Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309000 | XP_003592947.3 | 93.875 | 751 | 16 | 7 | 1 | 727 | 1 | 745 | 0.0 | 1412 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309000 | sp|F4IH25|BOP1_ARATH | 61.126 | 746 | 250 | 8 | 2 | 726 | 27 | 753 | 0.0 | 904 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0188440 | Msa0309000 | 0.816565 | 5.179111e-52 | -8.615850e-47 |
| Msa0231030 | Msa0309000 | 0.889593 | 2.107207e-73 | -8.615850e-47 |
| Msa0309000 | Msa0528750 | 0.812081 | 5.072054e-51 | -8.615850e-47 |
| Msa0309000 | Msa0650370 | 0.809768 | 1.607493e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309000 | MtrunA17_Chr2g0277311 | 94.526 | 548 | 15 | 6 | 1 | 539 | 1 | 542 | 0.0 | 1025 |
| Msa0309000 | MtrunA17_Chr2g0277301 | 99.000 | 100 | 1 | 0 | 628 | 727 | 1 | 100 | 1.09e-69 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309000 | AT2G40360.1 | 61.126 | 746 | 250 | 8 | 2 | 726 | 27 | 753 | 0.0 | 904 |
| Msa0309000 | AT2G40360.2 | 60.724 | 746 | 236 | 9 | 2 | 726 | 27 | 736 | 0.0 | 893 |
Find 222 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTGTGGGATAAATTT+AGG | 0.098465 | 2_4:-3442679 | None:intergenic |
| TAACAATTGGGGAACAAAAT+TGG | 0.139168 | 2_4:-3446305 | None:intergenic |
| AACTCCCTCACCCCTAAATT+TGG | 0.153628 | 2_4:-3446354 | None:intergenic |
| GCCACTGTTATCCCAAATTT+AGG | 0.169146 | 2_4:+3446342 | Msa0309000:three_prime_UTR |
| GAAAGAAAGGGAAGACAAAT+TGG | 0.200648 | 2_4:+3440230 | Msa0309000:CDS |
| CCTTGATGTCATATCCAATA+TGG | 0.214290 | 2_4:-3440191 | None:intergenic |
| ACAACGTTGTTAATATCTTT+TGG | 0.224398 | 2_4:-3445772 | None:intergenic |
| AGCTTTGGCTTTAAAGATTC+AGG | 0.238489 | 2_4:-3443046 | None:intergenic |
| TATAAGGTTAAGGCATTTAA+AGG | 0.244291 | 2_4:+3443853 | Msa0309000:CDS |
| TCAATTTCTATTGAAGCTTC+AGG | 0.254166 | 2_4:+3443145 | Msa0309000:CDS |
| AAAGCTTTGTTGGTTTGATA+TGG | 0.264615 | 2_4:+3444851 | Msa0309000:CDS |
| TAAGAATCATCCTCCTTCTT+TGG | 0.272852 | 2_4:-3442391 | None:intergenic |
| ACTTACTTAAGAACTTTATA+TGG | 0.279811 | 2_4:-3444888 | None:intergenic |
| TTGGGCTCGTCTCGCTTATC+AGG | 0.283477 | 2_4:-3438825 | None:intergenic |
| GCCAAAGCTTCCAAATAAAA+AGG | 0.283788 | 2_4:+3443060 | Msa0309000:CDS |
| ACCTTTGTGGGATAAATTTA+GGG | 0.287084 | 2_4:-3442678 | None:intergenic |
| AAATCCTCTTATTGTTCCTT+TGG | 0.289726 | 2_4:+3445885 | Msa0309000:CDS |
| TTCAAAGTGGGAAGCTAAAA+AGG | 0.292304 | 2_4:+3442184 | Msa0309000:CDS |
| CTCTTGTGGGAAGATGATTC+TGG | 0.293595 | 2_4:+3442415 | Msa0309000:CDS |
| GATATGAATTAATCTCTTCT+TGG | 0.293648 | 2_4:-3442633 | None:intergenic |
| CAGCTTTCTGTTTAACAATT+GGG | 0.295383 | 2_4:-3446317 | None:intergenic |
| TACTCATTCATTCATTCATT+GGG | 0.296402 | 2_4:-3438843 | None:intergenic |
| TTGAAAAGTAGTCACCTTTC+CGG | 0.298992 | 2_4:-3443988 | None:intergenic |
| ATGAACCTTCGTTTGGGTTC+GGG | 0.309674 | 2_4:-3442158 | None:intergenic |
| TATTTGCATTGCAGGAATAT+TGG | 0.313865 | 2_4:+3446136 | Msa0309000:intron |
| AAAATTGGGAATAGAGTTAC+AGG | 0.314181 | 2_4:-3446290 | None:intergenic |
| CCAGTCTCATCTGATGCTTC+TGG | 0.319072 | 2_4:-3443609 | None:intergenic |
| ATGATAAACACGATGGTATA+AGG | 0.329604 | 2_4:+3443837 | Msa0309000:CDS |
| TCAGCTTTCTGTTTAACAAT+TGG | 0.333490 | 2_4:-3446318 | None:intergenic |
| TTACTCATTCATTCATTCAT+TGG | 0.338923 | 2_4:-3438844 | None:intergenic |
| TATTCGATATAGCATGTTAT+GGG | 0.338942 | 2_4:-3443097 | None:intergenic |
| CTTCTGTTCAACACTGGTTT+GGG | 0.343502 | 2_4:+3443537 | Msa0309000:CDS |
| AACAATTGGGGAACAAAATT+GGG | 0.349363 | 2_4:-3446304 | None:intergenic |
| AGAAGAACAGCAAAGGATTA+AGG | 0.351258 | 2_4:+3443566 | Msa0309000:CDS |
| TGAAGGAATGAACCTTCGTT+TGG | 0.352971 | 2_4:-3442165 | None:intergenic |
| ATATTCGATATAGCATGTTA+TGG | 0.356240 | 2_4:-3443098 | None:intergenic |
| AAAAGATAAAGAAGAAAGAA+AGG | 0.359734 | 2_4:+3440217 | Msa0309000:CDS |
| TCAGGGCAGTGGATGGCTTC+AGG | 0.362455 | 2_4:+3443163 | Msa0309000:CDS |
| TTTCCCATTAACAAAACTAT+AGG | 0.362557 | 2_4:-3446381 | None:intergenic |
| TGTAAATAACCAGGGTTGCC+TGG | 0.363124 | 2_4:-3446174 | None:intergenic |
| ACTTCTGTTCAACACTGGTT+TGG | 0.364653 | 2_4:+3443536 | Msa0309000:CDS |
| AATGAACCTTCGTTTGGGTT+CGG | 0.364933 | 2_4:-3442159 | None:intergenic |
| CCACTGTTATCCCAAATTTA+GGG | 0.371496 | 2_4:+3446343 | Msa0309000:three_prime_UTR |
| ACATGCTATATCGAATATAA+AGG | 0.374460 | 2_4:+3443103 | Msa0309000:CDS |
| GCACCAAAGCAGAAACTTCC+TGG | 0.381658 | 2_4:+3442475 | Msa0309000:CDS |
| TTGATGTAACTGCACCTTCA+TGG | 0.388375 | 2_4:-3443126 | None:intergenic |
| CGGGGCCATGCAAATTCAAA+TGG | 0.388895 | 2_4:+3445916 | Msa0309000:CDS |
| GAATTAATCTCTTCTTGGGT+TGG | 0.389942 | 2_4:-3442628 | None:intergenic |
| GCGCAAACTAATGCAGAATA+AGG | 0.393235 | 2_4:+3441937 | Msa0309000:CDS |
| TACCTCTTCATCTTCGGAAA+TGG | 0.393338 | 2_4:-3439105 | None:intergenic |
| TGCCGGGTACAACAAATTCC+TGG | 0.394882 | 2_4:-3446456 | None:intergenic |
| ATATGAATTAATCTCTTCTT+GGG | 0.401613 | 2_4:-3442632 | None:intergenic |
| ATCATCAACATTTGCAAGAA+AGG | 0.402378 | 2_4:-3440256 | None:intergenic |
| TTGTTCCTTTGGAAATTCTA+CGG | 0.403370 | 2_4:+3445896 | Msa0309000:CDS |
| CAACCCTGGTTATTTACAGC+TGG | 0.404320 | 2_4:+3446179 | Msa0309000:CDS |
| GTGATGGAACTGTCCGTGTC+TGG | 0.404605 | 2_4:+3443273 | Msa0309000:CDS |
| CTCTCCCATTTGAATTTGCA+TGG | 0.409359 | 2_4:-3445921 | None:intergenic |
| GACAAAAGATGAAATCAAAA+TGG | 0.410244 | 2_4:+3441913 | Msa0309000:CDS |
| ATTTCCAAAGGAACAATAAG+AGG | 0.410944 | 2_4:-3445889 | None:intergenic |
| CTTGATGTCATATCCAATAT+GGG | 0.413782 | 2_4:-3440190 | None:intergenic |
| ATACCAGGAAGTTTCTGCTT+TGG | 0.424563 | 2_4:-3442478 | None:intergenic |
| ACTCCCTCACCCCTAAATTT+GGG | 0.428225 | 2_4:-3446353 | None:intergenic |
| ATGTTGATGATTCTAAGAAT+TGG | 0.428284 | 2_4:+3440268 | Msa0309000:CDS |
| GAAGGAATGAACCTTCGTTT+GGG | 0.436375 | 2_4:-3442164 | None:intergenic |
| GTGAGAGTTTCTTGGACAAC+TGG | 0.437387 | 2_4:-3444511 | None:intergenic |
| TTCCTCTTTCTTCTTCATCT+CGG | 0.439715 | 2_4:-3439006 | None:intergenic |
| ATATAGCATGTTATGGGGTA+AGG | 0.441338 | 2_4:-3443091 | None:intergenic |
| GAAGCTGACCTCCTCGTCTT+GGG | 0.442155 | 2_4:-3439343 | None:intergenic |
| TTAATTGTGGGGAGCAAAGA+AGG | 0.442713 | 2_4:+3444828 | Msa0309000:CDS |
| GCAAAGAAGGAAAGCTTTGT+TGG | 0.443901 | 2_4:+3444841 | Msa0309000:CDS |
| TGTTCCTTTGGAAATTCTAC+GGG | 0.444924 | 2_4:+3445897 | Msa0309000:CDS |
| TATGAGGATGAACCCCATAT+TGG | 0.445423 | 2_4:+3440177 | Msa0309000:CDS |
| GTAAATAACCAGGGTTGCCT+GGG | 0.445737 | 2_4:-3446173 | None:intergenic |
| CGTGTCTGGGAGGTTGAAAC+TGG | 0.447803 | 2_4:+3443287 | Msa0309000:CDS |
| CTGGCAGATGTCTGAGACAG+TGG | 0.448817 | 2_4:+3443306 | Msa0309000:CDS |
| AACACGATGGTATAAGGTTA+AGG | 0.454384 | 2_4:+3443843 | Msa0309000:CDS |
| CTTTGTACAAATAAAGAAGA+TGG | 0.456986 | 2_4:-3444594 | None:intergenic |
| ATTATGTTGAGTGGTTCAAA+TGG | 0.460094 | 2_4:+3442105 | Msa0309000:CDS |
| TTCTGACTTTGATCCACATC+CGG | 0.460539 | 2_4:+3441967 | Msa0309000:CDS |
| AAACTTCCTTTCAAGTTACA+TGG | 0.460764 | 2_4:+3444536 | Msa0309000:CDS |
| AAAGATAAAGAAGAAAGAAA+GGG | 0.466560 | 2_4:+3440218 | Msa0309000:CDS |
| AATGAATGAATGAATGAGTA+AGG | 0.467634 | 2_4:+3438846 | Msa0309000:five_prime_UTR |
| GGATGATTCTTATCTCTTGT+GGG | 0.469629 | 2_4:+3442402 | Msa0309000:CDS |
| TGAAAGCTCCGATCTTCATC+AGG | 0.471911 | 2_4:+3439973 | Msa0309000:CDS |
| GGAAGTTTCTGCTTTGGTGC+AGG | 0.474613 | 2_4:-3442472 | None:intergenic |
| GCAGGTGATAATTTAATTGT+GGG | 0.476821 | 2_4:+3444816 | Msa0309000:intron |
| TGGGTTGGAATATACTCTAA+AGG | 0.478484 | 2_4:-3442613 | None:intergenic |
| TGAAGCTGACCTCCTCGTCT+TGG | 0.479040 | 2_4:-3439344 | None:intergenic |
| CAATTTCTATTGAAGCTTCA+GGG | 0.480377 | 2_4:+3443146 | Msa0309000:CDS |
| AGGATGATTCTTATCTCTTG+TGG | 0.482043 | 2_4:+3442401 | Msa0309000:CDS |
| GTATGGTAATTGATAATGAT+TGG | 0.482433 | 2_4:+3446599 | Msa0309000:three_prime_UTR |
| TCGTCAATTGCAGTCCATCC+TGG | 0.485324 | 2_4:+3444689 | Msa0309000:CDS |
| TGCAGGTGATAATTTAATTG+TGG | 0.485837 | 2_4:+3444815 | Msa0309000:intron |
| CTATTGAAGCTTCAGGGCAG+TGG | 0.486682 | 2_4:+3443152 | Msa0309000:CDS |
| AAGTAAATACAGACCGGATG+TGG | 0.489461 | 2_4:-3441980 | None:intergenic |
| TTTGTGAAACTAGCTAAGCT+AGG | 0.490772 | 2_4:-3438891 | None:intergenic |
