Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188440 | XP_003592947.3 | 89.262 | 745 | 13 | 5 | 1 | 678 | 1 | 745 | 0.0 | 1328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188440 | sp|F4IH25|BOP1_ARATH | 64.723 | 686 | 199 | 10 | 24 | 677 | 79 | 753 | 0.0 | 899 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188440 | Q2PEP5 | 82.055 | 730 | 74 | 4 | 5 | 678 | 10 | 738 | 0.0 | 1188 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030200 | Msa0188440 | 0.802661 | 5.047117e-49 | -8.615850e-47 |
| Msa0164770 | Msa0188440 | 0.879822 | 9.099871e-70 | -8.615850e-47 |
| Msa0170200 | Msa0188440 | 0.806904 | 6.558543e-50 | -8.615850e-47 |
| Msa0188440 | Msa0231030 | 0.909771 | 3.937485e-82 | -8.615850e-47 |
| Msa0188440 | Msa0270550 | 0.901422 | 2.722228e-78 | -8.615850e-47 |
| Msa0188440 | Msa0309000 | 0.816565 | 5.179111e-52 | -8.615850e-47 |
| Msa0188440 | Msa0375310 | 0.813101 | 3.035639e-51 | -8.615850e-47 |
| Msa0188440 | Msa0407200 | 0.819418 | 1.173776e-52 | -8.615850e-47 |
| Msa0188440 | Msa0421500 | 0.816565 | 5.178425e-52 | -8.615850e-47 |
| Msa0188440 | Msa0450710 | 0.803983 | 2.686618e-49 | -8.615850e-47 |
| Msa0188440 | Msa0485510 | 0.815219 | 1.034254e-51 | -8.615850e-47 |
| Msa0188440 | Msa0556250 | 0.814755 | 1.310575e-51 | -8.615850e-47 |
| Msa0188440 | Msa0651800 | 0.849216 | 3.729350e-60 | -8.615850e-47 |
| Msa0188440 | Msa0659050 | 0.854432 | 1.235829e-61 | -8.615850e-47 |
| Msa0188440 | Msa0660850 | 0.809828 | 1.559893e-50 | -8.615850e-47 |
| Msa0188440 | Msa0687440 | 0.824335 | 8.535835e-54 | -8.615850e-47 |
| Msa0188440 | Msa0694300 | 0.824451 | 8.016659e-54 | -8.615850e-47 |
| Msa0188440 | Msa0704980 | 0.856032 | 4.232083e-62 | -8.615850e-47 |
| Msa0188440 | Msa0745740 | 0.819444 | 1.157729e-52 | -8.615850e-47 |
| Msa0188440 | Msa0755700 | 0.803297 | 3.728870e-49 | -8.615850e-47 |
| Msa0188440 | Msa0757940 | 0.812129 | 4.951037e-51 | -8.615850e-47 |
| Msa0188440 | Msa0799260 | 0.808063 | 3.723673e-50 | -8.615850e-47 |
| Msa0188440 | Msa0799310 | 0.817607 | 3.021214e-52 | -8.615850e-47 |
| Msa0188440 | Msa0826990 | 0.825804 | 3.838064e-54 | -8.615850e-47 |
| Msa0188440 | Msa0862530 | 0.807591 | 4.690909e-50 | -8.615850e-47 |
| Msa0188440 | Msa1025460 | 0.812641 | 3.828320e-51 | -8.615850e-47 |
| Msa0188440 | Msa1211820 | 0.849805 | 2.554683e-60 | -8.615850e-47 |
| Msa0188440 | Msa1218110 | 0.818463 | 1.934596e-52 | -8.615850e-47 |
| Msa0188440 | Msa1225720 | 0.827592 | 1.437098e-54 | -8.615850e-47 |
| Msa0188440 | Msa1258390 | 0.821153 | 4.696538e-53 | -8.615850e-47 |
| Msa0188440 | Msa1299690 | 0.804104 | 2.535270e-49 | -8.615850e-47 |
| Msa0188440 | Msa1356400 | 0.830941 | 2.211880e-55 | -8.615850e-47 |
| Msa0188440 | Msa1418690 | 0.805465 | 1.317889e-49 | -8.615850e-47 |
| Msa0188440 | Msa1433590 | 0.813845 | 2.082861e-51 | -8.615850e-47 |
| Msa0188440 | Msa1444240 | 0.824143 | 9.467346e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188440 | MtrunA17_Chr2g0277311 | 88.192 | 542 | 12 | 4 | 1 | 490 | 1 | 542 | 0.0 | 944 |
| Msa0188440 | MtrunA17_Chr2g0277301 | 99.000 | 100 | 1 | 0 | 579 | 678 | 1 | 100 | 5.42e-70 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188440 | AT2G40360.1 | 64.723 | 686 | 199 | 10 | 24 | 677 | 79 | 753 | 0.0 | 899 |
| Msa0188440 | AT2G40360.2 | 65.909 | 660 | 196 | 7 | 40 | 677 | 84 | 736 | 0.0 | 896 |
Find 212 sgRNAs with CRISPR-Local
Find 493 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTGTGGGATAAATTT+AGG | 0.098465 | 2_1:-3634730 | None:intergenic |
| TAACAATTGGGGAACAAAAT+TGG | 0.139168 | 2_1:-3638357 | None:intergenic |
| GAAAGAAAGGGAAGACAAAT+TGG | 0.200648 | 2_1:+3632285 | Msa0188440:CDS |
| CCTTGATGTCATATCCAATA+TGG | 0.214290 | 2_1:-3632246 | None:intergenic |
| ACAACGTTGTTAATATCTTT+TGG | 0.224398 | 2_1:-3637824 | None:intergenic |
| AGCTTTGGCTTTAAAGATTC+AGG | 0.238489 | 2_1:-3635097 | None:intergenic |
| TATAAGGTTAAGGCATTTAA+AGG | 0.244291 | 2_1:+3635904 | Msa0188440:CDS |
| TCAATTTCTATTGAAGCTTC+AGG | 0.254166 | 2_1:+3635196 | Msa0188440:CDS |
| AAAGCTTTGTTGGTTTGATA+TGG | 0.264615 | 2_1:+3636902 | Msa0188440:CDS |
| TAAGAATCATCCTCCTTCTT+TGG | 0.272852 | 2_1:-3634442 | None:intergenic |
| ACTTACTTAAGAACTTTATA+TGG | 0.279811 | 2_1:-3636939 | None:intergenic |
| TTGGGCTCGTCTCGCTTATC+AGG | 0.283477 | 2_1:-3630926 | None:intergenic |
| GCCAAAGCTTCCAAATAAAA+AGG | 0.283788 | 2_1:+3635111 | Msa0188440:CDS |
| ACCTTTGTGGGATAAATTTA+GGG | 0.287084 | 2_1:-3634729 | None:intergenic |
| AAATCCTCTTATTGTTCCTT+TGG | 0.289726 | 2_1:+3637937 | Msa0188440:CDS |
| TTCAAAGTGGGAAGCTAAAA+AGG | 0.292304 | 2_1:+3634235 | Msa0188440:CDS |
| CTCTTGTGGGAAGATGATTC+TGG | 0.293595 | 2_1:+3634466 | Msa0188440:CDS |
| GATATGAATTAATCTCTTCT+TGG | 0.293648 | 2_1:-3634684 | None:intergenic |
| CAGCTTTCTGTTTAACAATT+GGG | 0.295383 | 2_1:-3638369 | None:intergenic |
| TTGAAAAGTAGTCACCTTTC+CGG | 0.298992 | 2_1:-3636039 | None:intergenic |
| TCATTCATTCATTCATTCAT+TGG | 0.306379 | 2_1:-3630945 | None:intergenic |
| ATGAACCTTCGTTTGGGTTC+GGG | 0.309674 | 2_1:-3634209 | None:intergenic |
| GCCACTGTTATCCCAAGTTT+AGG | 0.313002 | 2_1:+3638394 | Msa0188440:three_prime_UTR |
| TATTTGCATTGCAGGAATAT+TGG | 0.313865 | 2_1:+3638188 | Msa0188440:intron |
| AAAATTGGGAATAGAGTTAC+AGG | 0.314181 | 2_1:-3638342 | None:intergenic |
| CCAGTCTCATCTGATGCTTC+TGG | 0.319072 | 2_1:-3635660 | None:intergenic |
| ATGATAAACACGATGGTATA+AGG | 0.329604 | 2_1:+3635888 | Msa0188440:CDS |
| TCAGCTTTCTGTTTAACAAT+TGG | 0.333490 | 2_1:-3638370 | None:intergenic |
| TATTCGATATAGCATGTTAT+GGG | 0.338942 | 2_1:-3635148 | None:intergenic |
| AACAATTGGGGAACAAAATT+GGG | 0.349363 | 2_1:-3638356 | None:intergenic |
| AGAAGAACAGCAAAGGATTA+AGG | 0.351258 | 2_1:+3635617 | Msa0188440:CDS |
| TGAAGGAATGAACCTTCGTT+TGG | 0.352971 | 2_1:-3634216 | None:intergenic |
| ATATTCGATATAGCATGTTA+TGG | 0.356240 | 2_1:-3635149 | None:intergenic |
| CATTCATTCATTCATTCATT+GGG | 0.358620 | 2_1:-3630944 | None:intergenic |
| AAAAGATAAAGAAGAAAGAA+AGG | 0.359734 | 2_1:+3632272 | Msa0188440:CDS |
| TCAGGGCAGTGGATGGCTTC+AGG | 0.362455 | 2_1:+3635214 | Msa0188440:CDS |
| TTTCCCATTAACAAAACTAT+AGG | 0.362557 | 2_1:-3638433 | None:intergenic |
| TGTAAATAACCAGGGTTGCC+TGG | 0.363124 | 2_1:-3638226 | None:intergenic |
| AATGAACCTTCGTTTGGGTT+CGG | 0.364933 | 2_1:-3634210 | None:intergenic |
| CCACTGTTATCCCAAGTTTA+GGG | 0.368390 | 2_1:+3638395 | Msa0188440:three_prime_UTR |
| ACATGCTATATCGAATATAA+AGG | 0.374460 | 2_1:+3635154 | Msa0188440:CDS |
| GCACCAAAGCAGAAACTTCC+TGG | 0.381658 | 2_1:+3634526 | Msa0188440:CDS |
| TTGATGTAACTGCACCTTCA+TGG | 0.388375 | 2_1:-3635177 | None:intergenic |
| CGGGGCCATGCAAATTCAAA+TGG | 0.388895 | 2_1:+3637968 | Msa0188440:CDS |
| GAATTAATCTCTTCTTGGGT+TGG | 0.389942 | 2_1:-3634679 | None:intergenic |
| TGCCGGGTACAACAAATTCC+TGG | 0.390474 | 2_1:-3638508 | None:intergenic |
| GCGCAAACTAATGCAGAATA+AGG | 0.393235 | 2_1:+3633988 | Msa0188440:CDS |
| TACCTCTTCATCTTCGGAAA+TGG | 0.393338 | 2_1:-3631207 | None:intergenic |
| ATATGAATTAATCTCTTCTT+GGG | 0.401613 | 2_1:-3634683 | None:intergenic |
| ATCATCAACATTTGCAAGAA+AGG | 0.402378 | 2_1:-3632311 | None:intergenic |
| TTGTTCCTTTGGAAATTCTA+CGG | 0.403370 | 2_1:+3637948 | Msa0188440:CDS |
| CAACCCTGGTTATTTACAGC+TGG | 0.404320 | 2_1:+3638231 | Msa0188440:CDS |
| GTGATGGAACTGTCCGTGTC+TGG | 0.404605 | 2_1:+3635324 | Msa0188440:CDS |
| CTCTCCCATTTGAATTTGCA+TGG | 0.409359 | 2_1:-3637973 | None:intergenic |
| GACAAAAGATGAAATCAAAA+TGG | 0.410244 | 2_1:+3633964 | Msa0188440:CDS |
| ATTTCCAAAGGAACAATAAG+AGG | 0.410944 | 2_1:-3637941 | None:intergenic |
| CTTGATGTCATATCCAATAT+GGG | 0.413782 | 2_1:-3632245 | None:intergenic |
| TTCATAGCATTGTCATATGC+AGG | 0.415150 | 2_1:-3634847 | None:intergenic |
| AATTCCCTCACCCCTAAACT+TGG | 0.417254 | 2_1:-3638406 | None:intergenic |
| ATACCAGGAAGTTTCTGCTT+TGG | 0.424563 | 2_1:-3634529 | None:intergenic |
| ATGTTGATGATTCTAAGAAT+TGG | 0.428284 | 2_1:+3632323 | Msa0188440:CDS |
| GAAGGAATGAACCTTCGTTT+GGG | 0.436375 | 2_1:-3634215 | None:intergenic |
| GTGAGAGTTTCTTGGACAAC+TGG | 0.437387 | 2_1:-3636562 | None:intergenic |
| TTCCTCTTTCTTCTTCATCT+CGG | 0.439715 | 2_1:-3631105 | None:intergenic |
| ATATAGCATGTTATGGGGTA+AGG | 0.441338 | 2_1:-3635142 | None:intergenic |
| TTAATTGTGGGGAGCAAAGA+AGG | 0.442713 | 2_1:+3636879 | Msa0188440:CDS |
| GCAAAGAAGGAAAGCTTTGT+TGG | 0.443901 | 2_1:+3636892 | Msa0188440:CDS |
