Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231030 | XP_003592947.3 | 94.028 | 720 | 15 | 5 | 1 | 696 | 1 | 716 | 0.0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231030 | sp|F4IH25|BOP1_ARATH | 64.984 | 634 | 196 | 5 | 83 | 695 | 98 | 726 | 0.0 | 851 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231030 | G7INL9 | 85.452 | 763 | 40 | 7 | 1 | 696 | 1 | 759 | 0.0 | 1277 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044890 | Msa0231030 | 0.813370 | 2.649639e-51 | -8.615850e-47 |
| Msa0068970 | Msa0231030 | 0.806293 | 8.826624e-50 | -8.615850e-47 |
| Msa0128990 | Msa0231030 | 0.823614 | 1.259767e-53 | -8.615850e-47 |
| Msa0164770 | Msa0231030 | 0.861244 | 1.175442e-63 | -8.615850e-47 |
| Msa0174830 | Msa0231030 | 0.852219 | 5.330513e-61 | -8.615850e-47 |
| Msa0188440 | Msa0231030 | 0.909771 | 3.937485e-82 | -8.615850e-47 |
| Msa0231030 | Msa0270550 | 0.945700 | 1.868328e-104 | -8.615850e-47 |
| Msa0231030 | Msa0309000 | 0.889593 | 2.107207e-73 | -8.615850e-47 |
| Msa0231030 | Msa0482200 | 0.834263 | 3.316101e-56 | -8.615850e-47 |
| Msa0231030 | Msa0485510 | 0.826333 | 2.872833e-54 | -8.615850e-47 |
| Msa0231030 | Msa0486070 | 0.813790 | 2.141131e-51 | -8.615850e-47 |
| Msa0231030 | Msa0580470 | 0.811064 | 8.440778e-51 | -8.615850e-47 |
| Msa0231030 | Msa0659050 | 0.817758 | 2.793138e-52 | -8.615850e-47 |
| Msa0231030 | Msa0660850 | 0.810765 | 9.793953e-51 | -8.615850e-47 |
| Msa0231030 | Msa0687440 | 0.816545 | 5.233222e-52 | -8.615850e-47 |
| Msa0231030 | Msa0704980 | 0.836059 | 1.168374e-56 | -8.615850e-47 |
| Msa0231030 | Msa0709730 | 0.836511 | 8.963844e-57 | -8.615850e-47 |
| Msa0231030 | Msa0745740 | 0.806409 | 8.343973e-50 | -8.615850e-47 |
| Msa0231030 | Msa0757940 | 0.816320 | 5.878020e-52 | -8.615850e-47 |
| Msa0231030 | Msa0799260 | 0.812425 | 4.266688e-51 | -8.615850e-47 |
| Msa0231030 | Msa0799310 | 0.818100 | 2.337257e-52 | -8.615850e-47 |
| Msa0231030 | Msa0826990 | 0.818606 | 1.795094e-52 | -8.615850e-47 |
| Msa0231030 | Msa0856530 | 0.832455 | 9.360725e-56 | -8.615850e-47 |
| Msa0231030 | Msa1027640 | 0.852180 | 5.468271e-61 | -8.615850e-47 |
| Msa0231030 | Msa1066190 | 0.843144 | 1.678288e-58 | -8.615850e-47 |
| Msa0231030 | Msa1155180 | 0.809714 | 1.650929e-50 | -8.615850e-47 |
| Msa0231030 | Msa1209850 | 0.814983 | 1.166494e-51 | -8.615850e-47 |
| Msa0231030 | Msa1211820 | 0.817007 | 4.121835e-52 | -8.615850e-47 |
| Msa0231030 | Msa1218110 | 0.844290 | 8.287411e-59 | -8.615850e-47 |
| Msa0231030 | Msa1225720 | 0.834106 | 3.631533e-56 | -8.615850e-47 |
| Msa0231030 | Msa1258390 | 0.836739 | 7.842608e-57 | -8.615850e-47 |
| Msa0231030 | Msa1341130 | 0.810982 | 8.790463e-51 | -8.615850e-47 |
| Msa0231030 | Msa1356400 | 0.801537 | 8.591806e-49 | -8.615850e-47 |
| Msa0231030 | Msa1370800 | 0.824189 | 9.237652e-54 | -8.615850e-47 |
| Msa0231030 | Msa1418690 | 0.809985 | 1.443088e-50 | -8.615850e-47 |
| Msa0231030 | Msa1444240 | 0.828185 | 1.034687e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231030 | MtrunA17_Chr2g0277311 | 94.872 | 546 | 15 | 4 | 1 | 537 | 1 | 542 | 0.0 | 1033 |
| Msa0231030 | MtrunA17_Chr2g0277301 | 100.000 | 71 | 0 | 0 | 626 | 696 | 1 | 71 | 7.24e-46 | 158 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231030 | AT2G40360.1 | 64.984 | 634 | 196 | 5 | 83 | 695 | 98 | 726 | 0.0 | 851 |
| Msa0231030 | AT2G40360.2 | 64.678 | 637 | 198 | 6 | 81 | 695 | 78 | 709 | 0.0 | 849 |
Find 228 sgRNAs with CRISPR-Local
Find 507 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTTTGTGGGATAAATTT+AGG | 0.098465 | 2_2:+3235780 | None:intergenic |
| TAACAATTGGGGAACAAAAT+TGG | 0.139168 | 2_2:+3232083 | None:intergenic |
| AACTCCCTCACCCCTAAATT+TGG | 0.153628 | 2_2:+3232034 | None:intergenic |
| GCCACTGTTATCCCAAATTT+AGG | 0.169146 | 2_2:-3232046 | Msa0231030:three_prime_UTR |
| GAAAGAAAGGGAAGACAAAT+TGG | 0.200648 | 2_2:-3238223 | Msa0231030:CDS |
| CCTTGATGTCATATCCAATA+TGG | 0.214290 | 2_2:+3238262 | None:intergenic |
| ACAACGTTGTTAATATCTTT+TGG | 0.224398 | 2_2:+3232616 | None:intergenic |
| AGCTTTGGCTTTAAAGATTC+AGG | 0.238489 | 2_2:+3235413 | None:intergenic |
| TATAAGGTTAAGGCATTTAA+AGG | 0.244291 | 2_2:-3234606 | Msa0231030:intron |
| TCAATTTCTATTGAAGCTTC+AGG | 0.254166 | 2_2:-3235314 | Msa0231030:CDS |
| AAAGCTTTGTTGGTTTGATA+TGG | 0.264615 | 2_2:-3233608 | Msa0231030:CDS |
| TAAGAATCATCCTCCTTCTT+TGG | 0.272852 | 2_2:+3236068 | None:intergenic |
| ACTTACTTAAGAACTTTATA+TGG | 0.279811 | 2_2:+3233571 | None:intergenic |
| TTGGGCTCGTCTCGCTTATC+AGG | 0.283477 | 2_2:+3239649 | None:intergenic |
| GCCAAAGCTTCCAAATAAAA+AGG | 0.283788 | 2_2:-3235399 | Msa0231030:CDS |
| ACCTTTGTGGGATAAATTTA+GGG | 0.287084 | 2_2:+3235781 | None:intergenic |
| AAATCCTCTTATTGTTCCTT+TGG | 0.289726 | 2_2:-3232503 | Msa0231030:CDS |
| TTCAAAGTGGGAAGCTAAAA+AGG | 0.292304 | 2_2:-3236275 | Msa0231030:intron |
| AGAAGTCAATATCATGGTTT+GGG | 0.292442 | 2_2:-3232360 | Msa0231030:CDS |
| CTCTTGTGGGAAGATGATTC+TGG | 0.293595 | 2_2:-3236044 | Msa0231030:CDS |
| GATATGAATTAATCTCTTCT+TGG | 0.293648 | 2_2:+3235826 | None:intergenic |
| CAGCTTTCTGTTTAACAATT+GGG | 0.295383 | 2_2:+3232071 | None:intergenic |
| TTGAAAAGTAGTCACCTTTC+CGG | 0.298992 | 2_2:+3234471 | None:intergenic |
| TCATTCATTCATTCATTCAT+TGG | 0.308634 | 2_2:+3239630 | None:intergenic |
| ATGAACCTTCGTTTGGGTTC+GGG | 0.309674 | 2_2:+3236301 | None:intergenic |
| TATTTGCATTGCAGGAATAT+TGG | 0.313865 | 2_2:-3232252 | Msa0231030:intron |
| AAAATTGGGAATAGAGTTAC+AGG | 0.314181 | 2_2:+3232098 | None:intergenic |
| CCAGTCTCATCTGATGCTTC+TGG | 0.319072 | 2_2:+3234850 | None:intergenic |
| ATGATAAACACGATGGTATA+AGG | 0.329604 | 2_2:-3234622 | Msa0231030:CDS |
| TCAGCTTTCTGTTTAACAAT+TGG | 0.333490 | 2_2:+3232070 | None:intergenic |
| TATTCGATATAGCATGTTAT+GGG | 0.338942 | 2_2:+3235362 | None:intergenic |
| TAGAAGTCAATATCATGGTT+TGG | 0.347476 | 2_2:-3232361 | Msa0231030:CDS |
| AACAATTGGGGAACAAAATT+GGG | 0.349363 | 2_2:+3232084 | None:intergenic |
| AGAAGAACAGCAAAGGATTA+AGG | 0.351258 | 2_2:-3234893 | Msa0231030:CDS |
| TGAAGGAATGAACCTTCGTT+TGG | 0.352971 | 2_2:+3236294 | None:intergenic |
| ATATTCGATATAGCATGTTA+TGG | 0.356240 | 2_2:+3235361 | None:intergenic |
| AAAAGATAAAGAAGAAAGAA+AGG | 0.359734 | 2_2:-3238236 | Msa0231030:CDS |
| TCAGGGCAGTGGATGGCTTC+AGG | 0.362455 | 2_2:-3235296 | Msa0231030:intron |
| TTTCCCATTAACAAAACTAT+AGG | 0.362557 | 2_2:+3232007 | None:intergenic |
| TGTAAATAACCAGGGTTGCC+TGG | 0.363124 | 2_2:+3232214 | None:intergenic |
| AATGAACCTTCGTTTGGGTT+CGG | 0.364933 | 2_2:+3236300 | None:intergenic |
| CCACTGTTATCCCAAATTTA+GGG | 0.371496 | 2_2:-3232045 | Msa0231030:three_prime_UTR |
| ACATGCTATATCGAATATAA+AGG | 0.374460 | 2_2:-3235356 | Msa0231030:CDS |
| GCACCAAAGCAGAAACTTCC+TGG | 0.381658 | 2_2:-3235984 | Msa0231030:intron |
| CATTCATTCATTCATTCATT+GGG | 0.382928 | 2_2:+3239631 | None:intergenic |
| TTGATGTAACTGCACCTTCA+TGG | 0.388375 | 2_2:+3235333 | None:intergenic |
| CGGGGCCATGCAAATTCAAA+TGG | 0.388895 | 2_2:-3232472 | Msa0231030:CDS |
| GAATTAATCTCTTCTTGGGT+TGG | 0.389942 | 2_2:+3235831 | None:intergenic |
| GCGCAAACTAATGCAGAATA+AGG | 0.393235 | 2_2:-3236522 | Msa0231030:CDS |
| TACCTCTTCATCTTCGGAAA+TGG | 0.393338 | 2_2:+3239364 | None:intergenic |
| TGCCGGGTACAACAAATTCC+TGG | 0.394882 | 2_2:+3231932 | None:intergenic |
| ATATGAATTAATCTCTTCTT+GGG | 0.401613 | 2_2:+3235827 | None:intergenic |
| ATCATCAACATTTGCAAGAA+AGG | 0.402378 | 2_2:+3238197 | None:intergenic |
| TTGTTCCTTTGGAAATTCTA+CGG | 0.403370 | 2_2:-3232492 | Msa0231030:CDS |
| CAACCCTGGTTATTTACAGC+TGG | 0.404320 | 2_2:-3232209 | Msa0231030:CDS |
| GTGATGGAACTGTCCGTGTC+TGG | 0.404605 | 2_2:-3235186 | Msa0231030:CDS |
| CTCTCCCATTTGAATTTGCA+TGG | 0.409359 | 2_2:+3232467 | None:intergenic |
| GACAAAAGATGAAATCAAAA+TGG | 0.410244 | 2_2:-3236546 | Msa0231030:CDS |
| ATTTCCAAAGGAACAATAAG+AGG | 0.410944 | 2_2:+3232499 | None:intergenic |
| CTTGATGTCATATCCAATAT+GGG | 0.413782 | 2_2:+3238263 | None:intergenic |
| TTCATAGCATTGTCATATGC+AGG | 0.415150 | 2_2:+3235663 | None:intergenic |
| ATACCAGGAAGTTTCTGCTT+TGG | 0.424563 | 2_2:+3235981 | None:intergenic |
| ACTCCCTCACCCCTAAATTT+GGG | 0.428225 | 2_2:+3232035 | None:intergenic |
| ATGTTGATGATTCTAAGAAT+TGG | 0.428284 | 2_2:-3238185 | Msa0231030:intron |
| GAAGGAATGAACCTTCGTTT+GGG | 0.436375 | 2_2:+3236295 | None:intergenic |
| GTGAGAGTTTCTTGGACAAC+TGG | 0.437387 | 2_2:+3233948 | None:intergenic |
| TTCCTCTTTCTTCTTCATCT+CGG | 0.439715 | 2_2:+3239466 | None:intergenic |
| ATATAGCATGTTATGGGGTA+AGG | 0.441338 | 2_2:+3235368 | None:intergenic |
| GAAGCTGACCTCCTCGTCTT+GGG | 0.442155 | 2_2:+3239135 | None:intergenic |
| TTAATTGTGGGGAGCAAAGA+AGG | 0.442713 | 2_2:-3233631 | Msa0231030:CDS |
| GCAAAGAAGGAAAGCTTTGT+TGG | 0.443901 | 2_2:-3233618 | Msa0231030:CDS |