| GAAGAAGAAGAAGGTGAGAG+AGG | 0.493057 | 2_4:-3438937 | None:intergenic |
| GGATGATACCTCTTCATCTT+CGG | 0.493753 | 2_4:-3439111 | None:intergenic |
| GAGGGTTTAAGACACAGGTT+TGG | 0.494391 | 2_4:-3438918 | None:intergenic |
| TTCTTGATCATTTAGGCGGA+AGG | 0.494928 | 2_4:+3441856 | Msa0309000:intron |
| AACCCTGGTTATTTACAGCT+GGG | 0.495621 | 2_4:+3446180 | Msa0309000:CDS |
| AAGCTGTGAACTGTGTTACT+TGG | 0.496069 | 2_4:+3443339 | Msa0309000:CDS |
| CAGGTTGTGCAGTATGTTAG+AGG | 0.496768 | 2_4:+3442337 | Msa0309000:intron |
| GTCATCGGAGTCGTCGTCAT+CGG | 0.502887 | 2_4:-3439057 | None:intergenic |
| AAAGAAAGGGAAGACAAATT+GGG | 0.504818 | 2_4:+3440231 | Msa0309000:CDS |
| ATGAAAGCACAGTACCTTTG+TGG | 0.506407 | 2_4:-3442691 | None:intergenic |
| TGAGAGAGGGTTTAAGACAC+AGG | 0.511770 | 2_4:-3438923 | None:intergenic |
| TTGTACAATGGTGTTATGAA+AGG | 0.514108 | 2_4:-3446629 | None:intergenic |
| TGCGTTAGACAATGGATGCT+TGG | 0.517477 | 2_4:-3442135 | None:intergenic |
| TTATCCCAAATTTAGGGGTG+AGG | 0.519078 | 2_4:+3446349 | Msa0309000:three_prime_UTR |
| ATCTGAGCACGAAGCAAACA+AGG | 0.519889 | 2_4:-3445812 | None:intergenic |
| TTGTGAAACTAGCTAAGCTA+GGG | 0.523162 | 2_4:-3438890 | None:intergenic |
| TCATCCTCATACCACTTCAA+AGG | 0.523812 | 2_4:-3440165 | None:intergenic |
| AAGAAGAAGAAGGTGAGAGA+GGG | 0.524337 | 2_4:-3438936 | None:intergenic |
| TTCATAGCATTGTCATACGC+AGG | 0.524375 | 2_4:-3442796 | None:intergenic |
| TGCGTATGACAATGCTATGA+AGG | 0.524552 | 2_4:+3442798 | Msa0309000:CDS |
| AGCCCCAGCTGTAAATAACC+AGG | 0.525330 | 2_4:-3446183 | None:intergenic |
| CCATATTGGATATGACATCA+AGG | 0.525475 | 2_4:+3440191 | Msa0309000:CDS |
| CATCCTCATACCACTTCAAA+GGG | 0.526557 | 2_4:-3440164 | None:intergenic |
| ACCTCTCCAATGGTATTTCG+AGG | 0.527431 | 2_4:-3440141 | None:intergenic |
| AGCTTTCTGTTTAACAATTG+GGG | 0.527891 | 2_4:-3446316 | None:intergenic |
| ATTGTAGGACGTTGATGACT+CGG | 0.530821 | 2_4:+3439940 | Msa0309000:intron |
| CTTTATATGGTTTAGACGAA+AGG | 0.531394 | 2_4:-3444875 | None:intergenic |
| GGTCCCTTTGAAGTGGTATG+AGG | 0.533326 | 2_4:+3440161 | Msa0309000:CDS |
| CCCAGAAAGAAAACATCCAT+CGG | 0.533440 | 2_4:-3446558 | None:intergenic |
| TGACGAGGCTTCTTTGAGAC+CGG | 0.534532 | 2_4:-3444672 | None:intergenic |
| TGAAAGCACAGTACCTTTGT+GGG | 0.534624 | 2_4:-3442690 | None:intergenic |
| GGTTCGGGTGCGTTAGACAA+TGG | 0.536640 | 2_4:-3442143 | None:intergenic |
| GAGGATTATATGACTCATCA+TGG | 0.537199 | 2_4:-3442591 | None:intergenic |
| TGTCTGAGACAGTGGGAGAT+TGG | 0.541054 | 2_4:+3443314 | Msa0309000:CDS |
| ATCGAATATAAAGGCCATGA+AGG | 0.541999 | 2_4:+3443112 | Msa0309000:CDS |
| TCTTTAAGCCAGCGTACACT+AGG | 0.542961 | 2_4:-3443815 | None:intergenic |
| TCCTCCTTCCTGATGAAGAT+CGG | 0.543589 | 2_4:-3439981 | None:intergenic |
| CATGCAGAATGTTACTTCTG+TGG | 0.543641 | 2_4:+3443958 | Msa0309000:intron |
| GAGTGATTCATCTGAGGATG+AGG | 0.544074 | 2_4:+3440012 | Msa0309000:CDS |
| AATGTGACGTGGAGTTGGTA+TGG | 0.545186 | 2_4:+3446582 | Msa0309000:three_prime_UTR |
| AGAAGATGGAACGAGATGGA+TGG | 0.545362 | 2_4:-3444580 | None:intergenic |
| TACCAGGAATTTGTTGTACC+CGG | 0.547337 | 2_4:+3446454 | Msa0309000:three_prime_UTR |
| TTCTTTGAAGTTGAAATACC+AGG | 0.547458 | 2_4:+3446438 | Msa0309000:three_prime_UTR |
| TTCCATTTCCGAAGATGAAG+AGG | 0.549861 | 2_4:+3439103 | Msa0309000:CDS |
| AGTTTCACCCCAGGCAACCC+TGG | 0.550056 | 2_4:+3446165 | Msa0309000:CDS |
| GGAAACTTCAACACTGTCAT+CGG | 0.555060 | 2_4:-3439072 | None:intergenic |
| TCTGAATTAGAACATGAAGA+AGG | 0.558879 | 2_4:+3439261 | Msa0309000:CDS |
| GTTTAAGACACAGGTTTGGT+TGG | 0.561495 | 2_4:-3438914 | None:intergenic |
| GCAAGTCCATGTAACTTGAA+AGG | 0.563238 | 2_4:-3444542 | None:intergenic |
| GTGGCTCCTCGAAATACCAT+TGG | 0.564896 | 2_4:+3440135 | Msa0309000:CDS |
| GGGGCCATGCAAATTCAAAT+GGG | 0.565061 | 2_4:+3445917 | Msa0309000:CDS |
| TATCCCAAATTTAGGGGTGA+GGG | 0.566083 | 2_4:+3446350 | Msa0309000:three_prime_UTR |
| TCATGATCAGATGGAGGCGG+CGG | 0.566388 | 2_4:-3439032 | None:intergenic |
| TTACTTCTGTGGAATGGCAC+CGG | 0.567545 | 2_4:+3443969 | Msa0309000:CDS |
| TGGGAAATGTGACGTGGAGT+TGG | 0.568365 | 2_4:+3446577 | Msa0309000:three_prime_UTR |
| TGAAGCTTCAGGGCAGTGGA+TGG | 0.570556 | 2_4:+3443156 | Msa0309000:CDS |
| CCAGAAGCATCAGATGAGAC+TGG | 0.571285 | 2_4:+3443609 | Msa0309000:CDS |
| ACTACTACTACTCATCATCA+TGG | 0.575631 | 2_4:+3439300 | Msa0309000:CDS |
| GATGGAACGAGATGGATGGA+AGG | 0.576040 | 2_4:-3444576 | None:intergenic |
| ACCCTGGTTATTTACAGCTG+GGG | 0.577398 | 2_4:+3446181 | Msa0309000:CDS |
| TTATGTTGAGTGGTTCAAAT+GGG | 0.579837 | 2_4:+3442106 | Msa0309000:CDS |
| CATATTGGATATGACATCAA+GGG | 0.580562 | 2_4:+3440192 | Msa0309000:CDS |
| GATGTACTTCTGTTCAACAC+TGG | 0.585057 | 2_4:+3443531 | Msa0309000:CDS |
| GAAGGTTCATTCCTTCAAAG+TGG | 0.585876 | 2_4:+3442171 | Msa0309000:CDS |
| AAGGTTCATTCCTTCAAAGT+GGG | 0.586722 | 2_4:+3442172 | Msa0309000:CDS |
| TTCGGAAATGGAATCGTAGT+CGG | 0.588585 | 2_4:-3439093 | None:intergenic |
| TCTGTCTGATATTCATATTG+TGG | 0.589903 | 2_4:+3443367 | Msa0309000:CDS |
| TCATCGGAATCATGATCAGA+TGG | 0.590859 | 2_4:-3439041 | None:intergenic |
| TGGACTGCAAGTTTCACCCC+AGG | 0.591777 | 2_4:+3446156 | Msa0309000:CDS |
| TGAGTACAATGATGAGGAAG+TGG | 0.592725 | 2_4:+3441886 | Msa0309000:CDS |
| TTGGAGAGGTCCCTTTGAAG+TGG | 0.595478 | 2_4:+3440154 | Msa0309000:CDS |
| TGATGGAACTGTCCGTGTCT+GGG | 0.597835 | 2_4:+3443274 | Msa0309000:CDS |
| CACTGTTATCCCAAATTTAG+GGG | 0.601906 | 2_4:+3446344 | Msa0309000:three_prime_UTR |
| GATCTTCATCAGGAAGGAGG+AGG | 0.602770 | 2_4:+3439983 | Msa0309000:CDS |
| GACGTTGATGACTCGGAAGG+TGG | 0.608124 | 2_4:+3439947 | Msa0309000:CDS |
| AATGAATGAATGAGTAAGGG+TGG | 0.610173 | 2_4:+3438850 | Msa0309000:five_prime_UTR |
| CATGCAAATTCAAATGGGAG+AGG | 0.611790 | 2_4:+3445922 | Msa0309000:CDS |
| AGCCGAGATGAAGAAGAAAG+AGG | 0.612426 | 2_4:+3439004 | Msa0309000:CDS |
| CTTCAAAGGGACCTCTCCAA+TGG | 0.612908 | 2_4:-3440151 | None:intergenic |
| TAATAACAATACCTCCAGGA+TGG | 0.614469 | 2_4:-3444703 | None:intergenic |
| ATAAAGAAGATGGAACGAGA+TGG | 0.615602 | 2_4:-3444584 | None:intergenic |
| TCTGTGGAATGGCACCGGAA+AGG | 0.618310 | 2_4:+3443974 | Msa0309000:CDS |
| TCATAGCATTGTCATACGCA+GGG | 0.620700 | 2_4:-3442795 | None:intergenic |
| AAACCAGACTTACGCAGAGA+CGG | 0.621759 | 2_4:-3443390 | None:intergenic |
| TGGCAGATGTCTGAGACAGT+GGG | 0.626311 | 2_4:+3443307 | Msa0309000:CDS |
| CAGTTTCAACCTCCCAGACA+CGG | 0.626919 | 2_4:-3443286 | None:intergenic |
| AGCTCCGATCTTCATCAGGA+AGG | 0.628030 | 2_4:+3439977 | Msa0309000:CDS |
| GAATCATGATCAGATGGAGG+CGG | 0.628111 | 2_4:-3439035 | None:intergenic |
| TATGTTAGAGGAATTCGCAA+TGG | 0.631262 | 2_4:+3442349 | Msa0309000:CDS |
| CAGGTGATAATTTAATTGTG+GGG | 0.633645 | 2_4:+3444817 | Msa0309000:intron |
| GTTGGAATATACTCTAAAGG+AGG | 0.636366 | 2_4:-3442610 | None:intergenic |
| TCCGATCTTCATCAGGAAGG+AGG | 0.636888 | 2_4:+3439980 | Msa0309000:CDS |
| ATATTGGATATGACATCAAG+GGG | 0.637046 | 2_4:+3440193 | Msa0309000:CDS |
| TCCTCGAAATACCATTGGAG+AGG | 0.637496 | 2_4:+3440140 | Msa0309000:CDS |
| CAATTCTGACTCCCAAGACG+AGG | 0.643332 | 2_4:+3439332 | Msa0309000:CDS |
| TGAATGAGTAAGGGTGGGTG+CGG | 0.647573 | 2_4:+3438856 | Msa0309000:five_prime_UTR |
| AGAAAGCACCTAGTGTACGC+TGG | 0.647760 | 2_4:+3443807 | Msa0309000:CDS |
| TCTTTCTGGGAAATGTGACG+TGG | 0.650218 | 2_4:+3446571 | Msa0309000:three_prime_UTR |
| ATTCGATATAGCATGTTATG+GGG | 0.653568 | 2_4:-3443096 | None:intergenic |
| TTGGGAGTCAGAATTGTCGT+CGG | 0.654239 | 2_4:-3439325 | None:intergenic |
| TTCTGACTCCCAAGACGAGG+AGG | 0.656012 | 2_4:+3439335 | Msa0309000:CDS |
| ATGAATGAATGAATGAGTAA+GGG | 0.657063 | 2_4:+3438847 | Msa0309000:five_prime_UTR |
| TTGATGTCATATCCAATATG+GGG | 0.658360 | 2_4:-3440189 | None:intergenic |
| CTTTGATGAGTACAATGATG+AGG | 0.661806 | 2_4:+3441880 | Msa0309000:CDS |
| GTGATGAAGAAGAACAGCAA+AGG | 0.662428 | 2_4:+3443559 | Msa0309000:CDS |
| ATGTGCAGGATTATGTTGAG+TGG | 0.665536 | 2_4:+3442096 | Msa0309000:intron |
| CCCTAAATTTGGGATAACAG+TGG | 0.669448 | 2_4:-3446343 | None:intergenic |
| CTTAAAGATGATAAACACGA+TGG | 0.672298 | 2_4:+3443830 | Msa0309000:CDS |
| AGGATGGACTGCAATTGACG+AGG | 0.675101 | 2_4:-3444687 | None:intergenic |
| AGAATGTTACTTCTGTGGAA+TGG | 0.676838 | 2_4:+3443963 | Msa0309000:intron |
| TGCTGAGAGTGATTCATCTG+AGG | 0.679468 | 2_4:+3440006 | Msa0309000:CDS |