| TGTTCCTTTGGAAATTCTAC+GGG | 0.444924 | 2_1:+3637949 | Msa0188440:CDS |
| TATGAGGATGAACCCCATAT+TGG | 0.445423 | 2_1:+3632232 | Msa0188440:CDS |
| GTAAATAACCAGGGTTGCCT+GGG | 0.445737 | 2_1:-3638225 | None:intergenic |
| CGTGTCTGGGAGGTTGAAAC+TGG | 0.447803 | 2_1:+3635338 | Msa0188440:CDS |
| CTGGCAGATGTCTGAGACAG+TGG | 0.448817 | 2_1:+3635357 | Msa0188440:CDS |
| AACACGATGGTATAAGGTTA+AGG | 0.454384 | 2_1:+3635894 | Msa0188440:CDS |
| CTTTGTACAAATAAAGAAGA+TGG | 0.456986 | 2_1:-3636645 | None:intergenic |
| ATTATGTTGAGTGGTTCAAA+TGG | 0.460094 | 2_1:+3634156 | Msa0188440:CDS |
| TTCTGACTTTGATCCACATC+CGG | 0.460539 | 2_1:+3634018 | Msa0188440:CDS |
| AAACTTCCTTTCAAGTTACA+TGG | 0.460764 | 2_1:+3636587 | Msa0188440:CDS |
| AAAGATAAAGAAGAAAGAAA+GGG | 0.466560 | 2_1:+3632273 | Msa0188440:CDS |
| GGATGATTCTTATCTCTTGT+GGG | 0.469629 | 2_1:+3634453 | Msa0188440:CDS |
| TGAAAGCTCCGATCTTCATC+AGG | 0.471911 | 2_1:+3632028 | Msa0188440:CDS |
| GGAAGTTTCTGCTTTGGTGC+AGG | 0.474613 | 2_1:-3634523 | None:intergenic |
| TTCTTTGAAGTTGAAATGCC+AGG | 0.474782 | 2_1:+3638490 | Msa0188440:three_prime_UTR |
| GCAGGTGATAATTTAATTGT+GGG | 0.476821 | 2_1:+3636867 | Msa0188440:intron |
| CTTCTGTTAAACACTGGCTT+GGG | 0.477526 | 2_1:+3635588 | Msa0188440:CDS |
| TGGGTTGGAATATACTCTAA+AGG | 0.478484 | 2_1:-3634664 | None:intergenic |
| CAATTTCTATTGAAGCTTCA+GGG | 0.480377 | 2_1:+3635197 | Msa0188440:CDS |
| AGGATGATTCTTATCTCTTG+TGG | 0.482043 | 2_1:+3634452 | Msa0188440:CDS |
| GTATGGTAATTGATAATGAT+TGG | 0.482433 | 2_1:+3638651 | Msa0188440:three_prime_UTR |
| TCGTCAATTGCAGTCCATCC+TGG | 0.485324 | 2_1:+3636740 | Msa0188440:CDS |
| TGCAGGTGATAATTTAATTG+TGG | 0.485837 | 2_1:+3636866 | Msa0188440:intron |
| CTATTGAAGCTTCAGGGCAG+TGG | 0.486682 | 2_1:+3635203 | Msa0188440:CDS |
| TGCATATGACAATGCTATGA+AGG | 0.488709 | 2_1:+3634849 | Msa0188440:CDS |
| AAGTAAATACAGACCGGATG+TGG | 0.489461 | 2_1:-3634031 | None:intergenic |
| TTTGTGAAACTAGCTAAGCT+AGG | 0.490772 | 2_1:-3630987 | None:intergenic |
| GAAGAAGAAGAAGGTGAGAG+AGG | 0.493057 | 2_1:-3631033 | None:intergenic |
| GGATGATACCTCTTCATCTT+CGG | 0.493753 | 2_1:-3631213 | None:intergenic |
| GAGGGTTTAAGACACAGGTT+TGG | 0.494391 | 2_1:-3631014 | None:intergenic |
| TTCTTGATCATTTAGGCGGA+AGG | 0.494928 | 2_1:+3633907 | Msa0188440:intron |
| AACCCTGGTTATTTACAGCT+GGG | 0.495621 | 2_1:+3638232 | Msa0188440:CDS |
| AAGCTGTGAACTGTGTTACT+TGG | 0.496069 | 2_1:+3635390 | Msa0188440:CDS |
| CAGGTTGTGCAGTATGTTAG+AGG | 0.496768 | 2_1:+3634388 | Msa0188440:intron |
| TTATCCCAAGTTTAGGGGTG+AGG | 0.497354 | 2_1:+3638401 | Msa0188440:three_prime_UTR |
| GTCATCGGAGTCGTCGTCAT+CGG | 0.502887 | 2_1:-3631159 | None:intergenic |
| AAAGAAAGGGAAGACAAATT+GGG | 0.504818 | 2_1:+3632286 | Msa0188440:CDS |
| ATGAAAGCACAGTACCTTTG+TGG | 0.506407 | 2_1:-3634742 | None:intergenic |
| TGAGAGAGGGTTTAAGACAC+AGG | 0.511770 | 2_1:-3631019 | None:intergenic |
| TTGTACAATGGTGTTATGAA+AGG | 0.514108 | 2_1:-3638681 | None:intergenic |
| TGCGTTAGACAATGGATGCT+TGG | 0.517477 | 2_1:-3634186 | None:intergenic |
| ATCTGAGCACGAAGCAAACA+AGG | 0.519889 | 2_1:-3637864 | None:intergenic |
| TTGTGAAACTAGCTAAGCTA+GGG | 0.523162 | 2_1:-3630986 | None:intergenic |
| TGCCAGGAATTTGTTGTACC+CGG | 0.523334 | 2_1:+3638506 | Msa0188440:three_prime_UTR |
| TCATCCTCATACCACTTCAA+AGG | 0.523812 | 2_1:-3632220 | None:intergenic |
| ACTTCTGTTAAACACTGGCT+TGG | 0.523923 | 2_1:+3635587 | Msa0188440:CDS |
| AAGAAGAAGAAGGTGAGAGA+GGG | 0.524337 | 2_1:-3631032 | None:intergenic |
| AGCCCCAGCTGTAAATAACC+AGG | 0.525330 | 2_1:-3638235 | None:intergenic |
| CCATATTGGATATGACATCA+AGG | 0.525475 | 2_1:+3632246 | Msa0188440:CDS |
| CATCCTCATACCACTTCAAA+GGG | 0.526557 | 2_1:-3632219 | None:intergenic |
| ACCTCTCCAATGGTATTTCG+AGG | 0.527431 | 2_1:-3632196 | None:intergenic |
| AGCTTTCTGTTTAACAATTG+GGG | 0.527891 | 2_1:-3638368 | None:intergenic |
| ATTGTAGGACGTTGATGACT+CGG | 0.530821 | 2_1:+3631995 | Msa0188440:intron |
| CTTTATATGGTTTAGACGAA+AGG | 0.531394 | 2_1:-3636926 | None:intergenic |
| GGTCCCTTTGAAGTGGTATG+AGG | 0.533326 | 2_1:+3632216 | Msa0188440:CDS |
| CCCAGAAAGAAAACATCCAT+CGG | 0.533440 | 2_1:-3638610 | None:intergenic |
| TGACGAGGCTTCTTTGAGAC+CGG | 0.534532 | 2_1:-3636723 | None:intergenic |
| TGAAAGCACAGTACCTTTGT+GGG | 0.534624 | 2_1:-3634741 | None:intergenic |
| GGTTCGGGTGCGTTAGACAA+TGG | 0.536640 | 2_1:-3634194 | None:intergenic |
| GAGGATTATATGACTCATCA+TGG | 0.537199 | 2_1:-3634642 | None:intergenic |
| TGTCTGAGACAGTGGGAGAT+TGG | 0.541054 | 2_1:+3635365 | Msa0188440:CDS |
| ATCGAATATAAAGGCCATGA+AGG | 0.541999 | 2_1:+3635163 | Msa0188440:CDS |
| TCTTTAAGCCAGCGTACACT+AGG | 0.542961 | 2_1:-3635866 | None:intergenic |
| TCCTCCTTCCTGATGAAGAT+CGG | 0.543589 | 2_1:-3632036 | None:intergenic |
| CATGCAGAATGTTACTTCTG+TGG | 0.543641 | 2_1:+3636009 | Msa0188440:intron |
| GAGTGATTCATCTGAGGATG+AGG | 0.544074 | 2_1:+3632067 | Msa0188440:CDS |
| AATGTGACGTGGAGTTGGTA+TGG | 0.545186 | 2_1:+3638634 | Msa0188440:three_prime_UTR |
| AGAAGATGGAACGAGATGGA+TGG | 0.545362 | 2_1:-3636631 | None:intergenic |
| AATGAATGAATGAATGAATG+AGG | 0.549421 | 2_1:+3630951 | Msa0188440:five_prime_UTR |
| TTCCATTTCCGAAGATGAAG+AGG | 0.549861 | 2_1:+3631205 | Msa0188440:CDS |
| AGTTTCACCCCAGGCAACCC+TGG | 0.550056 | 2_1:+3638217 | Msa0188440:CDS |
| GGAAACTTCAACACTGTCAT+CGG | 0.555060 | 2_1:-3631174 | None:intergenic |
| GTTTAAGACACAGGTTTGGT+TGG | 0.561495 | 2_1:-3631010 | None:intergenic |
| GCAAGTCCATGTAACTTGAA+AGG | 0.563238 | 2_1:-3636593 | None:intergenic |
| TATCCCAAGTTTAGGGGTGA+GGG | 0.563414 | 2_1:+3638402 | Msa0188440:three_prime_UTR |
| GTGGCTCCTCGAAATACCAT+TGG | 0.564896 | 2_1:+3632190 | Msa0188440:CDS |
| GGGGCCATGCAAATTCAAAT+GGG | 0.565061 | 2_1:+3637969 | Msa0188440:CDS |
| TTACTTCTGTGGAATGGCAC+CGG | 0.567545 | 2_1:+3636020 | Msa0188440:CDS |
| TGGGAAATGTGACGTGGAGT+TGG | 0.568365 | 2_1:+3638629 | Msa0188440:three_prime_UTR |
| TGAAGCTTCAGGGCAGTGGA+TGG | 0.570556 | 2_1:+3635207 | Msa0188440:CDS |
| CCAGAAGCATCAGATGAGAC+TGG | 0.571285 | 2_1:+3635660 | Msa0188440:CDS |
| GATGGAACGAGATGGATGGA+AGG | 0.576040 | 2_1:-3636627 | None:intergenic |
| ACCCTGGTTATTTACAGCTG+GGG | 0.577398 | 2_1:+3638233 | Msa0188440:CDS |
| TTATGTTGAGTGGTTCAAAT+GGG | 0.579837 | 2_1:+3634157 | Msa0188440:CDS |
| CATATTGGATATGACATCAA+GGG | 0.580562 | 2_1:+3632247 | Msa0188440:CDS |
| TCATGATCAGATGGAGGCGG+CGG | 0.582878 | 2_1:-3631131 | None:intergenic |
| GAAGGTTCATTCCTTCAAAG+TGG | 0.585876 | 2_1:+3634222 | Msa0188440:CDS |
| AAGGTTCATTCCTTCAAAGT+GGG | 0.586722 | 2_1:+3634223 | Msa0188440:CDS |
| CACTGTTATCCCAAGTTTAG+GGG | 0.588484 | 2_1:+3638396 | Msa0188440:three_prime_UTR |
| TTCGGAAATGGAATCGTAGT+CGG | 0.588585 | 2_1:-3631195 | None:intergenic |
| TCTGTCTGATATTCATATTG+TGG | 0.589903 | 2_1:+3635418 | Msa0188440:CDS |
| TCGGAATCATCATGATCAGA+TGG | 0.590859 | 2_1:-3631140 | None:intergenic |
| TGGACTGCAAGTTTCACCCC+AGG | 0.591777 | 2_1:+3638208 | Msa0188440:CDS |
| GATGTACTTCTGTTAAACAC+TGG | 0.592024 | 2_1:+3635582 | Msa0188440:CDS |
| TGAGTACAATGATGAGGAAG+TGG | 0.592725 | 2_1:+3633937 | Msa0188440:CDS |
| TTGGAGAGGTCCCTTTGAAG+TGG | 0.595478 | 2_1:+3632209 | Msa0188440:CDS |
| TGATGGAACTGTCCGTGTCT+GGG | 0.597835 | 2_1:+3635325 | Msa0188440:CDS |
| GATCTTCATCAGGAAGGAGG+AGG | 0.602770 | 2_1:+3632038 | Msa0188440:CDS |
| GACGTTGATGACTCGGAAGG+TGG | 0.608124 | 2_1:+3632002 | Msa0188440:CDS |
| CATGCAAATTCAAATGGGAG+AGG | 0.611790 | 2_1:+3637974 | Msa0188440:CDS |
| AGCCGAGATGAAGAAGAAAG+AGG | 0.612426 | 2_1:+3631103 | Msa0188440:CDS |
| CTTCAAAGGGACCTCTCCAA+TGG | 0.612908 | 2_1:-3632206 | None:intergenic |
| TAATAACAATACCTCCAGGA+TGG | 0.614469 | 2_1:-3636754 | None:intergenic |
| TCATCATGATCAGATGGAGG+CGG | 0.614782 | 2_1:-3631134 | None:intergenic |
| ATTCCCTCACCCCTAAACTT+GGG | 0.614868 | 2_1:-3638405 | None:intergenic |
| ATAAAGAAGATGGAACGAGA+TGG | 0.615602 | 2_1:-3636635 | None:intergenic |
| TCATAGCATTGTCATATGCA+GGG | 0.615965 | 2_1:-3634846 | None:intergenic |
| TCTGTGGAATGGCACCGGAA+AGG | 0.618310 | 2_1:+3636025 | Msa0188440:CDS |
| ATGAATGAATGAATGAATGA+GGG | 0.619469 | 2_1:+3630952 | Msa0188440:five_prime_UTR |
| AAACCAGACTTACGCAGAGA+CGG | 0.621759 | 2_1:-3635441 | None:intergenic |
| TGGCAGATGTCTGAGACAGT+GGG | 0.626311 | 2_1:+3635358 | Msa0188440:CDS |
| CAGTTTCAACCTCCCAGACA+CGG | 0.626919 | 2_1:-3635337 | None:intergenic |