| TGTTCCTTTGGAAATTCTAC+GGG | 0.444924 | 2_2:-3232491 | Msa0231030:CDS |
| TATGAGGATGAACCCCATAT+TGG | 0.445423 | 2_2:-3238276 | Msa0231030:CDS |
| GTAAATAACCAGGGTTGCCT+GGG | 0.445737 | 2_2:+3232215 | None:intergenic |
| CGTGTCTGGGAGGTTGAAAC+TGG | 0.447803 | 2_2:-3235172 | Msa0231030:CDS |
| CTGGCAGATGTCTGAGACAG+TGG | 0.448817 | 2_2:-3235153 | Msa0231030:CDS |
| AACACGATGGTATAAGGTTA+AGG | 0.454384 | 2_2:-3234616 | Msa0231030:CDS |
| CTTTGTACAAATAAAGAAGA+TGG | 0.456986 | 2_2:+3233865 | None:intergenic |
| ATTATGTTGAGTGGTTCAAA+TGG | 0.460094 | 2_2:-3236354 | Msa0231030:CDS |
| TTCTGACTTTGATCCACATC+CGG | 0.460539 | 2_2:-3236492 | Msa0231030:intron |
| AAACTTCCTTTCAAGTTACA+TGG | 0.460764 | 2_2:-3233923 | Msa0231030:CDS |
| AATGAATGAATGAATGAGTA+AGG | 0.465966 | 2_2:-3239624 | Msa0231030:five_prime_UTR |
| AAAGATAAAGAAGAAAGAAA+GGG | 0.466560 | 2_2:-3238235 | Msa0231030:CDS |
| GGATGATTCTTATCTCTTGT+GGG | 0.469629 | 2_2:-3236057 | Msa0231030:CDS |
| TGAAAGCTCCGATCTTCATC+AGG | 0.471911 | 2_2:-3238480 | Msa0231030:CDS |
| GGAAGTTTCTGCTTTGGTGC+AGG | 0.474613 | 2_2:+3235987 | None:intergenic |
| GCAGGTGATAATTTAATTGT+GGG | 0.476821 | 2_2:-3233643 | Msa0231030:intron |
| CTTCTGTTAAACACTGGCTT+GGG | 0.477526 | 2_2:-3234922 | Msa0231030:CDS |
| TGGGTTGGAATATACTCTAA+AGG | 0.478484 | 2_2:+3235846 | None:intergenic |
| TGAAGCTGACCTCCTCGTCT+TGG | 0.479040 | 2_2:+3239134 | None:intergenic |
| CAATTTCTATTGAAGCTTCA+GGG | 0.480377 | 2_2:-3235313 | Msa0231030:CDS |
| AGGATGATTCTTATCTCTTG+TGG | 0.482043 | 2_2:-3236058 | Msa0231030:CDS |
| GTATGGTAATTGATAATGAT+TGG | 0.482433 | 2_2:-3231789 | Msa0231030:three_prime_UTR |
| TTTGTGAAACTAGGTAAGCT+AGG | 0.484671 | 2_2:+3239578 | None:intergenic |
| TCGTCAATTGCAGTCCATCC+TGG | 0.485324 | 2_2:-3233770 | Msa0231030:CDS |
| TGCAGGTGATAATTTAATTG+TGG | 0.485837 | 2_2:-3233644 | Msa0231030:intron |
| CTATTGAAGCTTCAGGGCAG+TGG | 0.486682 | 2_2:-3235307 | Msa0231030:CDS |
| TGCATATGACAATGCTATGA+AGG | 0.488709 | 2_2:-3235661 | Msa0231030:CDS |
| AAGTAAATACAGACCGGATG+TGG | 0.489461 | 2_2:+3236479 | None:intergenic |
| GAAGAAGAAGAAGGTGAGAG+AGG | 0.493057 | 2_2:+3239532 | None:intergenic |
| GGATGATACCTCTTCATCTT+CGG | 0.493753 | 2_2:+3239358 | None:intergenic |
| GAGGGTTTAAGACACAGGTT+TGG | 0.494391 | 2_2:+3239551 | None:intergenic |
| TTCTTGATCATTTAGGCGGA+AGG | 0.494928 | 2_2:-3236603 | Msa0231030:intron |
| AACCCTGGTTATTTACAGCT+GGG | 0.495621 | 2_2:-3232208 | Msa0231030:CDS |
| AAGCTGTGAACTGTGTTACT+TGG | 0.496069 | 2_2:-3235120 | Msa0231030:CDS |
| CAGGTTGTGCAGTATGTTAG+AGG | 0.496768 | 2_2:-3236122 | Msa0231030:CDS |
| GTCATCGGAGTCGTCGTCAT+CGG | 0.502887 | 2_2:+3239412 | None:intergenic |
| AAAGAAAGGGAAGACAAATT+GGG | 0.504818 | 2_2:-3238222 | Msa0231030:CDS |
| ATGAAAGCACAGTACCTTTG+TGG | 0.506407 | 2_2:+3235768 | None:intergenic |
| TGAGAGAGGGTTTAAGACAC+AGG | 0.511770 | 2_2:+3239546 | None:intergenic |
| TTGTACAATGGTGTTATGAA+AGG | 0.514108 | 2_2:+3231759 | None:intergenic |
| TTTGGTTGGTTTGTGAAACT+AGG | 0.514192 | 2_2:+3239569 | None:intergenic |
| TGCGTTAGACAATGGATGCT+TGG | 0.517477 | 2_2:+3236324 | None:intergenic |
| TGAATGAGTAAGGGTGGGTG+CGG | 0.518428 | 2_2:-3239614 | Msa0231030:five_prime_UTR |
| TTATCCCAAATTTAGGGGTG+AGG | 0.519078 | 2_2:-3232039 | Msa0231030:three_prime_UTR |
| ATCTGAGCACGAAGCAAACA+AGG | 0.519889 | 2_2:+3232576 | None:intergenic |
| TCATCCTCATACCACTTCAA+AGG | 0.523812 | 2_2:+3238288 | None:intergenic |
| ACTTCTGTTAAACACTGGCT+TGG | 0.523923 | 2_2:-3234923 | Msa0231030:CDS |
| AAGAAGAAGAAGGTGAGAGA+GGG | 0.524337 | 2_2:+3239533 | None:intergenic |
| AGCCCCAGCTGTAAATAACC+AGG | 0.525330 | 2_2:+3232205 | None:intergenic |
| TTGTGAAACTAGGTAAGCTA+GGG | 0.525334 | 2_2:+3239579 | None:intergenic |
| CCATATTGGATATGACATCA+AGG | 0.525475 | 2_2:-3238262 | Msa0231030:CDS |
| CATCCTCATACCACTTCAAA+GGG | 0.526557 | 2_2:+3238289 | None:intergenic |
| ACCTCTCCAATGGTATTTCG+AGG | 0.527431 | 2_2:+3238312 | None:intergenic |
| AGCTTTCTGTTTAACAATTG+GGG | 0.527891 | 2_2:+3232072 | None:intergenic |
| ATTGTAGGACGTTGATGACT+CGG | 0.530821 | 2_2:-3238513 | Msa0231030:intron |
| CTTTATATGGTTTAGACGAA+AGG | 0.531394 | 2_2:+3233584 | None:intergenic |
| GGTCCCTTTGAAGTGGTATG+AGG | 0.533326 | 2_2:-3238292 | Msa0231030:CDS |
| CCCAGAAAGAAAACATCCAT+CGG | 0.533440 | 2_2:+3231830 | None:intergenic |
| TGACGAGGCTTCTTTGAGAC+CGG | 0.534532 | 2_2:+3233787 | None:intergenic |
| TGAAAGCACAGTACCTTTGT+GGG | 0.534624 | 2_2:+3235769 | None:intergenic |
| GGTTCGGGTGCGTTAGACAA+TGG | 0.536640 | 2_2:+3236316 | None:intergenic |
| GAGGATTATATGACTCATCA+TGG | 0.537199 | 2_2:+3235868 | None:intergenic |
| TGTCTGAGACAGTGGGAGAT+TGG | 0.541054 | 2_2:-3235145 | Msa0231030:CDS |
| ATCGAATATAAAGGCCATGA+AGG | 0.541999 | 2_2:-3235347 | Msa0231030:CDS |
| TCTTTAAGCCAGCGTACACT+AGG | 0.542961 | 2_2:+3234644 | None:intergenic |
| TCCTCCTTCCTGATGAAGAT+CGG | 0.543589 | 2_2:+3238472 | None:intergenic |
| CATGCAGAATGTTACTTCTG+TGG | 0.543641 | 2_2:-3234501 | Msa0231030:intron |
| GAGTGATTCATCTGAGGATG+AGG | 0.544074 | 2_2:-3238441 | Msa0231030:intron |
| AATGTGACGTGGAGTTGGTA+TGG | 0.545186 | 2_2:-3231806 | Msa0231030:three_prime_UTR |
| AGAAGATGGAACGAGATGGA+TGG | 0.545362 | 2_2:+3233879 | None:intergenic |
| ATGATATTGACTTCTAAAAG+AGG | 0.545624 | 2_2:+3232368 | None:intergenic |
| TACCAGGAATTTGTTGTACC+CGG | 0.547337 | 2_2:-3231934 | Msa0231030:three_prime_UTR |
| TTCTTTGAAGTTGAAATACC+AGG | 0.547458 | 2_2:-3231950 | Msa0231030:three_prime_UTR |
| TTCCATTTCCGAAGATGAAG+AGG | 0.549861 | 2_2:-3239366 | Msa0231030:intron |
| AGTTTCACCCCAGGCAACCC+TGG | 0.550056 | 2_2:-3232223 | Msa0231030:CDS |
| GGAAACTTCAACACTGTCAT+CGG | 0.555060 | 2_2:+3239397 | None:intergenic |
| TCTGAATTAGAACATGAAGA+AGG | 0.558879 | 2_2:-3239214 | Msa0231030:CDS |
| GTTTAAGACACAGGTTTGGT+TGG | 0.561495 | 2_2:+3239555 | None:intergenic |
| GCAAGTCCATGTAACTTGAA+AGG | 0.563238 | 2_2:+3233917 | None:intergenic |
| GTGGCTCCTCGAAATACCAT+TGG | 0.564896 | 2_2:-3238318 | Msa0231030:CDS |
| GGGGCCATGCAAATTCAAAT+GGG | 0.565061 | 2_2:-3232471 | Msa0231030:CDS |
| TATCCCAAATTTAGGGGTGA+GGG | 0.566083 | 2_2:-3232038 | Msa0231030:three_prime_UTR |
| TTACTTCTGTGGAATGGCAC+CGG | 0.567545 | 2_2:-3234490 | Msa0231030:CDS |
| TGGGAAATGTGACGTGGAGT+TGG | 0.568365 | 2_2:-3231811 | Msa0231030:three_prime_UTR |
| TGAAGCTTCAGGGCAGTGGA+TGG | 0.570556 | 2_2:-3235303 | Msa0231030:CDS |
| TCATGATCAGATGGAGGCGG+CGG | 0.571126 | 2_2:+3239440 | None:intergenic |
| CCAGAAGCATCAGATGAGAC+TGG | 0.571285 | 2_2:-3234850 | Msa0231030:intron |
| ACTACTACTACTCATCATCA+TGG | 0.575631 | 2_2:-3239178 | Msa0231030:CDS |
| GATGGAACGAGATGGATGGA+AGG | 0.576040 | 2_2:+3233883 | None:intergenic |
| ACCCTGGTTATTTACAGCTG+GGG | 0.577398 | 2_2:-3232207 | Msa0231030:CDS |
| TTATGTTGAGTGGTTCAAAT+GGG | 0.579837 | 2_2:-3236353 | Msa0231030:CDS |
| CATATTGGATATGACATCAA+GGG | 0.580562 | 2_2:-3238261 | Msa0231030:CDS |
| GAATGAGTAAGGGTGGGTGC+GGG | 0.583525 | 2_2:-3239613 | Msa0231030:five_prime_UTR |
| GAAGGTTCATTCCTTCAAAG+TGG | 0.585876 | 2_2:-3236288 | Msa0231030:CDS |
| AAGGTTCATTCCTTCAAAGT+GGG | 0.586722 | 2_2:-3236287 | Msa0231030:CDS |
| TCGGAATAATCATGATCAGA+TGG | 0.587262 | 2_2:+3239431 | None:intergenic |
| TTCGGAAATGGAATCGTAGT+CGG | 0.588585 | 2_2:+3239376 | None:intergenic |
| TCTGTCTGATATTCATATTG+TGG | 0.589903 | 2_2:-3235092 | Msa0231030:CDS |
| TGGACTGCAAGTTTCACCCC+AGG | 0.591777 | 2_2:-3232232 | Msa0231030:CDS |
| GATGTACTTCTGTTAAACAC+TGG | 0.592024 | 2_2:-3234928 | Msa0231030:CDS |
| TGAGTACAATGATGAGGAAG+TGG | 0.592725 | 2_2:-3236573 | Msa0231030:CDS |
| TTGGAGAGGTCCCTTTGAAG+TGG | 0.595478 | 2_2:-3238299 | Msa0231030:CDS |
| TGATGGAACTGTCCGTGTCT+GGG | 0.597835 | 2_2:-3235185 | Msa0231030:CDS |
| CACTGTTATCCCAAATTTAG+GGG | 0.601906 | 2_2:-3232044 | Msa0231030:three_prime_UTR |
| GATCTTCATCAGGAAGGAGG+AGG | 0.602770 | 2_2:-3238470 | Msa0231030:CDS |
| GACGTTGATGACTCGGAAGG+TGG | 0.608124 | 2_2:-3238506 | Msa0231030:CDS |
| AATGAATGAATGAGTAAGGG+TGG | 0.610173 | 2_2:-3239620 | Msa0231030:five_prime_UTR |
| CATGCAAATTCAAATGGGAG+AGG | 0.611790 | 2_2:-3232466 | Msa0231030:intron |
| AGCCGAGATGAAGAAGAAAG+AGG | 0.612426 | 2_2:-3239468 | Msa0231030:CDS |
| CTTCAAAGGGACCTCTCCAA+TGG | 0.612908 | 2_2:+3238302 | None:intergenic |
| TAATAACAATACCTCCAGGA+TGG | 0.614469 | 2_2:+3233756 | None:intergenic |
| ATAAAGAAGATGGAACGAGA+TGG | 0.615602 | 2_2:+3233875 | None:intergenic |
| TCATAGCATTGTCATATGCA+GGG | 0.615965 | 2_2:+3235664 | None:intergenic |
| TCTGTGGAATGGCACCGGAA+AGG | 0.618310 | 2_2:-3234485 | Msa0231030:intron |
| TAATCATGATCAGATGGAGG+CGG | 0.619519 | 2_2:+3239437 | None:intergenic |
| AAACCAGACTTACGCAGAGA+CGG | 0.621759 | 2_2:+3235069 | None:intergenic |
| TGGCAGATGTCTGAGACAGT+GGG | 0.626311 | 2_2:-3235152 | Msa0231030:CDS |