| TCGGAATCATGATCAGATGG+AGG | 0.680487 | 2_4:-3439038 | None:intergenic |
| GCCCCAGCTGTAAATAACCA+GGG | 0.684465 | 2_4:-3446182 | None:intergenic |
| ACAATATGAATATCAGACAG+AGG | 0.684612 | 2_4:-3443365 | None:intergenic |
| TAGGACGTTGATGACTCGGA+AGG | 0.686071 | 2_4:+3439944 | Msa0309000:intron |
| TGGCCCCGTAGAATTTCCAA+AGG | 0.689804 | 2_4:-3445901 | None:intergenic |
| TAAATAACCAGGGTTGCCTG+GGG | 0.690591 | 2_4:-3446172 | None:intergenic |
| GCCCTAAATTTATCCCACAA+AGG | 0.699342 | 2_4:+3442677 | Msa0309000:CDS |
| ACGCACCCGAACCCAAACGA+AGG | 0.702076 | 2_4:+3442153 | Msa0309000:CDS |
| TTTGTGGGATAAATTTAGGG+CGG | 0.703720 | 2_4:-3442675 | None:intergenic |
| TCTGAGCACGAAGCAAACAA+GGG | 0.712455 | 2_4:-3445811 | None:intergenic |
| ATGAATGAATGAGTAAGGGT+GGG | 0.713050 | 2_4:+3438851 | Msa0309000:five_prime_UTR |
| TGTGGATCAAAGTCAGAATG+TGG | 0.716263 | 2_4:-3441962 | None:intergenic |
| TGGAACTGTCCGTGTCTGGG+AGG | 0.720097 | 2_4:+3443277 | Msa0309000:CDS |
| TCAATTGCAGTCCATCCTGG+AGG | 0.730857 | 2_4:+3444692 | Msa0309000:CDS |
| GTTCCTTTGGAAATTCTACG+GGG | 0.734441 | 2_4:+3445898 | Msa0309000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATGTTTATAATCA+AGG | - | chr2_4:3443416-3443435 | None:intergenic | 10.0% |
| !!! | TATAATTAAAATTTTAGTTG+GGG | - | chr2_4:3443728-3443747 | None:intergenic | 10.0% |
| !!! | CTATAATTAAAATTTTAGTT+GGG | - | chr2_4:3443729-3443748 | None:intergenic | 10.0% |
| !!! | TCTATAATTAAAATTTTAGT+TGG | - | chr2_4:3443730-3443749 | None:intergenic | 10.0% |
| !! | TTTAAAAAATTGTTTATATG+AGG | - | chr2_4:3444356-3444375 | None:intergenic | 10.0% |
| !!! | ATTTATCAAAATATTTTTAG+TGG | - | chr2_4:3446235-3446254 | None:intergenic | 10.0% |
| !!! | TACAATTTTTTTGTAATATT+TGG | + | chr2_4:3446647-3446666 | Msa0309000:three_prime_UTR | 10.0% |
| !! | TAAACAAAGTTAAATAGTTT+GGG | - | chr2_4:3439755-3439774 | None:intergenic | 15.0% |
| !! | TTAAACAAAGTTAAATAGTT+TGG | - | chr2_4:3439756-3439775 | None:intergenic | 15.0% |
| !! | AACTTCTAATCATATATAAA+AGG | + | chr2_4:3440902-3440921 | Msa0309000:intron | 15.0% |
| !!! | GAAATTTCTAAAAATATTGT+TGG | - | chr2_4:3441526-3441545 | None:intergenic | 15.0% |
| !!! | ACAATATTTTTAGAAATTTC+AGG | + | chr2_4:3441526-3441545 | Msa0309000:intron | 15.0% |
| !!! | AGTATTTTAAATTTTTCAGT+CGG | + | chr2_4:3441674-3441693 | Msa0309000:intron | 15.0% |
| !!! | AGTATTTTAAATTTTTCAGT+CGG | + | chr2_4:3441674-3441693 | Msa0309000:intron | 15.0% |
| !!! | TAATATTACCTTTTCTTTTT+CGG | + | chr2_4:3442531-3442550 | Msa0309000:intron | 15.0% |
| !!! | AATTTTAATTATAGAAAAGC+AGG | + | chr2_4:3443735-3443754 | Msa0309000:intron | 15.0% |
| !! | AAACAAAGAAAGTAAAAAAA+AGG | - | chr2_4:3445095-3445114 | None:intergenic | 15.0% |
| !! | ACAATAAAAAAAAAAAGTCA+AGG | - | chr2_4:3445144-3445163 | None:intergenic | 15.0% |
| !!! | CTTTTTTATCATTCAAATAA+AGG | - | chr2_4:3445267-3445286 | None:intergenic | 15.0% |
| !!! | CTTTATTTGAATGATAAAAA+AGG | + | chr2_4:3445265-3445284 | Msa0309000:intron | 15.0% |
| !! | AATTCTAATTACAAATATGT+CGG | - | chr2_4:3445386-3445405 | None:intergenic | 15.0% |
| !!! | TTTATTTTTCCTTTAGTTTA+TGG | + | chr2_4:3445460-3445479 | Msa0309000:intron | 15.0% |
| !! | TTAAAATATTGTCTGATATT+TGG | + | chr2_4:3445977-3445996 | Msa0309000:intron | 15.0% |
| !! | ATTACAAAAAAATTGTACAA+TGG | - | chr2_4:3446644-3446663 | None:intergenic | 15.0% |
| !! | TATAAAACTTAACTACTCAT+GGG | - | chr2_4:3439700-3439719 | None:intergenic | 20.0% |
| !! | TTATAAAACTTAACTACTCA+TGG | - | chr2_4:3439701-3439720 | None:intergenic | 20.0% |
| !! | CTATTATGATATCTATAACT+AGG | + | chr2_4:3439866-3439885 | Msa0309000:intron | 20.0% |
| !! | TGTTCAAAATCAATTATTGT+AGG | + | chr2_4:3439925-3439944 | Msa0309000:intron | 20.0% |
| !! | AATTCCCATTTATATTACTA+TGG | + | chr2_4:3440074-3440093 | Msa0309000:intron | 20.0% |
| !! | AAAAGATAAAGAAGAAAGAA+AGG | + | chr2_4:3440217-3440236 | Msa0309000:CDS | 20.0% |
| !! | AAAGATAAAGAAGAAAGAAA+GGG | + | chr2_4:3440218-3440237 | Msa0309000:CDS | 20.0% |
| !! | AAAGAATGCAATAATGAAAA+TGG | - | chr2_4:3440333-3440352 | None:intergenic | 20.0% |
| !! | TTATCATCAAATGATGTAAA+CGG | - | chr2_4:3440694-3440713 | None:intergenic | 20.0% |
| !!! | ATCATTGAATAATTTGTCTT+AGG | + | chr2_4:3441425-3441444 | Msa0309000:intron | 20.0% |
| !! | GAAAAAAAGTAAACACAAAT+TGG | - | chr2_4:3441574-3441593 | None:intergenic | 20.0% |
| !! | TGTGAAATAATATCACAATA+GGG | - | chr2_4:3441792-3441811 | None:intergenic | 20.0% |
| !! | TTGTGAAATAATATCACAAT+AGG | - | chr2_4:3441793-3441812 | None:intergenic | 20.0% |
| !! | ATTGTGATATTATTTCACAA+TGG | + | chr2_4:3441793-3441812 | Msa0309000:intron | 20.0% |
| !!! | TAATTTGAAATAAGTCGATT+AGG | + | chr2_4:3442236-3442255 | Msa0309000:intron | 20.0% |
| !! | AAGGAAATTATTAACATCAA+AGG | - | chr2_4:3442559-3442578 | None:intergenic | 20.0% |
| !! | ATATGAATTAATCTCTTCTT+GGG | - | chr2_4:3442635-3442654 | None:intergenic | 20.0% |
| !! | AGTAAATCAGTTCTTTAATA+CGG | - | chr2_4:3442892-3442911 | None:intergenic | 20.0% |
| !!! | GATGTTAATAGTGAATATTT+TGG | + | chr2_4:3443192-3443211 | Msa0309000:intron | 20.0% |
| !! | AGCTAATAAATCAACAATAA+AGG | - | chr2_4:3444033-3444052 | None:intergenic | 20.0% |
| !!! | GTTGATTTATTAGCTAATAA+TGG | + | chr2_4:3444038-3444057 | Msa0309000:intron | 20.0% |
| !! | AATAACAATAATGCACTTAA+AGG | + | chr2_4:3444117-3444136 | Msa0309000:intron | 20.0% |
| !!! | TTAGCTGATTTTTTATCTTA+AGG | + | chr2_4:3444397-3444416 | Msa0309000:intron | 20.0% |
| !! | TATCTTAAGGAAAATTTATG+AGG | + | chr2_4:3444410-3444429 | Msa0309000:intron | 20.0% |
| !! | ACTTACTTAAGAACTTTATA+TGG | - | chr2_4:3444891-3444910 | None:intergenic | 20.0% |
| !! | TGTATAATTTAATCTGCATA+GGG | - | chr2_4:3444975-3444994 | None:intergenic | 20.0% |
| !! | TAAATACAAAGTCAAACTTA+AGG | - | chr2_4:3445444-3445463 | None:intergenic | 20.0% |
| !!! | TATCTATCATTGATTCATTT+TGG | + | chr2_4:3445512-3445531 | Msa0309000:intron | 20.0% |
| !! | TTGAAAAAAGACTACTAAAA+AGG | + | chr2_4:3445572-3445591 | Msa0309000:intron | 20.0% |
| !!! | AACTTGTTATAAAAAATCTG+TGG | - | chr2_4:3445732-3445751 | None:intergenic | 20.0% |
| !!! | TGTTTTTGATTTTGTTAACT+TGG | + | chr2_4:3445954-3445973 | Msa0309000:intron | 20.0% |
| ! | TACTCATTCATTCATTCATT+GGG | - | chr2_4:3438846-3438865 | None:intergenic | 25.0% |
| ! | TTACTCATTCATTCATTCAT+TGG | - | chr2_4:3438847-3438866 | None:intergenic | 25.0% |
| ! | AATGAATGAATGAATGAGTA+AGG | + | chr2_4:3438846-3438865 | Msa0309000:five_prime_UTR | 25.0% |
| ! | ATGAATGAATGAATGAGTAA+GGG | + | chr2_4:3438847-3438866 | Msa0309000:five_prime_UTR | 25.0% |
| ! | TATAGATATCATAATAGCAG+AGG | - | chr2_4:3439863-3439882 | None:intergenic | 25.0% |
| ! | TTATGATATCTATAACTAGG+AGG | + | chr2_4:3439869-3439888 | Msa0309000:intron | 25.0% |
| ! | ATAGAAAAAGAACAACAACA+CGG | - | chr2_4:3439896-3439915 | None:intergenic | 25.0% |
| !! | TAATTATAATGATGACGAAG+AGG | - | chr2_4:3440042-3440061 | None:intergenic | 25.0% |
| ! | AGGTCCATAGTAATATAAAT+GGG | - | chr2_4:3440081-3440100 | None:intergenic | 25.0% |
| !!! | ATGTTGATGATTCTAAGAAT+TGG | + | chr2_4:3440268-3440287 | Msa0309000:CDS | 25.0% |
| ! | TGCATATATCTGTAATACAT+TGG | + | chr2_4:3440478-3440497 | Msa0309000:intron | 25.0% |
| ! | TATCATCAAATGATGTAAAC+GGG | - | chr2_4:3440693-3440712 | None:intergenic | 25.0% |
| ! | GTTTACCAAAAAAACAATGA+TGG | + | chr2_4:3441116-3441135 | Msa0309000:intron | 25.0% |
| !!! | TTCATCCATCATTGTTTTTT+TGG | - | chr2_4:3441124-3441143 | None:intergenic | 25.0% |
| ! | TATGTAATCAACTCTTTAAC+TGG | - | chr2_4:3441206-3441225 | None:intergenic | 25.0% |
| !! | TTAAAGAGTTGATTACATAC+AGG | + | chr2_4:3441207-3441226 | Msa0309000:intron | 25.0% |
| ! | TATGTAATCAACTCTTTAAC+TGG | - | chr2_4:3441206-3441225 | None:intergenic | 25.0% |
| ! | TCTTTATAATAGCCTAACAT+GGG | - | chr2_4:3441388-3441407 | None:intergenic | 25.0% |
| ! | TTCTTTATAATAGCCTAACA+TGG | - | chr2_4:3441389-3441408 | None:intergenic | 25.0% |
| ! | ATTTGTCTTAGGAACATAAT+TGG | + | chr2_4:3441436-3441455 | Msa0309000:intron | 25.0% |
| ! | TAAAAATATTGTTGGTACAC+TGG | - | chr2_4:3441518-3441537 | None:intergenic | 25.0% |
| !! | TACTGAAATCATGACTATTT+TGG | - | chr2_4:3441658-3441677 | None:intergenic | 25.0% |
