041-642060 None:intergenic 45.0%
TCCTGCAAATGGATCCTTTG+AGG + chr7_3:642086-642105 Msa1087870:CDS 45.0%
TCCTCAAAGGATCCATTTGC+AGG - chr7_3:642090-642109 None:intergenic 45.0%
CTCGGTTATGACATCCTCAA+AGG - chr7_3:642103-642122 None:intergenic 45.0%
! CTTTGAGGATGTCATAACCG+AGG + chr7_3:642101-642120 Msa1087870:CDS 45.0%
TGGTGAAGATGAAGAGATGG+TGG - chr7_3:640216-640235 None:intergenic 45.0%
GTGTTTGGGGAAGTGGAAAA+TGG - chr7_3:640281-640300 None:intergenic 45.0%
!! TGAGCTTGAAGGGAGTGTTT+GGG - chr7_3:640295-640314 None:intergenic 45.0%
!! TTGAGCTTGAAGGGAGTGTT+TGG - chr7_3:640296-640315 None:intergenic 45.0%
!! AAGCGGAGATTTTGAGAGAG+CGG - chr7_3:640322-640341 None:intergenic 45.0%
CGGGAAATGAATTGTTGAGG+TGG - chr7_3:640383-640402 None:intergenic 45.0%
ACAAATGTCTTCGCTTACCC+TGG + chr7_3:640470-640489 Msa1087870:CDS 45.0%
TGACGAGATTAGTAGCACCT+GGG - chr7_3:640643-640662 None:intergenic 45.0%
GTTCCTCTTATTGCCATCAC+CGG + chr7_3:640692-640711 Msa1087870:CDS 45.0%
TCAGTACCAATCATTCTCCG+GGG - chr7_3:640725-640744 None:intergenic 45.0%
TTAGCTTCTAGTGGTAGACC+TGG + chr7_3:640854-640873 Msa1087870:CDS 45.0%
CCACCACCAACATACAAAAC+AGG - chr7_3:641040-641059 None:intergenic 45.0%
!! CCTGTTTTGTATGTTGGTGG+TGG + chr7_3:641037-641056 Msa1087870:CDS 45.0%
ATTGTAGCGAGGAATTGAGG+CGG + chr7_3:641068-641087 Msa1087870:CDS 45.0%
!! AGGCGGTTTGTTGAGTTAAC+CGG + chr7_3:641085-641104 Msa1087870:CDS 45.0%
AGTACTAGCAACAGGTACAC+CGG - chr7_3:641107-641126 None:intergenic 45.0%
! CCCATCAAAGTACTAGCAAC+AGG - chr7_3:641115-641134 None:intergenic 45.0%
TGCTAGTACTTTGATGGGGT+TGG + chr7_3:641117-641136 Msa1087870:CDS 45.0%
GCTAGTACTTTGATGGGGTT+GGG + chr7_3:641118-641137 Msa1087870:CDS 45.0%
GTTGGGTTCCTATCCTAGTT+CGG + chr7_3:641135-641154 Msa1087870:CDS 45.0%
GAGAATTCGTTGCAGATGCT+TGG + chr7_3:641160-641179 Msa1087870:CDS 45.0%
!! TTTTGCTTGCGTTTGGGGTT+AGG + chr7_3:641230-641249 Msa1087870:CDS 45.0%
! TGGGGTTAGGTTTGATGATC+GGG + chr7_3:641243-641262 Msa1087870:CDS 45.0%
! AGGTTTGATGATCGGGTTAC+TGG + chr7_3:641250-641269 Msa1087870:CDS 45.0%
! GGTTTGATGATCGGGTTACT+GGG + chr7_3:641251-641270 Msa1087870:CDS 45.0%
GAATAAGCAGCCTCATGTGT+CGG + chr7_3:641342-641361 Msa1087870:CDS 45.0%
! GGTTTGTGGGGATTTGAAGT+TGG + chr7_3:641363-641382 Msa1087870:CDS 45.0%
GAGAGTAAGCTTGATTTCGG+AGG + chr7_3:641427-641446 Msa1087870:CDS 45.0%
GTAAGCTTGATTTCGGAGGT+TGG + chr7_3:641431-641450 Msa1087870:CDS 45.0%
GTTCTTGACGAGCTTACCAA+TGG + chr7_3:641541-641560 Msa1087870:CDS 45.0%
TCTTGACGAGCTTACCAATG+GGG + chr7_3:641543-641562 Msa1087870:CDS 45.0%
ACTTATGATAGCCTCCCCAT+TGG - chr7_3:641560-641579 None:intergenic 45.0%
GTGTTGGACAACATCAGATG+TGG + chr7_3:641584-641603 Msa1087870:CDS 45.0%
!! TGTGGGCTGCTCAGTTTTAT+AGG + chr7_3:641602-641621 Msa1087870:CDS 45.0%
ATGTCAACCACAATAGCGTC+GGG - chr7_3:641718-641737 None:intergenic 45.0%