| AGCTCCGATCTTCATCAGGA+AGG | 0.628030 | 2_1:+3632032 | Msa0188440:CDS |
| TATGTTAGAGGAATTCGCAA+TGG | 0.631262 | 2_1:+3634400 | Msa0188440:CDS |
| CAGGTGATAATTTAATTGTG+GGG | 0.633645 | 2_1:+3636868 | Msa0188440:intron |
| GTTGGAATATACTCTAAAGG+AGG | 0.636366 | 2_1:-3634661 | None:intergenic |
| TCCGATCTTCATCAGGAAGG+AGG | 0.636888 | 2_1:+3632035 | Msa0188440:CDS |
| ATATTGGATATGACATCAAG+GGG | 0.637046 | 2_1:+3632248 | Msa0188440:CDS |
| TCCTCGAAATACCATTGGAG+AGG | 0.637496 | 2_1:+3632195 | Msa0188440:CDS |
| AGAAAGCACCTAGTGTACGC+TGG | 0.647760 | 2_1:+3635858 | Msa0188440:CDS |
| TCTTTCTGGGAAATGTGACG+TGG | 0.650218 | 2_1:+3638623 | Msa0188440:three_prime_UTR |
| ATTCGATATAGCATGTTATG+GGG | 0.653568 | 2_1:-3635147 | None:intergenic |
| TTGATGTCATATCCAATATG+GGG | 0.658360 | 2_1:-3632244 | None:intergenic |
| CTTTGATGAGTACAATGATG+AGG | 0.661806 | 2_1:+3633931 | Msa0188440:CDS |
| GTGATGAAGAAGAACAGCAA+AGG | 0.662428 | 2_1:+3635610 | Msa0188440:CDS |
| ATGTGCAGGATTATGTTGAG+TGG | 0.665536 | 2_1:+3634147 | Msa0188440:intron |
| CTTAAAGATGATAAACACGA+TGG | 0.672298 | 2_1:+3635881 | Msa0188440:CDS |
| AGGATGGACTGCAATTGACG+AGG | 0.675101 | 2_1:-3636738 | None:intergenic |
| AGAATGTTACTTCTGTGGAA+TGG | 0.676838 | 2_1:+3636014 | Msa0188440:intron |
| GAATCATCATGATCAGATGG+AGG | 0.677781 | 2_1:-3631137 | None:intergenic |
| TGCTGAGAGTGATTCATCTG+AGG | 0.679468 | 2_1:+3632061 | Msa0188440:CDS |
| GCCCCAGCTGTAAATAACCA+GGG | 0.684465 | 2_1:-3638234 | None:intergenic |
| ACAATATGAATATCAGACAG+AGG | 0.684612 | 2_1:-3635416 | None:intergenic |
| TAGGACGTTGATGACTCGGA+AGG | 0.686071 | 2_1:+3631999 | Msa0188440:intron |
| TGGCCCCGTAGAATTTCCAA+AGG | 0.689804 | 2_1:-3637953 | None:intergenic |
| TAAATAACCAGGGTTGCCTG+GGG | 0.690591 | 2_1:-3638224 | None:intergenic |
| GCCCTAAATTTATCCCACAA+AGG | 0.699342 | 2_1:+3634728 | Msa0188440:CDS |
| ACGCACCCGAACCCAAACGA+AGG | 0.702076 | 2_1:+3634204 | Msa0188440:CDS |
| TTTGTGGGATAAATTTAGGG+CGG | 0.703720 | 2_1:-3634726 | None:intergenic |
| CCCTAAACTTGGGATAACAG+TGG | 0.711826 | 2_1:-3638395 | None:intergenic |
| TCTGAGCACGAAGCAAACAA+GGG | 0.712455 | 2_1:-3637863 | None:intergenic |
| TGTGGATCAAAGTCAGAATG+TGG | 0.716263 | 2_1:-3634013 | None:intergenic |
| TGGAACTGTCCGTGTCTGGG+AGG | 0.720097 | 2_1:+3635328 | Msa0188440:CDS |
| TCAATTGCAGTCCATCCTGG+AGG | 0.730857 | 2_1:+3636743 | Msa0188440:CDS |
| GTTCCTTTGGAAATTCTACG+GGG | 0.734441 | 2_1:+3637950 | Msa0188440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATGTTTATAATCA+AGG | - | chr2_1:3635467-3635486 | None:intergenic | 10.0% |
| !!! | TATAATTAAAATTTTAGTTG+GGG | - | chr2_1:3635779-3635798 | None:intergenic | 10.0% |
| !!! | CTATAATTAAAATTTTAGTT+GGG | - | chr2_1:3635780-3635799 | None:intergenic | 10.0% |
| !!! | TCTATAATTAAAATTTTAGT+TGG | - | chr2_1:3635781-3635800 | None:intergenic | 10.0% |
| !! | TTTAAAAAATTGTTTATATG+AGG | - | chr2_1:3636407-3636426 | None:intergenic | 10.0% |
| !!! | ATATAAACAATTTTTTAAAC+TGG | + | chr2_1:3636408-3636427 | Msa0188440:intron | 10.0% |
| !!! | ATTTATCAAAATATTTTTAG+TGG | - | chr2_1:3638287-3638306 | None:intergenic | 10.0% |
| !!! | TACAATTTTTTTGTAATATT+TGG | + | chr2_1:3638699-3638718 | Msa0188440:three_prime_UTR | 10.0% |
| !! | AACTTCTAATCATATATAAA+AGG | + | chr2_1:3632959-3632978 | Msa0188440:intron | 15.0% |
| !!! | GAAATTTCTAAAAATATTGT+TGG | - | chr2_1:3633577-3633596 | None:intergenic | 15.0% |
| !!! | ACAATATTTTTAGAAATTTC+AGG | + | chr2_1:3633577-3633596 | Msa0188440:intron | 15.0% |
| !!! | AGTATTTTAAATTTTTCAGT+CGG | + | chr2_1:3633725-3633744 | Msa0188440:intron | 15.0% |
| !!! | AGTATTTTAAATTTTTCAGT+CGG | + | chr2_1:3633725-3633744 | Msa0188440:intron | 15.0% |
| !!! | TAATATTACCTTTTCTTTTT+CGG | + | chr2_1:3634582-3634601 | Msa0188440:intron | 15.0% |
| !!! | AATTTTAATTATAGAAAAGC+AGG | + | chr2_1:3635786-3635805 | Msa0188440:intron | 15.0% |
| !! | AAACAAAGAAAGTAAAAAAA+AGG | - | chr2_1:3637146-3637165 | None:intergenic | 15.0% |
| !! | ACAATAAAAAAAAAAAGTCA+AGG | - | chr2_1:3637195-3637214 | None:intergenic | 15.0% |
| !!! | CTTTTTTATCATTCAAATAA+AGG | - | chr2_1:3637318-3637337 | None:intergenic | 15.0% |
| !!! | CTTTATTTGAATGATAAAAA+AGG | + | chr2_1:3637316-3637335 | Msa0188440:intron | 15.0% |
| !! | AATTCTAATTACAAATATGT+CGG | - | chr2_1:3637437-3637456 | None:intergenic | 15.0% |
| !!! | TTTATTTTTCCTTTAGTTTA+TGG | + | chr2_1:3637512-3637531 | Msa0188440:intron | 15.0% |
| !! | TTAAAATATTGTCTGATATT+TGG | + | chr2_1:3638029-3638048 | Msa0188440:intron | 15.0% |
| !! | ATTACAAAAAAATTGTACAA+TGG | - | chr2_1:3638696-3638715 | None:intergenic | 15.0% |
| !! | TATAAAACTTAACTACTCAT+GGG | - | chr2_1:3631811-3631830 | None:intergenic | 20.0% |
| !! | TTATAAAACTTAACTACTCA+TGG | - | chr2_1:3631812-3631831 | None:intergenic | 20.0% |
| !! | CTATTATGATATCTATAACT+AGG | + | chr2_1:3631921-3631940 | Msa0188440:intron | 20.0% |
| !! | TGTTCAAAATCAATTATTGT+AGG | + | chr2_1:3631980-3631999 | Msa0188440:intron | 20.0% |
| !! | AATTCCCATTTATATTACTA+TGG | + | chr2_1:3632129-3632148 | Msa0188440:intron | 20.0% |
| !! | AAAAGATAAAGAAGAAAGAA+AGG | + | chr2_1:3632272-3632291 | Msa0188440:CDS | 20.0% |
| !! | AAAGATAAAGAAGAAAGAAA+GGG | + | chr2_1:3632273-3632292 | Msa0188440:CDS | 20.0% |
| !! | AAAGAATGCAATAATGAAAA+TGG | - | chr2_1:3632388-3632407 | None:intergenic | 20.0% |
| !! | TTATCATCAAATGATGTAAA+CGG | - | chr2_1:3632751-3632770 | None:intergenic | 20.0% |
| !!! | ATCATTGAATAATTTGTCTT+AGG | + | chr2_1:3633482-3633501 | Msa0188440:intron | 20.0% |
| !! | GAAAAAAAGTAAACACAAAT+TGG | - | chr2_1:3633625-3633644 | None:intergenic | 20.0% |
| !! | TGTGAAATAATATCACAATA+GGG | - | chr2_1:3633843-3633862 | None:intergenic | 20.0% |
| !! | TTGTGAAATAATATCACAAT+AGG | - | chr2_1:3633844-3633863 | None:intergenic | 20.0% |
| !! | ATTGTGATATTATTTCACAA+TGG | + | chr2_1:3633844-3633863 | Msa0188440:intron | 20.0% |
| !!! | TAATTTGAAATAAGTCGATT+AGG | + | chr2_1:3634287-3634306 | Msa0188440:intron | 20.0% |
| !! | AAGGAAATTATTAACATCAA+AGG | - | chr2_1:3634610-3634629 | None:intergenic | 20.0% |
| !! | ATATGAATTAATCTCTTCTT+GGG | - | chr2_1:3634686-3634705 | None:intergenic | 20.0% |
| !! | AGTAAATCAGTTCTTTAATA+CGG | - | chr2_1:3634943-3634962 | None:intergenic | 20.0% |
| !!! | GATGTTAATAGTGAATATTT+TGG | + | chr2_1:3635243-3635262 | Msa0188440:intron | 20.0% |
| !! | AGCTAATAAATCAACAATAA+AGG | - | chr2_1:3636084-3636103 | None:intergenic | 20.0% |
| !!! | GTTGATTTATTAGCTAATAA+TGG | + | chr2_1:3636089-3636108 | Msa0188440:intron | 20.0% |
| !! | AATAACAATAATGCACTTAA+AGG | + | chr2_1:3636168-3636187 | Msa0188440:intron | 20.0% |
| !!! | TTAGCTGATTTTTTATCTTA+AGG | + | chr2_1:3636448-3636467 | Msa0188440:intron | 20.0% |
| !! | TATCTTAAGGAAAATTTATG+AGG | + | chr2_1:3636461-3636480 | Msa0188440:intron | 20.0% |
| !! | ACTTACTTAAGAACTTTATA+TGG | - | chr2_1:3636942-3636961 | None:intergenic | 20.0% |
| !! | TGTATAATTTAATCTGCATA+GGG | - | chr2_1:3637026-3637045 | None:intergenic | 20.0% |
| !!! | TATCTATCATTGATTCATTT+TGG | + | chr2_1:3637564-3637583 | Msa0188440:intron | 20.0% |
| !! | TTGAAAAAAGACTACTAAAA+AGG | + | chr2_1:3637624-3637643 | Msa0188440:intron | 20.0% |
| !!! | AACTTGTTATAAAAAATCTG+TGG | - | chr2_1:3637784-3637803 | None:intergenic | 20.0% |
| !!! | TGTTTTTGATTTTGTTAACT+TGG | + | chr2_1:3638006-3638025 | Msa0188440:intron | 20.0% |
| ! | CATTCATTCATTCATTCATT+GGG | - | chr2_1:3630947-3630966 | None:intergenic | 25.0% |
| ! | TCATTCATTCATTCATTCAT+TGG | - | chr2_1:3630948-3630967 | None:intergenic | 25.0% |
| ! | AATGAATGAATGAATGAATG+AGG | + | chr2_1:3630947-3630966 | Msa0188440:five_prime_UTR | 25.0% |
| ! | ATGAATGAATGAATGAATGA+GGG | + | chr2_1:3630948-3630967 | Msa0188440:five_prime_UTR | 25.0% |
| ! | TATAGATATCATAATAGCAG+AGG | - | chr2_1:3631918-3631937 | None:intergenic | 25.0% |
| ! | TTATGATATCTATAACTAGG+AGG | + | chr2_1:3631924-3631943 | Msa0188440:intron | 25.0% |
| ! | ATAGAAAAAGAACAACAACA+CGG | - | chr2_1:3631951-3631970 | None:intergenic | 25.0% |
| !! | TAATTATAATGATGACGAAG+AGG | - | chr2_1:3632097-3632116 | None:intergenic | 25.0% |
| ! | AGGTCCATAGTAATATAAAT+GGG | - | chr2_1:3632136-3632155 | None:intergenic | 25.0% |
| !!! | ATGTTGATGATTCTAAGAAT+TGG | + | chr2_1:3632323-3632342 | Msa0188440:CDS | 25.0% |
| ! | TGCATATATCTGTAATACAT+TGG | + | chr2_1:3632533-3632552 | Msa0188440:intron | 25.0% |
| !!! | TTGGTGTCAAGTTTTTTTTT+TGG | + | chr2_1:3632592-3632611 | Msa0188440:intron | 25.0% |