| CAGTTTCAACCTCCCAGACA+CGG | 0.626919 | 2_2:+3235173 | None:intergenic |
| AGCTCCGATCTTCATCAGGA+AGG | 0.628030 | 2_2:-3238476 | Msa0231030:CDS |
| TATGTTAGAGGAATTCGCAA+TGG | 0.631262 | 2_2:-3236110 | Msa0231030:CDS |
| CAGGTGATAATTTAATTGTG+GGG | 0.633645 | 2_2:-3233642 | Msa0231030:CDS |
| GTTGGAATATACTCTAAAGG+AGG | 0.636366 | 2_2:+3235849 | None:intergenic |
| TCCGATCTTCATCAGGAAGG+AGG | 0.636888 | 2_2:-3238473 | Msa0231030:CDS |
| ATATTGGATATGACATCAAG+GGG | 0.637046 | 2_2:-3238260 | Msa0231030:CDS |
| TCCTCGAAATACCATTGGAG+AGG | 0.637496 | 2_2:-3238313 | Msa0231030:CDS |
| CAATTCTGACTCCCAAGACG+AGG | 0.643332 | 2_2:-3239146 | Msa0231030:CDS |
| AGAAAGCACCTAGTGTACGC+TGG | 0.647760 | 2_2:-3234652 | Msa0231030:CDS |
| TCTTTCTGGGAAATGTGACG+TGG | 0.650218 | 2_2:-3231817 | Msa0231030:three_prime_UTR |
| ATTCGATATAGCATGTTATG+GGG | 0.653568 | 2_2:+3235363 | None:intergenic |
| TTGGGAGTCAGAATTGTCGT+CGG | 0.654239 | 2_2:+3239153 | None:intergenic |
| TTCTGACTCCCAAGACGAGG+AGG | 0.656012 | 2_2:-3239143 | Msa0231030:intron |
| GAAGTCAATATCATGGTTTG+GGG | 0.657348 | 2_2:-3232359 | Msa0231030:CDS |
| TTGATGTCATATCCAATATG+GGG | 0.658360 | 2_2:+3238264 | None:intergenic |
| CTTTGATGAGTACAATGATG+AGG | 0.661806 | 2_2:-3236579 | Msa0231030:CDS |
| GTGATGAAGAAGAACAGCAA+AGG | 0.662428 | 2_2:-3234900 | Msa0231030:CDS |
| ATGTGCAGGATTATGTTGAG+TGG | 0.665536 | 2_2:-3236363 | Msa0231030:intron |
| CCCTAAATTTGGGATAACAG+TGG | 0.669448 | 2_2:+3232045 | None:intergenic |
| CTTAAAGATGATAAACACGA+TGG | 0.672298 | 2_2:-3234629 | Msa0231030:CDS |
| AGGATGGACTGCAATTGACG+AGG | 0.675101 | 2_2:+3233772 | None:intergenic |
| AGAATGTTACTTCTGTGGAA+TGG | 0.676838 | 2_2:-3234496 | Msa0231030:CDS |
| TGCTGAGAGTGATTCATCTG+AGG | 0.679468 | 2_2:-3238447 | Msa0231030:CDS |
| ATGAATGAATGAATGAGTAA+GGG | 0.682657 | 2_2:-3239623 | Msa0231030:five_prime_UTR |
| GCCCCAGCTGTAAATAACCA+GGG | 0.684465 | 2_2:+3232206 | None:intergenic |
| ACAATATGAATATCAGACAG+AGG | 0.684612 | 2_2:+3235094 | None:intergenic |
| GAATAATCATGATCAGATGG+AGG | 0.684661 | 2_2:+3239434 | None:intergenic |
| TAGGACGTTGATGACTCGGA+AGG | 0.686071 | 2_2:-3238509 | Msa0231030:CDS |
| TGGCCCCGTAGAATTTCCAA+AGG | 0.689804 | 2_2:+3232487 | None:intergenic |
| TAAATAACCAGGGTTGCCTG+GGG | 0.690591 | 2_2:+3232216 | None:intergenic |
| GCCCTAAATTTATCCCACAA+AGG | 0.699342 | 2_2:-3235782 | Msa0231030:intron |
| ACGCACCCGAACCCAAACGA+AGG | 0.702076 | 2_2:-3236306 | Msa0231030:CDS |
| TTTGTGGGATAAATTTAGGG+CGG | 0.703720 | 2_2:+3235784 | None:intergenic |
| TCTGAGCACGAAGCAAACAA+GGG | 0.712455 | 2_2:+3232577 | None:intergenic |
| ATGAATGAATGAGTAAGGGT+GGG | 0.713050 | 2_2:-3239619 | Msa0231030:five_prime_UTR |
| TGTGGATCAAAGTCAGAATG+TGG | 0.716263 | 2_2:+3236497 | None:intergenic |
| TGGAACTGTCCGTGTCTGGG+AGG | 0.720097 | 2_2:-3235182 | Msa0231030:CDS |
| TCAATTGCAGTCCATCCTGG+AGG | 0.730857 | 2_2:-3233767 | Msa0231030:intron |
| GTTCCTTTGGAAATTCTACG+GGG | 0.734441 | 2_2:-3232490 | Msa0231030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATGTTTATAATCA+AGG | + | chr2_2:3236336-3236355 | None:intergenic | 10.0% |
| !!! | TATAATTAAAATTTTAGTTG+GGG | + | chr2_2:3236648-3236667 | None:intergenic | 10.0% |
| !!! | CTATAATTAAAATTTTAGTT+GGG | + | chr2_2:3236649-3236668 | None:intergenic | 10.0% |
| !!! | TCTATAATTAAAATTTTAGT+TGG | + | chr2_2:3236650-3236669 | None:intergenic | 10.0% |
| !! | TTTAAAAAATTGTTTATATG+AGG | + | chr2_2:3237276-3237295 | None:intergenic | 10.0% |
| !!! | ATATAAACAATTTTTTAAAC+TGG | - | chr2_2:3237277-3237296 | Msa0231030:intron | 10.0% |
| !!! | ATTTATCAAAATATTTTTAG+TGG | + | chr2_2:3239226-3239245 | None:intergenic | 10.0% |
| !!! | TACAATTTTTTTGTAATATT+TGG | - | chr2_2:3239638-3239657 | Msa0231030:five_prime_UTR | 10.0% |
| !! | TAAACAAAGTTAAATAGTTT+GGG | + | chr2_2:3232655-3232674 | None:intergenic | 15.0% |
| !! | TTAAACAAAGTTAAATAGTT+TGG | + | chr2_2:3232656-3232675 | None:intergenic | 15.0% |
| !! | AACTTCTAATCATATATAAA+AGG | - | chr2_2:3233831-3233850 | Msa0231030:CDS | 15.0% |
| !!! | GAAATTTCTAAAAATATTGT+TGG | + | chr2_2:3234446-3234465 | None:intergenic | 15.0% |
| !!! | ACAATATTTTTAGAAATTTC+AGG | - | chr2_2:3234446-3234465 | Msa0231030:intron | 15.0% |
| !!! | AGTATTTTAAATTTTTCAGT+CGG | - | chr2_2:3234594-3234613 | Msa0231030:intron | 15.0% |
| !!! | AGTATTTTAAATTTTTCAGT+CGG | - | chr2_2:3234594-3234613 | Msa0231030:intron | 15.0% |
| !!! | TAATATTACCTTTTCTTTTT+CGG | - | chr2_2:3235451-3235470 | Msa0231030:intron | 15.0% |
| !!! | AATTTTAATTATAGAAAAGC+AGG | - | chr2_2:3236655-3236674 | Msa0231030:intron | 15.0% |
| !! | AAACAAAGAAAGTAAAAAAA+AGG | + | chr2_2:3238015-3238034 | None:intergenic | 15.0% |
| !! | CAATAAAAAAAAAAAAGTCA+AGG | + | chr2_2:3238064-3238083 | None:intergenic | 15.0% |
| !!! | CTTTTTTATCATTCAAATAA+AGG | + | chr2_2:3238257-3238276 | None:intergenic | 15.0% |
| !!! | CTTTATTTGAATGATAAAAA+AGG | - | chr2_2:3238255-3238274 | Msa0231030:CDS | 15.0% |
| !! | AATTCTAATTACAAATATGT+CGG | + | chr2_2:3238376-3238395 | None:intergenic | 15.0% |
| !!! | TTTATTTTTCCTTTAGTTTA+TGG | - | chr2_2:3238451-3238470 | Msa0231030:CDS | 15.0% |
| !! | TTAAAATATTGTCTGATATT+TGG | - | chr2_2:3238968-3238987 | Msa0231030:intron | 15.0% |
| !! | ATTACAAAAAAATTGTACAA+TGG | + | chr2_2:3239635-3239654 | None:intergenic | 15.0% |
| !! | TATAAAACTTAACTACTCAT+GGG | + | chr2_2:3232600-3232619 | None:intergenic | 20.0% |
| !! | TTATAAAACTTAACTACTCA+TGG | + | chr2_2:3232601-3232620 | None:intergenic | 20.0% |
| !! | CTATTATGATATCTATAACT+AGG | - | chr2_2:3232792-3232811 | Msa0231030:intron | 20.0% |
| !! | TGTTCAAAATCAATTATTGT+AGG | - | chr2_2:3232851-3232870 | Msa0231030:intron | 20.0% |
| !!! | TAATTATAATGATGATGAAG+AGG | + | chr2_2:3232968-3232987 | None:intergenic | 20.0% |
| !! | AATTCCCATTTATATTACTA+TGG | - | chr2_2:3233000-3233019 | Msa0231030:intron | 20.0% |
| !! | AAAAGATAAAGAAGAAAGAA+AGG | - | chr2_2:3233143-3233162 | Msa0231030:intron | 20.0% |
| !! | AAAGATAAAGAAGAAAGAAA+GGG | - | chr2_2:3233144-3233163 | Msa0231030:intron | 20.0% |
| !! | AAAGAATGCAATAATGAAAA+TGG | + | chr2_2:3233259-3233278 | None:intergenic | 20.0% |
| !! | TTATCATCAAATGATGTAAA+CGG | + | chr2_2:3233623-3233642 | None:intergenic | 20.0% |
| !!! | ATCATTGAATAATTTGTCTT+AGG | - | chr2_2:3234354-3234373 | Msa0231030:intron | 20.0% |
| !! | GAAAAAAAGTAAACACAAAT+TGG | + | chr2_2:3234494-3234513 | None:intergenic | 20.0% |
| !! | TGTGAAATAATATCACAATA+GGG | + | chr2_2:3234712-3234731 | None:intergenic | 20.0% |
| !! | TTGTGAAATAATATCACAAT+AGG | + | chr2_2:3234713-3234732 | None:intergenic | 20.0% |
| !! | ATTGTGATATTATTTCACAA+TGG | - | chr2_2:3234713-3234732 | Msa0231030:intron | 20.0% |
| !!! | TAATTTGAAATAAGTCGATT+AGG | - | chr2_2:3235156-3235175 | Msa0231030:CDS | 20.0% |
| !! | AAGGAAATTATTAACATCAA+AGG | + | chr2_2:3235479-3235498 | None:intergenic | 20.0% |
| !! | ATATGAATTAATCTCTTCTT+GGG | + | chr2_2:3235555-3235574 | None:intergenic | 20.0% |
| !! | AGTAAATCAGTTCTTTAATA+CGG | + | chr2_2:3235812-3235831 | None:intergenic | 20.0% |
| !!! | GATGTTAATAGTGAATATTT+TGG | - | chr2_2:3236112-3236131 | Msa0231030:CDS | 20.0% |
| !! | AGCTAATAAATCAACAATAA+AGG | + | chr2_2:3236953-3236972 | None:intergenic | 20.0% |
| !!! | GTTGATTTATTAGCTAATAA+TGG | - | chr2_2:3236958-3236977 | Msa0231030:intron | 20.0% |
| !! | AATAACAATAATGCACTTAA+AGG | - | chr2_2:3237037-3237056 | Msa0231030:intron | 20.0% |
| !!! | TTAGCTGATTTTTTATCTTA+CGG | - | chr2_2:3237317-3237336 | Msa0231030:intron | 20.0% |
| !! | ACTTACTTAAGAACTTTATA+TGG | + | chr2_2:3237811-3237830 | None:intergenic | 20.0% |
| !! | TGTATAATTTAATCTGCATA+GGG | + | chr2_2:3237895-3237914 | None:intergenic | 20.0% |
| !! | TAAATACAAAGTCAAACTTA+AGG | + | chr2_2:3238435-3238454 | None:intergenic | 20.0% |
| !! | TTGAAAAAAGACTACTAAAA+AGG | - | chr2_2:3238563-3238582 | Msa0231030:intron | 20.0% |
| !!! | AACTTGTTATAAAAAATCTG+TGG | + | chr2_2:3238723-3238742 | None:intergenic | 20.0% |
| !!! | TGTTTTTGATTTTGTTAACT+TGG | - | chr2_2:3238945-3238964 | Msa0231030:intron | 20.0% |
| ! | CATTCATTCATTCATTCATT+GGG | + | chr2_2:3231751-3231770 | None:intergenic | 25.0% |
| ! | TCATTCATTCATTCATTCAT+TGG | + | chr2_2:3231752-3231771 | None:intergenic | 25.0% |
| ! | AATGAATGAATGAATGAGTA+AGG | - | chr2_2:3231755-3231774 | Msa0231030:three_prime_UTR | 25.0% |
| ! | ATGAATGAATGAATGAGTAA+GGG | - | chr2_2:3231756-3231775 | Msa0231030:three_prime_UTR | 25.0% |
| ! | TATAGATATCATAATAGCAG+AGG | + | chr2_2:3232789-3232808 | None:intergenic | 25.0% |
| ! | TTATGATATCTATAACTAGG+AGG | - | chr2_2:3232795-3232814 | Msa0231030:intron | 25.0% |
| ! | ATAGAAAAAGAACAACAACA+CGG | + | chr2_2:3232822-3232841 | None:intergenic | 25.0% |
| ! | AGGTCCATAGTAATATAAAT+GGG | + | chr2_2:3233007-3233026 | None:intergenic | 25.0% |