GATGTCAACCACAATAGCGT+CGG - chr7_3:641719-641738 None:intergenic 45.0%
GCTATTGTGGTTGACATCGA+TGG + chr7_3:641721-641740 Msa1087870:CDS 45.0%
TCAGGAGTTGGCTACTATCA+AGG + chr7_3:641768-641787 Msa1087870:CDS 45.0%
AATAGAGCTCACACCTACCT+GGG + chr7_3:641877-641896 Msa1087870:CDS 45.0%
TTGAAGTTTGCAGGTGCTTG+TGG + chr7_3:641937-641956 Msa1087870:CDS 45.0%
GCGGTACAATGACATCAAGA+AGG - chr7_3:642041-642060 None:intergenic 45.0%
TCCTGCAAATGGATCCTTTG+AGG + chr7_3:642086-642105 Msa1087870:CDS 45.0%
TCCTCAAAGGATCCATTTGC+AGG - chr7_3:642090-642109 None:intergenic 45.0%
CTCGGTTATGACATCCTCAA+AGG - chr7_3:642103-642122 None:intergenic 45.0%
! CTTTGAGGATGTCATAACCG+AGG + chr7_3:642101-642120 Msa1087870:CDS 45.0%
! AGAGATGGTGGTTGTGAACG+CGG - chr7_3:640204-640223 None:intergenic 50.0%
!! GAGCTTGAAGGGAGTGTTTG+GGG - chr7_3:640294-640313 None:intergenic 50.0%
AGTAGGGTTGGAGATGGAAG+CGG - chr7_3:640339-640358 None:intergenic 50.0%
AATTGTTGAGGTGGGGGGAT+GGG - chr7_3:640374-640393 None:intergenic 50.0%
! AGGATATCTGCGCCTTTTCG+GGG - chr7_3:640422-640441 None:intergenic 50.0%
! GAGGATATCTGCGCCTTTTC+GGG - chr7_3:640423-640442 None:intergenic 50.0%
! CGAGGATATCTGCGCCTTTT+CGG - chr7_3:640424-640443 None:intergenic 50.0%
AATGTCTTCGCTTACCCTGG+CGG + chr7_3:640473-640492 Msa1087870:CDS 50.0%
TTCCACCTTGTTCGTGACGA+GGG - chr7_3:640556-640575 None:intergenic 50.0%
ATTCCACCTTGTTCGTGACG+AGG - chr7_3:640557-640576 None:intergenic 50.0%
CTGACGAGATTAGTAGCACC+TGG - chr7_3:640644-640663 None:intergenic 50.0%
!! GGTGCTACTAATCTCGTCAG+TGG + chr7_3:640644-640663 Msa1087870:CDS 50.0%
! TGACCGGTGATGGCAATAAG+AGG - chr7_3:640698-640717 None:intergenic 50.0%
TCTTATTGCCATCACCGGTC+AGG + chr7_3:640697-640716 Msa1087870:CDS 50.0%
TTGCAGATGCTTGGGATGCA+TGG + chr7_3:641169-641188 Msa1087870:CDS 50.0%
TGCAGATGCTTGGGATGCAT+GGG + chr7_3:641170-641189 Msa1087870:CDS 50.0%
!! AGCCTCATGTGTCGGTTTGT+GGG + chr7_3:641350-641369 Msa1087870:CDS 50.0%
TCCTCCGCAGTATGCTATAC+AGG + chr7_3:641519-641538 Msa1087870:CDS 50.0%
ACCTGTATAGCATACTGCGG+AGG - chr7_3:641523-641542 None:intergenic 50.0%
GGGGAGGCTATCATAAGTAC+TGG + chr7_3:641562-641581 Msa1087870:CDS 50.0%
! TGGTTGACTTCTGCTGGTCT+TGG + chr7_3:641643-641662 Msa1087870:CDS 50.0%
CGCTATGGGATTTGGATTGC+CGG + chr7_3:641666-641685 Msa1087870:CDS 50.0%
! AACCACAATAGCGTCGGGAT+TGG - chr7_3:641713-641732 None:intergenic 50.0%
GTGGTTGACATCGATGGTGA+TGG + chr7_3:641727-641746 Msa1087870:CDS 50.0%
GGAGTTGGCTACTATCAAGG+TGG + chr7_3:641771-641790 Msa1087870:CDS 50.0%
ACTTGGGTATGGTTGTCCAG+TGG + chr7_3:641833-641852 Msa1087870:CDS 50.0%
CTTGGGTATGGTTGTCCAGT+GGG + chr7_3:641834-641853 Msa1087870:CDS 50.0%
TATAGAACCGATCCTCCCAC+TGG - chr7_3:641852-641871 None:intergenic 50.0%
CAGGTAGGTGTGAGCTCTAT+TGG - chr7_3:641878-641897 None:intergenic 50.0%