| ! | TATCATCAAATGATGTAAAC+GGG | - | chr2_1:3632750-3632769 | None:intergenic | 25.0% |
| ! | GTTTACCAAAAAAACAATGA+TGG | + | chr2_1:3633173-3633192 | Msa0188440:intron | 25.0% |
| !!! | TTCATCCATCATTGTTTTTT+TGG | - | chr2_1:3633181-3633200 | None:intergenic | 25.0% |
| ! | TATGTAATCAACTCTTTAAC+TGG | - | chr2_1:3633263-3633282 | None:intergenic | 25.0% |
| !! | TTAAAGAGTTGATTACATAC+AGG | + | chr2_1:3633264-3633283 | Msa0188440:intron | 25.0% |
| ! | TATGTAATCAACTCTTTAAC+TGG | - | chr2_1:3633263-3633282 | None:intergenic | 25.0% |
| ! | TCTTTATAATAGCCTAACAT+GGG | - | chr2_1:3633445-3633464 | None:intergenic | 25.0% |
| ! | TTCTTTATAATAGCCTAACA+TGG | - | chr2_1:3633446-3633465 | None:intergenic | 25.0% |
| ! | ATTTGTCTTAGGAACATAAT+TGG | + | chr2_1:3633493-3633512 | Msa0188440:intron | 25.0% |
| ! | TAAAAATATTGTTGGTACAC+TGG | - | chr2_1:3633569-3633588 | None:intergenic | 25.0% |
| !! | TACTGAAATCATGACTATTT+TGG | - | chr2_1:3633709-3633728 | None:intergenic | 25.0% |
| ! | GTGAAATAATATCACAATAG+GGG | - | chr2_1:3633842-3633861 | None:intergenic | 25.0% |
| !! | GCTTTTATTCTTGATCATTT+AGG | + | chr2_1:3633900-3633919 | Msa0188440:intron | 25.0% |
| ! | TTTATTCTTGATCATTTAGG+CGG | + | chr2_1:3633903-3633922 | Msa0188440:intron | 25.0% |
| ! | GACAAAAGATGAAATCAAAA+TGG | + | chr2_1:3633964-3633983 | Msa0188440:CDS | 25.0% |
| !!! | TTTTGAAACTCAATTAGCAT+GGG | + | chr2_1:3634095-3634114 | Msa0188440:intron | 25.0% |
| ! | ACAAAACAGATATGCATTTA+AGG | - | chr2_1:3634126-3634145 | None:intergenic | 25.0% |
| !! | ATAATTTCCTTTTACTTCTC+AGG | + | chr2_1:3634619-3634638 | Msa0188440:intron | 25.0% |
| ! | GATATGAATTAATCTCTTCT+TGG | - | chr2_1:3634687-3634706 | None:intergenic | 25.0% |
| ! | AATAATACATTTCAATTGCC+AGG | + | chr2_1:3634803-3634822 | Msa0188440:intron | 25.0% |
| ! | TATTCGATATAGCATGTTAT+GGG | - | chr2_1:3635151-3635170 | None:intergenic | 25.0% |
| ! | ATATTCGATATAGCATGTTA+TGG | - | chr2_1:3635152-3635171 | None:intergenic | 25.0% |
| ! | ACATGCTATATCGAATATAA+AGG | + | chr2_1:3635154-3635173 | Msa0188440:CDS | 25.0% |
| !!! | GAAGATTCAACATTGATTTA+TGG | - | chr2_1:3635548-3635567 | None:intergenic | 25.0% |
| ! | AATGTTGAATCTTCCATTTA+GGG | + | chr2_1:3635554-3635573 | Msa0188440:intron | 25.0% |
| !! | TATAAGGTTAAGGCATTTAA+AGG | + | chr2_1:3635904-3635923 | Msa0188440:CDS | 25.0% |
| ! | GTATTTATATTGAACCTTAG+TGG | + | chr2_1:3635979-3635998 | Msa0188440:intron | 25.0% |
| !!! | GTGCATTATTGTTATTTCAA+CGG | - | chr2_1:3636164-3636183 | None:intergenic | 25.0% |
| !! | AGGCATACAATTTTAAACTT+GGG | + | chr2_1:3636481-3636500 | Msa0188440:intron | 25.0% |
| ! | TTCACGTAAAGAATATGTTA+AGG | - | chr2_1:3636522-3636541 | None:intergenic | 25.0% |
| ! | CTTTGTACAAATAAAGAAGA+TGG | - | chr2_1:3636648-3636667 | None:intergenic | 25.0% |
| ! | CAAATAAAAAAGCTTGATAC+CGG | + | chr2_1:3636704-3636723 | Msa0188440:CDS | 25.0% |
| ! | GTGTATAATTTAATCTGCAT+AGG | - | chr2_1:3637027-3637046 | None:intergenic | 25.0% |
| !! | GTACAAATCTTTGAAAAATG+AGG | + | chr2_1:3637227-3637246 | Msa0188440:intron | 25.0% |
| ! | AAAAAGGTCATTATACTACT+TGG | + | chr2_1:3637332-3637351 | Msa0188440:intron | 25.0% |
| ! | TTATTTGATTAGCAGCAATT+TGG | + | chr2_1:3637724-3637743 | Msa0188440:intron | 25.0% |
| !! | ACAACGTTGTTAATATCTTT+TGG | - | chr2_1:3637827-3637846 | None:intergenic | 25.0% |
| !!! | ATGATATTGACTTCTAAAAG+AGG | - | chr2_1:3638075-3638094 | None:intergenic | 25.0% |
| !!! | TCTTTTAGAAGTCAATATCA+TGG | + | chr2_1:3638074-3638093 | Msa0188440:intron | 25.0% |
| ! | TTTCCCATTAACAAAACTAT+AGG | - | chr2_1:3638436-3638455 | None:intergenic | 25.0% |
| !!! | ATCAATTTTAAGAAATCCGA+TGG | + | chr2_1:3638594-3638613 | Msa0188440:three_prime_UTR | 25.0% |
| !!! | GTATGGTAATTGATAATGAT+TGG | + | chr2_1:3638651-3638670 | Msa0188440:three_prime_UTR | 25.0% |
| TGTAACGATGAAGAAAAAGA+CGG | + | chr2_1:3631073-3631092 | Msa0188440:exon | 30.0% | |
| TCTGAATTAGAACATGAAGA+AGG | + | chr2_1:3631369-3631388 | Msa0188440:intron | 30.0% | |
| GAAGTTGTTGAATCGAAATT+GGG | - | chr2_1:3631493-3631512 | None:intergenic | 30.0% | |
| TGAAGTTGTTGAATCGAAAT+TGG | - | chr2_1:3631494-3631513 | None:intergenic | 30.0% | |
| !!! | GCTGTTTTTATGAGCTATAT+CGG | + | chr2_1:3631669-3631688 | Msa0188440:intron | 30.0% |
| CAGGTCCATAGTAATATAAA+TGG | - | chr2_1:3632137-3632156 | None:intergenic | 30.0% | |
| TTGATGTCATATCCAATATG+GGG | - | chr2_1:3632247-3632266 | None:intergenic | 30.0% | |
| CTTGATGTCATATCCAATAT+GGG | - | chr2_1:3632248-3632267 | None:intergenic | 30.0% | |
| CATATTGGATATGACATCAA+GGG | + | chr2_1:3632247-3632266 | Msa0188440:CDS | 30.0% | |
| ATATTGGATATGACATCAAG+GGG | + | chr2_1:3632248-3632267 | Msa0188440:CDS | 30.0% | |
| AAAGAAAGGGAAGACAAATT+GGG | + | chr2_1:3632286-3632305 | Msa0188440:CDS | 30.0% | |
| ATCATCAACATTTGCAAGAA+AGG | - | chr2_1:3632314-3632333 | None:intergenic | 30.0% | |
| TAAGTGCGTAGATTGTTAAT+AGG | + | chr2_1:3632509-3632528 | Msa0188440:intron | 30.0% | |
| ! | GGTCTTTTTACACTGTATAT+AGG | + | chr2_1:3632554-3632573 | Msa0188440:intron | 30.0% |
| !!! | TTTTTTTTTTGGTCGCTAAG+AGG | + | chr2_1:3632603-3632622 | Msa0188440:intron | 30.0% |
| GATTTACTTACAACCTTTGA+TGG | + | chr2_1:3632625-3632644 | Msa0188440:intron | 30.0% | |
| TATCTGTGTTTCTTGTACTT+GGG | + | chr2_1:3632657-3632676 | Msa0188440:intron | 30.0% | |
| ! | TGAATGATGATGTAGAAATC+TGG | + | chr2_1:3632828-3632847 | Msa0188440:intron | 30.0% |
| GAGAATTAGTGAGATATATG+AGG | - | chr2_1:3632854-3632873 | None:intergenic | 30.0% | |
| !! | GTCTTCATTTTTAAGAGAGA+AGG | - | chr2_1:3632925-3632944 | None:intergenic | 30.0% |
| !! | TCATGTGTTTGAGCTATTTT+AGG | - | chr2_1:3633220-3633239 | None:intergenic | 30.0% |
| ! | TATTTTACATGGGTCTTTCT+TGG | - | chr2_1:3633319-3633338 | None:intergenic | 30.0% |
| ! | AAGTAAACACAAATTGGTCT+CGG | - | chr2_1:3633619-3633638 | None:intergenic | 30.0% |
| TCGGTTTCAATGTTATAGTT+TGG | + | chr2_1:3633744-3633763 | Msa0188440:intron | 30.0% | |
| TCGGTTTCAATGTTATAGTT+TGG | + | chr2_1:3633744-3633763 | Msa0188440:intron | 30.0% | |
| GAAAGAAAGTAAATACAGAC+CGG | - | chr2_1:3634040-3634059 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAACTCAATTAGCA+TGG | + | chr2_1:3634094-3634113 | Msa0188440:intron | 30.0% |
| ! | ATATCTGTTTTGTAATGTGC+AGG | + | chr2_1:3634133-3634152 | Msa0188440:intron | 30.0% |
| ATTATGTTGAGTGGTTCAAA+TGG | + | chr2_1:3634156-3634175 | Msa0188440:CDS | 30.0% | |
| TTATGTTGAGTGGTTCAAAT+GGG | + | chr2_1:3634157-3634176 | Msa0188440:CDS | 30.0% | |
| !! | TTTGCTTTATTTGTCTAACC+TGG | - | chr2_1:3634323-3634342 | None:intergenic | 30.0% |
| ! | TGTATGTTTCTACTTTCTAC+AGG | + | chr2_1:3634369-3634388 | Msa0188440:intron | 30.0% |
| GACAGAAAAAGCAAATCATT+TGG | + | chr2_1:3634492-3634511 | Msa0188440:CDS | 30.0% | |
| ACCTTTGTGGGATAAATTTA+GGG | - | chr2_1:3634732-3634751 | None:intergenic | 30.0% | |
| TACCTTTGTGGGATAAATTT+AGG | - | chr2_1:3634733-3634752 | None:intergenic | 30.0% | |
| ATCAATATTAAGCTGGACAT+AGG | - | chr2_1:3635077-3635096 | None:intergenic | 30.0% | |
| ATTCAGGATCAATATTAAGC+TGG | - | chr2_1:3635084-3635103 | None:intergenic | 30.0% | |
| !! | TCCTTTTTATTTGGAAGCTT+TGG | - | chr2_1:3635115-3635134 | None:intergenic | 30.0% |
| ! | GGTTTAAGCTCCTTTTTATT+TGG | - | chr2_1:3635124-3635143 | None:intergenic | 30.0% |
| ATTCGATATAGCATGTTATG+GGG | - | chr2_1:3635150-3635169 | None:intergenic | 30.0% | |
| TCAATTTCTATTGAAGCTTC+AGG | + | chr2_1:3635196-3635215 | Msa0188440:CDS | 30.0% | |
| CAATTTCTATTGAAGCTTCA+GGG | + | chr2_1:3635197-3635216 | Msa0188440:CDS | 30.0% | |
| !!! | TTTTGGTTTCGATTAAACAG+TGG | + | chr2_1:3635260-3635279 | Msa0188440:intron | 30.0% |
| TCACAAAATCCAATTAAGTG+AGG | - | chr2_1:3635296-3635315 | None:intergenic | 30.0% | |
| ! | CACTTAATTGGATTTTGTGA+AGG | + | chr2_1:3635296-3635315 | Msa0188440:intron | 30.0% |
| ACAATATGAATATCAGACAG+AGG | - | chr2_1:3635419-3635438 | None:intergenic | 30.0% | |
| TCTGTCTGATATTCATATTG+TGG | + | chr2_1:3635418-3635437 | Msa0188440:CDS | 30.0% | |
| AAGTCACGTGTATATCAAAA+AGG | - | chr2_1:3635517-3635536 | None:intergenic | 30.0% | |
| CAATGTTGAATCTTCCATTT+AGG | + | chr2_1:3635553-3635572 | Msa0188440:intron | 30.0% | |
| ATGTTGAATCTTCCATTTAG+GGG | + | chr2_1:3635555-3635574 | Msa0188440:intron | 30.0% | |
| TATATGTTAACATGGGAGTT+GGG | - | chr2_1:3635755-3635774 | None:intergenic | 30.0% | |