| !!! | ATGTTGATGATTCTAAGAAT+TGG | - | chr2_2:3233194-3233213 | Msa0231030:intron | 25.0% |
| ! | TGCATATATCTGTAATACAT+TGG | - | chr2_2:3233404-3233423 | Msa0231030:intron | 25.0% |
| !!! | TGGTGTCAAGTTTTTTTTTT+TGG | - | chr2_2:3233464-3233483 | Msa0231030:intron | 25.0% |
| ! | TATCATCAAATGATGTAAAC+GGG | + | chr2_2:3233622-3233641 | None:intergenic | 25.0% |
| ! | GTTTACCAAAAAAACAATGA+TGG | - | chr2_2:3234045-3234064 | Msa0231030:intron | 25.0% |
| !!! | TTCATCCATCATTGTTTTTT+TGG | + | chr2_2:3234053-3234072 | None:intergenic | 25.0% |
| ! | TATGTAATCAACTCTTTAAC+TGG | + | chr2_2:3234135-3234154 | None:intergenic | 25.0% |
| !! | TTAAAGAGTTGATTACATAC+AGG | - | chr2_2:3234136-3234155 | Msa0231030:intron | 25.0% |
| ! | TATGTAATCAACTCTTTAAC+TGG | + | chr2_2:3234135-3234154 | None:intergenic | 25.0% |
| ! | TCTTTATAATAGCCTAACAT+GGG | + | chr2_2:3234317-3234336 | None:intergenic | 25.0% |
| ! | TTCTTTATAATAGCCTAACA+TGG | + | chr2_2:3234318-3234337 | None:intergenic | 25.0% |
| ! | ATTTGTCTTAGGAACATAAT+TGG | - | chr2_2:3234365-3234384 | Msa0231030:intron | 25.0% |
| ! | TAAAAATATTGTTGGTACAC+TGG | + | chr2_2:3234438-3234457 | None:intergenic | 25.0% |
| !! | TACTGAAATCATGACTATTT+TGG | + | chr2_2:3234578-3234597 | None:intergenic | 25.0% |
| ! | GTGAAATAATATCACAATAG+GGG | + | chr2_2:3234711-3234730 | None:intergenic | 25.0% |
| !! | GCTTTTATTCTTGATCATTT+AGG | - | chr2_2:3234769-3234788 | Msa0231030:intron | 25.0% |
| ! | TTTATTCTTGATCATTTAGG+CGG | - | chr2_2:3234772-3234791 | Msa0231030:intron | 25.0% |
| ! | GACAAAAGATGAAATCAAAA+TGG | - | chr2_2:3234833-3234852 | Msa0231030:intron | 25.0% |
| !!! | TTTTGAAACTCAATTAGCAT+GGG | - | chr2_2:3234964-3234983 | Msa0231030:intron | 25.0% |
| ! | ACAAAACAGATATGCATTTA+AGG | + | chr2_2:3234995-3235014 | None:intergenic | 25.0% |
| !! | ATAATTTCCTTTTACTTCTC+AGG | - | chr2_2:3235488-3235507 | Msa0231030:intron | 25.0% |
| ! | GATATGAATTAATCTCTTCT+TGG | + | chr2_2:3235556-3235575 | None:intergenic | 25.0% |
| ! | AATAATACATTTCAATTGCC+AGG | - | chr2_2:3235672-3235691 | Msa0231030:CDS | 25.0% |
| ! | TATTCGATATAGCATGTTAT+GGG | + | chr2_2:3236020-3236039 | None:intergenic | 25.0% |
| ! | ATATTCGATATAGCATGTTA+TGG | + | chr2_2:3236021-3236040 | None:intergenic | 25.0% |
| ! | ACATGCTATATCGAATATAA+AGG | - | chr2_2:3236023-3236042 | Msa0231030:CDS | 25.0% |
| !!! | GAAGATTCAACATTGATTTA+TGG | + | chr2_2:3236417-3236436 | None:intergenic | 25.0% |
| ! | AATGTTGAATCTTCCATTTA+GGG | - | chr2_2:3236423-3236442 | Msa0231030:intron | 25.0% |
| !! | TATAAGGTTAAGGCATTTAA+AGG | - | chr2_2:3236773-3236792 | Msa0231030:intron | 25.0% |
| ! | GTATTTATATTGAACCTTAG+TGG | - | chr2_2:3236848-3236867 | Msa0231030:intron | 25.0% |
| !!! | GTGCATTATTGTTATTTCAA+CGG | + | chr2_2:3237033-3237052 | None:intergenic | 25.0% |
| ! | TATCTTACGGAAAATTTATG+AGG | - | chr2_2:3237330-3237349 | Msa0231030:intron | 25.0% |
| !! | AGGCATACAATTTTAAACTT+GGG | - | chr2_2:3237350-3237369 | Msa0231030:intron | 25.0% |
| ! | TTCACGTAAAGAATATGTTA+AGG | + | chr2_2:3237391-3237410 | None:intergenic | 25.0% |
| ! | CTTTGTACAAATAAAGAAGA+TGG | + | chr2_2:3237517-3237536 | None:intergenic | 25.0% |
| ! | CAAATAAAAAAGCTTGATAC+CGG | - | chr2_2:3237573-3237592 | Msa0231030:intron | 25.0% |
| ! | GTGTATAATTTAATCTGCAT+AGG | + | chr2_2:3237896-3237915 | None:intergenic | 25.0% |
| !! | GTACAAATCTTTGAAAAATG+AGG | - | chr2_2:3238097-3238116 | Msa0231030:intron | 25.0% |
| ! | AAAAAGGTCATTATACTACT+TGG | - | chr2_2:3238271-3238290 | Msa0231030:CDS | 25.0% |
| ! | TAAACAACAGCTCATTATTT+AGG | + | chr2_2:3238646-3238665 | None:intergenic | 25.0% |
| ! | TTATTTGATTAGCAGCAATT+TGG | - | chr2_2:3238663-3238682 | Msa0231030:intron | 25.0% |
| !! | ACAACGTTGTTAATATCTTT+TGG | + | chr2_2:3238766-3238785 | None:intergenic | 25.0% |
| !!! | ATGATATTGACTTCTAAAAG+AGG | + | chr2_2:3239014-3239033 | None:intergenic | 25.0% |
| !!! | TCTTTTAGAAGTCAATATCA+TGG | - | chr2_2:3239013-3239032 | Msa0231030:intron | 25.0% |
| ! | TTTCCCATTAACAAAACTAT+AGG | + | chr2_2:3239375-3239394 | None:intergenic | 25.0% |
| !!! | ATCAATTTTAAGAAATCCGA+TGG | - | chr2_2:3239533-3239552 | Msa0231030:five_prime_UTR | 25.0% |
| !!! | GTATGGTAATTGATAATGAT+TGG | - | chr2_2:3239590-3239609 | Msa0231030:five_prime_UTR | 25.0% |
| TGTAACGATGAAGAAAAAGA+CGG | - | chr2_2:3231881-3231900 | Msa0231030:three_prime_UTR | 30.0% | |
| TCTGAATTAGAACATGAAGA+AGG | - | chr2_2:3232165-3232184 | Msa0231030:three_prime_UTR | 30.0% | |
| GAAGTTGTTGAATCGAAATT+GGG | + | chr2_2:3232283-3232302 | None:intergenic | 30.0% | |
| !!! | AAGCTTTTTCACCCTATTTA+CGG | - | chr2_2:3232314-3232333 | Msa0231030:intron | 30.0% |
| !!! | GCTGTTTTTATGAGCTATAT+TGG | - | chr2_2:3232458-3232477 | Msa0231030:intron | 30.0% |
| CAGGTCCATAGTAATATAAA+TGG | + | chr2_2:3233008-3233027 | None:intergenic | 30.0% | |
| TTGATGTCATATCCAATATG+GGG | + | chr2_2:3233118-3233137 | None:intergenic | 30.0% | |
| CTTGATGTCATATCCAATAT+GGG | + | chr2_2:3233119-3233138 | None:intergenic | 30.0% | |
| CATATTGGATATGACATCAA+GGG | - | chr2_2:3233118-3233137 | Msa0231030:intron | 30.0% | |
| ATATTGGATATGACATCAAG+GGG | - | chr2_2:3233119-3233138 | Msa0231030:intron | 30.0% | |
| AAAGAAAGGGAAGACAAATT+GGG | - | chr2_2:3233157-3233176 | Msa0231030:intron | 30.0% | |
| ATCATCAACATTTGCAAGAA+AGG | + | chr2_2:3233185-3233204 | None:intergenic | 30.0% | |
| TAAGTGCGTAGATTGTTAAT+AGG | - | chr2_2:3233380-3233399 | Msa0231030:intron | 30.0% | |
| ! | GGTCTTTTTACAGTGTATAT+AGG | - | chr2_2:3233425-3233444 | Msa0231030:intron | 30.0% |
| !!! | TTTTTTTTTTGGTCGCTAAG+AGG | - | chr2_2:3233475-3233494 | Msa0231030:intron | 30.0% |
| GATTTACTTACAACCTTTGA+TGG | - | chr2_2:3233497-3233516 | Msa0231030:intron | 30.0% | |
| TATCTGTGTTTCTTGTACTT+GGG | - | chr2_2:3233529-3233548 | Msa0231030:intron | 30.0% | |
| ! | TGAATGATGATGTAGAAATC+TGG | - | chr2_2:3233700-3233719 | Msa0231030:intron | 30.0% |
| GAGAATTAGTGAGATATATG+AGG | + | chr2_2:3233726-3233745 | None:intergenic | 30.0% | |
| !! | GTCTTCATTTTTAAGAGAGA+AGG | + | chr2_2:3233797-3233816 | None:intergenic | 30.0% |
| !! | ATGTGTTTGAGCTATTTTAG+GGG | + | chr2_2:3234090-3234109 | None:intergenic | 30.0% |
| !! | CATGTGTTTGAGCTATTTTA+GGG | + | chr2_2:3234091-3234110 | None:intergenic | 30.0% |
| !! | TCATGTGTTTGAGCTATTTT+AGG | + | chr2_2:3234092-3234111 | None:intergenic | 30.0% |
| ! | TATTTTACATGGGTCTTTCT+TGG | + | chr2_2:3234191-3234210 | None:intergenic | 30.0% |
| ! | AAGTAAACACAAATTGGTCT+CGG | + | chr2_2:3234488-3234507 | None:intergenic | 30.0% |
| TCGGTTTCAATGTTATAGTT+TGG | - | chr2_2:3234613-3234632 | Msa0231030:CDS | 30.0% | |
| TCGGTTTCAATGTTATAGTT+TGG | - | chr2_2:3234613-3234632 | Msa0231030:CDS | 30.0% | |
| GAAAGAAAGTAAATACAGAC+CGG | + | chr2_2:3234909-3234928 | None:intergenic | 30.0% | |
| !!! | GTTTTGAAACTCAATTAGCA+TGG | - | chr2_2:3234963-3234982 | Msa0231030:intron | 30.0% |
| ! | ATATCTGTTTTGTAATGTGC+AGG | - | chr2_2:3235002-3235021 | Msa0231030:intron | 30.0% |
| ATTATGTTGAGTGGTTCAAA+TGG | - | chr2_2:3235025-3235044 | Msa0231030:intron | 30.0% | |
| TTATGTTGAGTGGTTCAAAT+GGG | - | chr2_2:3235026-3235045 | Msa0231030:intron | 30.0% | |
| !! | TTTGCTTTATTTGTCTAACC+TGG | + | chr2_2:3235192-3235211 | None:intergenic | 30.0% |
| ! | TGTATGTTTCTACTTTCTAC+AGG | - | chr2_2:3235238-3235257 | Msa0231030:intron | 30.0% |
| GACAGAAAAAGCAAATCATT+TGG | - | chr2_2:3235361-3235380 | Msa0231030:CDS | 30.0% | |
| ACCTTTGTGGGATAAATTTA+GGG | + | chr2_2:3235601-3235620 | None:intergenic | 30.0% | |
| TACCTTTGTGGGATAAATTT+AGG | + | chr2_2:3235602-3235621 | None:intergenic | 30.0% | |
| ATCAATATTAAGCTGGACAT+AGG | + | chr2_2:3235946-3235965 | None:intergenic | 30.0% | |
| ATTCAGGATCAATATTAAGC+TGG | + | chr2_2:3235953-3235972 | None:intergenic | 30.0% | |
| !! | TCCTTTTTATTTGGAAGCTT+TGG | + | chr2_2:3235984-3236003 | None:intergenic | 30.0% |
| ! | GGTTTAAGCTCCTTTTTATT+TGG | + | chr2_2:3235993-3236012 | None:intergenic | 30.0% |
| ATTCGATATAGCATGTTATG+GGG | + | chr2_2:3236019-3236038 | None:intergenic | 30.0% | |
| TCAATTTCTATTGAAGCTTC+AGG | - | chr2_2:3236065-3236084 | Msa0231030:CDS | 30.0% | |
| CAATTTCTATTGAAGCTTCA+GGG | - | chr2_2:3236066-3236085 | Msa0231030:CDS | 30.0% | |
| !!! | TTTTGGTTTCGATTAAACAG+TGG | - | chr2_2:3236129-3236148 | Msa0231030:intron | 30.0% |
| TCACAAAATCCAATTAAGTG+AGG | + | chr2_2:3236165-3236184 | None:intergenic | 30.0% | |
| ! | CACTTAATTGGATTTTGTGA+AGG | - | chr2_2:3236165-3236184 | Msa0231030:intron | 30.0% |
| ACAATATGAATATCAGACAG+AGG | + | chr2_2:3236288-3236307 | None:intergenic | 30.0% | |
| TCTGTCTGATATTCATATTG+TGG | - | chr2_2:3236287-3236306 | Msa0231030:CDS | 30.0% | |
| AAGTCACGTGTATATCAAAA+AGG | + | chr2_2:3236386-3236405 | None:intergenic | 30.0% | |