CAATAGAGCTCACACCTACC+TGG + chr7_3:641876-641895 Msa1087870:CDS 50.0%
TGCAGGTGCTTGTGGTATAC+CGG + chr7_3:641945-641964 Msa1087870:CDS 50.0%
GGCAACACATGCTCTTGATG+CGG - chr7_3:642060-642079 None:intergenic 50.0%
GATGTCATAACCGAGGGTGA+TGG + chr7_3:642108-642127 Msa1087870:CDS 50.0%
ACTTATCCTGCCATCACCCT+CGG - chr7_3:642121-642140 None:intergenic 50.0%
! AGAGATGGTGGTTGTGAACG+CGG - chr7_3:640204-640223 None:intergenic 50.0%
!! GAGCTTGAAGGGAGTGTTTG+GGG - chr7_3:640294-640313 None:intergenic 50.0%
AGTAGGGTTGGAGATGGAAG+CGG - chr7_3:640339-640358 None:intergenic 50.0%
AATTGTTGAGGTGGGGGGAT+GGG - chr7_3:640374-640393 None:intergenic 50.0%
! AGGATATCTGCGCCTTTTCG+GGG - chr7_3:640422-640441 None:intergenic 50.0%
! GAGGATATCTGCGCCTTTTC+GGG - chr7_3:640423-640442 None:intergenic 50.0%
! CGAGGATATCTGCGCCTTTT+CGG - chr7_3:640424-640443 None:intergenic 50.0%
AATGTCTTCGCTTACCCTGG+CGG + chr7_3:640473-640492 Msa1087870:CDS 50.0%
TTCCACCTTGTTCGTGACGA+GGG - chr7_3:640556-640575 None:intergenic 50.0%
ATTCCACCTTGTTCGTGACG+AGG - chr7_3:640557-640576 None:intergenic 50.0%
CTGACGAGATTAGTAGCACC+TGG - chr7_3:640644-640663 None:intergenic 50.0%
!! GGTGCTACTAATCTCGTCAG+TGG + chr7_3:640644-640663 Msa1087870:CDS 50.0%
! TGACCGGTGATGGCAATAAG+AGG - chr7_3:640698-640717 None:intergenic 50.0%
TCTTATTGCCATCACCGGTC+AGG + chr7_3:640697-640716 Msa1087870:CDS 50.0%
TTGCAGATGCTTGGGATGCA+TGG + chr7_3:641169-641188 Msa1087870:CDS 50.0%
TGCAGATGCTTGGGATGCAT+GGG + chr7_3:641170-641189 Msa1087870:CDS 50.0%
!! AGCCTCATGTGTCGGTTTGT+GGG + chr7_3:641350-641369 Msa1087870:CDS 50.0%
TCCTCCGCAGTATGCTATAC+AGG + chr7_3:641519-641538 Msa1087870:CDS 50.0%
ACCTGTATAGCATACTGCGG+AGG - chr7_3:641523-641542 None:intergenic 50.0%
GGGGAGGCTATCATAAGTAC+TGG + chr7_3:641562-641581 Msa1087870:CDS 50.0%
! TGGTTGACTTCTGCTGGTCT+TGG + chr7_3:641643-641662 Msa1087870:CDS 50.0%
CGCTATGGGATTTGGATTGC+CGG + chr7_3:641666-641685 Msa1087870:CDS 50.0%
! AACCACAATAGCGTCGGGAT+TGG - chr7_3:641713-641732 None:intergenic 50.0%
GTGGTTGACATCGATGGTGA+TGG + chr7_3:641727-641746 Msa1087870:CDS 50.0%
GGAGTTGGCTACTATCAAGG+TGG + chr7_3:641771-641790 Msa1087870:CDS 50.0%
ACTTGGGTATGGTTGTCCAG+TGG + chr7_3:641833-641852 Msa1087870:CDS 50.0%
CTTGGGTATGGTTGTCCAGT+GGG + chr7_3:641834-641853 Msa1087870:CDS 50.0%
TATAGAACCGATCCTCCCAC+TGG - chr7_3:641852-641871 None:intergenic 50.0%
CAGGTAGGTGTGAGCTCTAT+TGG - chr7_3:641878-641897 None:intergenic 50.0%
CAATAGAGCTCACACCTACC+TGG + chr7_3:641876-641895 Msa1087870:CDS 50.0%
TGCAGGTGCTTGTGGTATAC+CGG + chr7_3:641945-641964 Msa1087870:CDS 50.0%
GGCAACACATGCTCTTGATG+CGG - chr7_3:642060-642079 None:intergenic 50.0%
GATGTCATAACCGAGGGTGA+TGG + chr7_3:642108-642127 Msa1087870:CDS 50.0%
ACTTATCCTGCCATCACCCT+CGG - chr7_3:642121-642140 None:intergenic 50.0%