| ! | GTGAAATAATATCACAATAG+GGG | - | chr2_4:3441791-3441810 | None:intergenic | 25.0% |
| !! | GCTTTTATTCTTGATCATTT+AGG | + | chr2_4:3441849-3441868 | Msa0309000:intron | 25.0% |
| ! | TTTATTCTTGATCATTTAGG+CGG | + | chr2_4:3441852-3441871 | Msa0309000:intron | 25.0% |
| ! | GACAAAAGATGAAATCAAAA+TGG | + | chr2_4:3441913-3441932 | Msa0309000:CDS | 25.0% |
| !!! | TTTTGAAACTCAATTAGCAT+GGG | + | chr2_4:3442044-3442063 | Msa0309000:intron | 25.0% |
| ! | ACAAAACAGATATGCATTTA+AGG | - | chr2_4:3442075-3442094 | None:intergenic | 25.0% |
| !! | ATAATTTCCTTTTACTTCTC+AGG | + | chr2_4:3442568-3442587 | Msa0309000:intron | 25.0% |
| ! | GATATGAATTAATCTCTTCT+TGG | - | chr2_4:3442636-3442655 | None:intergenic | 25.0% |
| ! | AATAATACATTTCAATTGCC+AGG | + | chr2_4:3442752-3442771 | Msa0309000:intron | 25.0% |
| ! | TATTCGATATAGCATGTTAT+GGG | - | chr2_4:3443100-3443119 | None:intergenic | 25.0% |
| ! | ATATTCGATATAGCATGTTA+TGG | - | chr2_4:3443101-3443120 | None:intergenic | 25.0% |
| ! | ACATGCTATATCGAATATAA+AGG | + | chr2_4:3443103-3443122 | Msa0309000:CDS | 25.0% |
| !!! | GAAGATTCAACATTGATTTA+TGG | - | chr2_4:3443497-3443516 | None:intergenic | 25.0% |
| ! | AATGTTGAATCTTCCATTTA+GGG | + | chr2_4:3443503-3443522 | Msa0309000:intron | 25.0% |
| !! | TATAAGGTTAAGGCATTTAA+AGG | + | chr2_4:3443853-3443872 | Msa0309000:CDS | 25.0% |
| ! | GTATTTATATTGAACCTTAG+TGG | + | chr2_4:3443928-3443947 | Msa0309000:intron | 25.0% |
| !!! | GTGCATTATTGTTATTTCAA+CGG | - | chr2_4:3444113-3444132 | None:intergenic | 25.0% |
| !! | AGGCATACAATTTTAAACTT+GGG | + | chr2_4:3444430-3444449 | Msa0309000:intron | 25.0% |
| ! | TTCACGTAAAGAATATGTTA+AGG | - | chr2_4:3444471-3444490 | None:intergenic | 25.0% |
| ! | CTTTGTACAAATAAAGAAGA+TGG | - | chr2_4:3444597-3444616 | None:intergenic | 25.0% |
| ! | CAAATAAAAAAGCTTGATAC+CGG | + | chr2_4:3444653-3444672 | Msa0309000:CDS | 25.0% |
| ! | GTGTATAATTTAATCTGCAT+AGG | - | chr2_4:3444976-3444995 | None:intergenic | 25.0% |
| !! | GTACAAATCTTTGAAAAATG+AGG | + | chr2_4:3445176-3445195 | Msa0309000:intron | 25.0% |
| ! | AAAAAGGTCATTATACTACT+TGG | + | chr2_4:3445281-3445300 | Msa0309000:intron | 25.0% |
| ! | AATGAATCAATGATAGATAG+AGG | - | chr2_4:3445511-3445530 | None:intergenic | 25.0% |
| ! | TAAACAACAGCTCATTATTT+AGG | - | chr2_4:3445655-3445674 | None:intergenic | 25.0% |
| ! | TTATTTGATTAGCAGCAATT+TGG | + | chr2_4:3445672-3445691 | Msa0309000:intron | 25.0% |
| !! | ACAACGTTGTTAATATCTTT+TGG | - | chr2_4:3445775-3445794 | None:intergenic | 25.0% |
| !!! | ATGATATTGACTTCTAAAAG+AGG | - | chr2_4:3446023-3446042 | None:intergenic | 25.0% |
| !!! | TCTTTTAGAAGTCAATATCA+TGG | + | chr2_4:3446022-3446041 | Msa0309000:intron | 25.0% |
| ! | TTTCCCATTAACAAAACTAT+AGG | - | chr2_4:3446384-3446403 | None:intergenic | 25.0% |
| !!! | ATCAATTTTAAGAAATCCGA+TGG | + | chr2_4:3446542-3446561 | Msa0309000:three_prime_UTR | 25.0% |
| !!! | GTATGGTAATTGATAATGAT+TGG | + | chr2_4:3446599-3446618 | Msa0309000:three_prime_UTR | 25.0% |
| TGTAACGATGAAGAAAAAGA+CGG | + | chr2_4:3438974-3438993 | Msa0309000:exon | 30.0% | |
| TCTGAATTAGAACATGAAGA+AGG | + | chr2_4:3439261-3439280 | Msa0309000:CDS | 30.0% | |
| GAAGTTGTTGAATCGAAATT+GGG | - | chr2_4:3439382-3439401 | None:intergenic | 30.0% | |
| !!! | GCTGTTTTTATGAGCTATAT+TGG | + | chr2_4:3439558-3439577 | Msa0309000:intron | 30.0% |
| CAGGTCCATAGTAATATAAA+TGG | - | chr2_4:3440082-3440101 | None:intergenic | 30.0% | |
| TTGATGTCATATCCAATATG+GGG | - | chr2_4:3440192-3440211 | None:intergenic | 30.0% | |
| CTTGATGTCATATCCAATAT+GGG | - | chr2_4:3440193-3440212 | None:intergenic | 30.0% | |
| CATATTGGATATGACATCAA+GGG | + | chr2_4:3440192-3440211 | Msa0309000:CDS | 30.0% | |
| ATATTGGATATGACATCAAG+GGG | + | chr2_4:3440193-3440212 | Msa0309000:CDS | 30.0% | |
| AAAGAAAGGGAAGACAAATT+GGG | + | chr2_4:3440231-3440250 | Msa0309000:CDS | 30.0% | |
| ATCATCAACATTTGCAAGAA+AGG | - | chr2_4:3440259-3440278 | None:intergenic | 30.0% | |
| TAAGTGCGTAGATTGTTAAT+AGG | + | chr2_4:3440454-3440473 | Msa0309000:intron | 30.0% | |
| ! | GGTCTTTTTACACTGTATAT+AGG | + | chr2_4:3440499-3440518 | Msa0309000:intron | 30.0% |
| !!! | TGTTGGTGTCAAGTTTTTTT+TGG | + | chr2_4:3440535-3440554 | Msa0309000:intron | 30.0% |
| GATTTACTTACAACCTTTGA+TGG | + | chr2_4:3440568-3440587 | Msa0309000:intron | 30.0% | |
| TATCTGTGTTTCTTGTACTT+GGG | + | chr2_4:3440600-3440619 | Msa0309000:intron | 30.0% | |
| ! | TGAATGATGATGTAGAAATC+TGG | + | chr2_4:3440771-3440790 | Msa0309000:intron | 30.0% |
| GAGAATTAGTGAGATATATG+AGG | - | chr2_4:3440797-3440816 | None:intergenic | 30.0% | |
| !! | GTCTTCATTTTTAAGAGAGA+AGG | - | chr2_4:3440868-3440887 | None:intergenic | 30.0% |
| !! | TAAAAGGAAGAAGTACTTGT+AGG | + | chr2_4:3440918-3440937 | Msa0309000:intron | 30.0% |
| !! | TCATGTGTTTGAGCTATTTT+AGG | - | chr2_4:3441163-3441182 | None:intergenic | 30.0% |
| ! | TATTTTACATGGGTCTTTCT+TGG | - | chr2_4:3441262-3441281 | None:intergenic | 30.0% |
| ! | AAGTAAACACAAATTGGTCT+CGG | - | chr2_4:3441568-3441587 | None:intergenic | 30.0% |
| TCGGTTTCAATGTTATAGTT+TGG | + | chr2_4:3441693-3441712 | Msa0309000:intron | 30.0% | |
| TCGGTTTCAATGTTATAGTT+TGG | + | chr2_4:3441693-3441712 | Msa0309000:intron | 30.0% | |
| GAAAGAAAGTAAATACAGAC+CGG | - | chr2_4:3441989-3442008 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAACTCAATTAGCA+TGG | + | chr2_4:3442043-3442062 | Msa0309000:intron | 30.0% |
| ! | ATATCTGTTTTGTAATGTGC+AGG | + | chr2_4:3442082-3442101 | Msa0309000:intron | 30.0% |
| ATTATGTTGAGTGGTTCAAA+TGG | + | chr2_4:3442105-3442124 | Msa0309000:CDS | 30.0% | |
| TTATGTTGAGTGGTTCAAAT+GGG | + | chr2_4:3442106-3442125 | Msa0309000:CDS | 30.0% | |
| !! | TTTGCTTTATTTGTCTAACC+TGG | - | chr2_4:3442272-3442291 | None:intergenic | 30.0% |
| ! | TGTATGTTTCTACTTTCTAC+AGG | + | chr2_4:3442318-3442337 | Msa0309000:intron | 30.0% |
| GACAGAAAAAGCAAATCATT+TGG | + | chr2_4:3442441-3442460 | Msa0309000:CDS | 30.0% | |
| ACCTTTGTGGGATAAATTTA+GGG | - | chr2_4:3442681-3442700 | None:intergenic | 30.0% | |
| TACCTTTGTGGGATAAATTT+AGG | - | chr2_4:3442682-3442701 | None:intergenic | 30.0% | |
| ATCAATATTAAGCTGGACAT+AGG | - | chr2_4:3443026-3443045 | None:intergenic | 30.0% | |
| ATTCAGGATCAATATTAAGC+TGG | - | chr2_4:3443033-3443052 | None:intergenic | 30.0% | |
| !! | TCCTTTTTATTTGGAAGCTT+TGG | - | chr2_4:3443064-3443083 | None:intergenic | 30.0% |
| ! | GGTTTAAGCTCCTTTTTATT+TGG | - | chr2_4:3443073-3443092 | None:intergenic | 30.0% |
| ATTCGATATAGCATGTTATG+GGG | - | chr2_4:3443099-3443118 | None:intergenic | 30.0% | |
| TCAATTTCTATTGAAGCTTC+AGG | + | chr2_4:3443145-3443164 | Msa0309000:CDS | 30.0% | |
| CAATTTCTATTGAAGCTTCA+GGG | + | chr2_4:3443146-3443165 | Msa0309000:CDS | 30.0% | |
| !!! | TTTTGGTTTCGATTAAACAG+TGG | + | chr2_4:3443209-3443228 | Msa0309000:intron | 30.0% |
| TCACAAAATCCAATTAAGTG+AGG | - | chr2_4:3443245-3443264 | None:intergenic | 30.0% | |
| ! | CACTTAATTGGATTTTGTGA+AGG | + | chr2_4:3443245-3443264 | Msa0309000:intron | 30.0% |
| ACAATATGAATATCAGACAG+AGG | - | chr2_4:3443368-3443387 | None:intergenic | 30.0% | |
| TCTGTCTGATATTCATATTG+TGG | + | chr2_4:3443367-3443386 | Msa0309000:CDS | 30.0% | |
| AAGTCACGTGTATAACAAAA+AGG | - | chr2_4:3443466-3443485 | None:intergenic | 30.0% | |
| CAATGTTGAATCTTCCATTT+AGG | + | chr2_4:3443502-3443521 | Msa0309000:intron | 30.0% | |
| ATGTTGAATCTTCCATTTAG+GGG | + | chr2_4:3443504-3443523 | Msa0309000:intron | 30.0% | |
| TATATGTTAACATGGGAGTT+GGG | - | chr2_4:3443704-3443723 | None:intergenic | 30.0% | |
| TTATATGTTAACATGGGAGT+TGG | - | chr2_4:3443705-3443724 | None:intergenic | 30.0% | |
| TTGGGGTTATATGTTAACAT+GGG | - | chr2_4:3443711-3443730 | None:intergenic | 30.0% | |
| AAATAACAGAACAAACTAGC+TGG | - | chr2_4:3443761-3443780 | None:intergenic | 30.0% | |
| CTTAAAGATGATAAACACGA+TGG | + | chr2_4:3443830-3443849 | Msa0309000:CDS | 30.0% | |
| ATGATAAACACGATGGTATA+AGG | + | chr2_4:3443837-3443856 | Msa0309000:CDS | 30.0% | |
| TGAGAAAACCTAACTAGAAA+TGG | - | chr2_4:3443892-3443911 | None:intergenic | 30.0% | |
| AGTCTTTATGTCTTTCAACA+TGG | + | chr2_4:3444191-3444210 | Msa0309000:intron | 30.0% | |
| ! | GAGGCATACAATTTTAAACT+TGG | + | chr2_4:3444429-3444448 | Msa0309000:intron | 30.0% |