| CAATGTTGAATCTTCCATTT+AGG | - | chr2_2:3236422-3236441 | Msa0231030:intron | 30.0% | |
| ATGTTGAATCTTCCATTTAG+GGG | - | chr2_2:3236424-3236443 | Msa0231030:intron | 30.0% | |
| TATATGTTAACATGGGAGTT+GGG | + | chr2_2:3236624-3236643 | None:intergenic | 30.0% | |
| TTATATGTTAACATGGGAGT+TGG | + | chr2_2:3236625-3236644 | None:intergenic | 30.0% | |
| TTGGGGTTATATGTTAACAT+GGG | + | chr2_2:3236631-3236650 | None:intergenic | 30.0% | |
| AAATAACAGAACAAACTAGC+TGG | + | chr2_2:3236681-3236700 | None:intergenic | 30.0% | |
| CTTAAAGATGATAAACACGA+TGG | - | chr2_2:3236750-3236769 | Msa0231030:intron | 30.0% | |
| ATGATAAACACGATGGTATA+AGG | - | chr2_2:3236757-3236776 | Msa0231030:intron | 30.0% | |
| TGAGAAAACCTAACTAGAAA+TGG | + | chr2_2:3236812-3236831 | None:intergenic | 30.0% | |
| AGTCTTTATGTCTTTCAACA+TGG | - | chr2_2:3237111-3237130 | Msa0231030:intron | 30.0% | |
| ! | GAGGCATACAATTTTAAACT+TGG | - | chr2_2:3237349-3237368 | Msa0231030:intron | 30.0% |
| ! | AAGTTTTTGTGAGAGTTTCT+TGG | + | chr2_2:3237442-3237461 | None:intergenic | 30.0% |
| !! | AAACTTCCTTTCAAGTTACA+TGG | - | chr2_2:3237456-3237475 | Msa0231030:intron | 30.0% |
| TAACTAATAACAATACCTCC+AGG | + | chr2_2:3237630-3237649 | None:intergenic | 30.0% | |
| CAATTAAATTATCACCTGCA+TGG | + | chr2_2:3237735-3237754 | None:intergenic | 30.0% | |
| TGCAGGTGATAATTTAATTG+TGG | - | chr2_2:3237735-3237754 | Msa0231030:intron | 30.0% | |
| GCAGGTGATAATTTAATTGT+GGG | - | chr2_2:3237736-3237755 | Msa0231030:intron | 30.0% | |
| CAGGTGATAATTTAATTGTG+GGG | - | chr2_2:3237737-3237756 | Msa0231030:intron | 30.0% | |
| !! | AAAGCTTTGTTGGTTTGATA+TGG | - | chr2_2:3237771-3237790 | Msa0231030:intron | 30.0% |
| CTTTATATGGTTTAGACGAA+AGG | + | chr2_2:3237798-3237817 | None:intergenic | 30.0% | |
| TTTCTGTTGATCTTACATCA+TGG | - | chr2_2:3237947-3237966 | Msa0231030:intron | 30.0% | |
| !! | CTTATACAGAACTTTGGAAT+TGG | + | chr2_2:3238038-3238057 | None:intergenic | 30.0% |
| AGGTTTCTTATACAGAACTT+TGG | + | chr2_2:3238044-3238063 | None:intergenic | 30.0% | |
| AACTAAACAGCAATCAGTAA+AGG | + | chr2_2:3238188-3238207 | None:intergenic | 30.0% | |
| CTAATCTCACCATAAACTAA+AGG | + | chr2_2:3238463-3238482 | None:intergenic | 30.0% | |
| TTTCAAAGAATAGTGTTTCC+CGG | + | chr2_2:3238549-3238568 | None:intergenic | 30.0% | |
| AAATCCTCTTATTGTTCCTT+TGG | - | chr2_2:3238876-3238895 | Msa0231030:intron | 30.0% | |
| ATTTCCAAAGGAACAATAAG+AGG | + | chr2_2:3238883-3238902 | None:intergenic | 30.0% | |
| ! | TTGTTCCTTTGGAAATTCTA+CGG | - | chr2_2:3238887-3238906 | Msa0231030:intron | 30.0% |
| TAGAAGTCAATATCATGGTT+TGG | - | chr2_2:3239018-3239037 | Msa0231030:intron | 30.0% | |
| AGAAGTCAATATCATGGTTT+GGG | - | chr2_2:3239019-3239038 | Msa0231030:intron | 30.0% | |
| GCAATGCAAATAAACTTAAG+AGG | + | chr2_2:3239119-3239138 | None:intergenic | 30.0% | |
| CTTAAGTTTATTTGCATTGC+AGG | - | chr2_2:3239119-3239138 | Msa0231030:intron | 30.0% | |
| TATTTGCATTGCAGGAATAT+TGG | - | chr2_2:3239127-3239146 | Msa0231030:intron | 30.0% | |
| AAAATTGGGAATAGAGTTAC+AGG | + | chr2_2:3239284-3239303 | None:intergenic | 30.0% | |
| AACAATTGGGGAACAAAATT+GGG | + | chr2_2:3239298-3239317 | None:intergenic | 30.0% | |
| TAACAATTGGGGAACAAAAT+TGG | + | chr2_2:3239299-3239318 | None:intergenic | 30.0% | |
| AGCTTTCTGTTTAACAATTG+GGG | + | chr2_2:3239310-3239329 | None:intergenic | 30.0% | |
| CAGCTTTCTGTTTAACAATT+GGG | + | chr2_2:3239311-3239330 | None:intergenic | 30.0% | |
| TCAGCTTTCTGTTTAACAAT+TGG | + | chr2_2:3239312-3239331 | None:intergenic | 30.0% | |
| !!! | TCTGCCTATAGTTTTGTTAA+TGG | - | chr2_2:3239368-3239387 | Msa0231030:CDS | 30.0% |
| !!! | CTGCCTATAGTTTTGTTAAT+GGG | - | chr2_2:3239369-3239388 | Msa0231030:CDS | 30.0% |
| !! | TTCTTTGAAGTTGAAATACC+AGG | - | chr2_2:3239429-3239448 | Msa0231030:CDS | 30.0% |
| ! | AATAGTAAGCAGATTTTTGC+CGG | + | chr2_2:3239467-3239486 | None:intergenic | 30.0% |
| !! | TTGTACAATGGTGTTATGAA+AGG | + | chr2_2:3239623-3239642 | None:intergenic | 30.0% |
| AATGAATGAATGAGTAAGGG+TGG | - | chr2_2:3231759-3231778 | Msa0231030:three_prime_UTR | 35.0% | |
| ATGAATGAATGAGTAAGGGT+GGG | - | chr2_2:3231760-3231779 | Msa0231030:three_prime_UTR | 35.0% | |
| TTGTGAAACTAGGTAAGCTA+GGG | + | chr2_2:3231803-3231822 | None:intergenic | 35.0% | |
| TTTGTGAAACTAGGTAAGCT+AGG | + | chr2_2:3231804-3231823 | None:intergenic | 35.0% | |
| !! | TTTGGTTGGTTTGTGAAACT+AGG | + | chr2_2:3231813-3231832 | None:intergenic | 35.0% |
| GAAGAAGAAGAAGAAGAAGA+AGG | + | chr2_2:3231859-3231878 | None:intergenic | 35.0% | |
| TTCCTCTTTCTTCTTCATCT+CGG | + | chr2_2:3231916-3231935 | None:intergenic | 35.0% | |
| GAATAATCATGATCAGATGG+AGG | + | chr2_2:3231948-3231967 | None:intergenic | 35.0% | |
| TCGGAATAATCATGATCAGA+TGG | + | chr2_2:3231951-3231970 | None:intergenic | 35.0% | |
| TGAAGAAAGTGAGTGAAGAA+GGG | + | chr2_2:3232045-3232064 | None:intergenic | 35.0% | |
| ATGAAGAAAGTGAGTGAAGA+AGG | + | chr2_2:3232046-3232065 | None:intergenic | 35.0% | |
| TGATGAGTAGTAGTAGTAGT+AGG | + | chr2_2:3232198-3232217 | None:intergenic | 35.0% | |
| ACTACTACTACTCATCATCA+TGG | - | chr2_2:3232201-3232220 | Msa0231030:CDS | 35.0% | |
| CGAAGTTGTTGAATCGAAAT+TGG | + | chr2_2:3232284-3232303 | None:intergenic | 35.0% | |
| ! | AATAAGGTGTTTGTCCAAAC+AGG | + | chr2_2:3232340-3232359 | None:intergenic | 35.0% |
| TGAGCTATAAGCTGCAAATA+AGG | + | chr2_2:3232356-3232375 | None:intergenic | 35.0% | |
| !! | CTGACATAAGTTTTGTGAGA+CGG | + | chr2_2:3232555-3232574 | None:intergenic | 35.0% |
| TCTCACAAAACTTATGTCAG+TGG | - | chr2_2:3232555-3232574 | Msa0231030:CDS | 35.0% | |
| GTGGATAAGCCAATTTAAAC+AGG | - | chr2_2:3232574-3232593 | Msa0231030:CDS | 35.0% | |
| CCTTGATGTCATATCCAATA+TGG | + | chr2_2:3233120-3233139 | None:intergenic | 35.0% | |
| CCATATTGGATATGACATCA+AGG | - | chr2_2:3233117-3233136 | Msa0231030:intron | 35.0% | |
| GAAAGAAAGGGAAGACAAAT+TGG | - | chr2_2:3233156-3233175 | Msa0231030:intron | 35.0% | |
| TTGTACTCACTGACACATAT+AGG | - | chr2_2:3233279-3233298 | Msa0231030:intron | 35.0% | |
| !!! | TAGGTTTTGAGAGCATTTGT+TGG | - | chr2_2:3233444-3233463 | Msa0231030:intron | 35.0% |
| GATACAGTATCATCCATCAA+AGG | + | chr2_2:3233513-3233532 | None:intergenic | 35.0% | |
| GTATCTGTGTTTCTTGTACT+TGG | - | chr2_2:3233528-3233547 | Msa0231030:intron | 35.0% | |
| ACAGGACTTAACTCTAAATG+TGG | + | chr2_2:3233588-3233607 | None:intergenic | 35.0% | |
| CACATCCATGTTAATATGTG+GGG | + | chr2_2:3233669-3233688 | None:intergenic | 35.0% | |
| GCACATCCATGTTAATATGT+GGG | + | chr2_2:3233670-3233689 | None:intergenic | 35.0% | |
| TGCACATCCATGTTAATATG+TGG | + | chr2_2:3233671-3233690 | None:intergenic | 35.0% | |
| !! | TTTTTAAGAGAGAAGGACAC+TGG | + | chr2_2:3233790-3233809 | None:intergenic | 35.0% |
| TAAAAGGAAGCAGTACTTGT+AGG | - | chr2_2:3233847-3233866 | Msa0231030:CDS | 35.0% | |
| TGCACCTAACCTATATATGT+CGG | - | chr2_2:3233971-3233990 | Msa0231030:intron | 35.0% | |
| !! | CAATGATGGATGAAAAGTTG+CGG | - | chr2_2:3234059-3234078 | Msa0231030:intron | 35.0% |
| AAATAGCTCAAACACATGAG+AGG | - | chr2_2:3234093-3234112 | Msa0231030:intron | 35.0% | |
| !! | GTGTTCGAGCTATTTTACAT+GGG | + | chr2_2:3234201-3234220 | None:intergenic | 35.0% |
| !! | TGTGTTCGAGCTATTTTACA+TGG | + | chr2_2:3234202-3234221 | None:intergenic | 35.0% |
| AGTCTGATAATTGCAGATAG+AGG | - | chr2_2:3234161-3234180 | Msa0231030:intron | 35.0% | |
| ACAACAACAACAATGTCAAC+TGG | + | chr2_2:3234396-3234415 | None:intergenic | 35.0% | |
| !! | TTTTGGAGATCAGGAATCTA+TGG | + | chr2_2:3234561-3234580 | None:intergenic | 35.0% |
| !! | TCATGACTATTTTGGAGATC+AGG | + | chr2_2:3234570-3234589 | None:intergenic | 35.0% |
| CTTTGATGAGTACAATGATG+AGG | - | chr2_2:3234800-3234819 | Msa0231030:intron | 35.0% | |
| AAGGTTCATTCCTTCAAAGT+GGG | - | chr2_2:3235092-3235111 | Msa0231030:CDS | 35.0% | |
| !!! | TTTTTAGCTTCCCACTTTGA+AGG | + | chr2_2:3235105-3235124 | None:intergenic | 35.0% |
| TTCAAAGTGGGAAGCTAAAA+AGG | - | chr2_2:3235104-3235123 | Msa0231030:CDS | 35.0% | |
| TATGTTAGAGGAATTCGCAA+TGG | - | chr2_2:3235269-3235288 | Msa0231030:intron | 35.0% | |
| ! | AACTTTTGACAAGCCAAAGA+AGG | - | chr2_2:3235298-3235317 | Msa0231030:CDS | 35.0% |
| TAAGAATCATCCTCCTTCTT+TGG | + | chr2_2:3235314-3235333 | None:intergenic | 35.0% | |
| AGGATGATTCTTATCTCTTG+TGG | - | chr2_2:3235321-3235340 | Msa0231030:CDS | 35.0% | |
| GGATGATTCTTATCTCTTGT+GGG | - | chr2_2:3235322-3235341 | Msa0231030:CDS | 35.0% | |
| !! | CAAAGGTACCGAAAAAGAAA+AGG | + | chr2_2:3235462-3235481 | None:intergenic | 35.0% |
| GAGGATTATATGACTCATCA+TGG | + | chr2_2:3235514-3235533 | None:intergenic | 35.0% | |
| ! | GTTGGAATATACTCTAAAGG+AGG | + | chr2_2:3235533-3235552 | None:intergenic | 35.0% |
| ! | TGGGTTGGAATATACTCTAA+AGG | + | chr2_2:3235536-3235555 | None:intergenic | 35.0% |