! GAACGCGGTTTTTGCAGCAG+TGG - chr7_3:640189-640208 None:intergenic 55.0%
!! GAAGGGAGTGTTTGGGGAAG+TGG - chr7_3:640288-640307 None:intergenic 55.0%
GAGCGGTGGTTGAGCTTGAA+GGG - chr7_3:640305-640324 None:intergenic 55.0%
AGAGCGGTGGTTGAGCTTGA+AGG - chr7_3:640306-640325 None:intergenic 55.0%
!! CGGAGATTTTGAGAGAGCGG+TGG - chr7_3:640319-640338 None:intergenic 55.0%
GAATTGTTGAGGTGGGGGGA+TGG - chr7_3:640375-640394 None:intergenic 55.0%
GGGTTCGTTAGGGGCAAATC+GGG - chr7_3:640402-640421 None:intergenic 55.0%
GGGGTTCGTTAGGGGCAAAT+CGG - chr7_3:640403-640422 None:intergenic 55.0%
!! GCCTTTTCGGGGTTCGTTAG+GGG - chr7_3:640411-640430 None:intergenic 55.0%
!! CGCCTTTTCGGGGTTCGTTA+GGG - chr7_3:640412-640431 None:intergenic 55.0%
! GTCGAAGCACTCGAACGTCA+GGG + chr7_3:640443-640462 Msa1087870:CDS 55.0%
!! TTTCCATTGAAGCGCCGCCA+GGG - chr7_3:640490-640509 None:intergenic 55.0%
!! ATTTCCATTGAAGCGCCGCC+AGG - chr7_3:640491-640510 None:intergenic 55.0%
AGGGAGGACGTTACGAATGG+CGG - chr7_3:640537-640556 None:intergenic 55.0%
ACGAGGGAGGACGTTACGAA+TGG - chr7_3:640540-640559 None:intergenic 55.0%
AGGTGGAATATTCGCTGCCG+AGG + chr7_3:640568-640587 Msa1087870:CDS 55.0%
GGTGGAATATTCGCTGCCGA+GGG + chr7_3:640569-640588 Msa1087870:CDS 55.0%
AAGTGGCGATGCAGACACCA+GGG - chr7_3:640616-640635 None:intergenic 55.0%
GAGATTAGTAGCACCTGGGC+CGG - chr7_3:640639-640658 None:intergenic 55.0%
CAGGTTCCCCGGAGAATGAT+TGG + chr7_3:640716-640735 Msa1087870:CDS 55.0%
!! GTTACCCAAGGCACCGAAAG+AGG + chr7_3:640970-640989 Msa1087870:CDS 55.0%
!! TGTGCCTCTTTCGGTGCCTT+GGG - chr7_3:640977-640996 None:intergenic 55.0%
!! ATGTGCCTCTTTCGGTGCCT+TGG - chr7_3:640978-640997 None:intergenic 55.0%
! GGCACCGAAAGAGGCACATT+TGG + chr7_3:640979-640998 Msa1087870:CDS 55.0%
TCGGGTTACTGGGAAGCTTG+AGG + chr7_3:641261-641280 Msa1087870:CDS 55.0%
! AGCTTGAGGCTTTTGCGAGC+CGG + chr7_3:641275-641294 Msa1087870:CDS 55.0%
!! CAGCCTCATGTGTCGGTTTG+TGG + chr7_3:641349-641368 Msa1087870:CDS 55.0%
!! GCCTCATGTGTCGGTTTGTG+GGG + chr7_3:641351-641370 Msa1087870:CDS 55.0%
TCCCCACAAACCGACACATG+AGG - chr7_3:641355-641374 None:intergenic 55.0%
TGACGAGCTTACCAATGGGG+AGG + chr7_3:641546-641565 Msa1087870:CDS 55.0%
GCAGAAGTCAACCACTGCCT+CGG - chr7_3:641637-641656 None:intergenic 55.0%
! AGGCAGTGGTTGACTTCTGC+TGG + chr7_3:641637-641656 Msa1087870:CDS 55.0%
!! TTCTGCTGGTCTTGGCGCTA+TGG + chr7_3:641651-641670 Msa1087870:CDS 55.0%
!! TCTGCTGGTCTTGGCGCTAT+GGG + chr7_3:641652-641671 Msa1087870:CDS 55.0%
GGTCTTGGCGCTATGGGATT+TGG + chr7_3:641658-641677 Msa1087870:CDS 55.0%
! ATTTGGATTGCCGGCTGCCA+TGG + chr7_3:641675-641694 Msa1087870:CDS 55.0%
! TTTGGATTGCCGGCTGCCAT+GGG + chr7_3:641676-641695 Msa1087870:CDS 55.0%
ATTGGCAACAGCAGCTCCCA+TGG - chr7_3:641695-641714 None:intergenic 55.0%