| ! | AAGTTTTTGTGAGAGTTTCT+TGG | - | chr2_4:3444522-3444541 | None:intergenic | 30.0% |
| !! | AAACTTCCTTTCAAGTTACA+TGG | + | chr2_4:3444536-3444555 | Msa0309000:CDS | 30.0% |
| TAACTAATAACAATACCTCC+AGG | - | chr2_4:3444710-3444729 | None:intergenic | 30.0% | |
| CAATTAAATTATCACCTGCA+TGG | - | chr2_4:3444815-3444834 | None:intergenic | 30.0% | |
| TGCAGGTGATAATTTAATTG+TGG | + | chr2_4:3444815-3444834 | Msa0309000:intron | 30.0% | |
| GCAGGTGATAATTTAATTGT+GGG | + | chr2_4:3444816-3444835 | Msa0309000:intron | 30.0% | |
| CAGGTGATAATTTAATTGTG+GGG | + | chr2_4:3444817-3444836 | Msa0309000:intron | 30.0% | |
| !! | AAAGCTTTGTTGGTTTGATA+TGG | + | chr2_4:3444851-3444870 | Msa0309000:CDS | 30.0% |
| CTTTATATGGTTTAGACGAA+AGG | - | chr2_4:3444878-3444897 | None:intergenic | 30.0% | |
| TTTCTGTTGATCTTACATCA+TGG | + | chr2_4:3445027-3445046 | Msa0309000:intron | 30.0% | |
| !! | CTTATACAGAACTTTGGAAT+TGG | - | chr2_4:3445118-3445137 | None:intergenic | 30.0% |
| AGGTTTCTTATACAGAACTT+TGG | - | chr2_4:3445124-3445143 | None:intergenic | 30.0% | |
| CTAATCTCACCATAAACTAA+AGG | - | chr2_4:3445472-3445491 | None:intergenic | 30.0% | |
| TTTCAAAGAATAGTGTTTCC+CGG | - | chr2_4:3445558-3445577 | None:intergenic | 30.0% | |
| AAATCCTCTTATTGTTCCTT+TGG | + | chr2_4:3445885-3445904 | Msa0309000:CDS | 30.0% | |
| ATTTCCAAAGGAACAATAAG+AGG | - | chr2_4:3445892-3445911 | None:intergenic | 30.0% | |
| ! | TTGTTCCTTTGGAAATTCTA+CGG | + | chr2_4:3445896-3445915 | Msa0309000:CDS | 30.0% |
| TAGAAGTCAATATCATGGTT+TGG | + | chr2_4:3446027-3446046 | Msa0309000:intron | 30.0% | |
| AGAAGTCAATATCATGGTTT+GGG | + | chr2_4:3446028-3446047 | Msa0309000:intron | 30.0% | |
| GCAATGCAAATAAACTTAAG+AGG | - | chr2_4:3446128-3446147 | None:intergenic | 30.0% | |
| CTTAAGTTTATTTGCATTGC+AGG | + | chr2_4:3446128-3446147 | Msa0309000:intron | 30.0% | |
| TATTTGCATTGCAGGAATAT+TGG | + | chr2_4:3446136-3446155 | Msa0309000:intron | 30.0% | |
| AAAATTGGGAATAGAGTTAC+AGG | - | chr2_4:3446293-3446312 | None:intergenic | 30.0% | |
| AACAATTGGGGAACAAAATT+GGG | - | chr2_4:3446307-3446326 | None:intergenic | 30.0% | |
| TAACAATTGGGGAACAAAAT+TGG | - | chr2_4:3446308-3446327 | None:intergenic | 30.0% | |
| AGCTTTCTGTTTAACAATTG+GGG | - | chr2_4:3446319-3446338 | None:intergenic | 30.0% | |
| CAGCTTTCTGTTTAACAATT+GGG | - | chr2_4:3446320-3446339 | None:intergenic | 30.0% | |
| TCAGCTTTCTGTTTAACAAT+TGG | - | chr2_4:3446321-3446340 | None:intergenic | 30.0% | |
| !!! | TCTGCCTATAGTTTTGTTAA+TGG | + | chr2_4:3446377-3446396 | Msa0309000:three_prime_UTR | 30.0% |
| !!! | CTGCCTATAGTTTTGTTAAT+GGG | + | chr2_4:3446378-3446397 | Msa0309000:three_prime_UTR | 30.0% |
| !! | TTCTTTGAAGTTGAAATACC+AGG | + | chr2_4:3446438-3446457 | Msa0309000:three_prime_UTR | 30.0% |
| ! | AATAGTAAGCAGATTTTTGC+CGG | - | chr2_4:3446476-3446495 | None:intergenic | 30.0% |
| !! | TTGTACAATGGTGTTATGAA+AGG | - | chr2_4:3446632-3446651 | None:intergenic | 30.0% |
| AATGAATGAATGAGTAAGGG+TGG | + | chr2_4:3438850-3438869 | Msa0309000:five_prime_UTR | 35.0% | |
| ATGAATGAATGAGTAAGGGT+GGG | + | chr2_4:3438851-3438870 | Msa0309000:five_prime_UTR | 35.0% | |
| TTGTGAAACTAGCTAAGCTA+GGG | - | chr2_4:3438893-3438912 | None:intergenic | 35.0% | |
| TTTGTGAAACTAGCTAAGCT+AGG | - | chr2_4:3438894-3438913 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr2_4:3438949-3438968 | None:intergenic | 35.0% | |
| TTCCTCTTTCTTCTTCATCT+CGG | - | chr2_4:3439009-3439028 | None:intergenic | 35.0% | |
| TGAAGAAAGTGAGTGAAGAA+GGG | - | chr2_4:3439135-3439154 | None:intergenic | 35.0% | |
| ATGAAGAAAGTGAGTGAAGA+AGG | - | chr2_4:3439136-3439155 | None:intergenic | 35.0% | |
| TGAGTAGTAGTAGTAGTAGT+AGG | - | chr2_4:3439294-3439313 | None:intergenic | 35.0% | |
| ACTACTACTACTCATCATCA+TGG | + | chr2_4:3439300-3439319 | Msa0309000:CDS | 35.0% | |
| CGAAGTTGTTGAATCGAAAT+TGG | - | chr2_4:3439383-3439402 | None:intergenic | 35.0% | |
| ! | AGCTCTTTTCACCCTATTTA+CGG | + | chr2_4:3439414-3439433 | Msa0309000:intron | 35.0% |
| ! | AATAAGGTGTTTGTCCAAAC+AGG | - | chr2_4:3439440-3439459 | None:intergenic | 35.0% |
| TGAGCTATAAGCTGCAAATA+AGG | - | chr2_4:3439456-3439475 | None:intergenic | 35.0% | |
| !! | CTGACATAAGTTTTGTGAGA+CGG | - | chr2_4:3439655-3439674 | None:intergenic | 35.0% |
| TCTCACAAAACTTATGTCAG+TGG | + | chr2_4:3439655-3439674 | Msa0309000:intron | 35.0% | |
| GTGGATAAGCCAATTTAAAC+AGG | + | chr2_4:3439674-3439693 | Msa0309000:intron | 35.0% | |
| CCTTGATGTCATATCCAATA+TGG | - | chr2_4:3440194-3440213 | None:intergenic | 35.0% | |
| CCATATTGGATATGACATCA+AGG | + | chr2_4:3440191-3440210 | Msa0309000:CDS | 35.0% | |
| GAAAGAAAGGGAAGACAAAT+TGG | + | chr2_4:3440230-3440249 | Msa0309000:CDS | 35.0% | |
| TTGTACTCACTGACACATAT+AGG | + | chr2_4:3440353-3440372 | Msa0309000:intron | 35.0% | |
| !!! | TAGGTTTTGAGAGCATTTGT+TGG | + | chr2_4:3440518-3440537 | Msa0309000:intron | 35.0% |
| !!! | AGTTTTTTTTGGTCGCTAAG+AGG | + | chr2_4:3440546-3440565 | Msa0309000:intron | 35.0% |
| GATACAGTATCATCCATCAA+AGG | - | chr2_4:3440584-3440603 | None:intergenic | 35.0% | |
| GTATCTGTGTTTCTTGTACT+TGG | + | chr2_4:3440599-3440618 | Msa0309000:intron | 35.0% | |
| ACAGGACTTAACTCTAAATG+TGG | - | chr2_4:3440659-3440678 | None:intergenic | 35.0% | |
| CACATCCATGTTAATATGTG+GGG | - | chr2_4:3440740-3440759 | None:intergenic | 35.0% | |
| GCACATCCATGTTAATATGT+GGG | - | chr2_4:3440741-3440760 | None:intergenic | 35.0% | |
| TGCACATCCATGTTAATATG+TGG | - | chr2_4:3440742-3440761 | None:intergenic | 35.0% | |
| !! | TTTTTAAGAGAGAAGGACAC+TGG | - | chr2_4:3440861-3440880 | None:intergenic | 35.0% |
| TCTCACTCACTGACATATAT+AGG | - | chr2_4:3440998-3441017 | None:intergenic | 35.0% | |
| TGCACCTAACCTATATATGT+CGG | + | chr2_4:3441042-3441061 | Msa0309000:intron | 35.0% | |
| !! | CAATGATGGATGAAAAGTTG+CGG | + | chr2_4:3441130-3441149 | Msa0309000:intron | 35.0% |
| AAATAGCTCAAACACATGAG+AGG | + | chr2_4:3441164-3441183 | Msa0309000:intron | 35.0% | |
| !! | GTGTTCGAGCTATTTTACAT+GGG | - | chr2_4:3441272-3441291 | None:intergenic | 35.0% |
| !! | TGTGTTCGAGCTATTTTACA+TGG | - | chr2_4:3441273-3441292 | None:intergenic | 35.0% |
| AGTCTGATAATTGCAGATAG+AGG | + | chr2_4:3441232-3441251 | Msa0309000:intron | 35.0% | |
| ACAACAACAACAATGTCAAC+TGG | - | chr2_4:3441467-3441486 | None:intergenic | 35.0% | |
| !! | TTTTGGAGATCAGGAATCTA+TGG | - | chr2_4:3441641-3441660 | None:intergenic | 35.0% |
| !! | TCATGACTATTTTGGAGATC+AGG | - | chr2_4:3441650-3441669 | None:intergenic | 35.0% |
| CTTTGATGAGTACAATGATG+AGG | + | chr2_4:3441880-3441899 | Msa0309000:CDS | 35.0% | |
| AAGGTTCATTCCTTCAAAGT+GGG | + | chr2_4:3442172-3442191 | Msa0309000:CDS | 35.0% | |
| !!! | TTTTTAGCTTCCCACTTTGA+AGG | - | chr2_4:3442185-3442204 | None:intergenic | 35.0% |
| TTCAAAGTGGGAAGCTAAAA+AGG | + | chr2_4:3442184-3442203 | Msa0309000:CDS | 35.0% | |
| TATGTTAGAGGAATTCGCAA+TGG | + | chr2_4:3442349-3442368 | Msa0309000:CDS | 35.0% | |
| ! | AACTTTTGACAAGCCAAAGA+AGG | + | chr2_4:3442378-3442397 | Msa0309000:CDS | 35.0% |
| TAAGAATCATCCTCCTTCTT+TGG | - | chr2_4:3442394-3442413 | None:intergenic | 35.0% | |
| AGGATGATTCTTATCTCTTG+TGG | + | chr2_4:3442401-3442420 | Msa0309000:CDS | 35.0% | |
| GGATGATTCTTATCTCTTGT+GGG | + | chr2_4:3442402-3442421 | Msa0309000:CDS | 35.0% | |
| !! | CAAAGGTACCGAAAAAGAAA+AGG | - | chr2_4:3442542-3442561 | None:intergenic | 35.0% |
| GAGGATTATATGACTCATCA+TGG | - | chr2_4:3442594-3442613 | None:intergenic | 35.0% | |
| ! | GTTGGAATATACTCTAAAGG+AGG | - | chr2_4:3442613-3442632 | None:intergenic | 35.0% |
| ! | TGGGTTGGAATATACTCTAA+AGG | - | chr2_4:3442616-3442635 | None:intergenic | 35.0% |
| GAATTAATCTCTTCTTGGGT+TGG | - | chr2_4:3442631-3442650 | None:intergenic | 35.0% | |
| TTTGTGGGATAAATTTAGGG+CGG | - | chr2_4:3442678-3442697 | None:intergenic | 35.0% | |
| !! | AGCTTTGGCTTTAAAGATTC+AGG | - | chr2_4:3443049-3443068 | None:intergenic | 35.0% |
| GCCAAAGCTTCCAAATAAAA+AGG | + | chr2_4:3443060-3443079 | Msa0309000:CDS | 35.0% | |
| ATATAGCATGTTATGGGGTA+AGG | - | chr2_4:3443094-3443113 | None:intergenic | 35.0% | |
| ATCGAATATAAAGGCCATGA+AGG | + | chr2_4:3443112-3443131 | Msa0309000:CDS | 35.0% | |
| ! | TTTTGTGAAGGTTCAAGTGA+TGG | + | chr2_4:3443257-3443276 | Msa0309000:intron | 35.0% |