| GAATTAATCTCTTCTTGGGT+TGG | + | chr2_2:3235551-3235570 | None:intergenic | 35.0% | |
| TTTGTGGGATAAATTTAGGG+CGG | + | chr2_2:3235598-3235617 | None:intergenic | 35.0% | |
| TCATAGCATTGTCATATGCA+GGG | + | chr2_2:3235718-3235737 | None:intergenic | 35.0% | |
| TTCATAGCATTGTCATATGC+AGG | + | chr2_2:3235719-3235738 | None:intergenic | 35.0% | |
| TGCATATGACAATGCTATGA+AGG | - | chr2_2:3235718-3235737 | Msa0231030:intron | 35.0% | |
| !! | AGCTTTGGCTTTAAAGATTC+AGG | + | chr2_2:3235969-3235988 | None:intergenic | 35.0% |
| GCCAAAGCTTCCAAATAAAA+AGG | - | chr2_2:3235980-3235999 | Msa0231030:intron | 35.0% | |
| ATATAGCATGTTATGGGGTA+AGG | + | chr2_2:3236014-3236033 | None:intergenic | 35.0% | |
| ATCGAATATAAAGGCCATGA+AGG | - | chr2_2:3236032-3236051 | Msa0231030:CDS | 35.0% | |
| ! | TTTTGTGAAGGTTCAAGTGA+TGG | - | chr2_2:3236177-3236196 | Msa0231030:intron | 35.0% |
| GATGTACTTCTGTTAAACAC+TGG | - | chr2_2:3236451-3236470 | Msa0231030:intron | 35.0% | |
| AGAAGAACAGCAAAGGATTA+AGG | - | chr2_2:3236486-3236505 | Msa0231030:intron | 35.0% | |
| ATAAACATCGATCCAGAAGA+AGG | - | chr2_2:3236587-3236606 | Msa0231030:CDS | 35.0% | |
| GTTGGGGTTATATGTTAACA+TGG | + | chr2_2:3236632-3236651 | None:intergenic | 35.0% | |
| AACACGATGGTATAAGGTTA+AGG | - | chr2_2:3236763-3236782 | Msa0231030:intron | 35.0% | |
| !! | ACTTGTCTCCATTTCTAGTT+AGG | - | chr2_2:3236801-3236820 | Msa0231030:intron | 35.0% |
| ! | AGAATGTTACTTCTGTGGAA+TGG | - | chr2_2:3236883-3236902 | Msa0231030:intron | 35.0% |
| TTGAAAAGTAGTCACCTTTC+CGG | + | chr2_2:3236911-3236930 | None:intergenic | 35.0% | |
| AGACATAAAGACTACTACTG+AGG | + | chr2_2:3237104-3237123 | None:intergenic | 35.0% | |
| CTAACAGCTCACTAGATAAA+TGG | + | chr2_2:3237172-3237191 | None:intergenic | 35.0% | |
| AGATCTTACATGAAATGAGG+GGG | + | chr2_2:3237207-3237226 | None:intergenic | 35.0% | |
| CAGATCTTACATGAAATGAG+GGG | + | chr2_2:3237208-3237227 | None:intergenic | 35.0% | |
| GCAGATCTTACATGAAATGA+GGG | + | chr2_2:3237209-3237228 | None:intergenic | 35.0% | |
| AGCAGATCTTACATGAAATG+AGG | + | chr2_2:3237210-3237229 | None:intergenic | 35.0% | |
| ATAAAGAAGATGGAACGAGA+TGG | + | chr2_2:3237507-3237526 | None:intergenic | 35.0% | |
| TAATAACAATACCTCCAGGA+TGG | + | chr2_2:3237626-3237645 | None:intergenic | 35.0% | |
| ! | TCATTTGCATTGATAGCACA+TGG | + | chr2_2:3237918-3237937 | None:intergenic | 35.0% |
| AGGTGACAGTTGTGAAATTA+AGG | + | chr2_2:3237995-3238014 | None:intergenic | 35.0% | |
| TTCAAAGAATAGTGTTTCCC+GGG | + | chr2_2:3238548-3238567 | None:intergenic | 35.0% | |
| ACAGCTCATTATTTAGGTAC+TGG | + | chr2_2:3238640-3238659 | None:intergenic | 35.0% | |
| !! | TAACAAGTTGATGTCATTGC+AGG | - | chr2_2:3238734-3238753 | Msa0231030:intron | 35.0% |
| ! | TGCACTGCATATGTTTTTCA+CGG | - | chr2_2:3238829-3238848 | Msa0231030:intron | 35.0% |
| ! | TGCATATGTTTTTCACGGAA+TGG | - | chr2_2:3238834-3238853 | Msa0231030:intron | 35.0% |
| ! | TGTTCCTTTGGAAATTCTAC+GGG | - | chr2_2:3238888-3238907 | Msa0231030:intron | 35.0% |
| GAAGTCAATATCATGGTTTG+GGG | - | chr2_2:3239020-3239039 | Msa0231030:intron | 35.0% | |
| CCACTGTTATCCCAAATTTA+GGG | - | chr2_2:3239334-3239353 | Msa0231030:intron | 35.0% | |
| CACTGTTATCCCAAATTTAG+GGG | - | chr2_2:3239335-3239354 | Msa0231030:intron | 35.0% | |
| ! | ATAGTAAGCAGATTTTTGCC+GGG | + | chr2_2:3239466-3239485 | None:intergenic | 35.0% |
| ! | GTTTAAGACACAGGTTTGGT+TGG | + | chr2_2:3231827-3231846 | None:intergenic | 40.0% |
| AAGAAGAAGAAGGTGAGAGA+GGG | + | chr2_2:3231849-3231868 | None:intergenic | 40.0% | |
| TAATCATGATCAGATGGAGG+CGG | + | chr2_2:3231945-3231964 | None:intergenic | 40.0% | |
| GGAAACTTCAACACTGTCAT+CGG | + | chr2_2:3231985-3232004 | None:intergenic | 40.0% | |
| TTCGGAAATGGAATCGTAGT+CGG | + | chr2_2:3232006-3232025 | None:intergenic | 40.0% | |
| TTCCATTTCCGAAGATGAAG+AGG | - | chr2_2:3232013-3232032 | Msa0231030:three_prime_UTR | 40.0% | |
| TACCTCTTCATCTTCGGAAA+TGG | + | chr2_2:3232018-3232037 | None:intergenic | 40.0% | |
| GGATGATACCTCTTCATCTT+CGG | + | chr2_2:3232024-3232043 | None:intergenic | 40.0% | |
| ! | TCTTCTGTTCTGTTTGTTGC+AGG | - | chr2_2:3232095-3232114 | Msa0231030:three_prime_UTR | 40.0% |
| !! | ATAAGTTTTGTGAGACGGCT+TGG | + | chr2_2:3232550-3232569 | None:intergenic | 40.0% |
| ACTCATGGGCCTGTTTAAAT+TGG | + | chr2_2:3232586-3232605 | None:intergenic | 40.0% | |
| CATAATAGCAGAGGACTGTT+TGG | + | chr2_2:3232780-3232799 | None:intergenic | 40.0% | |
| !! | ATTGTAGGACGTTGATGACT+CGG | - | chr2_2:3232866-3232885 | Msa0231030:intron | 40.0% |
| GGACCTGAATTTGATTACTC+TGG | - | chr2_2:3233021-3233040 | Msa0231030:intron | 40.0% | |
| GAGCCAGAGTAATCAAATTC+AGG | + | chr2_2:3233027-3233046 | None:intergenic | 40.0% | |
| CATCCTCATACCACTTCAAA+GGG | + | chr2_2:3233093-3233112 | None:intergenic | 40.0% | |
| TCATCCTCATACCACTTCAA+AGG | + | chr2_2:3233094-3233113 | None:intergenic | 40.0% | |
| TATGAGGATGAACCCCATAT+TGG | - | chr2_2:3233103-3233122 | Msa0231030:intron | 40.0% | |
| ATGTTAATATGTGGGGACTG+GGG | + | chr2_2:3233662-3233681 | None:intergenic | 40.0% | |
| CATGTTAATATGTGGGGACT+GGG | + | chr2_2:3233663-3233682 | None:intergenic | 40.0% | |
| CTCACTGACATATATAGGCT+AGG | + | chr2_2:3233922-3233941 | None:intergenic | 40.0% | |
| CCTCACTCACTGACATATAT+AGG | + | chr2_2:3233927-3233946 | None:intergenic | 40.0% | |
| CCTATATATGTCAGTGAGTG+AGG | - | chr2_2:3233924-3233943 | Msa0231030:CDS | 40.0% | |
| CTCACCGACATATATAGGTT+AGG | + | chr2_2:3233978-3233997 | None:intergenic | 40.0% | |
| TCTCACTCACCGACATATAT+AGG | + | chr2_2:3233983-3234002 | None:intergenic | 40.0% | |
| CATGAGAGGAGGATCAATAT+AGG | - | chr2_2:3234107-3234126 | Msa0231030:intron | 40.0% | |
| AAATAGCTCGAACACATGAG+AGG | - | chr2_2:3234206-3234225 | Msa0231030:intron | 40.0% | |
| CATGAGAGGAGGTTCAATAT+AGG | - | chr2_2:3234220-3234239 | Msa0231030:intron | 40.0% | |
| CTAACATGGGTCTTCTTTCT+TGG | + | chr2_2:3234304-3234323 | None:intergenic | 40.0% | |
| CAAGAAAGAAGACCCATGTT+AGG | - | chr2_2:3234302-3234321 | Msa0231030:intron | 40.0% | |
| GATCAGGAATCTATGGTTGA+TGG | + | chr2_2:3234554-3234573 | None:intergenic | 40.0% | |
| TTCTTGATCATTTAGGCGGA+AGG | - | chr2_2:3234776-3234795 | Msa0231030:intron | 40.0% | |
| TGAGTACAATGATGAGGAAG+TGG | - | chr2_2:3234806-3234825 | Msa0231030:intron | 40.0% | |
| GCGCAAACTAATGCAGAATA+AGG | - | chr2_2:3234857-3234876 | Msa0231030:CDS | 40.0% | |
| TGTGGATCAAAGTCAGAATG+TGG | + | chr2_2:3234885-3234904 | None:intergenic | 40.0% | |
| TTCTGACTTTGATCCACATC+CGG | - | chr2_2:3234887-3234906 | Msa0231030:CDS | 40.0% | |
| AAGTAAATACAGACCGGATG+TGG | + | chr2_2:3234903-3234922 | None:intergenic | 40.0% | |
| ATGTGCAGGATTATGTTGAG+TGG | - | chr2_2:3235016-3235035 | Msa0231030:intron | 40.0% | |
| ! | AATGAACCTTCGTTTGGGTT+CGG | + | chr2_2:3235082-3235101 | None:intergenic | 40.0% |
| GAAGGAATGAACCTTCGTTT+GGG | + | chr2_2:3235087-3235106 | None:intergenic | 40.0% | |
| TGAAGGAATGAACCTTCGTT+TGG | + | chr2_2:3235088-3235107 | None:intergenic | 40.0% | |
| GAAGGTTCATTCCTTCAAAG+TGG | - | chr2_2:3235091-3235110 | Msa0231030:CDS | 40.0% | |
| CGATTAGGTACAGATTATCC+AGG | - | chr2_2:3235171-3235190 | Msa0231030:CDS | 40.0% | |
| ! | TTTTGACAAGCCAAAGAAGG+AGG | - | chr2_2:3235301-3235320 | Msa0231030:CDS | 40.0% |
| ATACCAGGAAGTTTCTGCTT+TGG | + | chr2_2:3235401-3235420 | None:intergenic | 40.0% | |
| TTCAAGTCACGTGTAATACC+AGG | + | chr2_2:3235416-3235435 | None:intergenic | 40.0% | |
| ATCATGGCCTGAGAAGTAAA+AGG | + | chr2_2:3235498-3235517 | None:intergenic | 40.0% | |
| GCCCTAAATTTATCCCACAA+AGG | - | chr2_2:3235597-3235616 | Msa0231030:intron | 40.0% | |
| ! | TGAAAGCACAGTACCTTTGT+GGG | + | chr2_2:3235613-3235632 | None:intergenic | 40.0% |
| ! | ATGAAAGCACAGTACCTTTG+TGG | + | chr2_2:3235614-3235633 | None:intergenic | 40.0% |
| !! | ACAAAGGTACTGTGCTTTCA+TGG | - | chr2_2:3235613-3235632 | Msa0231030:CDS | 40.0% |
| CAATTGCATAAGAGAGACAG+AGG | + | chr2_2:3235651-3235670 | None:intergenic | 40.0% | |
| GCTTCTCATAGATGTAAACC+TGG | + | chr2_2:3235693-3235712 | None:intergenic | 40.0% | |
| !!! | GGAAAGTTTTGAACGCTGTT+TGG | - | chr2_2:3235739-3235758 | Msa0231030:intron | 40.0% |
| GTGCATGTGTGTTTCATATC+TGG | - | chr2_2:3235893-3235912 | Msa0231030:intron | 40.0% | |
| TTGATGTAACTGCACCTTCA+TGG | + | chr2_2:3236049-3236068 | None:intergenic | 40.0% | |
| TGGTTTCGATTAAACAGTGG+AGG | - | chr2_2:3236132-3236151 | Msa0231030:intron | 40.0% | |
| TTCGATTAAACAGTGGAGGT+CGG | - | chr2_2:3236136-3236155 | Msa0231030:intron | 40.0% | |
| ! | AAGCTGTGAACTGTGTTACT+TGG | - | chr2_2:3236259-3236278 | Msa0231030:intron | 40.0% |
| AGTACATCTTGTCCCCTAAA+TGG | + | chr2_2:3236439-3236458 | None:intergenic | 40.0% | |
| ! | ACTTCTGTTAAACACTGGCT+TGG | - | chr2_2:3236456-3236475 | Msa0231030:intron | 40.0% |
| !! | CTTCTGTTAAACACTGGCTT+GGG | - | chr2_2:3236457-3236476 | Msa0231030:intron | 40.0% |
| GTGATGAAGAAGAACAGCAA+AGG | - | chr2_2:3236479-3236498 | Msa0231030:intron | 40.0% | |
| CTGCATGAATACATCCACTA+AGG | + | chr2_2:3236865-3236884 | None:intergenic | 40.0% | |
| ! | CATGCAGAATGTTACTTCTG+TGG | - | chr2_2:3236878-3236897 | Msa0231030:intron | 40.0% |
| CAACAATAAAGGATATCCGC+TGG | + | chr2_2:3236942-3236961 | None:intergenic | 40.0% | |
| GCAAGTCCATGTAACTTGAA+AGG | + | chr2_2:3237465-3237484 | None:intergenic | 40.0% | |
| TCTATACACACATTCCATGC+AGG | - | chr2_2:3237718-3237737 | Msa0231030:intron | 40.0% | |
| TTAATTGTGGGGAGCAAAGA+AGG | - | chr2_2:3237748-3237767 | Msa0231030:intron | 40.0% | |
| ! | GCAAAGAAGGAAAGCTTTGT+TGG | - | chr2_2:3237761-3237780 | Msa0231030:intron | 40.0% |
| TTATCGCCATTGCAGAGTTT+AGG | - | chr2_2:3238137-3238156 | Msa0231030:intron | 40.0% | |
| TATCGCCATTGCAGAGTTTA+GGG | - | chr2_2:3238138-3238157 | Msa0231030:intron | 40.0% | |
| TTATCGCCATTGCAGAGTTT+AGG | - | chr2_2:3238137-3238156 | Msa0231030:intron | 40.0% | |
| TATCGCCATTGCAGAGTTTA+GGG | - | chr2_2:3238138-3238157 | Msa0231030:intron | 40.0% | |
| ! | AGTCAAACTTAAGGCTTGCT+AGG | + | chr2_2:3238426-3238445 | None:intergenic | 40.0% |
| ! | GTTCCTTTGGAAATTCTACG+GGG | - | chr2_2:3238889-3238908 | Msa0231030:intron | 40.0% |
| CTCTCCCATTTGAATTTGCA+TGG | + | chr2_2:3238915-3238934 | None:intergenic | 40.0% | |
| CATGCAAATTCAAATGGGAG+AGG | - | chr2_2:3238913-3238932 | Msa0231030:intron | 40.0% | |
| AACCCTGGTTATTTACAGCT+GGG | - | chr2_2:3239171-3239190 | Msa0231030:CDS | 40.0% | |
| GCCACTGTTATCCCAAATTT+AGG | - | chr2_2:3239333-3239352 | Msa0231030:intron | 40.0% | |
| ! | CCCTAAATTTGGGATAACAG+TGG | + | chr2_2:3239337-3239356 | None:intergenic | 40.0% |
| TTATCCCAAATTTAGGGGTG+AGG | - | chr2_2:3239340-3239359 | Msa0231030:intron | 40.0% | |
| TATCCCAAATTTAGGGGTGA+GGG | - | chr2_2:3239341-3239360 | Msa0231030:intron | 40.0% | |
| !! | TACCAGGAATTTGTTGTACC+CGG | - | chr2_2:3239445-3239464 | Msa0231030:CDS | 40.0% |
| ! | TCCGATGGATGTTTTCTTTC+TGG | - | chr2_2:3239548-3239567 | Msa0231030:five_prime_UTR | 40.0% |
| CCCAGAAAGAAAACATCCAT+CGG | + | chr2_2:3239552-3239571 | None:intergenic | 40.0% | |
| ! | CCGATGGATGTTTTCTTTCT+GGG | - | chr2_2:3239549-3239568 | Msa0231030:five_prime_UTR | 40.0% |
| ! | GAGGGTTTAAGACACAGGTT+TGG | + | chr2_2:3231831-3231850 | None:intergenic | 45.0% |
| ! | TGAGAGAGGGTTTAAGACAC+AGG | + | chr2_2:3231836-3231855 | None:intergenic | 45.0% |
| GAAGAAGAAGAAGGTGAGAG+AGG | + | chr2_2:3231850-3231869 | None:intergenic | 45.0% | |
| AGCCGAGATGAAGAAGAAAG+AGG | - | chr2_2:3231911-3231930 | Msa0231030:three_prime_UTR | 45.0% | |
| TTGGGAGTCAGAATTGTCGT+CGG | + | chr2_2:3232229-3232248 | None:intergenic | 45.0% | |
| GTCCAAACAGGCCGTAAATA+GGG | + | chr2_2:3232328-3232347 | None:intergenic | 45.0% | |
| TGTCCAAACAGGCCGTAAAT+AGG | + | chr2_2:3232329-3232348 | None:intergenic | 45.0% | |
| TGAAAGCTCCGATCTTCATC+AGG | - | chr2_2:3232899-3232918 | Msa0231030:intron | 45.0% | |
| TCCTCCTTCCTGATGAAGAT+CGG | + | chr2_2:3232910-3232929 | None:intergenic | 45.0% | |
| TGCTGAGAGTGATTCATCTG+AGG | - | chr2_2:3232932-3232951 | Msa0231030:intron | 45.0% | |
| GAGTGATTCATCTGAGGATG+AGG | - | chr2_2:3232938-3232957 | Msa0231030:intron | 45.0% | |
| !!! | TCTGGCTCTCCTTTTTCCAT+AGG | - | chr2_2:3233039-3233058 | Msa0231030:intron | 45.0% |
| TCCTCGAAATACCATTGGAG+AGG | - | chr2_2:3233066-3233085 | Msa0231030:intron | 45.0% | |
| ACCTCTCCAATGGTATTTCG+AGG | + | chr2_2:3233070-3233089 | None:intergenic | 45.0% | |
| CTCACTGACACATATAGGCT+AGG | - | chr2_2:3233284-3233303 | Msa0231030:intron | 45.0% | |
| CCATGTTAATATGTGGGGAC+TGG | + | chr2_2:3233664-3233683 | None:intergenic | 45.0% | |
| CCAGTCCCCACATATTAACA+TGG | - | chr2_2:3233661-3233680 | Msa0231030:intron | 45.0% | |
| GCAGTACTTGTAGGTCAGTT+AGG | - | chr2_2:3233856-3233875 | Msa0231030:CDS | 45.0% | |
| TAGCTCAAACACATGAGAGG+AGG | - | chr2_2:3234096-3234115 | Msa0231030:intron | 45.0% | |
| TGCGTTAGACAATGGATGCT+TGG | + | chr2_2:3235058-3235077 | None:intergenic | 45.0% | |
| ! | ATGAACCTTCGTTTGGGTTC+GGG | + | chr2_2:3235081-3235100 | None:intergenic | 45.0% |
| CAGGTTGTGCAGTATGTTAG+AGG | - | chr2_2:3235257-3235276 | Msa0231030:intron | 45.0% | |
| CTCTTGTGGGAAGATGATTC+TGG | - | chr2_2:3235335-3235354 | Msa0231030:CDS | 45.0% | |
| ! | CACGTTTTCTTCGAACTCGA+GGG | + | chr2_2:3235778-3235797 | None:intergenic | 45.0% |
| ! | ACACGTTTTCTTCGAACTCG+AGG | + | chr2_2:3235779-3235798 | None:intergenic | 45.0% |
| GGTCGGTATCCTCACTTAAT+TGG | - | chr2_2:3236153-3236172 | Msa0231030:intron | 45.0% | |
| AAACCAGACTTACGCAGAGA+CGG | + | chr2_2:3236313-3236332 | None:intergenic | 45.0% | |
| !! | ATCCAGAAGAAGGCTCTAAG+AGG | - | chr2_2:3236597-3236616 | Msa0231030:intron | 45.0% |
| TCTTTAAGCCAGCGTACACT+AGG | + | chr2_2:3236738-3236757 | None:intergenic | 45.0% | |
| TTACTTCTGTGGAATGGCAC+CGG | - | chr2_2:3236889-3236908 | Msa0231030:intron | 45.0% | |
| ! | CTTTTCAACAGTGATGCCAG+CGG | - | chr2_2:3236923-3236942 | Msa0231030:intron | 45.0% |
| GTGAGAGTTTCTTGGACAAC+TGG | + | chr2_2:3237434-3237453 | None:intergenic | 45.0% | |
| AGAAGATGGAACGAGATGGA+TGG | + | chr2_2:3237503-3237522 | None:intergenic | 45.0% | |
| ! | TTAATCTGCATAGGGCACTC+TGG | + | chr2_2:3237887-3237906 | None:intergenic | 45.0% |
| ATCGCCATTGCAGAGTTTAG+GGG | - | chr2_2:3238139-3238158 | Msa0231030:intron | 45.0% | |
| ATCGCCATTGCAGAGTTTAG+GGG | - | chr2_2:3238139-3238158 | Msa0231030:intron | 45.0% | |
| TTGTGTGACCTTTCGCTGAA+AGG | + | chr2_2:3238306-3238325 | None:intergenic | 45.0% | |
| TTTAGACTGTACCCATGTCC+CGG | - | chr2_2:3238527-3238546 | Msa0231030:intron | 45.0% | |
| AATAGTGTTTCCCGGGACAT+GGG | + | chr2_2:3238541-3238560 | None:intergenic | 45.0% | |
| AGCATGCTTTGCCTGTAACT+TGG | - | chr2_2:3238605-3238624 | Msa0231030:intron | 45.0% | |
| GGAGAAGTTCACCAAGTTAC+AGG | + | chr2_2:3238619-3238638 | None:intergenic | 45.0% | |
| TCTGAGCACGAAGCAAACAA+GGG | + | chr2_2:3238805-3238824 | None:intergenic | 45.0% | |
| ATCTGAGCACGAAGCAAACA+AGG | + | chr2_2:3238806-3238825 | None:intergenic | 45.0% | |
| GGGGCCATGCAAATTCAAAT+GGG | - | chr2_2:3238908-3238927 | Msa0231030:intron | 45.0% | |
| TAAATAACCAGGGTTGCCTG+GGG | + | chr2_2:3239166-3239185 | None:intergenic | 45.0% | |
| GTAAATAACCAGGGTTGCCT+GGG | + | chr2_2:3239167-3239186 | None:intergenic | 45.0% | |
| TGTAAATAACCAGGGTTGCC+TGG | + | chr2_2:3239168-3239187 | None:intergenic | 45.0% | |
| CAACCCTGGTTATTTACAGC+TGG | - | chr2_2:3239170-3239189 | Msa0231030:CDS | 45.0% | |
| ACCCTGGTTATTTACAGCTG+GGG | - | chr2_2:3239172-3239191 | Msa0231030:CDS | 45.0% | |
| ACTCCCTCACCCCTAAATTT+GGG | + | chr2_2:3239347-3239366 | None:intergenic | 45.0% | |
| AACTCCCTCACCCCTAAATT+TGG | + | chr2_2:3239348-3239367 | None:intergenic | 45.0% | |
| ! | TCTTTCTGGGAAATGTGACG+TGG | - | chr2_2:3239562-3239581 | Msa0231030:five_prime_UTR | 45.0% |
| !! | AATGTGACGTGGAGTTGGTA+TGG | - | chr2_2:3239573-3239592 | Msa0231030:five_prime_UTR | 45.0% |
| TGAATGAGTAAGGGTGGGTG+CGG | - | chr2_2:3231765-3231784 | Msa0231030:three_prime_UTR | 50.0% | |
| CAATTCTGACTCCCAAGACG+AGG | - | chr2_2:3232233-3232252 | Msa0231030:CDS | 50.0% | |
| CACCCTATTTACGGCCTGTT+TGG | - | chr2_2:3232323-3232342 | Msa0231030:intron | 50.0% | |
| !! | TAGGACGTTGATGACTCGGA+AGG | - | chr2_2:3232870-3232889 | Msa0231030:intron | 50.0% |
| AGCTCCGATCTTCATCAGGA+AGG | - | chr2_2:3232903-3232922 | Msa0231030:intron | 50.0% | |
| TCCGATCTTCATCAGGAAGG+AGG | - | chr2_2:3232906-3232925 | Msa0231030:intron | 50.0% | |
| GATCTTCATCAGGAAGGAGG+AGG | - | chr2_2:3232909-3232928 | Msa0231030:intron | 50.0% | |
| ! | GGCTCTCCTTTTTCCATAGG+TGG | - | chr2_2:3233042-3233061 | Msa0231030:intron | 50.0% |
| GAGGAGCCACCTATGGAAAA+AGG | + | chr2_2:3233051-3233070 | None:intergenic | 50.0% | |
| GTATTTCGAGGAGCCACCTA+TGG | + | chr2_2:3233058-3233077 | None:intergenic | 50.0% | |
| GTGGCTCCTCGAAATACCAT+TGG | - | chr2_2:3233061-3233080 | Msa0231030:intron | 50.0% | |
| CTTCAAAGGGACCTCTCCAA+TGG | + | chr2_2:3233080-3233099 | None:intergenic | 50.0% | |
| ! | TTGGAGAGGTCCCTTTGAAG+TGG | - | chr2_2:3233080-3233099 | Msa0231030:intron | 50.0% |
| !! | GGTCCCTTTGAAGTGGTATG+AGG | - | chr2_2:3233087-3233106 | Msa0231030:intron | 50.0% |
| AAACGGGCAGAACAAAGCAC+AGG | + | chr2_2:3233606-3233625 | None:intergenic | 50.0% | |
| TAGCTCGAACACATGAGAGG+AGG | - | chr2_2:3234209-3234228 | Msa0231030:intron | 50.0% | |
| ! | GGAAGTTTCTGCTTTGGTGC+AGG | + | chr2_2:3235395-3235414 | None:intergenic | 50.0% |
| GCACCAAAGCAGAAACTTCC+TGG | - | chr2_2:3235395-3235414 | Msa0231030:CDS | 50.0% | |
| CTATTGAAGCTTCAGGGCAG+TGG | - | chr2_2:3236072-3236091 | Msa0231030:CDS | 50.0% | |
| TGATGGAACTGTCCGTGTCT+GGG | - | chr2_2:3236194-3236213 | Msa0231030:intron | 50.0% | |
| CAGTTTCAACCTCCCAGACA+CGG | + | chr2_2:3236209-3236228 | None:intergenic | 50.0% | |
| ! | TGGCAGATGTCTGAGACAGT+GGG | - | chr2_2:3236227-3236246 | Msa0231030:intron | 50.0% |
| ! | TGTCTGAGACAGTGGGAGAT+TGG | - | chr2_2:3236234-3236253 | Msa0231030:intron | 50.0% |
| CCAGTCTCATCTGATGCTTC+TGG | + | chr2_2:3236532-3236551 | None:intergenic | 50.0% | |
| !! | CCAGAAGCATCAGATGAGAC+TGG | - | chr2_2:3236529-3236548 | Msa0231030:CDS | 50.0% |
| GACCTCTTAGAGCCTTCTTC+TGG | + | chr2_2:3236602-3236621 | None:intergenic | 50.0% | |
| CTGCAAACACAAGCGTGGTT+AGG | + | chr2_2:3236704-3236723 | None:intergenic | 50.0% | |
| CTAACCACGCTTGTGTTTGC+AGG | - | chr2_2:3236702-3236721 | Msa0231030:intron | 50.0% | |
| AAATGAGGGGGATCGCATGA+CGG | + | chr2_2:3237195-3237214 | None:intergenic | 50.0% | |
| GATGGAACGAGATGGATGGA+AGG | + | chr2_2:3237499-3237518 | None:intergenic | 50.0% | |
| !! | TGACGAGGCTTCTTTGAGAC+CGG | + | chr2_2:3237595-3237614 | None:intergenic | 50.0% |
| !! | AGGATGGACTGCAATTGACG+AGG | + | chr2_2:3237610-3237629 | None:intergenic | 50.0% |
| TCGTCAATTGCAGTCCATCC+TGG | - | chr2_2:3237609-3237628 | Msa0231030:intron | 50.0% | |
| TCAATTGCAGTCCATCCTGG+AGG | - | chr2_2:3237612-3237631 | Msa0231030:intron | 50.0% | |
| CCATTGCAGAGTTTAGGGGA+GGG | - | chr2_2:3238143-3238162 | Msa0231030:intron | 50.0% | |
| CCATTGCAGAGTTTAGGGGA+GGG | - | chr2_2:3238143-3238162 | Msa0231030:intron | 50.0% | |
| ACGTGTGACCTTTCAGCGAA+AGG | - | chr2_2:3238295-3238314 | Msa0231030:CDS | 50.0% | |
| TTAGACTGTACCCATGTCCC+GGG | - | chr2_2:3238528-3238547 | Msa0231030:intron | 50.0% | |
| GAATAGTGTTTCCCGGGACA+TGG | + | chr2_2:3238542-3238561 | None:intergenic | 50.0% | |
| ACAGGCAAAGCATGCTCACT+TGG | + | chr2_2:3238601-3238620 | None:intergenic | 50.0% | |
| TGGCCCCGTAGAATTTCCAA+AGG | + | chr2_2:3238895-3238914 | None:intergenic | 50.0% | |
| CGGGGCCATGCAAATTCAAA+TGG | - | chr2_2:3238907-3238926 | Msa0231030:intron | 50.0% | |
| GCCCCAGCTGTAAATAACCA+GGG | + | chr2_2:3239176-3239195 | None:intergenic | 50.0% | |
| AGCCCCAGCTGTAAATAACC+AGG | + | chr2_2:3239177-3239196 | None:intergenic | 50.0% | |
| TGCCGGGTACAACAAATTCC+TGG | + | chr2_2:3239450-3239469 | None:intergenic | 50.0% | |
| TGGGAAATGTGACGTGGAGT+TGG | - | chr2_2:3239568-3239587 | Msa0231030:five_prime_UTR | 50.0% | |
| GAATGAGTAAGGGTGGGTGC+GGG | - | chr2_2:3231766-3231785 | Msa0231030:three_prime_UTR | 55.0% | |
| TCATGATCAGATGGAGGCGG+CGG | + | chr2_2:3231942-3231961 | None:intergenic | 55.0% | |
| GTCATCGGAGTCGTCGTCAT+CGG | + | chr2_2:3231970-3231989 | None:intergenic | 55.0% | |
| TTCTGACTCCCAAGACGAGG+AGG | - | chr2_2:3232236-3232255 | Msa0231030:CDS | 55.0% | |
| GAAGCTGACCTCCTCGTCTT+GGG | + | chr2_2:3232247-3232266 | None:intergenic | 55.0% | |
| TGAAGCTGACCTCCTCGTCT+TGG | + | chr2_2:3232248-3232267 | None:intergenic | 55.0% | |
| !! | GACGTTGATGACTCGGAAGG+TGG | - | chr2_2:3232873-3232892 | Msa0231030:intron | 55.0% |
| GGTTCGGGTGCGTTAGACAA+TGG | + | chr2_2:3235066-3235085 | None:intergenic | 55.0% | |
| TGAAGCTTCAGGGCAGTGGA+TGG | - | chr2_2:3236076-3236095 | Msa0231030:CDS | 55.0% | |
| ! | GTGATGGAACTGTCCGTGTC+TGG | - | chr2_2:3236193-3236212 | Msa0231030:intron | 55.0% |
| CGTGTCTGGGAGGTTGAAAC+TGG | - | chr2_2:3236207-3236226 | Msa0231030:intron | 55.0% | |
| ! | CTGGCAGATGTCTGAGACAG+TGG | - | chr2_2:3236226-3236245 | Msa0231030:intron | 55.0% |
| CTTGCCTGCAAACACAAGCG+TGG | + | chr2_2:3236709-3236728 | None:intergenic | 55.0% | |
| ! | TCTGTGGAATGGCACCGGAA+AGG | - | chr2_2:3236894-3236913 | Msa0231030:intron | 55.0% |
| GCCATTGCAGAGTTTAGGGG+AGG | - | chr2_2:3238142-3238161 | Msa0231030:intron | 55.0% | |
| CCCTCCCCTAAACTCTGCAA+TGG | + | chr2_2:3238146-3238165 | None:intergenic | 55.0% | |
| GCCATTGCAGAGTTTAGGGG+AGG | - | chr2_2:3238142-3238161 | Msa0231030:intron | 55.0% | |
| CCCTCCCCTAAACTCTGCAA+TGG | + | chr2_2:3238146-3238165 | None:intergenic | 55.0% | |
| TGGACTGCAAGTTTCACCCC+AGG | - | chr2_2:3239147-3239166 | Msa0231030:CDS | 55.0% | |
| ACGCACCCGAACCCAAACGA+AGG | - | chr2_2:3235073-3235092 | Msa0231030:intron | 60.0% | |
| TCAGGGCAGTGGATGGCTTC+AGG | - | chr2_2:3236083-3236102 | Msa0231030:CDS | 60.0% | |
| TGGAACTGTCCGTGTCTGGG+AGG | - | chr2_2:3236197-3236216 | Msa0231030:intron | 60.0% | |
| TGGCCGTCTCTGCGTAAGTC+TGG | - | chr2_2:3236307-3236326 | Msa0231030:CDS | 60.0% | |
| AGTTTCACCCCAGGCAACCC+TGG | - | chr2_2:3239156-3239175 | Msa0231030:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 3231732 | 3239669 | 3231732 | ID=Msa0231030;Name=Msa0231030 |
| chr2_2 | mRNA | 3231732 | 3239669 | 3231732 | ID=Msa0231030-mRNA-1;Parent=Msa0231030;Name=Msa0231030-mRNA-1;_AED=0.11;_eAED=0.11;_QI=156|0.83|0.84|0.94|1|1|19|463|735 |
| chr2_2 | exon | 3231732 | 3232260 | 3231732 | ID=Msa0231030-mRNA-1:exon:1225;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3232343 | 3232395 | 3232343 | ID=Msa0231030-mRNA-1:exon:1224;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3232467 | 3232645 | 3232467 | ID=Msa0231030-mRNA-1:exon:1223;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3233577 | 3233661 | 3233577 | ID=Msa0231030-mRNA-1:exon:1222;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3233768 | 3233980 | 3233768 | ID=Msa0231030-mRNA-1:exon:1221;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3234486 | 3234516 | 3234486 | ID=Msa0231030-mRNA-1:exon:1220;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3234607 | 3234677 | 3234607 | ID=Msa0231030-mRNA-1:exon:1219;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3234851 | 3234957 | 3234851 | ID=Msa0231030-mRNA-1:exon:1218;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3235082 | 3235214 | 3235082 | ID=Msa0231030-mRNA-1:exon:1217;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3235297 | 3235447 | 3235297 | ID=Msa0231030-mRNA-1:exon:1216;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3235605 | 3235707 | 3235605 | ID=Msa0231030-mRNA-1:exon:1215;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3235783 | 3235891 | 3235783 | ID=Msa0231030-mRNA-1:exon:1214;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3235985 | 3236141 | 3235985 | ID=Msa0231030-mRNA-1:exon:1213;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3236276 | 3236377 | 3236276 | ID=Msa0231030-mRNA-1:exon:1212;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3236493 | 3236610 | 3236493 | ID=Msa0231030-mRNA-1:exon:1211;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3238186 | 3238340 | 3238186 | ID=Msa0231030-mRNA-1:exon:1210;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3238442 | 3238528 | 3238442 | ID=Msa0231030-mRNA-1:exon:1209;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3239144 | 3239284 | 3239144 | ID=Msa0231030-mRNA-1:exon:1208;Parent=Msa0231030-mRNA-1 |
| chr2_2 | exon | 3239367 | 3239669 | 3239367 | ID=Msa0231030-mRNA-1:exon:1207;Parent=Msa0231030-mRNA-1 |
| chr2_2 | five_prime_UTR | 3239514 | 3239669 | 3239514 | ID=Msa0231030-mRNA-1:five_prime_utr;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3239367 | 3239513 | 3239367 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3239144 | 3239284 | 3239144 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3238442 | 3238528 | 3238442 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3238186 | 3238340 | 3238186 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3236493 | 3236610 | 3236493 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3236276 | 3236377 | 3236276 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3235985 | 3236141 | 3235985 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3235783 | 3235891 | 3235783 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3235605 | 3235707 | 3235605 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3235297 | 3235447 | 3235297 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3235082 | 3235214 | 3235082 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3234851 | 3234957 | 3234851 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3234607 | 3234677 | 3234607 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3234486 | 3234516 | 3234486 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3233768 | 3233980 | 3233768 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3233577 | 3233661 | 3233577 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3232467 | 3232645 | 3232467 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3232343 | 3232395 | 3232343 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | CDS | 3232195 | 3232260 | 3232195 | ID=Msa0231030-mRNA-1:cds;Parent=Msa0231030-mRNA-1 |
| chr2_2 | three_prime_UTR | 3231732 | 3232194 | 3231732 | ID=Msa0231030-mRNA-1:three_prime_utr;Parent=Msa0231030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