TGCCAATCCCGACGCTATTG+TGG + chr7_3:641708-641727 Msa1087870:CDS 55.0%
TGGTTGTCCAGTGGGAGGAT+CGG + chr7_3:641842-641861 Msa1087870:CDS 55.0%
CTCTTTGTCACACGAGCTGC+CGG - chr7_3:641967-641986 None:intergenic 55.0%
GGCAGCTCGTGTGACAAAGA+GGG + chr7_3:641966-641985 Msa1087870:CDS 55.0%
ATCAAGAAGGTAGGGGCCAG+GGG - chr7_3:642028-642047 None:intergenic 55.0%
CATCAAGAAGGTAGGGGCCA+GGG - chr7_3:642029-642048 None:intergenic 55.0%
ACATCAAGAAGGTAGGGGCC+AGG - chr7_3:642030-642049 None:intergenic 55.0%
! TCATAACCGAGGGTGATGGC+AGG + chr7_3:642112-642131 Msa1087870:CDS 55.0%
! GAACGCGGTTTTTGCAGCAG+TGG - chr7_3:640189-640208 None:intergenic 55.0%
!! GAAGGGAGTGTTTGGGGAAG+TGG - chr7_3:640288-640307 None:intergenic 55.0%
GAGCGGTGGTTGAGCTTGAA+GGG - chr7_3:640305-640324 None:intergenic 55.0%
AGAGCGGTGGTTGAGCTTGA+AGG - chr7_3:640306-640325 None:intergenic 55.0%
!! CGGAGATTTTGAGAGAGCGG+TGG - chr7_3:640319-640338 None:intergenic 55.0%
GAATTGTTGAGGTGGGGGGA+TGG - chr7_3:640375-640394 None:intergenic 55.0%
GGGTTCGTTAGGGGCAAATC+GGG - chr7_3:640402-640421 None:intergenic 55.0%
GGGGTTCGTTAGGGGCAAAT+CGG - chr7_3:640403-640422 None:intergenic 55.0%
!! GCCTTTTCGGGGTTCGTTAG+GGG - chr7_3:640411-640430 None:intergenic 55.0%
!! CGCCTTTTCGGGGTTCGTTA+GGG - chr7_3:640412-640431 None:intergenic 55.0%
! GTCGAAGCACTCGAACGTCA+GGG + chr7_3:640443-640462 Msa1087870:CDS 55.0%
!! TTTCCATTGAAGCGCCGCCA+GGG - chr7_3:640490-640509 None:intergenic 55.0%
!! ATTTCCATTGAAGCGCCGCC+AGG - chr7_3:640491-640510 None:intergenic 55.0%
AGGGAGGACGTTACGAATGG+CGG - chr7_3:640537-640556 None:intergenic 55.0%
ACGAGGGAGGACGTTACGAA+TGG - chr7_3:640540-640559 None:intergenic 55.0%
AGGTGGAATATTCGCTGCCG+AGG + chr7_3:640568-640587 Msa1087870:CDS 55.0%
GGTGGAATATTCGCTGCCGA+GGG + chr7_3:640569-640588 Msa1087870:CDS 55.0%
AAGTGGCGATGCAGACACCA+GGG - chr7_3:640616-640635 None:intergenic 55.0%
GAGATTAGTAGCACCTGGGC+CGG - chr7_3:640639-640658 None:intergenic 55.0%
CAGGTTCCCCGGAGAATGAT+TGG + chr7_3:640716-640735 Msa1087870:CDS 55.0%
!! GTTACCCAAGGCACCGAAAG+AGG + chr7_3:640970-640989 Msa1087870:CDS 55.0%
!! TGTGCCTCTTTCGGTGCCTT+GGG - chr7_3:640977-640996 None:intergenic 55.0%
!! ATGTGCCTCTTTCGGTGCCT+TGG - chr7_3:640978-640997 None:intergenic 55.0%
! GGCACCGAAAGAGGCACATT+TGG + chr7_3:640979-640998 Msa1087870:CDS 55.0%
TCGGGTTACTGGGAAGCTTG+AGG + chr7_3:641261-641280 Msa1087870:CDS 55.0%
! AGCTTGAGGCTTTTGCGAGC+CGG + chr7_3:641275-641294 Msa1087870:CDS 55.0%
!! CAGCCTCATGTGTCGGTTTG+TGG + chr7_3:641349-641368 Msa1087870:CDS 55.0%
!! GCCTCATGTGTCGGTTTGTG+GGG + chr7_3:641351-641370 Msa1087870:CDS 55.0%
TCCCCACAAACCGACACATG+AGG - chr7_3:641355-641374 None:intergenic 55.0%
TGACGAGCTTACCAATGGGG+AGG + chr7_3:641546-641565 Msa1087870:CDS 55.0%
GCAGAAGTCAACCACTGCCT+CGG - chr7_3:641637-641656 None:intergenic 55.0%