| AGAAGAACAGCAAAGGATTA+AGG | + | chr2_4:3443566-3443585 | Msa0309000:CDS | 35.0% | |
| ATAAACATCGATCCAGAAGA+AGG | + | chr2_4:3443667-3443686 | Msa0309000:intron | 35.0% | |
| GTTGGGGTTATATGTTAACA+TGG | - | chr2_4:3443712-3443731 | None:intergenic | 35.0% | |
| AACACGATGGTATAAGGTTA+AGG | + | chr2_4:3443843-3443862 | Msa0309000:CDS | 35.0% | |
| !! | ACTTGTCTCCATTTCTAGTT+AGG | + | chr2_4:3443881-3443900 | Msa0309000:intron | 35.0% |
| ! | AGAATGTTACTTCTGTGGAA+TGG | + | chr2_4:3443963-3443982 | Msa0309000:intron | 35.0% |
| TTGAAAAGTAGTCACCTTTC+CGG | - | chr2_4:3443991-3444010 | None:intergenic | 35.0% | |
| AGACATAAAGACTACTACTG+AGG | - | chr2_4:3444184-3444203 | None:intergenic | 35.0% | |
| CTAACAGCTCACTAGATAAA+TGG | - | chr2_4:3444252-3444271 | None:intergenic | 35.0% | |
| AGATCTTACATGAAATGAGG+GGG | - | chr2_4:3444287-3444306 | None:intergenic | 35.0% | |
| CAGATCTTACATGAAATGAG+GGG | - | chr2_4:3444288-3444307 | None:intergenic | 35.0% | |
| GCAGATCTTACATGAAATGA+GGG | - | chr2_4:3444289-3444308 | None:intergenic | 35.0% | |
| AGCAGATCTTACATGAAATG+AGG | - | chr2_4:3444290-3444309 | None:intergenic | 35.0% | |
| ATAAAGAAGATGGAACGAGA+TGG | - | chr2_4:3444587-3444606 | None:intergenic | 35.0% | |
| TAATAACAATACCTCCAGGA+TGG | - | chr2_4:3444706-3444725 | None:intergenic | 35.0% | |
| ! | TCATTTGCATTGATAGCACA+TGG | - | chr2_4:3444998-3445017 | None:intergenic | 35.0% |
| AGGTGACAGTTGTGAAATTA+CGG | - | chr2_4:3445075-3445094 | None:intergenic | 35.0% | |
| TTCAAAGAATAGTGTTTCCC+GGG | - | chr2_4:3445557-3445576 | None:intergenic | 35.0% | |
| ACAGCTCATTATTTAGGTAC+TGG | - | chr2_4:3445649-3445668 | None:intergenic | 35.0% | |
| !! | TAACAAGTTGATGTCATTGC+AGG | + | chr2_4:3445743-3445762 | Msa0309000:intron | 35.0% |
| ! | TGCACTGCATATGTTTTTCA+CGG | + | chr2_4:3445838-3445857 | Msa0309000:CDS | 35.0% |
| ! | TGCATATGTTTTTCACGGAA+TGG | + | chr2_4:3445843-3445862 | Msa0309000:CDS | 35.0% |
| ! | TGTTCCTTTGGAAATTCTAC+GGG | + | chr2_4:3445897-3445916 | Msa0309000:CDS | 35.0% |
| GAAGTCAATATCATGGTTTG+GGG | + | chr2_4:3446029-3446048 | Msa0309000:intron | 35.0% | |
| CCACTGTTATCCCAAATTTA+GGG | + | chr2_4:3446343-3446362 | Msa0309000:three_prime_UTR | 35.0% | |
| CACTGTTATCCCAAATTTAG+GGG | + | chr2_4:3446344-3446363 | Msa0309000:three_prime_UTR | 35.0% | |
| ! | ATAGTAAGCAGATTTTTGCC+GGG | - | chr2_4:3446475-3446494 | None:intergenic | 35.0% |
| ! | GTTTAAGACACAGGTTTGGT+TGG | - | chr2_4:3438917-3438936 | None:intergenic | 40.0% |
| AAGAAGAAGAAGGTGAGAGA+GGG | - | chr2_4:3438939-3438958 | None:intergenic | 40.0% | |
| TCATCGGAATCATGATCAGA+TGG | - | chr2_4:3439044-3439063 | None:intergenic | 40.0% | |
| GGAAACTTCAACACTGTCAT+CGG | - | chr2_4:3439075-3439094 | None:intergenic | 40.0% | |
| TTCGGAAATGGAATCGTAGT+CGG | - | chr2_4:3439096-3439115 | None:intergenic | 40.0% | |
| TTCCATTTCCGAAGATGAAG+AGG | + | chr2_4:3439103-3439122 | Msa0309000:CDS | 40.0% | |
| TACCTCTTCATCTTCGGAAA+TGG | - | chr2_4:3439108-3439127 | None:intergenic | 40.0% | |
| GGATGATACCTCTTCATCTT+CGG | - | chr2_4:3439114-3439133 | None:intergenic | 40.0% | |
| ! | TCTTCTGTTCTGTTTGTTGC+AGG | + | chr2_4:3439185-3439204 | Msa0309000:intron | 40.0% |
| !! | ATAAGTTTTGTGAGACGGCT+TGG | - | chr2_4:3439650-3439669 | None:intergenic | 40.0% |
| ACTCATGGGCCTGTTTAAAT+TGG | - | chr2_4:3439686-3439705 | None:intergenic | 40.0% | |
| CATAATAGCAGAGGACTGTT+TGG | - | chr2_4:3439854-3439873 | None:intergenic | 40.0% | |
| !! | ATTGTAGGACGTTGATGACT+CGG | + | chr2_4:3439940-3439959 | Msa0309000:intron | 40.0% |
| GGACCTGAATTTGATTACTC+TGG | + | chr2_4:3440095-3440114 | Msa0309000:intron | 40.0% | |
| GAGCCAGAGTAATCAAATTC+AGG | - | chr2_4:3440101-3440120 | None:intergenic | 40.0% | |
| CATCCTCATACCACTTCAAA+GGG | - | chr2_4:3440167-3440186 | None:intergenic | 40.0% | |
| TCATCCTCATACCACTTCAA+AGG | - | chr2_4:3440168-3440187 | None:intergenic | 40.0% | |
| TATGAGGATGAACCCCATAT+TGG | + | chr2_4:3440177-3440196 | Msa0309000:CDS | 40.0% | |
| ATGTTAATATGTGGGGACTG+GGG | - | chr2_4:3440733-3440752 | None:intergenic | 40.0% | |
| CATGTTAATATGTGGGGACT+GGG | - | chr2_4:3440734-3440753 | None:intergenic | 40.0% | |
| ! | GAAGTACTTGTAGGTCAGTT+AGG | + | chr2_4:3440927-3440946 | Msa0309000:intron | 40.0% |
| CTCACTGACATATATAGGCT+AGG | - | chr2_4:3440993-3441012 | None:intergenic | 40.0% | |
| CTCACCGACATATATAGGTT+AGG | - | chr2_4:3441049-3441068 | None:intergenic | 40.0% | |
| TCTCACTCACCGACATATAT+AGG | - | chr2_4:3441054-3441073 | None:intergenic | 40.0% | |
| CATGAGAGGAGGATCAATAT+AGG | + | chr2_4:3441178-3441197 | Msa0309000:intron | 40.0% | |
| AAATAGCTCGAACACATGAG+AGG | + | chr2_4:3441277-3441296 | Msa0309000:intron | 40.0% | |
| CATGAGAGGAGGTTCAATAT+AGG | + | chr2_4:3441291-3441310 | Msa0309000:intron | 40.0% | |
| CTAACATGGGTCTTCTTTCT+TGG | - | chr2_4:3441375-3441394 | None:intergenic | 40.0% | |
| CAAGAAAGAAGACCCATGTT+AGG | + | chr2_4:3441373-3441392 | Msa0309000:intron | 40.0% | |
| GATCAGGAATCTATGGTTGA+TGG | - | chr2_4:3441634-3441653 | None:intergenic | 40.0% | |
| TTCTTGATCATTTAGGCGGA+AGG | + | chr2_4:3441856-3441875 | Msa0309000:intron | 40.0% | |
| TGAGTACAATGATGAGGAAG+TGG | + | chr2_4:3441886-3441905 | Msa0309000:CDS | 40.0% | |
| GCGCAAACTAATGCAGAATA+AGG | + | chr2_4:3441937-3441956 | Msa0309000:CDS | 40.0% | |
| TGTGGATCAAAGTCAGAATG+TGG | - | chr2_4:3441965-3441984 | None:intergenic | 40.0% | |
| TTCTGACTTTGATCCACATC+CGG | + | chr2_4:3441967-3441986 | Msa0309000:CDS | 40.0% | |
| AAGTAAATACAGACCGGATG+TGG | - | chr2_4:3441983-3442002 | None:intergenic | 40.0% | |
| ATGTGCAGGATTATGTTGAG+TGG | + | chr2_4:3442096-3442115 | Msa0309000:intron | 40.0% | |
| ! | AATGAACCTTCGTTTGGGTT+CGG | - | chr2_4:3442162-3442181 | None:intergenic | 40.0% |
| GAAGGAATGAACCTTCGTTT+GGG | - | chr2_4:3442167-3442186 | None:intergenic | 40.0% | |
| TGAAGGAATGAACCTTCGTT+TGG | - | chr2_4:3442168-3442187 | None:intergenic | 40.0% | |
| GAAGGTTCATTCCTTCAAAG+TGG | + | chr2_4:3442171-3442190 | Msa0309000:CDS | 40.0% | |
| CGATTAGGTACAGATTATCC+AGG | + | chr2_4:3442251-3442270 | Msa0309000:intron | 40.0% | |
| ! | TTTTGACAAGCCAAAGAAGG+AGG | + | chr2_4:3442381-3442400 | Msa0309000:CDS | 40.0% |
| ATACCAGGAAGTTTCTGCTT+TGG | - | chr2_4:3442481-3442500 | None:intergenic | 40.0% | |
| TTCAAGTCACGTGTAATACC+AGG | - | chr2_4:3442496-3442515 | None:intergenic | 40.0% | |
| ATCATGGCCTGAGAAGTAAA+AGG | - | chr2_4:3442578-3442597 | None:intergenic | 40.0% | |
| GCCCTAAATTTATCCCACAA+AGG | + | chr2_4:3442677-3442696 | Msa0309000:CDS | 40.0% | |
| ! | TGAAAGCACAGTACCTTTGT+GGG | - | chr2_4:3442693-3442712 | None:intergenic | 40.0% |
| ! | ATGAAAGCACAGTACCTTTG+TGG | - | chr2_4:3442694-3442713 | None:intergenic | 40.0% |
| !! | ACAAAGGTACTGTGCTTTCA+TGG | + | chr2_4:3442693-3442712 | Msa0309000:intron | 40.0% |
| CAATTGCATAAGAGAGACAG+AGG | - | chr2_4:3442731-3442750 | None:intergenic | 40.0% | |
| GCTTCTCATAGATGTAAACC+TGG | - | chr2_4:3442773-3442792 | None:intergenic | 40.0% | |
| TCATAGCATTGTCATACGCA+GGG | - | chr2_4:3442798-3442817 | None:intergenic | 40.0% | |
| TTCATAGCATTGTCATACGC+AGG | - | chr2_4:3442799-3442818 | None:intergenic | 40.0% | |
| TGCGTATGACAATGCTATGA+AGG | + | chr2_4:3442798-3442817 | Msa0309000:CDS | 40.0% | |
| !!! | GGAAAGTTTTGAACGCTGTT+TGG | + | chr2_4:3442819-3442838 | Msa0309000:CDS | 40.0% |
| GTGCATGTGTGTTTCATATC+TGG | + | chr2_4:3442973-3442992 | Msa0309000:intron | 40.0% | |
| TTGATGTAACTGCACCTTCA+TGG | - | chr2_4:3443129-3443148 | None:intergenic | 40.0% | |
| TGGTTTCGATTAAACAGTGG+AGG | + | chr2_4:3443212-3443231 | Msa0309000:intron | 40.0% | |
| TTCGATTAAACAGTGGAGGT+CGG | + | chr2_4:3443216-3443235 | Msa0309000:intron | 40.0% | |
| ! | AAGCTGTGAACTGTGTTACT+TGG | + | chr2_4:3443339-3443358 | Msa0309000:CDS | 40.0% |
| AGTACATCTTGTCCCCTAAA+TGG | - | chr2_4:3443519-3443538 | None:intergenic | 40.0% | |
| GATGTACTTCTGTTCAACAC+TGG | + | chr2_4:3443531-3443550 | Msa0309000:CDS | 40.0% | |
| ! | ACTTCTGTTCAACACTGGTT+TGG | + | chr2_4:3443536-3443555 | Msa0309000:CDS | 40.0% |
| !! | CTTCTGTTCAACACTGGTTT+GGG | + | chr2_4:3443537-3443556 | Msa0309000:CDS | 40.0% |
| GTGATGAAGAAGAACAGCAA+AGG | + | chr2_4:3443559-3443578 | Msa0309000:CDS | 40.0% | |
| CTGCATGAATACATCCACTA+AGG | - | chr2_4:3443945-3443964 | None:intergenic | 40.0% | |