| TTATATGTTAACATGGGAGT+TGG | - | chr2_1:3635756-3635775 | None:intergenic | 30.0% | |
| TTGGGGTTATATGTTAACAT+GGG | - | chr2_1:3635762-3635781 | None:intergenic | 30.0% | |
| AAATAACAGAACAAACTAGC+TGG | - | chr2_1:3635812-3635831 | None:intergenic | 30.0% | |
| CTTAAAGATGATAAACACGA+TGG | + | chr2_1:3635881-3635900 | Msa0188440:CDS | 30.0% | |
| ATGATAAACACGATGGTATA+AGG | + | chr2_1:3635888-3635907 | Msa0188440:CDS | 30.0% | |
| TGAGAAAACCTAACTAGAAA+TGG | - | chr2_1:3635943-3635962 | None:intergenic | 30.0% | |
| AGTCTTTATGTCTTTCAACA+TGG | + | chr2_1:3636242-3636261 | Msa0188440:intron | 30.0% | |
| ! | GAGGCATACAATTTTAAACT+TGG | + | chr2_1:3636480-3636499 | Msa0188440:intron | 30.0% |
| ! | AAGTTTTTGTGAGAGTTTCT+TGG | - | chr2_1:3636573-3636592 | None:intergenic | 30.0% |
| !! | AAACTTCCTTTCAAGTTACA+TGG | + | chr2_1:3636587-3636606 | Msa0188440:CDS | 30.0% |
| TAACTAATAACAATACCTCC+AGG | - | chr2_1:3636761-3636780 | None:intergenic | 30.0% | |
| CAATTAAATTATCACCTGCA+TGG | - | chr2_1:3636866-3636885 | None:intergenic | 30.0% | |
| TGCAGGTGATAATTTAATTG+TGG | + | chr2_1:3636866-3636885 | Msa0188440:intron | 30.0% | |
| GCAGGTGATAATTTAATTGT+GGG | + | chr2_1:3636867-3636886 | Msa0188440:intron | 30.0% | |
| CAGGTGATAATTTAATTGTG+GGG | + | chr2_1:3636868-3636887 | Msa0188440:intron | 30.0% | |
| !! | AAAGCTTTGTTGGTTTGATA+TGG | + | chr2_1:3636902-3636921 | Msa0188440:CDS | 30.0% |
| CTTTATATGGTTTAGACGAA+AGG | - | chr2_1:3636929-3636948 | None:intergenic | 30.0% | |
| TTTCTGTTGATCTTACATCA+TGG | + | chr2_1:3637078-3637097 | Msa0188440:intron | 30.0% | |
| !! | CTTATACAGAACTTTGGAAT+TGG | - | chr2_1:3637169-3637188 | None:intergenic | 30.0% |
| AGGTTTCTTATACAGAACTT+TGG | - | chr2_1:3637175-3637194 | None:intergenic | 30.0% | |
| CTAATCTCACCATAAACTAA+AGG | - | chr2_1:3637524-3637543 | None:intergenic | 30.0% | |
| TTTCAAAGAATAGTGTTTCC+CGG | - | chr2_1:3637610-3637629 | None:intergenic | 30.0% | |
| TTCTCCAGTACCTAAATAAT+GGG | + | chr2_1:3637694-3637713 | Msa0188440:intron | 30.0% | |
| TAAACAACAGCCCATTATTT+AGG | - | chr2_1:3637707-3637726 | None:intergenic | 30.0% | |
| AAATCCTCTTATTGTTCCTT+TGG | + | chr2_1:3637937-3637956 | Msa0188440:CDS | 30.0% | |
| ATTTCCAAAGGAACAATAAG+AGG | - | chr2_1:3637944-3637963 | None:intergenic | 30.0% | |
| ! | TTGTTCCTTTGGAAATTCTA+CGG | + | chr2_1:3637948-3637967 | Msa0188440:CDS | 30.0% |
| TAGAAGTCAATATCATGGTT+TGG | + | chr2_1:3638079-3638098 | Msa0188440:intron | 30.0% | |
| AGAAGTCAATATCATGGTTT+GGG | + | chr2_1:3638080-3638099 | Msa0188440:intron | 30.0% | |
| GCAATGCAAATAAACTTAAG+AGG | - | chr2_1:3638180-3638199 | None:intergenic | 30.0% | |
| CTTAAGTTTATTTGCATTGC+AGG | + | chr2_1:3638180-3638199 | Msa0188440:intron | 30.0% | |
| TATTTGCATTGCAGGAATAT+TGG | + | chr2_1:3638188-3638207 | Msa0188440:intron | 30.0% | |
| AAAATTGGGAATAGAGTTAC+AGG | - | chr2_1:3638345-3638364 | None:intergenic | 30.0% | |
| AACAATTGGGGAACAAAATT+GGG | - | chr2_1:3638359-3638378 | None:intergenic | 30.0% | |
| TAACAATTGGGGAACAAAAT+TGG | - | chr2_1:3638360-3638379 | None:intergenic | 30.0% | |
| AGCTTTCTGTTTAACAATTG+GGG | - | chr2_1:3638371-3638390 | None:intergenic | 30.0% | |
| CAGCTTTCTGTTTAACAATT+GGG | - | chr2_1:3638372-3638391 | None:intergenic | 30.0% | |
| TCAGCTTTCTGTTTAACAAT+TGG | - | chr2_1:3638373-3638392 | None:intergenic | 30.0% | |
| !!! | TCTGCCTATAGTTTTGTTAA+TGG | + | chr2_1:3638429-3638448 | Msa0188440:three_prime_UTR | 30.0% |
| !!! | CTGCCTATAGTTTTGTTAAT+GGG | + | chr2_1:3638430-3638449 | Msa0188440:three_prime_UTR | 30.0% |
| ! | AATAGTAAGCAGATTTTTGC+CGG | - | chr2_1:3638528-3638547 | None:intergenic | 30.0% |
| !! | TTGTACAATGGTGTTATGAA+AGG | - | chr2_1:3638684-3638703 | None:intergenic | 30.0% |
| TTGTGAAACTAGCTAAGCTA+GGG | - | chr2_1:3630989-3631008 | None:intergenic | 35.0% | |
| TTTGTGAAACTAGCTAAGCT+AGG | - | chr2_1:3630990-3631009 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGAAGAAGA+AGG | - | chr2_1:3631045-3631064 | None:intergenic | 35.0% | |
| TTCCTCTTTCTTCTTCATCT+CGG | - | chr2_1:3631108-3631127 | None:intergenic | 35.0% | |
| TGAAGAAAGTGAGTGAAGAA+GGG | - | chr2_1:3631237-3631256 | None:intergenic | 35.0% | |
| ATGAAGAAAGTGAGTGAAGA+AGG | - | chr2_1:3631238-3631257 | None:intergenic | 35.0% | |
| TGAGTAGTAGTAGTAGTAGT+AGG | - | chr2_1:3631402-3631421 | None:intergenic | 35.0% | |
| ACTACTACTCATCATCATCA+TGG | + | chr2_1:3631411-3631430 | Msa0188440:intron | 35.0% | |
| ! | AGCTCTTTTCACCCTATTTA+CGG | + | chr2_1:3631525-3631544 | Msa0188440:intron | 35.0% |
| ! | AATAAGGTGTTTGTCCAAAC+AGG | - | chr2_1:3631551-3631570 | None:intergenic | 35.0% |
| TGAGCTATAAGCTGCAAATA+AGG | - | chr2_1:3631567-3631586 | None:intergenic | 35.0% | |
| !! | CTGACATAAGTTTTGTGAGA+CGG | - | chr2_1:3631766-3631785 | None:intergenic | 35.0% |
| TCTCACAAAACTTATGTCAG+TGG | + | chr2_1:3631766-3631785 | Msa0188440:intron | 35.0% | |
| GTGGATAAGCCAATTTAAAC+AGG | + | chr2_1:3631785-3631804 | Msa0188440:intron | 35.0% | |
| CCTTGATGTCATATCCAATA+TGG | - | chr2_1:3632249-3632268 | None:intergenic | 35.0% | |
| CCATATTGGATATGACATCA+AGG | + | chr2_1:3632246-3632265 | Msa0188440:CDS | 35.0% | |
| GAAAGAAAGGGAAGACAAAT+TGG | + | chr2_1:3632285-3632304 | Msa0188440:CDS | 35.0% | |
| TTGTACTCACTGACACATAT+AGG | + | chr2_1:3632408-3632427 | Msa0188440:intron | 35.0% | |
| !!! | TAGGTTTTGAGAGCATTTGT+TGG | + | chr2_1:3632573-3632592 | Msa0188440:intron | 35.0% |
| GATACAGTATCATCCATCAA+AGG | - | chr2_1:3632641-3632660 | None:intergenic | 35.0% | |
| GTATCTGTGTTTCTTGTACT+TGG | + | chr2_1:3632656-3632675 | Msa0188440:intron | 35.0% | |
| ACAGGACTTAACTCTAAATG+TGG | - | chr2_1:3632716-3632735 | None:intergenic | 35.0% | |
| CACATCCATGTTAATATGTG+GGG | - | chr2_1:3632797-3632816 | None:intergenic | 35.0% | |
| GCACATCCATGTTAATATGT+GGG | - | chr2_1:3632798-3632817 | None:intergenic | 35.0% | |
| TGCACATCCATGTTAATATG+TGG | - | chr2_1:3632799-3632818 | None:intergenic | 35.0% | |
| !! | TTTTTAAGAGAGAAGGACAC+TGG | - | chr2_1:3632918-3632937 | None:intergenic | 35.0% |
| TAAAAGGAAGCAGTACTTGT+AGG | + | chr2_1:3632975-3632994 | Msa0188440:intron | 35.0% | |
| TCTCACTCACTGACATATAT+AGG | - | chr2_1:3633055-3633074 | None:intergenic | 35.0% | |
| TGCACCTAACCTATATATGT+CGG | + | chr2_1:3633099-3633118 | Msa0188440:intron | 35.0% | |
| !! | CAATGATGGATGAAAAGTTG+CGG | + | chr2_1:3633187-3633206 | Msa0188440:intron | 35.0% |
| AAATAGCTCAAACACATGAG+AGG | + | chr2_1:3633221-3633240 | Msa0188440:intron | 35.0% | |
| !! | GTGTTCGAGCTATTTTACAT+GGG | - | chr2_1:3633329-3633348 | None:intergenic | 35.0% |
| !! | TGTGTTCGAGCTATTTTACA+TGG | - | chr2_1:3633330-3633349 | None:intergenic | 35.0% |
| AGTCTGATAATTGCAGATAG+AGG | + | chr2_1:3633289-3633308 | Msa0188440:intron | 35.0% | |
| ACAACAACAACAATGTCAAC+TGG | - | chr2_1:3633524-3633543 | None:intergenic | 35.0% | |
| !! | TTTTGGAGATCAGGAATCTA+TGG | - | chr2_1:3633692-3633711 | None:intergenic | 35.0% |
| !! | TCATGACTATTTTGGAGATC+AGG | - | chr2_1:3633701-3633720 | None:intergenic | 35.0% |
| CTTTGATGAGTACAATGATG+AGG | + | chr2_1:3633931-3633950 | Msa0188440:CDS | 35.0% | |
| AAGGTTCATTCCTTCAAAGT+GGG | + | chr2_1:3634223-3634242 | Msa0188440:CDS | 35.0% | |
| !!! | TTTTTAGCTTCCCACTTTGA+AGG | - | chr2_1:3634236-3634255 | None:intergenic | 35.0% |
| TTCAAAGTGGGAAGCTAAAA+AGG | + | chr2_1:3634235-3634254 | Msa0188440:CDS | 35.0% | |
| TATGTTAGAGGAATTCGCAA+TGG | + | chr2_1:3634400-3634419 | Msa0188440:CDS | 35.0% | |
| ! | AACTTTTGACAAGCCAAAGA+AGG | + | chr2_1:3634429-3634448 | Msa0188440:CDS | 35.0% |
| TAAGAATCATCCTCCTTCTT+TGG | - | chr2_1:3634445-3634464 | None:intergenic | 35.0% | |
| AGGATGATTCTTATCTCTTG+TGG | + | chr2_1:3634452-3634471 | Msa0188440:CDS | 35.0% | |
| GGATGATTCTTATCTCTTGT+GGG | + | chr2_1:3634453-3634472 | Msa0188440:CDS | 35.0% | |
| TTCAAATCACGTGTAATACC+AGG | - | chr2_1:3634547-3634566 | None:intergenic | 35.0% | |
| !! | CAAAGGTACCGAAAAAGAAA+AGG | - | chr2_1:3634593-3634612 | None:intergenic | 35.0% |
| GAGGATTATATGACTCATCA+TGG | - | chr2_1:3634645-3634664 | None:intergenic | 35.0% | |
| ! | GTTGGAATATACTCTAAAGG+AGG | - | chr2_1:3634664-3634683 | None:intergenic | 35.0% |
| ! | TGGGTTGGAATATACTCTAA+AGG | - | chr2_1:3634667-3634686 | None:intergenic | 35.0% |
| GAATTAATCTCTTCTTGGGT+TGG | - | chr2_1:3634682-3634701 | None:intergenic | 35.0% | |
| TTTGTGGGATAAATTTAGGG+CGG | - | chr2_1:3634729-3634748 | None:intergenic | 35.0% | |