! AGGCAGTGGTTGACTTCTGC+TGG + chr7_3:641637-641656 Msa1087870:CDS 55.0%
!! TTCTGCTGGTCTTGGCGCTA+TGG + chr7_3:641651-641670 Msa1087870:CDS 55.0%
!! TCTGCTGGTCTTGGCGCTAT+GGG + chr7_3:641652-641671 Msa1087870:CDS 55.0%
GGTCTTGGCGCTATGGGATT+TGG + chr7_3:641658-641677 Msa1087870:CDS 55.0%
! ATTTGGATTGCCGGCTGCCA+TGG + chr7_3:641675-641694 Msa1087870:CDS 55.0%
! TTTGGATTGCCGGCTGCCAT+GGG + chr7_3:641676-641695 Msa1087870:CDS 55.0%
ATTGGCAACAGCAGCTCCCA+TGG - chr7_3:641695-641714 None:intergenic 55.0%
TGCCAATCCCGACGCTATTG+TGG + chr7_3:641708-641727 Msa1087870:CDS 55.0%
TGGTTGTCCAGTGGGAGGAT+CGG + chr7_3:641842-641861 Msa1087870:CDS 55.0%
CTCTTTGTCACACGAGCTGC+CGG - chr7_3:641967-641986 None:intergenic 55.0%
GGCAGCTCGTGTGACAAAGA+GGG + chr7_3:641966-641985 Msa1087870:CDS 55.0%
ATCAAGAAGGTAGGGGCCAG+GGG - chr7_3:642028-642047 None:intergenic 55.0%
CATCAAGAAGGTAGGGGCCA+GGG - chr7_3:642029-642048 None:intergenic 55.0%
ACATCAAGAAGGTAGGGGCC+AGG - chr7_3:642030-642049 None:intergenic 55.0%
! TCATAACCGAGGGTGATGGC+AGG + chr7_3:642112-642131 Msa1087870:CDS 55.0%
GCCCCTAACGAACCCCGAAA+AGG + chr7_3:640407-640426 Msa1087870:CDS 60.0%
!! GCGCCTTTTCGGGGTTCGTT+AGG - chr7_3:640413-640432 None:intergenic 60.0%
GACGTTCGAGTGCTTCGACG+AGG - chr7_3:640442-640461 None:intergenic 60.0%
! CGTCGAAGCACTCGAACGTC+AGG + chr7_3:640442-640461 Msa1087870:CDS 60.0%
TTACCCTGGCGGCGCTTCAA+TGG + chr7_3:640484-640503 Msa1087870:CDS 60.0%
GAGGACGTTACGAATGGCGG+TGG - chr7_3:640534-640553 None:intergenic 60.0%
GTCCTCCCTCGTCACGAACA+AGG + chr7_3:640548-640567 Msa1087870:CDS 60.0%
CACCTTGTTCGTGACGAGGG+AGG - chr7_3:640553-640572 None:intergenic 60.0%
CTCCCTCGTCACGAACAAGG+TGG + chr7_3:640551-640570 Msa1087870:CDS 60.0%
GGAGGAACGAGCGTAACCCT+CGG - chr7_3:640588-640607 None:intergenic 60.0%
GAGGGTTACGCTCGTTCCTC+CGG + chr7_3:640587-640606 Msa1087870:CDS 60.0%
GATGCAGACACCAGGGAGAC+CGG - chr7_3:640609-640628 None:intergenic 60.0%
GAAGTGGCGATGCAGACACC+AGG - chr7_3:640617-640636 None:intergenic 60.0%
GGTGTCTGCATCGCCACTTC+CGG + chr7_3:640617-640636 Msa1087870:CDS 60.0%
CATTCTCCGGGGAACCTGAC+CGG - chr7_3:640714-640733 None:intergenic 60.0%
! GCTTGAGGCTTTTGCGAGCC+GGG + chr7_3:641276-641295 Msa1087870:CDS 60.0%
GGTACAAGAGACCGAGGCAG+TGG + chr7_3:641623-641642 Msa1087870:CDS 60.0%
GGGTATGGTTGTCCAGTGGG+AGG + chr7_3:641837-641856 Msa1087870:CDS 60.0%
ATTGGCTGGGTCTCCCAGGT+AGG - chr7_3:641893-641912 None:intergenic 60.0%
! TCTCATTGGCTGGGTCTCCC+AGG - chr7_3:641897-641916 None:intergenic 60.0%
CGGCAGCTCGTGTGACAAAG+AGG + chr7_3:641965-641984 Msa1087870:CDS 60.0%
GCCCCTAACGAACCCCGAAA+AGG + chr7_3:640407-640426 Msa1087870:CDS 60.0%
!! GCGCCTTTTCGGGGTTCGTT+AGG - chr7_3:640413-640432 None:intergenic 60.0%
GACGTTCGAGTGCTTCGACG+AGG - chr7_3:640442-640461 None:intergenic 60.0%