| ! | CATGCAGAATGTTACTTCTG+TGG | + | chr2_4:3443958-3443977 | Msa0309000:intron | 40.0% |
| CAACAATAAAGGATATCCGC+TGG | - | chr2_4:3444022-3444041 | None:intergenic | 40.0% | |
| GCAAGTCCATGTAACTTGAA+AGG | - | chr2_4:3444545-3444564 | None:intergenic | 40.0% | |
| TCTATACACACATTCCATGC+AGG | + | chr2_4:3444798-3444817 | Msa0309000:intron | 40.0% | |
| TTAATTGTGGGGAGCAAAGA+AGG | + | chr2_4:3444828-3444847 | Msa0309000:CDS | 40.0% | |
| ! | GCAAAGAAGGAAAGCTTTGT+TGG | + | chr2_4:3444841-3444860 | Msa0309000:CDS | 40.0% |
| TTATCGCCATTGCAGAGTTT+AGG | + | chr2_4:3445216-3445235 | Msa0309000:intron | 40.0% | |
| TATCGCCATTGCAGAGTTTA+GGG | + | chr2_4:3445217-3445236 | Msa0309000:intron | 40.0% | |
| ! | AGTCAAACTTAAGGCTTGCT+AGG | - | chr2_4:3445435-3445454 | None:intergenic | 40.0% |
| ! | GTTCCTTTGGAAATTCTACG+GGG | + | chr2_4:3445898-3445917 | Msa0309000:CDS | 40.0% |
| CTCTCCCATTTGAATTTGCA+TGG | - | chr2_4:3445924-3445943 | None:intergenic | 40.0% | |
| CATGCAAATTCAAATGGGAG+AGG | + | chr2_4:3445922-3445941 | Msa0309000:CDS | 40.0% | |
| AACCCTGGTTATTTACAGCT+GGG | + | chr2_4:3446180-3446199 | Msa0309000:CDS | 40.0% | |
| GCCACTGTTATCCCAAATTT+AGG | + | chr2_4:3446342-3446361 | Msa0309000:three_prime_UTR | 40.0% | |
| ! | CCCTAAATTTGGGATAACAG+TGG | - | chr2_4:3446346-3446365 | None:intergenic | 40.0% |
| TTATCCCAAATTTAGGGGTG+AGG | + | chr2_4:3446349-3446368 | Msa0309000:three_prime_UTR | 40.0% | |
| TATCCCAAATTTAGGGGTGA+GGG | + | chr2_4:3446350-3446369 | Msa0309000:three_prime_UTR | 40.0% | |
| !! | TACCAGGAATTTGTTGTACC+CGG | + | chr2_4:3446454-3446473 | Msa0309000:three_prime_UTR | 40.0% |
| ! | TCCGATGGATGTTTTCTTTC+TGG | + | chr2_4:3446557-3446576 | Msa0309000:three_prime_UTR | 40.0% |
| CCCAGAAAGAAAACATCCAT+CGG | - | chr2_4:3446561-3446580 | None:intergenic | 40.0% | |
| ! | CCGATGGATGTTTTCTTTCT+GGG | + | chr2_4:3446558-3446577 | Msa0309000:three_prime_UTR | 40.0% |
| ! | GAGGGTTTAAGACACAGGTT+TGG | - | chr2_4:3438921-3438940 | None:intergenic | 45.0% |
| ! | TGAGAGAGGGTTTAAGACAC+AGG | - | chr2_4:3438926-3438945 | None:intergenic | 45.0% |
| GAAGAAGAAGAAGGTGAGAG+AGG | - | chr2_4:3438940-3438959 | None:intergenic | 45.0% | |
| AGCCGAGATGAAGAAGAAAG+AGG | + | chr2_4:3439004-3439023 | Msa0309000:CDS | 45.0% | |
| GAATCATGATCAGATGGAGG+CGG | - | chr2_4:3439038-3439057 | None:intergenic | 45.0% | |
| TCGGAATCATGATCAGATGG+AGG | - | chr2_4:3439041-3439060 | None:intergenic | 45.0% | |
| TTGGGAGTCAGAATTGTCGT+CGG | - | chr2_4:3439328-3439347 | None:intergenic | 45.0% | |
| GTCCAAACAGGCCGTAAATA+GGG | - | chr2_4:3439428-3439447 | None:intergenic | 45.0% | |
| TGTCCAAACAGGCCGTAAAT+AGG | - | chr2_4:3439429-3439448 | None:intergenic | 45.0% | |
| TGAAAGCTCCGATCTTCATC+AGG | + | chr2_4:3439973-3439992 | Msa0309000:CDS | 45.0% | |
| TCCTCCTTCCTGATGAAGAT+CGG | - | chr2_4:3439984-3440003 | None:intergenic | 45.0% | |
| TGCTGAGAGTGATTCATCTG+AGG | + | chr2_4:3440006-3440025 | Msa0309000:CDS | 45.0% | |
| GAGTGATTCATCTGAGGATG+AGG | + | chr2_4:3440012-3440031 | Msa0309000:CDS | 45.0% | |
| !!! | TCTGGCTCTCCTTTTTCCAT+AGG | + | chr2_4:3440113-3440132 | Msa0309000:intron | 45.0% |
| TCCTCGAAATACCATTGGAG+AGG | + | chr2_4:3440140-3440159 | Msa0309000:CDS | 45.0% | |
| ACCTCTCCAATGGTATTTCG+AGG | - | chr2_4:3440144-3440163 | None:intergenic | 45.0% | |
| CTCACTGACACATATAGGCT+AGG | + | chr2_4:3440358-3440377 | Msa0309000:intron | 45.0% | |
| CCATGTTAATATGTGGGGAC+TGG | - | chr2_4:3440735-3440754 | None:intergenic | 45.0% | |
| CCAGTCCCCACATATTAACA+TGG | + | chr2_4:3440732-3440751 | Msa0309000:intron | 45.0% | |
| TAGCTCAAACACATGAGAGG+AGG | + | chr2_4:3441167-3441186 | Msa0309000:intron | 45.0% | |
| TGCGTTAGACAATGGATGCT+TGG | - | chr2_4:3442138-3442157 | None:intergenic | 45.0% | |
| ! | ATGAACCTTCGTTTGGGTTC+GGG | - | chr2_4:3442161-3442180 | None:intergenic | 45.0% |
| CAGGTTGTGCAGTATGTTAG+AGG | + | chr2_4:3442337-3442356 | Msa0309000:intron | 45.0% | |
| CTCTTGTGGGAAGATGATTC+TGG | + | chr2_4:3442415-3442434 | Msa0309000:CDS | 45.0% | |
| ! | CACGTTTTCTTCGAACTCGA+GGG | - | chr2_4:3442858-3442877 | None:intergenic | 45.0% |
| ! | ACACGTTTTCTTCGAACTCG+AGG | - | chr2_4:3442859-3442878 | None:intergenic | 45.0% |
| GGTCGGTATCCTCACTTAAT+TGG | + | chr2_4:3443233-3443252 | Msa0309000:intron | 45.0% | |
| AAACCAGACTTACGCAGAGA+CGG | - | chr2_4:3443393-3443412 | None:intergenic | 45.0% | |
| !! | ATCCAGAAGAAGGCTCTAAG+AGG | + | chr2_4:3443677-3443696 | Msa0309000:intron | 45.0% |
| TTACTTCTGTGGAATGGCAC+CGG | + | chr2_4:3443969-3443988 | Msa0309000:CDS | 45.0% | |
| ! | CTTTTCAACAGTGATGCCAG+CGG | + | chr2_4:3444003-3444022 | Msa0309000:intron | 45.0% |
| GTGAGAGTTTCTTGGACAAC+TGG | - | chr2_4:3444514-3444533 | None:intergenic | 45.0% | |
| AGAAGATGGAACGAGATGGA+TGG | - | chr2_4:3444583-3444602 | None:intergenic | 45.0% | |
| ! | TTAATCTGCATAGGGCACTC+TGG | - | chr2_4:3444967-3444986 | None:intergenic | 45.0% |
| ATCGCCATTGCAGAGTTTAG+GGG | + | chr2_4:3445218-3445237 | Msa0309000:intron | 45.0% | |
| ATGTGTGACCTTTCAGCGAA+AGG | + | chr2_4:3445305-3445324 | Msa0309000:intron | 45.0% | |
| TTGTGTGACCTTTCGCTGAA+AGG | - | chr2_4:3445316-3445335 | None:intergenic | 45.0% | |
| TTTAGACTGTACCCATGTCC+CGG | + | chr2_4:3445536-3445555 | Msa0309000:intron | 45.0% | |
| AATAGTGTTTCCCGGGACAT+GGG | - | chr2_4:3445550-3445569 | None:intergenic | 45.0% | |
| AGCATGCTTTGCCTGTAACT+TGG | + | chr2_4:3445614-3445633 | Msa0309000:intron | 45.0% | |
| GGAGAAGTTCACCAAGTTAC+AGG | - | chr2_4:3445628-3445647 | None:intergenic | 45.0% | |
| TCTGAGCACGAAGCAAACAA+GGG | - | chr2_4:3445814-3445833 | None:intergenic | 45.0% | |
| ATCTGAGCACGAAGCAAACA+AGG | - | chr2_4:3445815-3445834 | None:intergenic | 45.0% | |
| GGGGCCATGCAAATTCAAAT+GGG | + | chr2_4:3445917-3445936 | Msa0309000:CDS | 45.0% | |
| TAAATAACCAGGGTTGCCTG+GGG | - | chr2_4:3446175-3446194 | None:intergenic | 45.0% | |
| GTAAATAACCAGGGTTGCCT+GGG | - | chr2_4:3446176-3446195 | None:intergenic | 45.0% | |
| TGTAAATAACCAGGGTTGCC+TGG | - | chr2_4:3446177-3446196 | None:intergenic | 45.0% | |
| CAACCCTGGTTATTTACAGC+TGG | + | chr2_4:3446179-3446198 | Msa0309000:CDS | 45.0% | |
| ACCCTGGTTATTTACAGCTG+GGG | + | chr2_4:3446181-3446200 | Msa0309000:CDS | 45.0% | |
| ACTCCCTCACCCCTAAATTT+GGG | - | chr2_4:3446356-3446375 | None:intergenic | 45.0% | |
| AACTCCCTCACCCCTAAATT+TGG | - | chr2_4:3446357-3446376 | None:intergenic | 45.0% | |
| ! | TCTTTCTGGGAAATGTGACG+TGG | + | chr2_4:3446571-3446590 | Msa0309000:three_prime_UTR | 45.0% |
| !! | AATGTGACGTGGAGTTGGTA+TGG | + | chr2_4:3446582-3446601 | Msa0309000:three_prime_UTR | 45.0% |
| TGAATGAGTAAGGGTGGGTG+CGG | + | chr2_4:3438856-3438875 | Msa0309000:five_prime_UTR | 50.0% | |
| CAATTCTGACTCCCAAGACG+AGG | + | chr2_4:3439332-3439351 | Msa0309000:CDS | 50.0% | |
| CACCCTATTTACGGCCTGTT+TGG | + | chr2_4:3439423-3439442 | Msa0309000:intron | 50.0% | |
| !! | TAGGACGTTGATGACTCGGA+AGG | + | chr2_4:3439944-3439963 | Msa0309000:intron | 50.0% |
| AGCTCCGATCTTCATCAGGA+AGG | + | chr2_4:3439977-3439996 | Msa0309000:CDS | 50.0% | |
| TCCGATCTTCATCAGGAAGG+AGG | + | chr2_4:3439980-3439999 | Msa0309000:CDS | 50.0% | |
| GATCTTCATCAGGAAGGAGG+AGG | + | chr2_4:3439983-3440002 | Msa0309000:CDS | 50.0% | |
| ! | GGCTCTCCTTTTTCCATAGG+TGG | + | chr2_4:3440116-3440135 | Msa0309000:intron | 50.0% |
| GAGGAGCCACCTATGGAAAA+AGG | - | chr2_4:3440125-3440144 | None:intergenic | 50.0% | |
| GTATTTCGAGGAGCCACCTA+TGG | - | chr2_4:3440132-3440151 | None:intergenic | 50.0% | |
| GTGGCTCCTCGAAATACCAT+TGG | + | chr2_4:3440135-3440154 | Msa0309000:CDS | 50.0% | |
| CTTCAAAGGGACCTCTCCAA+TGG | - | chr2_4:3440154-3440173 | None:intergenic | 50.0% | |
| ! | TTGGAGAGGTCCCTTTGAAG+TGG | + | chr2_4:3440154-3440173 | Msa0309000:CDS | 50.0% |
| !! | GGTCCCTTTGAAGTGGTATG+AGG | + | chr2_4:3440161-3440180 | Msa0309000:CDS | 50.0% |
| AAACGGGCAGAACAAAGCAC+AGG | - | chr2_4:3440677-3440696 | None:intergenic | 50.0% | |
| TAGCTCGAACACATGAGAGG+AGG | + | chr2_4:3441280-3441299 | Msa0309000:intron | 50.0% | |
| ! | GGAAGTTTCTGCTTTGGTGC+AGG | - | chr2_4:3442475-3442494 | None:intergenic | 50.0% |
| GCACCAAAGCAGAAACTTCC+TGG | + | chr2_4:3442475-3442494 | Msa0309000:CDS | 50.0% | |