| TCATAGCATTGTCATATGCA+GGG | - | chr2_1:3634849-3634868 | None:intergenic | 35.0% | |
| TTCATAGCATTGTCATATGC+AGG | - | chr2_1:3634850-3634869 | None:intergenic | 35.0% | |
| TGCATATGACAATGCTATGA+AGG | + | chr2_1:3634849-3634868 | Msa0188440:CDS | 35.0% | |
| !! | AGCTTTGGCTTTAAAGATTC+AGG | - | chr2_1:3635100-3635119 | None:intergenic | 35.0% |
| GCCAAAGCTTCCAAATAAAA+AGG | + | chr2_1:3635111-3635130 | Msa0188440:CDS | 35.0% | |
| ATATAGCATGTTATGGGGTA+AGG | - | chr2_1:3635145-3635164 | None:intergenic | 35.0% | |
| ATCGAATATAAAGGCCATGA+AGG | + | chr2_1:3635163-3635182 | Msa0188440:CDS | 35.0% | |
| ! | TTTTGTGAAGGTTCAAGTGA+TGG | + | chr2_1:3635308-3635327 | Msa0188440:intron | 35.0% |
| GATGTACTTCTGTTAAACAC+TGG | + | chr2_1:3635582-3635601 | Msa0188440:CDS | 35.0% | |
| AGAAGAACAGCAAAGGATTA+AGG | + | chr2_1:3635617-3635636 | Msa0188440:CDS | 35.0% | |
| ATAAACATCGATCCAGAAGA+AGG | + | chr2_1:3635718-3635737 | Msa0188440:intron | 35.0% | |
| GTTGGGGTTATATGTTAACA+TGG | - | chr2_1:3635763-3635782 | None:intergenic | 35.0% | |
| AACACGATGGTATAAGGTTA+AGG | + | chr2_1:3635894-3635913 | Msa0188440:CDS | 35.0% | |
| !! | ACTTGTCTCCATTTCTAGTT+AGG | + | chr2_1:3635932-3635951 | Msa0188440:intron | 35.0% |
| ! | AGAATGTTACTTCTGTGGAA+TGG | + | chr2_1:3636014-3636033 | Msa0188440:intron | 35.0% |
| TTGAAAAGTAGTCACCTTTC+CGG | - | chr2_1:3636042-3636061 | None:intergenic | 35.0% | |
| AGACATAAAGACTACTACTG+AGG | - | chr2_1:3636235-3636254 | None:intergenic | 35.0% | |
| CTAACAGCTCACTAGATAAA+TGG | - | chr2_1:3636303-3636322 | None:intergenic | 35.0% | |
| AGATCTTACATGAAATGAGG+GGG | - | chr2_1:3636338-3636357 | None:intergenic | 35.0% | |
| CAGATCTTACATGAAATGAG+GGG | - | chr2_1:3636339-3636358 | None:intergenic | 35.0% | |
| GCAGATCTTACATGAAATGA+GGG | - | chr2_1:3636340-3636359 | None:intergenic | 35.0% | |
| AGCAGATCTTACATGAAATG+AGG | - | chr2_1:3636341-3636360 | None:intergenic | 35.0% | |
| ATAAAGAAGATGGAACGAGA+TGG | - | chr2_1:3636638-3636657 | None:intergenic | 35.0% | |
| TAATAACAATACCTCCAGGA+TGG | - | chr2_1:3636757-3636776 | None:intergenic | 35.0% | |
| ! | TCATTTGCATTGATAGCACA+TGG | - | chr2_1:3637049-3637068 | None:intergenic | 35.0% |
| AGGTGACAGTTGTGAAATTA+AGG | - | chr2_1:3637126-3637145 | None:intergenic | 35.0% | |
| TTCAAAGAATAGTGTTTCCC+GGG | - | chr2_1:3637609-3637628 | None:intergenic | 35.0% | |
| CTTCTCCAGTACCTAAATAA+TGG | + | chr2_1:3637693-3637712 | Msa0188440:intron | 35.0% | |
| !! | TAACAAGTTGATGTCATTGC+AGG | + | chr2_1:3637795-3637814 | Msa0188440:intron | 35.0% |
| ! | TGCACTGCATATGTTTTTCA+CGG | + | chr2_1:3637890-3637909 | Msa0188440:CDS | 35.0% |
| ! | TGCATATGTTTTTCACGGAA+TGG | + | chr2_1:3637895-3637914 | Msa0188440:CDS | 35.0% |
| ! | TGTTCCTTTGGAAATTCTAC+GGG | + | chr2_1:3637949-3637968 | Msa0188440:CDS | 35.0% |
| GAAGTCAATATCATGGTTTG+GGG | + | chr2_1:3638081-3638100 | Msa0188440:intron | 35.0% | |
| !! | TTCTTTGAAGTTGAAATGCC+AGG | + | chr2_1:3638490-3638509 | Msa0188440:three_prime_UTR | 35.0% |
| ! | ATAGTAAGCAGATTTTTGCC+GGG | - | chr2_1:3638527-3638546 | None:intergenic | 35.0% |
| ! | GTTTAAGACACAGGTTTGGT+TGG | - | chr2_1:3631013-3631032 | None:intergenic | 40.0% |
| AAGAAGAAGAAGGTGAGAGA+GGG | - | chr2_1:3631035-3631054 | None:intergenic | 40.0% | |
| GAATCATCATGATCAGATGG+AGG | - | chr2_1:3631140-3631159 | None:intergenic | 40.0% | |
| TCGGAATCATCATGATCAGA+TGG | - | chr2_1:3631143-3631162 | None:intergenic | 40.0% | |
| GGAAACTTCAACACTGTCAT+CGG | - | chr2_1:3631177-3631196 | None:intergenic | 40.0% | |
| TTCGGAAATGGAATCGTAGT+CGG | - | chr2_1:3631198-3631217 | None:intergenic | 40.0% | |
| TTCCATTTCCGAAGATGAAG+AGG | + | chr2_1:3631205-3631224 | Msa0188440:CDS | 40.0% | |
| TACCTCTTCATCTTCGGAAA+TGG | - | chr2_1:3631210-3631229 | None:intergenic | 40.0% | |
| GGATGATACCTCTTCATCTT+CGG | - | chr2_1:3631216-3631235 | None:intergenic | 40.0% | |
| ! | TCTTCTGTTCTGTTTGTTGC+AGG | + | chr2_1:3631287-3631306 | Msa0188440:intron | 40.0% |
| !! | ATAAGTTTTGTGAGACGGCT+TGG | - | chr2_1:3631761-3631780 | None:intergenic | 40.0% |
| ACTCATGGGCCTGTTTAAAT+TGG | - | chr2_1:3631797-3631816 | None:intergenic | 40.0% | |
| CATAATAGCAGAGGACTGTT+TGG | - | chr2_1:3631909-3631928 | None:intergenic | 40.0% | |
| !! | ATTGTAGGACGTTGATGACT+CGG | + | chr2_1:3631995-3632014 | Msa0188440:intron | 40.0% |
| GGACCTGAATTTGATTACTC+TGG | + | chr2_1:3632150-3632169 | Msa0188440:intron | 40.0% | |
| GAGCCAGAGTAATCAAATTC+AGG | - | chr2_1:3632156-3632175 | None:intergenic | 40.0% | |
| CATCCTCATACCACTTCAAA+GGG | - | chr2_1:3632222-3632241 | None:intergenic | 40.0% | |
| TCATCCTCATACCACTTCAA+AGG | - | chr2_1:3632223-3632242 | None:intergenic | 40.0% | |
| TATGAGGATGAACCCCATAT+TGG | + | chr2_1:3632232-3632251 | Msa0188440:CDS | 40.0% | |
| ATGTTAATATGTGGGGACTG+GGG | - | chr2_1:3632790-3632809 | None:intergenic | 40.0% | |
| CATGTTAATATGTGGGGACT+GGG | - | chr2_1:3632791-3632810 | None:intergenic | 40.0% | |
| CTCACTGACATATATAGGCT+AGG | - | chr2_1:3633050-3633069 | None:intergenic | 40.0% | |
| CTCACCGACATATATAGGTT+AGG | - | chr2_1:3633106-3633125 | None:intergenic | 40.0% | |
| TCTCACTCACCGACATATAT+AGG | - | chr2_1:3633111-3633130 | None:intergenic | 40.0% | |
| CATGAGAGGAGGATCAATAT+AGG | + | chr2_1:3633235-3633254 | Msa0188440:intron | 40.0% | |
| AAATAGCTCGAACACATGAG+AGG | + | chr2_1:3633334-3633353 | Msa0188440:intron | 40.0% | |
| CATGAGAGGAGGTTCAATAT+AGG | + | chr2_1:3633348-3633367 | Msa0188440:intron | 40.0% | |
| CTAACATGGGTCTTCTTTCT+TGG | - | chr2_1:3633432-3633451 | None:intergenic | 40.0% | |
| CAAGAAAGAAGACCCATGTT+AGG | + | chr2_1:3633430-3633449 | Msa0188440:intron | 40.0% | |
| GATCAGGAATCTATGGTTGA+TGG | - | chr2_1:3633685-3633704 | None:intergenic | 40.0% | |
| TTCTTGATCATTTAGGCGGA+AGG | + | chr2_1:3633907-3633926 | Msa0188440:intron | 40.0% | |
| TGAGTACAATGATGAGGAAG+TGG | + | chr2_1:3633937-3633956 | Msa0188440:CDS | 40.0% | |
| GCGCAAACTAATGCAGAATA+AGG | + | chr2_1:3633988-3634007 | Msa0188440:CDS | 40.0% | |
| TGTGGATCAAAGTCAGAATG+TGG | - | chr2_1:3634016-3634035 | None:intergenic | 40.0% | |
| TTCTGACTTTGATCCACATC+CGG | + | chr2_1:3634018-3634037 | Msa0188440:CDS | 40.0% | |
| AAGTAAATACAGACCGGATG+TGG | - | chr2_1:3634034-3634053 | None:intergenic | 40.0% | |
| ATGTGCAGGATTATGTTGAG+TGG | + | chr2_1:3634147-3634166 | Msa0188440:intron | 40.0% | |
| ! | AATGAACCTTCGTTTGGGTT+CGG | - | chr2_1:3634213-3634232 | None:intergenic | 40.0% |
| GAAGGAATGAACCTTCGTTT+GGG | - | chr2_1:3634218-3634237 | None:intergenic | 40.0% | |
| TGAAGGAATGAACCTTCGTT+TGG | - | chr2_1:3634219-3634238 | None:intergenic | 40.0% | |
| GAAGGTTCATTCCTTCAAAG+TGG | + | chr2_1:3634222-3634241 | Msa0188440:CDS | 40.0% | |
| CGATTAGGTACAGATTATCC+AGG | + | chr2_1:3634302-3634321 | Msa0188440:intron | 40.0% | |
| ! | TTTTGACAAGCCAAAGAAGG+AGG | + | chr2_1:3634432-3634451 | Msa0188440:CDS | 40.0% |
| ATACCAGGAAGTTTCTGCTT+TGG | - | chr2_1:3634532-3634551 | None:intergenic | 40.0% | |
| ATCATGGCCTGAGAAGTAAA+AGG | - | chr2_1:3634629-3634648 | None:intergenic | 40.0% | |
| GCCCTAAATTTATCCCACAA+AGG | + | chr2_1:3634728-3634747 | Msa0188440:CDS | 40.0% | |
| ! | TGAAAGCACAGTACCTTTGT+GGG | - | chr2_1:3634744-3634763 | None:intergenic | 40.0% |
| ! | ATGAAAGCACAGTACCTTTG+TGG | - | chr2_1:3634745-3634764 | None:intergenic | 40.0% |
| !! | ACAAAGGTACTGTGCTTTCA+TGG | + | chr2_1:3634744-3634763 | Msa0188440:intron | 40.0% |
| CAATTGCATAAGAGAGACAG+AGG | - | chr2_1:3634782-3634801 | None:intergenic | 40.0% | |
| GCTTCTCATAGATGTAAACC+TGG | - | chr2_1:3634824-3634843 | None:intergenic | 40.0% | |
| !!! | GGAAAGTTTTGAACGCTGTT+TGG | + | chr2_1:3634870-3634889 | Msa0188440:CDS | 40.0% |
| GTGCATGTGTGTTTCATATC+TGG | + | chr2_1:3635024-3635043 | Msa0188440:intron | 40.0% | |
| TTGATGTAACTGCACCTTCA+TGG | - | chr2_1:3635180-3635199 | None:intergenic | 40.0% | |
| TGGTTTCGATTAAACAGTGG+AGG | + | chr2_1:3635263-3635282 | Msa0188440:intron | 40.0% | |
| TTCGATTAAACAGTGGAGGT+CGG | + | chr2_1:3635267-3635286 | Msa0188440:intron | 40.0% | |
| ! | AAGCTGTGAACTGTGTTACT+TGG | + | chr2_1:3635390-3635409 | Msa0188440:CDS | 40.0% |
| AGTACATCTTGTCCCCTAAA+TGG | - | chr2_1:3635570-3635589 | None:intergenic | 40.0% | |
| ! | ACTTCTGTTAAACACTGGCT+TGG | + | chr2_1:3635587-3635606 | Msa0188440:CDS | 40.0% |
| !! | CTTCTGTTAAACACTGGCTT+GGG | + | chr2_1:3635588-3635607 | Msa0188440:CDS | 40.0% |