! CGTCGAAGCACTCGAACGTC+AGG + chr7_3:640442-640461 Msa1087870:CDS 60.0%
TTACCCTGGCGGCGCTTCAA+TGG + chr7_3:640484-640503 Msa1087870:CDS 60.0%
GAGGACGTTACGAATGGCGG+TGG - chr7_3:640534-640553 None:intergenic 60.0%
GTCCTCCCTCGTCACGAACA+AGG + chr7_3:640548-640567 Msa1087870:CDS 60.0%
CACCTTGTTCGTGACGAGGG+AGG - chr7_3:640553-640572 None:intergenic 60.0%
CTCCCTCGTCACGAACAAGG+TGG + chr7_3:640551-640570 Msa1087870:CDS 60.0%
GGAGGAACGAGCGTAACCCT+CGG - chr7_3:640588-640607 None:intergenic 60.0%
GAGGGTTACGCTCGTTCCTC+CGG + chr7_3:640587-640606 Msa1087870:CDS 60.0%
GATGCAGACACCAGGGAGAC+CGG - chr7_3:640609-640628 None:intergenic 60.0%
GAAGTGGCGATGCAGACACC+AGG - chr7_3:640617-640636 None:intergenic 60.0%
GGTGTCTGCATCGCCACTTC+CGG + chr7_3:640617-640636 Msa1087870:CDS 60.0%
CATTCTCCGGGGAACCTGAC+CGG - chr7_3:640714-640733 None:intergenic 60.0%
! GCTTGAGGCTTTTGCGAGCC+GGG + chr7_3:641276-641295 Msa1087870:CDS 60.0%
GGTACAAGAGACCGAGGCAG+TGG + chr7_3:641623-641642 Msa1087870:CDS 60.0%
GGGTATGGTTGTCCAGTGGG+AGG + chr7_3:641837-641856 Msa1087870:CDS 60.0%
ATTGGCTGGGTCTCCCAGGT+AGG - chr7_3:641893-641912 None:intergenic 60.0%
! TCTCATTGGCTGGGTCTCCC+AGG - chr7_3:641897-641916 None:intergenic 60.0%
CGGCAGCTCGTGTGACAAAG+AGG + chr7_3:641965-641984 Msa1087870:CDS 60.0%
TTGAGGTGGGGGGATGGGAG+TGG - chr7_3:640369-640388 None:intergenic 65.0%
AGTAGCACCTGGGCCGGAAG+TGG - chr7_3:640633-640652 None:intergenic 65.0%
CCATCACCGGTCAGGTTCCC+CGG + chr7_3:640705-640724 Msa1087870:CDS 65.0%
ACAGCAGCTCCCATGGCAGC+CGG - chr7_3:641688-641707 None:intergenic 65.0%
TTGAGGTGGGGGGATGGGAG+TGG - chr7_3:640369-640388 None:intergenic 65.0%
AGTAGCACCTGGGCCGGAAG+TGG - chr7_3:640633-640652 None:intergenic 65.0%
CCATCACCGGTCAGGTTCCC+CGG + chr7_3:640705-640724 Msa1087870:CDS 65.0%
ACAGCAGCTCCCATGGCAGC+CGG - chr7_3:641688-641707 None:intergenic 65.0%
GCTCGTTCCTCCGGTCTCCC+TGG + chr7_3:640596-640615 Msa1087870:CDS 70.0%
GCAGACACCAGGGAGACCGG+AGG - chr7_3:640606-640625 None:intergenic 70.0%
TGCATCGCCACTTCCGGCCC+AGG + chr7_3:640623-640642 Msa1087870:CDS 70.0%
CCGGGGAACCTGACCGGTGA+TGG - chr7_3:640708-640727 None:intergenic 70.0%
GCTCGTTCCTCCGGTCTCCC+TGG + chr7_3:640596-640615 Msa1087870:CDS 70.0%
GCAGACACCAGGGAGACCGG+AGG - chr7_3:640606-640625 None:intergenic 70.0%
TGCATCGCCACTTCCGGCCC+AGG + chr7_3:640623-640642 Msa1087870:CDS 70.0%
CCGGGGAACCTGACCGGTGA+TGG - chr7_3:640708-640727 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 640179 642146 640179 ID=Msa1087870;Name=Msa1087870
chr7_3 mRNA 640179 642146 640179 ID=Msa1087870-mRNA-1;Parent=Msa1087870;Name=Msa1087870-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|655
chr7_3 exon 640179 642146 640179 ID=Msa1087870-mRNA-1:exon:281;Parent=Msa1087870-mRNA-1
chr7_3 CDS 640179 642146 640179 ID=Msa1087870-mRNA-1:cds;Parent=Msa1087870-mRNA-1