| CTATTGAAGCTTCAGGGCAG+TGG | + | chr2_4:3443152-3443171 | Msa0309000:CDS | 50.0% | |
| TGATGGAACTGTCCGTGTCT+GGG | + | chr2_4:3443274-3443293 | Msa0309000:CDS | 50.0% | |
| CAGTTTCAACCTCCCAGACA+CGG | - | chr2_4:3443289-3443308 | None:intergenic | 50.0% | |
| ! | TGGCAGATGTCTGAGACAGT+GGG | + | chr2_4:3443307-3443326 | Msa0309000:CDS | 50.0% |
| ! | TGTCTGAGACAGTGGGAGAT+TGG | + | chr2_4:3443314-3443333 | Msa0309000:CDS | 50.0% |
| CCAGTCTCATCTGATGCTTC+TGG | - | chr2_4:3443612-3443631 | None:intergenic | 50.0% | |
| !! | CCAGAAGCATCAGATGAGAC+TGG | + | chr2_4:3443609-3443628 | Msa0309000:CDS | 50.0% |
| GACCTCTTAGAGCCTTCTTC+TGG | - | chr2_4:3443682-3443701 | None:intergenic | 50.0% | |
| CTGCAAACACAAGCGTGGTT+AGG | - | chr2_4:3443784-3443803 | None:intergenic | 50.0% | |
| CTAACCACGCTTGTGTTTGC+AGG | + | chr2_4:3443782-3443801 | Msa0309000:intron | 50.0% | |
| AAATGAGGGGGATCGCATGA+CGG | - | chr2_4:3444275-3444294 | None:intergenic | 50.0% | |
| GATGGAACGAGATGGATGGA+AGG | - | chr2_4:3444579-3444598 | None:intergenic | 50.0% | |
| !! | TGACGAGGCTTCTTTGAGAC+CGG | - | chr2_4:3444675-3444694 | None:intergenic | 50.0% |
| !! | AGGATGGACTGCAATTGACG+AGG | - | chr2_4:3444690-3444709 | None:intergenic | 50.0% |
| TCGTCAATTGCAGTCCATCC+TGG | + | chr2_4:3444689-3444708 | Msa0309000:CDS | 50.0% | |
| TCAATTGCAGTCCATCCTGG+AGG | + | chr2_4:3444692-3444711 | Msa0309000:CDS | 50.0% | |
| CCATTGCAGAGTTTAGGGGA+GGG | + | chr2_4:3445222-3445241 | Msa0309000:intron | 50.0% | |
| TTAGACTGTACCCATGTCCC+GGG | + | chr2_4:3445537-3445556 | Msa0309000:intron | 50.0% | |
| GAATAGTGTTTCCCGGGACA+TGG | - | chr2_4:3445551-3445570 | None:intergenic | 50.0% | |
| ACAGGCAAAGCATGCTCACT+TGG | - | chr2_4:3445610-3445629 | None:intergenic | 50.0% | |
| TGGCCCCGTAGAATTTCCAA+AGG | - | chr2_4:3445904-3445923 | None:intergenic | 50.0% | |
| CGGGGCCATGCAAATTCAAA+TGG | + | chr2_4:3445916-3445935 | Msa0309000:CDS | 50.0% | |
| GCCCCAGCTGTAAATAACCA+GGG | - | chr2_4:3446185-3446204 | None:intergenic | 50.0% | |
| AGCCCCAGCTGTAAATAACC+AGG | - | chr2_4:3446186-3446205 | None:intergenic | 50.0% | |
| TGCCGGGTACAACAAATTCC+TGG | - | chr2_4:3446459-3446478 | None:intergenic | 50.0% | |
| TGGGAAATGTGACGTGGAGT+TGG | + | chr2_4:3446577-3446596 | Msa0309000:three_prime_UTR | 50.0% | |
| TCATGATCAGATGGAGGCGG+CGG | - | chr2_4:3439035-3439054 | None:intergenic | 55.0% | |
| GTCATCGGAGTCGTCGTCAT+CGG | - | chr2_4:3439060-3439079 | None:intergenic | 55.0% | |
| TTCTGACTCCCAAGACGAGG+AGG | + | chr2_4:3439335-3439354 | Msa0309000:CDS | 55.0% | |
| GAAGCTGACCTCCTCGTCTT+GGG | - | chr2_4:3439346-3439365 | None:intergenic | 55.0% | |
| TGAAGCTGACCTCCTCGTCT+TGG | - | chr2_4:3439347-3439366 | None:intergenic | 55.0% | |
| !! | GACGTTGATGACTCGGAAGG+TGG | + | chr2_4:3439947-3439966 | Msa0309000:CDS | 55.0% |
| GGTTCGGGTGCGTTAGACAA+TGG | - | chr2_4:3442146-3442165 | None:intergenic | 55.0% | |
| TGAAGCTTCAGGGCAGTGGA+TGG | + | chr2_4:3443156-3443175 | Msa0309000:CDS | 55.0% | |
| ! | GTGATGGAACTGTCCGTGTC+TGG | + | chr2_4:3443273-3443292 | Msa0309000:CDS | 55.0% |
| CGTGTCTGGGAGGTTGAAAC+TGG | + | chr2_4:3443287-3443306 | Msa0309000:CDS | 55.0% | |
| ! | CTGGCAGATGTCTGAGACAG+TGG | + | chr2_4:3443306-3443325 | Msa0309000:CDS | 55.0% |
| CTTGCCTGCAAACACAAGCG+TGG | - | chr2_4:3443789-3443808 | None:intergenic | 55.0% | |
| ! | TCTGTGGAATGGCACCGGAA+AGG | + | chr2_4:3443974-3443993 | Msa0309000:CDS | 55.0% |
| GCCATTGCAGAGTTTAGGGG+AGG | + | chr2_4:3445221-3445240 | Msa0309000:intron | 55.0% | |
| CCCTCCCCTAAACTCTGCAA+TGG | - | chr2_4:3445225-3445244 | None:intergenic | 55.0% | |
| TGGACTGCAAGTTTCACCCC+AGG | + | chr2_4:3446156-3446175 | Msa0309000:CDS | 55.0% | |
| ACGCACCCGAACCCAAACGA+AGG | + | chr2_4:3442153-3442172 | Msa0309000:CDS | 60.0% | |
| TCAGGGCAGTGGATGGCTTC+AGG | + | chr2_4:3443163-3443182 | Msa0309000:CDS | 60.0% | |
| TGGAACTGTCCGTGTCTGGG+AGG | + | chr2_4:3443277-3443296 | Msa0309000:CDS | 60.0% | |
| TGGCCGTCTCTGCGTAAGTC+TGG | + | chr2_4:3443387-3443406 | Msa0309000:intron | 60.0% | |
| AGTTTCACCCCAGGCAACCC+TGG | + | chr2_4:3446165-3446184 | Msa0309000:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 3438827 | 3446678 | 3438827 | ID=Msa0309000;Name=Msa0309000 |
| chr2_4 | mRNA | 3438827 | 3446678 | 3438827 | ID=Msa0309000-mRNA-1;Parent=Msa0309000;Name=Msa0309000-mRNA-1;_AED=0.10;_eAED=0.10;_QI=154|0.94|0.88|1|1|1|18|440|727 |
| chr2_4 | exon | 3438827 | 3439124 | 3438827 | ID=Msa0309000-mRNA-1:exon:1008;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3439207 | 3439356 | 3439207 | ID=Msa0309000-mRNA-1:exon:1009;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3439947 | 3440033 | 3439947 | ID=Msa0309000-mRNA-1:exon:1010;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3440135 | 3440289 | 3440135 | ID=Msa0309000-mRNA-1:exon:1011;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3441871 | 3441988 | 3441871 | ID=Msa0309000-mRNA-1:exon:1012;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3442104 | 3442205 | 3442104 | ID=Msa0309000-mRNA-1:exon:1013;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3442340 | 3442496 | 3442340 | ID=Msa0309000-mRNA-1:exon:1014;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3442590 | 3442698 | 3442590 | ID=Msa0309000-mRNA-1:exon:1015;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3442774 | 3442876 | 3442774 | ID=Msa0309000-mRNA-1:exon:1016;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3443034 | 3443184 | 3443034 | ID=Msa0309000-mRNA-1:exon:1017;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3443267 | 3443399 | 3443267 | ID=Msa0309000-mRNA-1:exon:1018;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3443524 | 3443630 | 3443524 | ID=Msa0309000-mRNA-1:exon:1019;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3443804 | 3443874 | 3443804 | ID=Msa0309000-mRNA-1:exon:1020;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3443965 | 3443995 | 3443965 | ID=Msa0309000-mRNA-1:exon:1021;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3444501 | 3444713 | 3444501 | ID=Msa0309000-mRNA-1:exon:1022;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3444820 | 3444904 | 3444820 | ID=Msa0309000-mRNA-1:exon:1023;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3445765 | 3445943 | 3445765 | ID=Msa0309000-mRNA-1:exon:1024;Parent=Msa0309000-mRNA-1 |
| chr2_4 | exon | 3446150 | 3446678 | 3446150 | ID=Msa0309000-mRNA-1:exon:1025;Parent=Msa0309000-mRNA-1 |
| chr2_4 | five_prime_UTR | 3438827 | 3438980 | 3438827 | ID=Msa0309000-mRNA-1:five_prime_utr;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3438981 | 3439124 | 3438981 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3439207 | 3439356 | 3439207 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3439947 | 3440033 | 3439947 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3440135 | 3440289 | 3440135 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3441871 | 3441988 | 3441871 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3442104 | 3442205 | 3442104 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3442340 | 3442496 | 3442340 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3442590 | 3442698 | 3442590 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3442774 | 3442876 | 3442774 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3443034 | 3443184 | 3443034 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3443267 | 3443399 | 3443267 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3443524 | 3443630 | 3443524 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3443804 | 3443874 | 3443804 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3443965 | 3443995 | 3443965 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3444501 | 3444713 | 3444501 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3444820 | 3444904 | 3444820 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3445765 | 3445943 | 3445765 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | CDS | 3446150 | 3446238 | 3446150 | ID=Msa0309000-mRNA-1:cds;Parent=Msa0309000-mRNA-1 |
| chr2_4 | three_prime_UTR | 3446239 | 3446678 | 3446239 | ID=Msa0309000-mRNA-1:three_prime_utr;Parent=Msa0309000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