| GTGATGAAGAAGAACAGCAA+AGG | + | chr2_1:3635610-3635629 | Msa0188440:CDS | 40.0% | |
| CTGCATGAATACATCCACTA+AGG | - | chr2_1:3635996-3636015 | None:intergenic | 40.0% | |
| ! | CATGCAGAATGTTACTTCTG+TGG | + | chr2_1:3636009-3636028 | Msa0188440:intron | 40.0% |
| CAACAATAAAGGATATCCGC+TGG | - | chr2_1:3636073-3636092 | None:intergenic | 40.0% | |
| GCAAGTCCATGTAACTTGAA+AGG | - | chr2_1:3636596-3636615 | None:intergenic | 40.0% | |
| TCTATACACACATTCCATGC+AGG | + | chr2_1:3636849-3636868 | Msa0188440:intron | 40.0% | |
| TTAATTGTGGGGAGCAAAGA+AGG | + | chr2_1:3636879-3636898 | Msa0188440:CDS | 40.0% | |
| ! | GCAAAGAAGGAAAGCTTTGT+TGG | + | chr2_1:3636892-3636911 | Msa0188440:CDS | 40.0% |
| TTATCGCCATTGCAGAGTTT+AGG | + | chr2_1:3637267-3637286 | Msa0188440:intron | 40.0% | |
| TATCGCCATTGCAGAGTTTA+GGG | + | chr2_1:3637268-3637287 | Msa0188440:intron | 40.0% | |
| AGTCAAACTTAACGCTTGCT+AGG | - | chr2_1:3637487-3637506 | None:intergenic | 40.0% | |
| ACAGCCCATTATTTAGGTAC+TGG | - | chr2_1:3637701-3637720 | None:intergenic | 40.0% | |
| ! | GTTCCTTTGGAAATTCTACG+GGG | + | chr2_1:3637950-3637969 | Msa0188440:CDS | 40.0% |
| CTCTCCCATTTGAATTTGCA+TGG | - | chr2_1:3637976-3637995 | None:intergenic | 40.0% | |
| CATGCAAATTCAAATGGGAG+AGG | + | chr2_1:3637974-3637993 | Msa0188440:CDS | 40.0% | |
| AACCCTGGTTATTTACAGCT+GGG | + | chr2_1:3638232-3638251 | Msa0188440:CDS | 40.0% | |
| CCACTGTTATCCCAAGTTTA+GGG | + | chr2_1:3638395-3638414 | Msa0188440:three_prime_UTR | 40.0% | |
| CACTGTTATCCCAAGTTTAG+GGG | + | chr2_1:3638396-3638415 | Msa0188440:three_prime_UTR | 40.0% | |
| ! | TCCGATGGATGTTTTCTTTC+TGG | + | chr2_1:3638609-3638628 | Msa0188440:three_prime_UTR | 40.0% |
| CCCAGAAAGAAAACATCCAT+CGG | - | chr2_1:3638613-3638632 | None:intergenic | 40.0% | |
| ! | CCGATGGATGTTTTCTTTCT+GGG | + | chr2_1:3638610-3638629 | Msa0188440:three_prime_UTR | 40.0% |
| ! | GAGGGTTTAAGACACAGGTT+TGG | - | chr2_1:3631017-3631036 | None:intergenic | 45.0% |
| ! | TGAGAGAGGGTTTAAGACAC+AGG | - | chr2_1:3631022-3631041 | None:intergenic | 45.0% |
| GAAGAAGAAGAAGGTGAGAG+AGG | - | chr2_1:3631036-3631055 | None:intergenic | 45.0% | |
| AGCCGAGATGAAGAAGAAAG+AGG | + | chr2_1:3631103-3631122 | Msa0188440:CDS | 45.0% | |
| TCATCATGATCAGATGGAGG+CGG | - | chr2_1:3631137-3631156 | None:intergenic | 45.0% | |
| TTGGGAGTCAGAATTGTCGT+CGG | - | chr2_1:3631439-3631458 | None:intergenic | 45.0% | |
| GTCCAAACAGGCCGTAAATA+GGG | - | chr2_1:3631539-3631558 | None:intergenic | 45.0% | |
| TGTCCAAACAGGCCGTAAAT+AGG | - | chr2_1:3631540-3631559 | None:intergenic | 45.0% | |
| TGAAAGCTCCGATCTTCATC+AGG | + | chr2_1:3632028-3632047 | Msa0188440:CDS | 45.0% | |
| TCCTCCTTCCTGATGAAGAT+CGG | - | chr2_1:3632039-3632058 | None:intergenic | 45.0% | |
| TGCTGAGAGTGATTCATCTG+AGG | + | chr2_1:3632061-3632080 | Msa0188440:CDS | 45.0% | |
| GAGTGATTCATCTGAGGATG+AGG | + | chr2_1:3632067-3632086 | Msa0188440:CDS | 45.0% | |
| !!! | TCTGGCTCTCCTTTTTCCAT+AGG | + | chr2_1:3632168-3632187 | Msa0188440:intron | 45.0% |
| TCCTCGAAATACCATTGGAG+AGG | + | chr2_1:3632195-3632214 | Msa0188440:CDS | 45.0% | |
| ACCTCTCCAATGGTATTTCG+AGG | - | chr2_1:3632199-3632218 | None:intergenic | 45.0% | |
| CTCACTGACACATATAGGCT+AGG | + | chr2_1:3632413-3632432 | Msa0188440:intron | 45.0% | |
| CCATGTTAATATGTGGGGAC+TGG | - | chr2_1:3632792-3632811 | None:intergenic | 45.0% | |
| CCAGTCCCCACATATTAACA+TGG | + | chr2_1:3632789-3632808 | Msa0188440:intron | 45.0% | |
| GCAGTACTTGTAGGTCAGTT+AGG | + | chr2_1:3632984-3633003 | Msa0188440:intron | 45.0% | |
| TAGCTCAAACACATGAGAGG+AGG | + | chr2_1:3633224-3633243 | Msa0188440:intron | 45.0% | |
| TGCGTTAGACAATGGATGCT+TGG | - | chr2_1:3634189-3634208 | None:intergenic | 45.0% | |
| ! | ATGAACCTTCGTTTGGGTTC+GGG | - | chr2_1:3634212-3634231 | None:intergenic | 45.0% |
| CAGGTTGTGCAGTATGTTAG+AGG | + | chr2_1:3634388-3634407 | Msa0188440:intron | 45.0% | |
| CTCTTGTGGGAAGATGATTC+TGG | + | chr2_1:3634466-3634485 | Msa0188440:CDS | 45.0% | |
| ! | CACGTTTTCTTCGAACTCGA+GGG | - | chr2_1:3634909-3634928 | None:intergenic | 45.0% |
| ! | ACACGTTTTCTTCGAACTCG+AGG | - | chr2_1:3634910-3634929 | None:intergenic | 45.0% |
| GGTCGGTATCCTCACTTAAT+TGG | + | chr2_1:3635284-3635303 | Msa0188440:intron | 45.0% | |
| AAACCAGACTTACGCAGAGA+CGG | - | chr2_1:3635444-3635463 | None:intergenic | 45.0% | |
| !! | ATCCAGAAGAAGGCTCTAAG+AGG | + | chr2_1:3635728-3635747 | Msa0188440:intron | 45.0% |
| TCTTTAAGCCAGCGTACACT+AGG | - | chr2_1:3635869-3635888 | None:intergenic | 45.0% | |
| TTACTTCTGTGGAATGGCAC+CGG | + | chr2_1:3636020-3636039 | Msa0188440:CDS | 45.0% | |
| ! | CTTTTCAACAGTGATGCCAG+CGG | + | chr2_1:3636054-3636073 | Msa0188440:intron | 45.0% |
| GTGAGAGTTTCTTGGACAAC+TGG | - | chr2_1:3636565-3636584 | None:intergenic | 45.0% | |
| AGAAGATGGAACGAGATGGA+TGG | - | chr2_1:3636634-3636653 | None:intergenic | 45.0% | |
| ! | TTAATCTGCATAGGGCACTC+TGG | - | chr2_1:3637018-3637037 | None:intergenic | 45.0% |
| ATCGCCATTGCAGAGTTTAG+GGG | + | chr2_1:3637269-3637288 | Msa0188440:intron | 45.0% | |
| TTGTGTGACCTTTCGCTGAA+AGG | - | chr2_1:3637367-3637386 | None:intergenic | 45.0% | |
| TTTAGACTGTACCCATGTCC+CGG | + | chr2_1:3637588-3637607 | Msa0188440:intron | 45.0% | |
| AATAGTGTTTCCCGGGACAT+GGG | - | chr2_1:3637602-3637621 | None:intergenic | 45.0% | |
| AGCATGCTTTGCCTGTAACT+TGG | + | chr2_1:3637666-3637685 | Msa0188440:intron | 45.0% | |
| GGAGAAGTTCACCAAGTTAC+AGG | - | chr2_1:3637680-3637699 | None:intergenic | 45.0% | |
| TCTGAGCACGAAGCAAACAA+GGG | - | chr2_1:3637866-3637885 | None:intergenic | 45.0% | |
| ATCTGAGCACGAAGCAAACA+AGG | - | chr2_1:3637867-3637886 | None:intergenic | 45.0% | |
| GGGGCCATGCAAATTCAAAT+GGG | + | chr2_1:3637969-3637988 | Msa0188440:CDS | 45.0% | |
| TAAATAACCAGGGTTGCCTG+GGG | - | chr2_1:3638227-3638246 | None:intergenic | 45.0% | |
| GTAAATAACCAGGGTTGCCT+GGG | - | chr2_1:3638228-3638247 | None:intergenic | 45.0% | |
| TGTAAATAACCAGGGTTGCC+TGG | - | chr2_1:3638229-3638248 | None:intergenic | 45.0% | |
| CAACCCTGGTTATTTACAGC+TGG | + | chr2_1:3638231-3638250 | Msa0188440:CDS | 45.0% | |
| ACCCTGGTTATTTACAGCTG+GGG | + | chr2_1:3638233-3638252 | Msa0188440:CDS | 45.0% | |
| GCCACTGTTATCCCAAGTTT+AGG | + | chr2_1:3638394-3638413 | Msa0188440:three_prime_UTR | 45.0% | |
| CCCTAAACTTGGGATAACAG+TGG | - | chr2_1:3638398-3638417 | None:intergenic | 45.0% | |
| TTATCCCAAGTTTAGGGGTG+AGG | + | chr2_1:3638401-3638420 | Msa0188440:three_prime_UTR | 45.0% | |
| TATCCCAAGTTTAGGGGTGA+GGG | + | chr2_1:3638402-3638421 | Msa0188440:three_prime_UTR | 45.0% | |
| ATTCCCTCACCCCTAAACTT+GGG | - | chr2_1:3638408-3638427 | None:intergenic | 45.0% | |
| AATTCCCTCACCCCTAAACT+TGG | - | chr2_1:3638409-3638428 | None:intergenic | 45.0% | |
| !! | TGCCAGGAATTTGTTGTACC+CGG | + | chr2_1:3638506-3638525 | Msa0188440:three_prime_UTR | 45.0% |
| ! | TCTTTCTGGGAAATGTGACG+TGG | + | chr2_1:3638623-3638642 | Msa0188440:three_prime_UTR | 45.0% |
| !! | AATGTGACGTGGAGTTGGTA+TGG | + | chr2_1:3638634-3638653 | Msa0188440:three_prime_UTR | 45.0% |
| CAATTCTGACTCCCAAGACG+AGG | + | chr2_1:3631443-3631462 | Msa0188440:intron | 50.0% | |
| CACCCTATTTACGGCCTGTT+TGG | + | chr2_1:3631534-3631553 | Msa0188440:intron | 50.0% | |
| !! | TAGGACGTTGATGACTCGGA+AGG | + | chr2_1:3631999-3632018 | Msa0188440:intron | 50.0% |
| AGCTCCGATCTTCATCAGGA+AGG | + | chr2_1:3632032-3632051 | Msa0188440:CDS | 50.0% | |
| TCCGATCTTCATCAGGAAGG+AGG | + | chr2_1:3632035-3632054 | Msa0188440:CDS | 50.0% | |
| GATCTTCATCAGGAAGGAGG+AGG | + | chr2_1:3632038-3632057 | Msa0188440:CDS | 50.0% | |
| ! | GGCTCTCCTTTTTCCATAGG+TGG | + | chr2_1:3632171-3632190 | Msa0188440:intron | 50.0% |
| GAGGAGCCACCTATGGAAAA+AGG | - | chr2_1:3632180-3632199 | None:intergenic | 50.0% | |
| GTATTTCGAGGAGCCACCTA+TGG | - | chr2_1:3632187-3632206 | None:intergenic | 50.0% | |
| GTGGCTCCTCGAAATACCAT+TGG | + | chr2_1:3632190-3632209 | Msa0188440:CDS | 50.0% | |
| CTTCAAAGGGACCTCTCCAA+TGG | - | chr2_1:3632209-3632228 | None:intergenic | 50.0% | |
| ! | TTGGAGAGGTCCCTTTGAAG+TGG | + | chr2_1:3632209-3632228 | Msa0188440:CDS | 50.0% |
| !! | GGTCCCTTTGAAGTGGTATG+AGG | + | chr2_1:3632216-3632235 | Msa0188440:CDS | 50.0% |
| AAACGGGCAGAACAAAGCAC+AGG | - | chr2_1:3632734-3632753 | None:intergenic | 50.0% | |
| TAGCTCGAACACATGAGAGG+AGG | + | chr2_1:3633337-3633356 | Msa0188440:intron | 50.0% | |
| ! | GGAAGTTTCTGCTTTGGTGC+AGG | - | chr2_1:3634526-3634545 | None:intergenic | 50.0% |
| GCACCAAAGCAGAAACTTCC+TGG | + | chr2_1:3634526-3634545 | Msa0188440:CDS | 50.0% | |
| CTATTGAAGCTTCAGGGCAG+TGG | + | chr2_1:3635203-3635222 | Msa0188440:CDS | 50.0% | |
| TGATGGAACTGTCCGTGTCT+GGG | + | chr2_1:3635325-3635344 | Msa0188440:CDS | 50.0% | |
| CAGTTTCAACCTCCCAGACA+CGG | - | chr2_1:3635340-3635359 | None:intergenic | 50.0% | |
| ! | TGGCAGATGTCTGAGACAGT+GGG | + | chr2_1:3635358-3635377 | Msa0188440:CDS | 50.0% |
| ! | TGTCTGAGACAGTGGGAGAT+TGG | + | chr2_1:3635365-3635384 | Msa0188440:CDS | 50.0% |
| CCAGTCTCATCTGATGCTTC+TGG | - | chr2_1:3635663-3635682 | None:intergenic | 50.0% | |
| !! | CCAGAAGCATCAGATGAGAC+TGG | + | chr2_1:3635660-3635679 | Msa0188440:CDS | 50.0% |
| GACCTCTTAGAGCCTTCTTC+TGG | - | chr2_1:3635733-3635752 | None:intergenic | 50.0% | |
| CTGCAAACACAAGCGTGGTT+AGG | - | chr2_1:3635835-3635854 | None:intergenic | 50.0% | |
| CTAACCACGCTTGTGTTTGC+AGG | + | chr2_1:3635833-3635852 | Msa0188440:intron | 50.0% | |
| !! | AGAAAGCACCTAGTGTACGC+TGG | + | chr2_1:3635858-3635877 | Msa0188440:CDS | 50.0% |
| AAATGAGGGGGATCGCATGA+CGG | - | chr2_1:3636326-3636345 | None:intergenic | 50.0% | |
| GATGGAACGAGATGGATGGA+AGG | - | chr2_1:3636630-3636649 | None:intergenic | 50.0% | |
| !! | TGACGAGGCTTCTTTGAGAC+CGG | - | chr2_1:3636726-3636745 | None:intergenic | 50.0% |
| !! | AGGATGGACTGCAATTGACG+AGG | - | chr2_1:3636741-3636760 | None:intergenic | 50.0% |
| TCGTCAATTGCAGTCCATCC+TGG | + | chr2_1:3636740-3636759 | Msa0188440:CDS | 50.0% | |
| TCAATTGCAGTCCATCCTGG+AGG | + | chr2_1:3636743-3636762 | Msa0188440:CDS | 50.0% | |
| CCATTGCAGAGTTTAGGGGA+GGG | + | chr2_1:3637273-3637292 | Msa0188440:intron | 50.0% | |
| ACGTGTGACCTTTCAGCGAA+AGG | + | chr2_1:3637356-3637375 | Msa0188440:intron | 50.0% | |
| TTAGACTGTACCCATGTCCC+GGG | + | chr2_1:3637589-3637608 | Msa0188440:intron | 50.0% | |
| GAATAGTGTTTCCCGGGACA+TGG | - | chr2_1:3637603-3637622 | None:intergenic | 50.0% | |
| ACAGGCAAAGCATGCTCACT+TGG | - | chr2_1:3637662-3637681 | None:intergenic | 50.0% | |
| TGGCCCCGTAGAATTTCCAA+AGG | - | chr2_1:3637956-3637975 | None:intergenic | 50.0% | |
| CGGGGCCATGCAAATTCAAA+TGG | + | chr2_1:3637968-3637987 | Msa0188440:CDS | 50.0% | |
| GCCCCAGCTGTAAATAACCA+GGG | - | chr2_1:3638237-3638256 | None:intergenic | 50.0% | |
| AGCCCCAGCTGTAAATAACC+AGG | - | chr2_1:3638238-3638257 | None:intergenic | 50.0% | |
| TGCCGGGTACAACAAATTCC+TGG | - | chr2_1:3638511-3638530 | None:intergenic | 50.0% | |
| TGGGAAATGTGACGTGGAGT+TGG | + | chr2_1:3638629-3638648 | Msa0188440:three_prime_UTR | 50.0% | |
| TCATGATCAGATGGAGGCGG+CGG | - | chr2_1:3631134-3631153 | None:intergenic | 55.0% | |
| GTCATCGGAGTCGTCGTCAT+CGG | - | chr2_1:3631162-3631181 | None:intergenic | 55.0% | |
| TTCTGACTCCCAAGACGAGG+AGG | + | chr2_1:3631446-3631465 | Msa0188440:intron | 55.0% | |
| GAAGCTGACCTCCTCGTCTT+GGG | - | chr2_1:3631457-3631476 | None:intergenic | 55.0% | |
| TGAAGCTGACCTCCTCGTCT+TGG | - | chr2_1:3631458-3631477 | None:intergenic | 55.0% | |
| !! | GACGTTGATGACTCGGAAGG+TGG | + | chr2_1:3632002-3632021 | Msa0188440:CDS | 55.0% |
| GGTTCGGGTGCGTTAGACAA+TGG | - | chr2_1:3634197-3634216 | None:intergenic | 55.0% | |
| TGAAGCTTCAGGGCAGTGGA+TGG | + | chr2_1:3635207-3635226 | Msa0188440:CDS | 55.0% | |
| ! | GTGATGGAACTGTCCGTGTC+TGG | + | chr2_1:3635324-3635343 | Msa0188440:CDS | 55.0% |
| CGTGTCTGGGAGGTTGAAAC+TGG | + | chr2_1:3635338-3635357 | Msa0188440:CDS | 55.0% | |
| ! | CTGGCAGATGTCTGAGACAG+TGG | + | chr2_1:3635357-3635376 | Msa0188440:CDS | 55.0% |
| CTTGCCTGCAAACACAAGCG+TGG | - | chr2_1:3635840-3635859 | None:intergenic | 55.0% | |
| ! | TCTGTGGAATGGCACCGGAA+AGG | + | chr2_1:3636025-3636044 | Msa0188440:CDS | 55.0% |
| GCCATTGCAGAGTTTAGGGG+AGG | + | chr2_1:3637272-3637291 | Msa0188440:intron | 55.0% | |
| CCCTCCCCTAAACTCTGCAA+TGG | - | chr2_1:3637276-3637295 | None:intergenic | 55.0% | |
| TGGACTGCAAGTTTCACCCC+AGG | + | chr2_1:3638208-3638227 | Msa0188440:CDS | 55.0% | |
| ACGCACCCGAACCCAAACGA+AGG | + | chr2_1:3634204-3634223 | Msa0188440:CDS | 60.0% | |
| TCAGGGCAGTGGATGGCTTC+AGG | + | chr2_1:3635214-3635233 | Msa0188440:CDS | 60.0% | |
| TGGAACTGTCCGTGTCTGGG+AGG | + | chr2_1:3635328-3635347 | Msa0188440:CDS | 60.0% | |
| TGGCCGTCTCTGCGTAAGTC+TGG | + | chr2_1:3635438-3635457 | Msa0188440:intron | 60.0% | |
| AGTTTCACCCCAGGCAACCC+TGG | + | chr2_1:3638217-3638236 | Msa0188440:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 3630928 | 3638730 | 3630928 | ID=Msa0188440;Name=Msa0188440 |
| chr2_1 | mRNA | 3630928 | 3638730 | 3630928 | ID=Msa0188440-mRNA-1;Parent=Msa0188440;Name=Msa0188440-mRNA-1;_AED=0.13;_eAED=0.13;_QI=152|0.87|0.88|1|1|1|17|440|678 |
| chr2_1 | exon | 3630928 | 3631226 | 3630928 | ID=Msa0188440-mRNA-1:exon:1510;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3632002 | 3632088 | 3632002 | ID=Msa0188440-mRNA-1:exon:1511;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3632190 | 3632344 | 3632190 | ID=Msa0188440-mRNA-1:exon:1512;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3633922 | 3634039 | 3633922 | ID=Msa0188440-mRNA-1:exon:1513;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3634155 | 3634256 | 3634155 | ID=Msa0188440-mRNA-1:exon:1514;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3634391 | 3634547 | 3634391 | ID=Msa0188440-mRNA-1:exon:1515;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3634641 | 3634749 | 3634641 | ID=Msa0188440-mRNA-1:exon:1516;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3634825 | 3634927 | 3634825 | ID=Msa0188440-mRNA-1:exon:1517;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3635085 | 3635235 | 3635085 | ID=Msa0188440-mRNA-1:exon:1518;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3635318 | 3635450 | 3635318 | ID=Msa0188440-mRNA-1:exon:1519;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3635575 | 3635681 | 3635575 | ID=Msa0188440-mRNA-1:exon:1520;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3635855 | 3635925 | 3635855 | ID=Msa0188440-mRNA-1:exon:1521;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3636016 | 3636046 | 3636016 | ID=Msa0188440-mRNA-1:exon:1522;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3636552 | 3636764 | 3636552 | ID=Msa0188440-mRNA-1:exon:1523;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3636871 | 3636955 | 3636871 | ID=Msa0188440-mRNA-1:exon:1524;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3637817 | 3637995 | 3637817 | ID=Msa0188440-mRNA-1:exon:1525;Parent=Msa0188440-mRNA-1 |
| chr2_1 | exon | 3638202 | 3638730 | 3638202 | ID=Msa0188440-mRNA-1:exon:1526;Parent=Msa0188440-mRNA-1 |
| chr2_1 | five_prime_UTR | 3630928 | 3631079 | 3630928 | ID=Msa0188440-mRNA-1:five_prime_utr;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3631080 | 3631226 | 3631080 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3632002 | 3632088 | 3632002 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3632190 | 3632344 | 3632190 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3633922 | 3634039 | 3633922 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3634155 | 3634256 | 3634155 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3634391 | 3634547 | 3634391 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3634641 | 3634749 | 3634641 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3634825 | 3634927 | 3634825 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3635085 | 3635235 | 3635085 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3635318 | 3635450 | 3635318 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3635575 | 3635681 | 3635575 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3635855 | 3635925 | 3635855 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3636016 | 3636046 | 3636016 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3636552 | 3636764 | 3636552 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3636871 | 3636955 | 3636871 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3637817 | 3637995 | 3637817 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | CDS | 3638202 | 3638290 | 3638202 | ID=Msa0188440-mRNA-1:cds;Parent=Msa0188440-mRNA-1 |
| chr2_1 | three_prime_UTR | 3638291 | 3638730 | 3638291 | ID=Msa0188440-mRNA-1:three_prime_utr;Parent=Msa0188440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