Gene Sequence

>Msa1087870

ATGGCAGCCACTGCTGCAAAAACCGCGTTCACAACCACCATCTCTTCATCTTCACCACAATCACTTCCAAACCAAAACCACGTTTTCAGAATCACTTACCCATTTTCCACTTCCCCAAACACTCCCTTCAAGCTCAACCACCGCTCTCTCAAAATCTCCGCTTCCATCTCCAACCCTACTCAAAAAACCACTCCCATCCCCCCACCTCAACAATTCATTTCCCGATTTGCCCCTAACGAACCCCGAAAAGGCGCAGATATCCTCGTCGAAGCACTCGAACGTCAGGGAGTTACAAATGTCTTCGCTTACCCTGGCGGCGCTTCAATGGAAATTCATCAAGCACTCACGCGCTCCACCGCCATTCGTAACGTCCTCCCTCGTCACGAACAAGGTGGAATATTCGCTGCCGAGGGTTACGCTCGTTCCTCCGGTCTCCCTGGTGTCTGCATCGCCACTTCCGGCCCAGGTGCTACTAATCTCGTCAGTGGACTTGCTGATGCTATGCTTGACAGTGTTCCTCTTATTGCCATCACCGGTCAGGTTCCCCGGAGAATGATTGGTACTGATGCTTTTCAAGAAACTCCGATTGTTGAGGTAACTAGATCAATCACCAAGCATAATTATCTTGTTCTTGATGTTGATGATATACCTAGGATAGTGAATGAAGCGTTTTTATTAGCTTCTAGTGGTAGACCTGGACCTGTTTTGATCGATATACCTAAGGATATTCAGCAACAGGTTTCTGTTCCGAATTGGGATCAACCTATTAGGTTAACTGGGTATATGAATAGGTTACCCAAGGCACCGAAAGAGGCACATTTGGAACAGATTGTGAGGTTGTTATTGGAGTCTAAGAAACCTGTTTTGTATGTTGGTGGTGGTAGTTTGAATTGTAGCGAGGAATTGAGGCGGTTTGTTGAGTTAACCGGTGTACCTGTTGCTAGTACTTTGATGGGGTTGGGTTCCTATCCTAGTTCGGATGAGAATTCGTTGCAGATGCTTGGGATGCATGGGACTGTTTATGCTAATTATGCGGTTGATAAGAGTGATCTTTTGCTTGCGTTTGGGGTTAGGTTTGATGATCGGGTTACTGGGAAGCTTGAGGCTTTTGCGAGCCGGGCGAAGATTGTTCATATTGATATTGATGCTGCTGAGATTGGGAAGAATAAGCAGCCTCATGTGTCGGTTTGTGGGGATTTGAAGTTGGCTTTGAAGGGGATCAATCGAATTTTGGAGAGTAATGGGATAGAGAGTAAGCTTGATTTCGGAGGTTGGAGAGAAGAACTGAATGATCAGAAAGTTAGGTTTCCGATGAGTTATAAGAAGTTTGATGAAGCTATTCCTCCGCAGTATGCTATACAGGTTCTTGACGAGCTTACCAATGGGGAGGCTATCATAAGTACTGGTGTTGGACAACATCAGATGTGGGCTGCTCAGTTTTATAGGTACAAGAGACCGAGGCAGTGGTTGACTTCTGCTGGTCTTGGCGCTATGGGATTTGGATTGCCGGCTGCCATGGGAGCTGCTGTTGCCAATCCCGACGCTATTGTGGTTGACATCGATGGTGATGGAAGCTTTATGATGAATGTTCAGGAGTTGGCTACTATCAAGGTGGAGAATCTCCCTGTTAAGATATTGTTGTTGAACAATCAACACTTGGGTATGGTTGTCCAGTGGGAGGATCGGTTCTATAAAGCCAATAGAGCTCACACCTACCTGGGAGACCCAGCCAATGAGAAAGAAATATTCCCCAATATGTTGAAGTTTGCAGGTGCTTGTGGTATACCGGCAGCTCGTGTGACAAAGAGGGCAGACCTTAGAGCAGCGATTCAGAAAATGTTAGATACCCCTGGCCCCTACCTTCTTGATGTCATTGTACCGCATCAAGAGCATGTGTTGCCAATGATTCCTGCAAATGGATCCTTTGAGGATGTCATAACCGAGGGTGATGGCAGGATAAGTTACTGA
Protein sequence

>Msa1087870

MAATAAKTAFTTTISSSSPQSLPNQNHVFRITYPFSTSPNTPFKLNHRSLKISASISNPTQKTTPIPPPQQFISRFAPNEPRKGADILVEALERQGVTNVFAYPGGASMEIHQALTRSTAIRNVLPRHEQGGIFAAEGYARSSGLPGVCIATSGPGATNLVSGLADAMLDSVPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPRIVNEAFLLASSGRPGPVLIDIPKDIQQQVSVPNWDQPIRLTGYMNRLPKAPKEAHLEQIVRLLLESKKPVLYVGGGSLNCSEELRRFVELTGVPVASTLMGLGSYPSSDENSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDAAEIGKNKQPHVSVCGDLKLALKGINRILESNGIESKLDFGGWREELNDQKVRFPMSYKKFDEAIPPQYAIQVLDELTNGEAIISTGVGQHQMWAAQFYRYKRPRQWLTSAGLGAMGFGLPAAMGAAVANPDAIVVDIDGDGSFMMNVQELATIKVENLPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPANEKEIFPNMLKFAGACGIPAARVTKRADLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPANGSFEDVITEGDGRISY*