AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0311090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311090 MtrunA17_Chr2g0279931 95.557 1283 29 3 1 1280 1 1258 0.0 2484
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311090 AT5G64420.1 56.505 1276 499 9 33 1279 57 1305 0.0 1282

Find 280 sgRNAs with CRISPR-Local

Find 509 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCCGCATCCTTTCATTAT+TGG 0.108234 2_4:+5974432 Msa0311090:CDS
CTACCCATTGGGATTGAATT+TGG 0.140626 2_4:-5968281 None:intergenic
TCTACAGACAGTTCCATTTA+TGG 0.143885 2_4:+5970649 Msa0311090:CDS
GCATTTGATGTGGGAGATTT+TGG 0.150780 2_4:-5971710 None:intergenic
TGCTGTATTTGGCTTTATTT+TGG 0.164794 2_4:+5975144 Msa0311090:CDS
AAATCCAAAAGGAAGAATTT+TGG 0.171453 2_4:-5974964 None:intergenic
TACATTATTTCAGTTTATTC+TGG 0.174410 2_4:-5975834 None:intergenic
AAAGGAAATAATGAAGTTTA+TGG 0.180478 2_4:+5971613 Msa0311090:CDS
GAAGCTTCAAAATTCATTTA+AGG 0.184972 2_4:+5975615 Msa0311090:three_prime_UTR
TAAACTCGTAGTAGATTTAT+TGG 0.186853 2_4:+5969806 Msa0311090:CDS
ATAAATCTACTACGAGTTTA+AGG 0.201598 2_4:-5969803 None:intergenic
TGGTAGTAGTTTGCCATAAA+TGG 0.204218 2_4:-5970662 None:intergenic
GTTTCATATTGGTGTGTTTA+AGG 0.207989 2_4:+5968556 Msa0311090:CDS
CCCGCATCTGGATGTCTTGC+AGG 0.208201 2_4:-5974112 None:intergenic
TTGCCCAAAATTCTTCCTTT+TGG 0.208711 2_4:+5974960 Msa0311090:CDS
TTGAGTTGGACGAGAAATTT+AGG 0.244796 2_4:+5971684 Msa0311090:CDS
CGGAGCTGGAAGTTCGGATT+TGG 0.249234 2_4:-5968471 None:intergenic
TGCCTTGAACCGATATAAAA+TGG 0.254681 2_4:+5974928 Msa0311090:CDS
AATGAAGTTTATGGCTGTTC+AGG 0.254880 2_4:+5971622 Msa0311090:CDS
ATTCCTTTGTTTGAAGAAAC+TGG 0.256200 2_4:+5975489 Msa0311090:CDS
TGGATTGGCCATGCTGTATT+TGG 0.268961 2_4:+5975133 Msa0311090:CDS
TTCCTTCAGTTTCTCTCTTC+CGG 0.279221 2_4:+5971879 Msa0311090:CDS
GAGATTCAAGTGTCGATAAT+TGG 0.285987 2_4:-5974826 None:intergenic
ACAGACGAAAATTCTGAAAT+AGG 0.294275 2_4:+5971461 Msa0311090:CDS
TCCAATTGTGGAACAGTATT+GGG 0.296061 2_4:-5970906 None:intergenic
CGTTGAGCCGCCTAATGATC+TGG 0.304974 2_4:+5971817 Msa0311090:CDS
TTGGTAGAGCTGAACGGATT+TGG 0.321158 2_4:-5970682 None:intergenic
AACTAGCATCAAAACCATTT+AGG 0.324731 2_4:+5974867 Msa0311090:CDS
TCCTGAGGCTCAAGCTGCTT+TGG 0.324924 2_4:+5975447 Msa0311090:CDS
AGCTGATTTCTTTGAGGGAT+TGG 0.334746 2_4:-5974906 None:intergenic
TTCTTAAACAATTGTCAGAT+TGG 0.335380 2_4:+5971222 Msa0311090:CDS
TTCGGATTTGGATTTGGATT+TGG 0.336489 2_4:-5968459 None:intergenic
TACCCATTGGGATTGAATTT+GGG 0.339506 2_4:-5968280 None:intergenic
TCTGAATCATCAGAATCTTC+AGG 0.341427 2_4:-5974292 None:intergenic
TACGGTAGAAAATGTGATTT+CGG 0.341452 2_4:-5975796 None:intergenic
CTGGTGCTATCGACAAAATC+AGG 0.343136 2_4:+5969769 Msa0311090:CDS
GCTCTTGCAGTGTGCGCGAC+AGG 0.343666 2_4:+5969719 Msa0311090:intron
CCTATTCGCATATGGTGCTT+TGG 0.344339 2_4:+5969967 Msa0311090:CDS
TCTTACTGTGTACTCACATT+TGG 0.348622 2_4:+5974685 Msa0311090:CDS
TCATCTGCACTTCCCGCATC+TGG 0.348902 2_4:-5974124 None:intergenic
CTTCCTGAGTAATTGTTTGA+AGG 0.360884 2_4:+5970729 Msa0311090:CDS
ACCCAATACTGTTCCACAAT+TGG 0.365522 2_4:+5970905 Msa0311090:CDS
AAAGAATCTCCTAGGACTAA+TGG 0.365603 2_4:+5971497 Msa0311090:CDS
TGGAAGTTCGGATTTGGATT+TGG 0.366954 2_4:-5968465 None:intergenic
CGGCGGTGAATGAATCGATT+AGG 0.368057 2_4:+5968585 Msa0311090:CDS
GAAGGACTTGTAAGAGCAAC+TGG 0.370111 2_4:-5972847 None:intergenic
CCGACAAATTCTTTGATGTA+TGG 0.378528 2_4:-5970037 None:intergenic
GACTCGCCGAAAGTCTGATT+TGG 0.381818 2_4:-5975182 None:intergenic
TGCAATGATATCACCGATGA+TGG 0.384725 2_4:+5974049 Msa0311090:CDS
ATCATCTTCTCCAGGGGACT+CGG 0.388710 2_4:-5972948 None:intergenic
CTCTTGCAGTGTGCGCGACA+GGG 0.392256 2_4:+5969720 Msa0311090:intron
TCCAAAGCAGCTTGAGCCTC+AGG 0.392723 2_4:-5975448 None:intergenic
AAGAATCTCCTAGGACTAAT+GGG 0.392912 2_4:+5971498 Msa0311090:CDS
GGAAGCAAAAGATTGTCTTC+TGG 0.393079 2_4:+5969940 Msa0311090:intron
ACTTTGTTTGACAGAACAAC+TGG 0.395748 2_4:-5971134 None:intergenic
TTCCAATTGTGGAACAGTAT+TGG 0.400668 2_4:-5970907 None:intergenic
GTTGTTGGCAAATGCTCATA+AGG 0.401304 2_4:+5971766 Msa0311090:CDS
AGCCTCGTGTTCACAGTGTT+TGG 0.402114 2_4:+5970859 Msa0311090:CDS
ACATTATTTCAGTTTATTCT+GGG 0.403393 2_4:-5975833 None:intergenic
GAAGCAAAAGATTGTCTTCT+GGG 0.403903 2_4:+5969941 Msa0311090:CDS
TCTTAAACAATTGTCAGATT+GGG 0.407131 2_4:+5971223 Msa0311090:CDS
TTTATATAGCCATGTGTTGT+TGG 0.407224 2_4:-5971186 None:intergenic
CAAGGCAGCTGATTTCTTTG+AGG 0.408677 2_4:-5974912 None:intergenic
ATAAGAATATTTATCAAAAC+AGG 0.410894 2_4:-5970882 None:intergenic
TAGTGGTGGTGATTCGTTGC+CGG 0.412588 2_4:+5968532 Msa0311090:CDS
TACTTATCTCCCTTGCAAAT+AGG 0.412858 2_4:+5970062 Msa0311090:CDS
GCTCTTCTTGCCTGTTTGCT+CGG 0.413592 2_4:-5975343 None:intergenic
GCGAGTCGAAGCACTTGAAT+TGG 0.414700 2_4:+5975198 Msa0311090:CDS
AAAGCAAGGAATAGAGCATC+AGG 0.414753 2_4:-5970607 None:intergenic
AATTGGACTTCATCACCCTT+TGG 0.414789 2_4:-5974809 None:intergenic
GAGAAGATGATGCAGAGGTT+GGG 0.415139 2_4:+5972960 Msa0311090:CDS
GGCGGTGAATGAATCGATTA+GGG 0.415824 2_4:+5968586 Msa0311090:CDS
GGGAGAGGGGCCACGTCCTT+CGG 0.417055 2_4:+5971787 Msa0311090:CDS
GATTCTGATGATTCAGATAG+TGG 0.417094 2_4:+5974298 Msa0311090:CDS
AAGTACGAACCCAGATCATT+AGG 0.417639 2_4:-5971827 None:intergenic
ACCTCTGCATCATCTTCTCC+AGG 0.418263 2_4:-5972956 None:intergenic
GCAGCTCAGTCAGCGTATAT+CGG 0.418294 2_4:+5974748 Msa0311090:CDS
CTGGGCCGCCTATTCGCATA+TGG 0.421484 2_4:+5969959 Msa0311090:CDS
GGAAGTTCAGAAGGCTTATG+AGG 0.421556 2_4:+5968643 Msa0311090:CDS
TGGGTTATAGAATCTCTTCC+TGG 0.424403 2_4:+5971542 Msa0311090:CDS
GGAGTTTGAACAACAAAAGT+TGG 0.427677 2_4:-5974414 None:intergenic
AAGGCAGCTGATTTCTTTGA+GGG 0.429594 2_4:-5974911 None:intergenic
AATCTCTTTACCTCTTTACT+CGG 0.431970 2_4:-5975549 None:intergenic
CCAAAGCACCATATGCGAAT+AGG 0.434100 2_4:-5969967 None:intergenic
TCGTTGCCGGAGTTTCATAT+TGG 0.435279 2_4:+5968545 Msa0311090:CDS
CACACATCACTCACTGCGTT+CGG 0.435819 2_4:+5968180 Msa0311090:five_prime_UTR
ATTGTTGGTTTGGTTGAAGA+TGG 0.436653 2_4:-5968389 None:intergenic
ATCGACACTTGAATCTCTCT+TGG 0.440706 2_4:+5974832 Msa0311090:CDS
CCAAAGCATAAATACCTCTC+TGG 0.441278 2_4:-5971963 None:intergenic
CAAGCTGAGACTGGTGAAAC+AGG 0.441508 2_4:+5974202 Msa0311090:CDS
TGAACAGCTGCAGTTGTTGT+TGG 0.442984 2_4:+5971751 Msa0311090:CDS
AAATTTGATGAACCTGTTTG+TGG 0.444596 2_4:+5971394 Msa0311090:CDS
AAAGAGAAGAAAAGTCAGTC+TGG 0.445191 2_4:+5974373 Msa0311090:CDS
GACAAATATGCCGAGCAAAC+AGG 0.445834 2_4:+5975333 Msa0311090:CDS
TGATTCGCTAATGCTTCAAC+AGG 0.446357 2_4:-5970526 None:intergenic
GGAAGTAACTTCATCAATGA+AGG 0.447215 2_4:+5969827 Msa0311090:CDS
GTAGTTGAGGCAGATGAAAC+TGG 0.447442 2_4:+5974259 Msa0311090:CDS
TGGGGACTTATTTATGCCTT+CGG 0.447951 2_4:+5975638 Msa0311090:three_prime_UTR
CATTATCTTCATCCACAAAC+AGG 0.448918 2_4:-5971406 None:intergenic
GGTCTGTTCACTGCATCTCT+TGG 0.449608 2_4:+5971644 Msa0311090:CDS
TCAACTAGCGGCGGCGGTAG+TGG 0.449628 2_4:+5968515 Msa0311090:CDS
TTCAAAATTCATTTAAGGTG+GGG 0.455724 2_4:+5975620 Msa0311090:three_prime_UTR
TGGGGATGCACCTGAATTGA+TGG 0.458302 2_4:+5972979 Msa0311090:CDS
ACAAGAACATCCATCAATTC+AGG 0.458388 2_4:-5972989 None:intergenic
CAGCTCAGTCAGCGTATATC+GGG 0.458624 2_4:+5974749 Msa0311090:CDS
GTTGTTTGACTCTGATCTGA+AGG 0.458674 2_4:-5971440 None:intergenic
TGAAGTGACTTCATTTGAGT+TGG 0.462021 2_4:+5971670 Msa0311090:CDS
AAAATGAACCAGGACATATA+GGG 0.462437 2_4:+5975513 Msa0311090:exon
TATGGTGCTTTGGCTCGATC+AGG 0.468033 2_4:+5969977 Msa0311090:CDS
CGAGAAGTTACGAGTTCAAA+AGG 0.471599 2_4:+5971595 Msa0311090:CDS
ATTCTTCCCTTCACCACTCT+CGG 0.476182 2_4:-5975248 None:intergenic
CAAAAGAGTTGCTGTTATAG+TGG 0.477088 2_4:+5971262 Msa0311090:CDS
TATAAAATTATTGAGACGGC+AGG 0.477862 2_4:-5970103 None:intergenic
TGGATGATGATGCAATGTTC+AGG 0.478667 2_4:+5974323 Msa0311090:CDS
CACTGCGTTCGGCTTTGTTG+AGG 0.480452 2_4:+5968191 Msa0311090:five_prime_UTR
TTGAACAATCCTCTGCAGTT+CGG 0.481594 2_4:-5975020 None:intergenic
GGCAAATGCTCATAAGGGAG+AGG 0.486456 2_4:+5971772 Msa0311090:CDS
GGTCAAGGGATGGAGATTGA+TGG 0.487783 2_4:+5968668 Msa0311090:CDS
TTTGAATCTGCTGCAGAAGT+TGG 0.488189 2_4:+5970580 Msa0311090:CDS
CTTCAAAATTCATTTAAGGT+GGG 0.488212 2_4:+5975619 Msa0311090:three_prime_UTR
GAGTTTGAACAACAAAAGTT+GGG 0.488558 2_4:-5974413 None:intergenic
CATCGAAAGCTAAGTGCTTA+CGG 0.488573 2_4:-5971070 None:intergenic
TATGCGGTCTGCTATTGATC+AGG 0.490512 2_4:+5973051 Msa0311090:CDS
TCCCAATGGGTAGCAAGAAA+AGG 0.490679 2_4:+5968291 Msa0311090:exon
CGAACTTCCAGCTCCGGATT+CGG 0.490726 2_4:+5968478 Msa0311090:CDS
AACACATGGCTATATAAAGT+TGG 0.490755 2_4:+5971191 Msa0311090:CDS
CGAATCCGGAGCTGGAAGTT+CGG 0.490766 2_4:-5968477 None:intergenic
ATGAAGTTTATGGCTGTTCA+GGG 0.491134 2_4:+5971623 Msa0311090:CDS
TCTACCAACATAGCCGAATC+CGG 0.493250 2_4:-5968491 None:intergenic
AACTTCATCAATGAAGGGTC+AGG 0.494749 2_4:+5969833 Msa0311090:CDS
TAAACAATTGTCAGATTGGG+TGG 0.495021 2_4:+5971226 Msa0311090:CDS
CAAATCCGAACTTCCAGCTC+CGG 0.497690 2_4:+5968472 Msa0311090:CDS
GGAGAAGATGATGCAGAGGT+TGG 0.500648 2_4:+5972959 Msa0311090:CDS
CCATACATCAAAGAATTTGT+CGG 0.502813 2_4:+5970037 Msa0311090:CDS
TCACCAACTCTTTCATAGCA+TGG 0.505036 2_4:-5975312 None:intergenic
CTGAATCATCAGAATCTTCA+GGG 0.505240 2_4:-5974291 None:intergenic
TCAAACCACTTGTCCAGTCC+AGG 0.506758 2_4:-5970562 None:intergenic
TGGTGTGTTTAAGGATTTAG+CGG 0.508774 2_4:+5968565 Msa0311090:CDS
ATCCCAAATTCAATCCCAAT+GGG 0.510673 2_4:+5968278 Msa0311090:exon
TGTTATTGAAGCTCCTGGAC+TGG 0.511530 2_4:+5970549 Msa0311090:CDS
TGAGGCAGATGAAACTGGTC+AGG 0.511569 2_4:+5974264 Msa0311090:CDS
AACTGAAGGAATATTGCATA+AGG 0.511631 2_4:-5971867 None:intergenic
CACCAACTCTTTCATAGCAT+GGG 0.511792 2_4:-5975311 None:intergenic
TCTGATATTCCCGAGTCCCC+TGG 0.513649 2_4:+5972938 Msa0311090:CDS
GCTTCAAAATTCATTTAAGG+TGG 0.515192 2_4:+5975618 Msa0311090:three_prime_UTR
AGCTCCGGATTCGGCTATGT+TGG 0.515555 2_4:+5968487 Msa0311090:CDS
TCATCTTCTCCAGGGGACTC+GGG 0.515831 2_4:-5972947 None:intergenic
TCAGAATTCCCATTAGTCCT+AGG 0.515926 2_4:-5971506 None:intergenic
CAGGAAGACTTATCCATGAA+TGG 0.517068 2_4:+5969996 Msa0311090:CDS
GGAAGTAATGTATACTTGCC+TGG 0.517844 2_4:-5974475 None:intergenic
TTTAAAAGAAGACCATGGAT+TGG 0.519670 2_4:+5975118 Msa0311090:CDS
GAATGAATCGATTAGGGAAG+CGG 0.520234 2_4:+5968592 Msa0311090:CDS
AAGGCTTATGAGGGTGGTCA+AGG 0.520680 2_4:+5968653 Msa0311090:CDS
AATCATGTTATTGAAGCTCC+TGG 0.521109 2_4:+5970544 Msa0311090:CDS
AGCAGCAACCCTATATGTCC+TGG 0.521464 2_4:-5975521 None:intergenic
AACATAGCCGAATCCGGAGC+TGG 0.524306 2_4:-5968485 None:intergenic
TTTCCAGTTTCTTCAAACAA+AGG 0.525530 2_4:-5975492 None:intergenic
ATCTCTTTACCTCTTTACTC+GGG 0.526296 2_4:-5975548 None:intergenic
GACTTATTTATGCCTTCGGA+AGG 0.527759 2_4:+5975642 Msa0311090:three_prime_UTR
GTGAAACAGGTGAGAGCGAT+GGG 0.528108 2_4:+5974215 Msa0311090:CDS
TCACTAACTTCAGCAGTGTG+TGG 0.529673 2_4:-5974725 None:intergenic
GCTGCTTTGGAAACACAACT+TGG 0.530870 2_4:+5975460 Msa0311090:CDS
TGAATTGATGGATGTTCTTG+TGG 0.533307 2_4:+5972991 Msa0311090:CDS
ATGGAGATTGATGGTGATGG+TGG 0.533466 2_4:+5968677 Msa0311090:CDS
CAAAGTTGTTCAGTGCCTGA+TGG 0.535223 2_4:+5971151 Msa0311090:CDS
GAAATTGATCAAGCTGAGAC+TGG 0.535955 2_4:+5974193 Msa0311090:CDS
TGGTTGATAGTATATCCATC+AGG 0.537431 2_4:-5971166 None:intergenic
GAAGTGCCAAATCAGACTTT+CGG 0.537715 2_4:+5975176 Msa0311090:CDS
TTCTGAAATAGGCTCTATTG+AGG 0.539258 2_4:+5971472 Msa0311090:CDS
ATGTTACACAGGTAAGCCTC+AGG 0.539889 2_4:+5974661 Msa0311090:intron
TTTAAGAATTTCAAAATACC+AGG 0.540401 2_4:-5971560 None:intergenic
AGGTGTTTCTTCTTCAAGAG+AGG 0.542309 2_4:+5968781 Msa0311090:CDS
ACAAATGGTGAATGAGTTGA+AGG 0.542466 2_4:+5968622 Msa0311090:CDS
TTATTTCAGTTTATTCTGGG+TGG 0.544030 2_4:-5975830 None:intergenic
TTGAGGATAAAGAATCTCCT+AGG 0.544287 2_4:+5971489 Msa0311090:CDS
GCAGCTTCTGAGTACTCGCT+TGG 0.545003 2_4:-5972875 None:intergenic
GTTGAGCCGCCTAATGATCT+GGG 0.545720 2_4:+5971818 Msa0311090:CDS
AATCCCAAATTCAATCCCAA+TGG 0.547653 2_4:+5968277 Msa0311090:exon
GTGTGGGTTAACAAAGGCGC+GGG 0.547730 2_4:-5974708 None:intergenic
TGAGTTGAAGGAAGTTCAGA+AGG 0.548314 2_4:+5968634 Msa0311090:CDS
CGAAGCACTTGAATTGGTGA+TGG 0.548587 2_4:+5975204 Msa0311090:CDS
TGGGTGGTGCAAAACAATTA+CGG 0.549707 2_4:-5975814 None:intergenic
CTAGCAACCGAGAGTGGTGA+AGG 0.552221 2_4:+5975241 Msa0311090:CDS
CATCCTCATCATCTAAAGAC+CGG 0.553770 2_4:-5971898 None:intergenic
ATCTTCAACCAAACCAACAA+TGG 0.555287 2_4:+5968391 Msa0311090:CDS
GAAGAAAATATTGAAAGCAA+AGG 0.555883 2_4:+5974781 Msa0311090:CDS
GCTGTTCGTAGATTGATTCG+AGG 0.556442 2_4:+5968761 Msa0311090:CDS
CTCCCATGCTATGAAAGAGT+TGG 0.556719 2_4:+5975309 Msa0311090:CDS
ACGACATCAGCCGAAGGACG+TGG 0.558256 2_4:-5971797 None:intergenic
AGAAGATGATGCAGAGGTTG+GGG 0.559328 2_4:+5972961 Msa0311090:CDS
AGTAAAAGATTTGCAAGCAA+TGG 0.559584 2_4:+5971928 Msa0311090:CDS
CTTCCGGTCTTTAGATGATG+AGG 0.560084 2_4:+5971895 Msa0311090:CDS
AACACACCAATATGAAACTC+CGG 0.560688 2_4:-5968551 None:intergenic
TTGTTGGCAAATGCTCATAA+GGG 0.564120 2_4:+5971767 Msa0311090:CDS
ACTAGCGGCGGCGGTAGTGG+TGG 0.564350 2_4:+5968518 Msa0311090:CDS
CTGCTATTACCCGAGTAAAG+AGG 0.566987 2_4:+5975539 Msa0311090:three_prime_UTR
GGTCATGAGATGAGAAGAGA+AGG 0.567102 2_4:-5971049 None:intergenic
GGAAGCGGCGGTGAAACAAA+TGG 0.569612 2_4:+5968607 Msa0311090:CDS
CATCCGCATCAGCCCATCAT+CGG 0.572641 2_4:-5974062 None:intergenic
CCTGCAAGACATCCAGATGC+GGG 0.573562 2_4:+5974112 Msa0311090:CDS
AGTACTCGCTTGGACAAAGA+AGG 0.573716 2_4:-5972865 None:intergenic
AAGCTCCTGGACTGGACAAG+TGG 0.579076 2_4:+5970557 Msa0311090:CDS
GCAAATGCTCATAAGGGAGA+GGG 0.579740 2_4:+5971773 Msa0311090:CDS
CACTAACTTCAGCAGTGTGT+GGG 0.580709 2_4:-5974724 None:intergenic
TACTATCAACCAACAACACA+TGG 0.581340 2_4:+5971177 Msa0311090:CDS
AACAATTACTCAGGAAGGAG+AGG 0.581483 2_4:-5970723 None:intergenic
ATACCTTCAAACAATTACTC+AGG 0.583544 2_4:-5970732 None:intergenic
CAAGTATAAAATTATTGAGA+CGG 0.585225 2_4:-5970107 None:intergenic
GTAGATTCAACTAGCGGCGG+CGG 0.586586 2_4:+5968509 Msa0311090:CDS
AGTACCGCTTCCTATTTGCA+AGG 0.586680 2_4:-5970072 None:intergenic
TTGCGGAGTCCGAACTGCAG+AGG 0.587099 2_4:+5975011 Msa0311090:CDS
GGTGAAACAGGTGAGAGCGA+TGG 0.587248 2_4:+5974214 Msa0311090:CDS
GGATGAAGATAATGCCTTGG+AGG 0.589707 2_4:+5971415 Msa0311090:CDS
TTATGAGGGTGGTCAAGGGA+TGG 0.589760 2_4:+5968658 Msa0311090:CDS
CGACTCTGAGTCTGTAGTTG+AGG 0.592639 2_4:+5974246 Msa0311090:CDS
GCTATACAGAAGCACAGCAA+TGG 0.593564 2_4:+5971284 Msa0311090:CDS
TTGCAAAGAGCATTTGATGT+GGG 0.593810 2_4:-5971719 None:intergenic
AATACAGCATGGCCAATCCA+TGG 0.594671 2_4:-5975130 None:intergenic
ACTCAGGAAGGAGAGGTGAT+CGG 0.597768 2_4:-5970716 None:intergenic
AAAGCAAAGGATCATCCAAA+GGG 0.598470 2_4:+5974794 Msa0311090:CDS
GAAAGCAAAGGATCATCCAA+AGG 0.599025 2_4:+5974793 Msa0311090:CDS
ATTCTGATGATTCAGATAGT+GGG 0.599068 2_4:+5974299 Msa0311090:CDS
GATGCCGCATCTTCCAATTG+TGG 0.601907 2_4:-5970918 None:intergenic
CTTCAAACAATTACTCAGGA+AGG 0.602501 2_4:-5970728 None:intergenic
AAACAATTGTCAGATTGGGT+GGG 0.602741 2_4:+5971227 Msa0311090:CDS
TCTCCCTTGCAAATAGGAAG+CGG 0.604277 2_4:+5970068 Msa0311090:CDS
TGGTGCTATCGACAAAATCA+GGG 0.605594 2_4:+5969770 Msa0311090:CDS
GAAGTAACTTCATCAATGAA+GGG 0.606468 2_4:+5969828 Msa0311090:CDS
CCTCTGCATCATCTTCTCCA+GGG 0.606722 2_4:-5972955 None:intergenic
TTGAGTTACTAGTAAAAGGG+TGG 0.606996 2_4:+5975750 Msa0311090:three_prime_UTR
CGAACAGCATATCGAACAGA+AGG 0.607154 2_4:-5968746 None:intergenic
TTTCCAATAATGAAAGGATG+CGG 0.608175 2_4:-5974435 None:intergenic
AAGTCACTAGCAACCGAGAG+TGG 0.609058 2_4:+5975235 Msa0311090:CDS
TGTGGATGAAGATAATGCCT+TGG 0.609887 2_4:+5971412 Msa0311090:CDS
CTCTGCATCATCTTCTCCAG+GGG 0.613059 2_4:-5972954 None:intergenic
GGGATGGAGATTGATGGTGA+TGG 0.613191 2_4:+5968674 Msa0311090:CDS
GCAATGATATCACCGATGAT+GGG 0.613735 2_4:+5974050 Msa0311090:CDS
GTACCGCTTCCTATTTGCAA+GGG 0.614801 2_4:-5970071 None:intergenic
CTGATCTGAAGGTTCCTCCA+AGG 0.616326 2_4:-5971429 None:intergenic
TCTTAAAACATTGACTCCTG+AGG 0.616364 2_4:+5975432 Msa0311090:CDS
ACCTGCAAGACATCCAGATG+CGG 0.618983 2_4:+5974111 Msa0311090:CDS
AGTACGTAAGTTCTGTGTCA+AGG 0.622191 2_4:+5975369 Msa0311090:CDS
TGTTCCACAATTGGAAGATG+CGG 0.622868 2_4:+5970914 Msa0311090:CDS
CCCTGGAGAAGATGATGCAG+AGG 0.623336 2_4:+5972955 Msa0311090:CDS
AGGCTTATGAGGGTGGTCAA+GGG 0.628293 2_4:+5968654 Msa0311090:CDS
AAATATTTAAAAGAAGACCA+TGG 0.628974 2_4:+5975113 Msa0311090:CDS
GTACATCATCACTGCAGTCG+TGG 0.629610 2_4:-5972793 None:intergenic
GTTCAGAAGGCTTATGAGGG+TGG 0.630689 2_4:+5968647 Msa0311090:CDS
GAAGTTCAGAAGGCTTATGA+GGG 0.633937 2_4:+5968644 Msa0311090:CDS
TGATGATGCAATGTTCAGGA+TGG 0.635467 2_4:+5974327 Msa0311090:CDS
AAGCACCATATGCGAATAGG+CGG 0.636479 2_4:-5969964 None:intergenic
GAACTCGTAACTTCTCGTCG+TGG 0.643517 2_4:-5971589 None:intergenic
CTTGCAAAGAGCATTTGATG+TGG 0.647224 2_4:-5971720 None:intergenic
GTGAACACGAGGCTGACAGA+AGG 0.648318 2_4:-5970850 None:intergenic
GGCTCAACGACATCAGCCGA+AGG 0.649021 2_4:-5971803 None:intergenic
TGATCAATAGCAGACCGCAT+AGG 0.649279 2_4:-5973049 None:intergenic
CGCATAGGAGCTGATGACTG+TGG 0.649317 2_4:-5973034 None:intergenic
CAAATGCTCATAAGGGAGAG+GGG 0.651139 2_4:+5971774 Msa0311090:CDS
TGTGTGGGTTAACAAAGGCG+CGG 0.654635 2_4:-5974709 None:intergenic
AGCAGTGTGTGGGTTAACAA+AGG 0.655045 2_4:-5974714 None:intergenic
GACCGGAAGAGAGAAACTGA+AGG 0.657617 2_4:-5971881 None:intergenic
TCACAATTCAAAACAGAACC+CGG 0.659461 2_4:+5971353 Msa0311090:CDS
TAGCAACCGAGAGTGGTGAA+GGG 0.660003 2_4:+5975242 Msa0311090:CDS
CACAGTCATCAGCTCCTATG+CGG 0.663288 2_4:+5973035 Msa0311090:CDS
AAATAAAGCCAAATACAGCA+TGG 0.665895 2_4:-5975141 None:intergenic
GTCATGAGATGAGAAGAGAA+GGG 0.666467 2_4:-5971048 None:intergenic
TCACCGATGATGGGCTGATG+CGG 0.668428 2_4:+5974059 Msa0311090:CDS
TGATGATTCAGATAGTGGGA+TGG 0.668681 2_4:+5974303 Msa0311090:CDS
GGCCAAACACTGTGAACACG+AGG 0.670920 2_4:-5970861 None:intergenic
TGAATCGATTAGGGAAGCGG+CGG 0.676427 2_4:+5968595 Msa0311090:CDS
TGTGTTTAAGGATTTAGCGG+CGG 0.680588 2_4:+5968568 Msa0311090:CDS
AGTTGGACGAGAAATTTAGG+TGG 0.682366 2_4:+5971687 Msa0311090:CDS
ATGTTGGTAGATTCAACTAG+CGG 0.687387 2_4:+5968503 Msa0311090:CDS
GAAAATTTGACTGTATCACA+AGG 0.688705 2_4:+5971306 Msa0311090:CDS
CAGGAAGGAGAGGTGATCGG+CGG 0.689005 2_4:-5970713 None:intergenic
GGAAGCTACATTATCCAGAG+AGG 0.695301 2_4:+5971949 Msa0311090:CDS
GAGTACACAGTAAGAACCTG+AGG 0.695385 2_4:-5974677 None:intergenic
TACGAACCCAGATCATTAGG+CGG 0.700755 2_4:-5971824 None:intergenic
TTGGTAGATTCAACTAGCGG+CGG 0.734446 2_4:+5968506 Msa0311090:CDS
AATCATCAGAATCTTCAGGG+TGG 0.753774 2_4:-5974288 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTAGCTTTTATTAT+TGG + chr2_4:5969448-5969467 Msa0311090:intron 10.0%
!! TACAAATAATAATAAACAAT+AGG - chr2_4:5970502-5970521 None:intergenic 10.0%
!!! TTTTTTATATACCATTTTAA+GGG - chr2_4:5973276-5973295 None:intergenic 10.0%
!!! TTCTTAAATTTTTTATTGAG+AGG - chr2_4:5968347-5968366 None:intergenic 15.0%
!! TGCTTATAATATAAATGTTT+AGG - chr2_4:5969485-5969504 None:intergenic 15.0%
!!! TGCAACATTTTTTTTTTATT+TGG + chr2_4:5969572-5969591 Msa0311090:intron 15.0%
!!! AAAAACATTTTTAAGAATGT+AGG - chr2_4:5970271-5970290 None:intergenic 15.0%
!!! TATTTTTGGTGATAAAAATA+GGG - chr2_4:5970468-5970487 None:intergenic 15.0%
!! ATAAGAATATTTATCAAAAC+AGG - chr2_4:5970885-5970904 None:intergenic 15.0%
!!! TTTTGTGAAATTATTATTGA+AGG + chr2_4:5971023-5971042 Msa0311090:CDS 15.0%
!!! TTCAACATTTTAAATAATAG+AGG + chr2_4:5972066-5972085 Msa0311090:intron 15.0%
!!! GTTTTTTATATACCATTTTA+AGG - chr2_4:5973277-5973296 None:intergenic 15.0%
!!! TTTTTTTTTTGTAATTTACC+TGG + chr2_4:5973813-5973832 Msa0311090:intron 15.0%
!! TTAAAAAGATTTAGATATGA+AGG - chr2_4:5974621-5974640 None:intergenic 15.0%
!!! TATCTAAATCTTTTTAACAT+TGG + chr2_4:5974624-5974643 Msa0311090:intron 15.0%
!! TTAAAAAAAAAAAAGTCTGA+AGG - chr2_4:5975868-5975887 None:intergenic 15.0%
!!! ATTTGGGATTTTGAAATTTT+GGG - chr2_4:5968267-5968286 None:intergenic 20.0%
!!! AATTTGGGATTTTGAAATTT+TGG - chr2_4:5968268-5968287 None:intergenic 20.0%
!! ACAATAACAATACAAAACAA+AGG - chr2_4:5968871-5968890 None:intergenic 20.0%
!!! TGTATTGTTATTGTAGTTTT+AGG + chr2_4:5968877-5968896 Msa0311090:intron 20.0%
!!! GTATTGTTATTGTAGTTTTA+GGG + chr2_4:5968878-5968897 Msa0311090:intron 20.0%
!!! TTTTATAATTAGGGTATGTT+TGG + chr2_4:5968989-5969008 Msa0311090:intron 20.0%
!!! TTCATTTCATAAGCTATTTT+TGG + chr2_4:5969098-5969117 Msa0311090:intron 20.0%
!!! GTTGTTTCCATAAAATATTT+TGG + chr2_4:5969261-5969280 Msa0311090:intron 20.0%
!!! AAGTTCTCCAAAATATTTTA+TGG - chr2_4:5969271-5969290 None:intergenic 20.0%
!! AGAGTTTATGTGAAAATAAT+TGG + chr2_4:5969423-5969442 Msa0311090:intron 20.0%
!! TAAAATAAGTTAACAACACA+CGG - chr2_4:5969668-5969687 None:intergenic 20.0%
!! CAAGTATAAAATTATTGAGA+CGG - chr2_4:5970110-5970129 None:intergenic 20.0%
!!! AATTTTATACTTGGTTGAAA+AGG + chr2_4:5970117-5970136 Msa0311090:CDS 20.0%
!!! CTATTTTTGGTGATAAAAAT+AGG - chr2_4:5970469-5970488 None:intergenic 20.0%
!! TTTAAGAATTTCAAAATACC+AGG - chr2_4:5971563-5971582 None:intergenic 20.0%
!!! TATTTTGAAATTCTTAAAGC+TGG + chr2_4:5971565-5971584 Msa0311090:CDS 20.0%
!! AAAGGAAATAATGAAGTTTA+TGG + chr2_4:5971613-5971632 Msa0311090:CDS 20.0%
!! ATTTGATACTTTCAAAATGT+TGG + chr2_4:5972309-5972328 Msa0311090:intron 20.0%
!! AATTTACACTACTTTCAATT+GGG - chr2_4:5973409-5973428 None:intergenic 20.0%
!! AAAAACACAATTATTCGTTA+GGG - chr2_4:5973436-5973455 None:intergenic 20.0%
!! CAAAAATTTCCAATAATGAA+AGG - chr2_4:5974444-5974463 None:intergenic 20.0%
!!! TCAAATTTTCCAGAAAATAT+TGG + chr2_4:5975039-5975058 Msa0311090:CDS 20.0%
!! AAATATTTAAAAGAAGACCA+TGG + chr2_4:5975113-5975132 Msa0311090:CDS 20.0%
!!! ATTTTGAGTTACTAGTAAAA+GGG + chr2_4:5975747-5975766 Msa0311090:three_prime_UTR 20.0%
!! ACATTATTTCAGTTTATTCT+GGG - chr2_4:5975836-5975855 None:intergenic 20.0%
!! TACATTATTTCAGTTTATTC+TGG - chr2_4:5975837-5975856 None:intergenic 20.0%
!!! TTTGAAATTTTGGGGTTTTA+GGG - chr2_4:5968258-5968277 None:intergenic 25.0%
!!! TTTTGAAATTTTGGGGTTTT+AGG - chr2_4:5968259-5968278 None:intergenic 25.0%
!!! TTTGGGATTTTGAAATTTTG+GGG - chr2_4:5968266-5968285 None:intergenic 25.0%
!! TTCTTTTTCTTGAGATTCTA+TGG - chr2_4:5968324-5968343 None:intergenic 25.0%
!! TTCTTATGATTTTCCATTGT+TGG - chr2_4:5968407-5968426 None:intergenic 25.0%
!! GGAAATTAACTAATTTTCAC+TGG + chr2_4:5968899-5968918 Msa0311090:intron 25.0%
!!! TGGTGCTTGTTTTATAATTA+GGG + chr2_4:5968980-5968999 Msa0311090:intron 25.0%
! TTATACAAATAAGCTCTCTA+GGG + chr2_4:5969122-5969141 Msa0311090:intron 25.0%
! ATAAATCTACTACGAGTTTA+AGG - chr2_4:5969806-5969825 None:intergenic 25.0%
! TAAACTCGTAGTAGATTTAT+TGG + chr2_4:5969806-5969825 Msa0311090:CDS 25.0%
!! AATGCTGGATTATTATGTTT+TGG + chr2_4:5969868-5969887 Msa0311090:intron 25.0%
!! ATGCTGGATTATTATGTTTT+GGG + chr2_4:5969869-5969888 Msa0311090:intron 25.0%
!! CGTCTCAATAATTTTATACT+TGG + chr2_4:5970108-5970127 Msa0311090:CDS 25.0%
!! AGGCTTGAAATAACTATTTT+TGG - chr2_4:5970482-5970501 None:intergenic 25.0%
!!! GTATTGGTTATAGAAAGAAA+TGG + chr2_4:5970793-5970812 Msa0311090:intron 25.0%
! TTCTTAAACAATTGTCAGAT+TGG + chr2_4:5971222-5971241 Msa0311090:CDS 25.0%
! TCTTAAACAATTGTCAGATT+GGG + chr2_4:5971223-5971242 Msa0311090:CDS 25.0%
! ACTATTAGAATTTAGGCTTA+TGG + chr2_4:5972199-5972218 Msa0311090:intron 25.0%
!!! TTTCTTTGTTTTTGTTGATC+AGG - chr2_4:5972463-5972482 None:intergenic 25.0%
! AATAAACAGAACCCTTAAAA+TGG + chr2_4:5973262-5973281 Msa0311090:intron 25.0%
! GAATTTACACTACTTTCAAT+TGG - chr2_4:5973410-5973429 None:intergenic 25.0%
! CAAAAACACAATTATTCGTT+AGG - chr2_4:5973437-5973456 None:intergenic 25.0%
! TAAACTAAAGAGCTTCAATT+AGG - chr2_4:5973476-5973495 None:intergenic 25.0%
!! AATTGAAGCTCTTTAGTTTA+TGG + chr2_4:5973476-5973495 Msa0311090:intron 25.0%
!!! ACTTTAAAATGTTCATGAAG+CGG - chr2_4:5973527-5973546 None:intergenic 25.0%
!! TTTTCTTGTCATCTAGAAAA+AGG + chr2_4:5973632-5973651 Msa0311090:intron 25.0%
!! TTTTCTTGTCATCTAGAAAA+AGG + chr2_4:5973632-5973651 Msa0311090:intron 25.0%
! AGGAACTTTAATTGAATGAA+AGG + chr2_4:5973740-5973759 Msa0311090:intron 25.0%
! AGATGATTAAGTCTTCTAAA+TGG - chr2_4:5973942-5973961 None:intergenic 25.0%
!! ATTTTTGTTCATGAAAATCC+AGG + chr2_4:5974457-5974476 Msa0311090:CDS 25.0%
! AAATCTATTTATCCACTTTG+TGG - chr2_4:5974570-5974589 None:intergenic 25.0%
! GAAGAAAATATTGAAAGCAA+AGG + chr2_4:5974781-5974800 Msa0311090:CDS 25.0%
!! AGGAAGAAACCATTTTATAT+CGG - chr2_4:5974940-5974959 None:intergenic 25.0%
!! AATCCAAAAGGAAGAATTTT+GGG - chr2_4:5974966-5974985 None:intergenic 25.0%
!! AAATCCAAAAGGAAGAATTT+TGG - chr2_4:5974967-5974986 None:intergenic 25.0%
!! GACAATTTTCAAAATCCAAA+AGG - chr2_4:5974978-5974997 None:intergenic 25.0%
!! AATTTTCCAGAAAATATTGG+TGG + chr2_4:5975042-5975061 Msa0311090:CDS 25.0%
!! AATAATCCACCAATATTTTC+TGG - chr2_4:5975051-5975070 None:intergenic 25.0%
!!! CAATGTTTTAAGAAGATACT+TGG - chr2_4:5975425-5975444 None:intergenic 25.0%
! GAAGCTTCAAAATTCATTTA+AGG + chr2_4:5975615-5975634 Msa0311090:three_prime_UTR 25.0%
!! CTTCAAAATTCATTTAAGGT+GGG + chr2_4:5975619-5975638 Msa0311090:three_prime_UTR 25.0%
!! TTCAAAATTCATTTAAGGTG+GGG + chr2_4:5975620-5975639 Msa0311090:three_prime_UTR 25.0%
!!! CATTTTGAGTTACTAGTAAA+AGG + chr2_4:5975746-5975765 Msa0311090:three_prime_UTR 25.0%
! AAAGAGGAAGAAGAGTTTTA+GGG - chr2_4:5968231-5968250 None:intergenic 30.0%
! AAAAGAGGAAGAAGAGTTTT+AGG - chr2_4:5968232-5968251 None:intergenic 30.0%
!! ATGATTTTCCATTGTTGGTT+TGG - chr2_4:5968402-5968421 None:intergenic 30.0%
GTTTCATATTGGTGTGTTTA+AGG + chr2_4:5968556-5968575 Msa0311090:CDS 30.0%
TTGAAGCTGAGAAAAATGAT+GGG + chr2_4:5968708-5968727 Msa0311090:CDS 30.0%
TACCACCTAAGTATAGAAAT+TGG - chr2_4:5968926-5968945 None:intergenic 30.0%
!!! GTGGTGCTTGTTTTATAATT+AGG + chr2_4:5968979-5968998 Msa0311090:intron 30.0%
AATTAGGGTATGTTTGGATT+TGG + chr2_4:5968995-5969014 Msa0311090:intron 30.0%
CTTATACAAATAAGCTCTCT+AGG + chr2_4:5969121-5969140 Msa0311090:intron 30.0%
TAAGCTGTTTATCCAAACAA+GGG - chr2_4:5969148-5969167 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+AGG - chr2_4:5969149-5969168 None:intergenic 30.0%
!! GCTTACATAAGCTATTTCTA+TGG + chr2_4:5969200-5969219 Msa0311090:intron 30.0%
TCAAATAAGCCAATCTAAAC+AGG + chr2_4:5969374-5969393 Msa0311090:intron 30.0%
ATTTAGCTGTTTATCCAAAC+AGG + chr2_4:5969524-5969543 Msa0311090:intron 30.0%
TTTAGCTGTTTATCCAAACA+GGG + chr2_4:5969525-5969544 Msa0311090:intron 30.0%
ATGAAACATGATCATGATTC+AGG - chr2_4:5969636-5969655 None:intergenic 30.0%
GAAGTAACTTCATCAATGAA+GGG + chr2_4:5969828-5969847 Msa0311090:CDS 30.0%
!!! TTATGTTTTGGGAAAATCGT+CGG + chr2_4:5969880-5969899 Msa0311090:intron 30.0%
TGTATTCATTGTGAAATTGC+AGG + chr2_4:5969919-5969938 Msa0311090:intron 30.0%
! TTTTATCATTGCTCCATTCA+TGG - chr2_4:5970012-5970031 None:intergenic 30.0%
CCATACATCAAAGAATTTGT+CGG + chr2_4:5970037-5970056 Msa0311090:CDS 30.0%
TATAAAATTATTGAGACGGC+AGG - chr2_4:5970106-5970125 None:intergenic 30.0%
GTTTGTATATCTTATGCAGA+AGG + chr2_4:5970139-5970158 Msa0311090:intron 30.0%
!!! GATTGGCTTTGGATTTTAAT+AGG + chr2_4:5970219-5970238 Msa0311090:intron 30.0%
! CATTTGATAATTGCTGAACT+TGG + chr2_4:5970397-5970416 Msa0311090:intron 30.0%
AAAAAATTGGTAGAGCTGAA+CGG - chr2_4:5970691-5970710 None:intergenic 30.0%
ATACCTTCAAACAATTACTC+AGG - chr2_4:5970735-5970754 None:intergenic 30.0%
TGACAGATACTACTTTGTAT+TGG + chr2_4:5970777-5970796 Msa0311090:intron 30.0%
TTTATATAGCCATGTGTTGT+TGG - chr2_4:5971189-5971208 None:intergenic 30.0%
AACACATGGCTATATAAAGT+TGG + chr2_4:5971191-5971210 Msa0311090:CDS 30.0%
GAAAATTTGACTGTATCACA+AGG + chr2_4:5971306-5971325 Msa0311090:CDS 30.0%
! TTGAATAAAAAGCATGCAAC+CGG - chr2_4:5971375-5971394 None:intergenic 30.0%
AAATTTGATGAACCTGTTTG+TGG + chr2_4:5971394-5971413 Msa0311090:CDS 30.0%
!! ACAGACGAAAATTCTGAAAT+AGG + chr2_4:5971461-5971480 Msa0311090:CDS 30.0%
!! ATTCTGACTTTTTGAAGAGT+TGG + chr2_4:5971522-5971541 Msa0311090:CDS 30.0%
!! TTCTGACTTTTTGAAGAGTT+GGG + chr2_4:5971523-5971542 Msa0311090:CDS 30.0%
AACTGAAGGAATATTGCATA+AGG - chr2_4:5971870-5971889 None:intergenic 30.0%
AGTAAAAGATTTGCAAGCAA+TGG + chr2_4:5971928-5971947 Msa0311090:CDS 30.0%
TTGGAACTTAAAACTGGAAA+AGG - chr2_4:5972026-5972045 None:intergenic 30.0%
ATCTCATTGGAACTTAAAAC+TGG - chr2_4:5972032-5972051 None:intergenic 30.0%
GGGACTAACTATTAGAATTT+AGG + chr2_4:5972192-5972211 Msa0311090:intron 30.0%
! GACATTATTATGCCTTTTCT+AGG + chr2_4:5972381-5972400 Msa0311090:intron 30.0%
ATCCAATTTCTTGTCTGAAA+TGG + chr2_4:5972421-5972440 Msa0311090:intron 30.0%
ATCCATTTCAGACAAGAAAT+TGG - chr2_4:5972426-5972445 None:intergenic 30.0%
! AATTTCTTGTCTGAAATGGA+TGG + chr2_4:5972425-5972444 Msa0311090:intron 30.0%
AAAGAAACAGAGTAAATCAG+TGG + chr2_4:5972476-5972495 Msa0311090:intron 30.0%
TTAAAGGAGTTAAAGGTCTA+GGG - chr2_4:5972602-5972621 None:intergenic 30.0%
ATTAAAGGAGTTAAAGGTCT+AGG - chr2_4:5972603-5972622 None:intergenic 30.0%
ATACAGAAATACACACATCA+GGG - chr2_4:5972661-5972680 None:intergenic 30.0%
AATACAGAAATACACACATC+AGG - chr2_4:5972662-5972681 None:intergenic 30.0%
!!! TGAGTTCGATTTTTTCCTTT+TGG + chr2_4:5973377-5973396 Msa0311090:intron 30.0%
! CTTTAGTTTATGGAGGTAAT+TGG + chr2_4:5973486-5973505 Msa0311090:intron 30.0%
!! CTTTAAAATGTTCATGAAGC+GGG - chr2_4:5973526-5973545 None:intergenic 30.0%
ATCTATCTCATATAACAACC+AGG - chr2_4:5973834-5973853 None:intergenic 30.0%
TAAACTCAATCCTTCTTTGT+TGG + chr2_4:5973906-5973925 Msa0311090:intron 30.0%
ATTCTGATGATTCAGATAGT+GGG + chr2_4:5974299-5974318 Msa0311090:CDS 30.0%
GAGTTTGAACAACAAAAGTT+GGG - chr2_4:5974416-5974435 None:intergenic 30.0%
TTTCCAATAATGAAAGGATG+CGG - chr2_4:5974438-5974457 None:intergenic 30.0%
AACTAGCATCAAAACCATTT+AGG + chr2_4:5974867-5974886 Msa0311090:CDS 30.0%
!!! AACCATTTTATATCGGTTCA+AGG - chr2_4:5974933-5974952 None:intergenic 30.0%
!!! TGTCGATTCAAGAAATTTTG+CGG + chr2_4:5974994-5975013 Msa0311090:CDS 30.0%
TTTAAAAGAAGACCATGGAT+TGG + chr2_4:5975118-5975137 Msa0311090:CDS 30.0%
AAATAAAGCCAAATACAGCA+TGG - chr2_4:5975144-5975163 None:intergenic 30.0%
!!! TGCTGTATTTGGCTTTATTT+TGG + chr2_4:5975144-5975163 Msa0311090:CDS 30.0%
!! TTTTAAGAAGATACTTGGTG+AGG - chr2_4:5975420-5975439 None:intergenic 30.0%
! ATTCCTTTGTTTGAAGAAAC+TGG + chr2_4:5975489-5975508 Msa0311090:CDS 30.0%
TTTCCAGTTTCTTCAAACAA+AGG - chr2_4:5975495-5975514 None:intergenic 30.0%
AAAAATGAACCAGGACATAT+AGG + chr2_4:5975512-5975531 Msa0311090:exon 30.0%
AAAATGAACCAGGACATATA+GGG + chr2_4:5975513-5975532 Msa0311090:exon 30.0%
AATCTCTTTACCTCTTTACT+CGG - chr2_4:5975552-5975571 None:intergenic 30.0%
GCTTCAAAATTCATTTAAGG+TGG + chr2_4:5975618-5975637 Msa0311090:three_prime_UTR 30.0%
TACGGTAGAAAATGTGATTT+CGG - chr2_4:5975799-5975818 None:intergenic 30.0%
TTATTTCAGTTTATTCTGGG+TGG - chr2_4:5975833-5975852 None:intergenic 30.0%
AATCCCAAATTCAATCCCAA+TGG + chr2_4:5968277-5968296 Msa0311090:exon 35.0%
ATCCCAAATTCAATCCCAAT+GGG + chr2_4:5968278-5968297 Msa0311090:exon 35.0%
TACCCATTGGGATTGAATTT+GGG - chr2_4:5968283-5968302 None:intergenic 35.0%
!! ATTGTTGGTTTGGTTGAAGA+TGG - chr2_4:5968392-5968411 None:intergenic 35.0%
ATCTTCAACCAAACCAACAA+TGG + chr2_4:5968391-5968410 Msa0311090:CDS 35.0%
TTCGGATTTGGATTTGGATT+TGG - chr2_4:5968462-5968481 None:intergenic 35.0%
! ATGTTGGTAGATTCAACTAG+CGG + chr2_4:5968503-5968522 Msa0311090:CDS 35.0%
AACACACCAATATGAAACTC+CGG - chr2_4:5968554-5968573 None:intergenic 35.0%
TGGTGTGTTTAAGGATTTAG+CGG + chr2_4:5968565-5968584 Msa0311090:CDS 35.0%
! ACAAATGGTGAATGAGTTGA+AGG + chr2_4:5968622-5968641 Msa0311090:CDS 35.0%
CTTGAAGCTGAGAAAAATGA+TGG + chr2_4:5968707-5968726 Msa0311090:CDS 35.0%
CTGGTCCAATTTCTATACTT+AGG + chr2_4:5968918-5968937 Msa0311090:intron 35.0%
GTCCAATTTCTATACTTAGG+TGG + chr2_4:5968921-5968940 Msa0311090:intron 35.0%
AGGGCTTATGGAAACAATTA+TGG + chr2_4:5969071-5969090 Msa0311090:intron 35.0%
TATTCTAGGCCTGTTTAGAT+TGG - chr2_4:5969386-5969405 None:intergenic 35.0%
CTGTCTTCATAAGCTATTCT+AGG - chr2_4:5969400-5969419 None:intergenic 35.0%
TAAAACACTAAGACCCTGTT+TGG - chr2_4:5969541-5969560 None:intergenic 35.0%
AAAAATGTTGCAACAAGCCT+TGG - chr2_4:5969564-5969583 None:intergenic 35.0%
! CTAGGTTTAACACTTTTAGC+TGG + chr2_4:5969750-5969769 Msa0311090:CDS 35.0%
GGAAGTAACTTCATCAATGA+AGG + chr2_4:5969827-5969846 Msa0311090:CDS 35.0%
GAAGCAAAAGATTGTCTTCT+GGG + chr2_4:5969941-5969960 Msa0311090:CDS 35.0%
CCGACAAATTCTTTGATGTA+TGG - chr2_4:5970040-5970059 None:intergenic 35.0%
TACTTATCTCCCTTGCAAAT+AGG + chr2_4:5970062-5970081 Msa0311090:CDS 35.0%
AATCATGTTATTGAAGCTCC+TGG + chr2_4:5970544-5970563 Msa0311090:CDS 35.0%
!!! TCTCTCGAACTTTTAAAGCA+AGG - chr2_4:5970624-5970643 None:intergenic 35.0%
TCTACAGACAGTTCCATTTA+TGG + chr2_4:5970649-5970668 Msa0311090:CDS 35.0%
! TGGTAGTAGTTTGCCATAAA+TGG - chr2_4:5970665-5970684 None:intergenic 35.0%
CTTCAAACAATTACTCAGGA+AGG - chr2_4:5970731-5970750 None:intergenic 35.0%
CTTCCTGAGTAATTGTTTGA+AGG + chr2_4:5970729-5970748 Msa0311090:CDS 35.0%
GTAGTATCTGTCATGAATAG+AGG - chr2_4:5970770-5970789 None:intergenic 35.0%
TCCAATTGTGGAACAGTATT+GGG - chr2_4:5970909-5970928 None:intergenic 35.0%
TTCCAATTGTGGAACAGTAT+TGG - chr2_4:5970910-5970929 None:intergenic 35.0%
! ACTTTGTTTGACAGAACAAC+TGG - chr2_4:5971137-5971156 None:intergenic 35.0%
!! TGGTTGATAGTATATCCATC+AGG - chr2_4:5971169-5971188 None:intergenic 35.0%
TACTATCAACCAACAACACA+TGG + chr2_4:5971177-5971196 Msa0311090:CDS 35.0%
TAAACAATTGTCAGATTGGG+TGG + chr2_4:5971226-5971245 Msa0311090:CDS 35.0%
AAACAATTGTCAGATTGGGT+GGG + chr2_4:5971227-5971246 Msa0311090:CDS 35.0%
! CAAAAGAGTTGCTGTTATAG+TGG + chr2_4:5971262-5971281 Msa0311090:CDS 35.0%
TCACAATTCAAAACAGAACC+CGG + chr2_4:5971353-5971372 Msa0311090:CDS 35.0%
! TGAATAAAAAGCATGCAACC+GGG - chr2_4:5971374-5971393 None:intergenic 35.0%
CATTATCTTCATCCACAAAC+AGG - chr2_4:5971409-5971428 None:intergenic 35.0%
!! TTCTGAAATAGGCTCTATTG+AGG + chr2_4:5971472-5971491 Msa0311090:CDS 35.0%
TTGAGGATAAAGAATCTCCT+AGG + chr2_4:5971489-5971508 Msa0311090:CDS 35.0%
AAAGAATCTCCTAGGACTAA+TGG + chr2_4:5971497-5971516 Msa0311090:CDS 35.0%
AAGAATCTCCTAGGACTAAT+GGG + chr2_4:5971498-5971517 Msa0311090:CDS 35.0%
AATGAAGTTTATGGCTGTTC+AGG + chr2_4:5971622-5971641 Msa0311090:CDS 35.0%
ATGAAGTTTATGGCTGTTCA+GGG + chr2_4:5971623-5971642 Msa0311090:CDS 35.0%
TGAAGTGACTTCATTTGAGT+TGG + chr2_4:5971670-5971689 Msa0311090:CDS 35.0%
!! TTGAGTTGGACGAGAAATTT+AGG + chr2_4:5971684-5971703 Msa0311090:CDS 35.0%
!! TTGCAAAGAGCATTTGATGT+GGG - chr2_4:5971722-5971741 None:intergenic 35.0%
TTGTTGGCAAATGCTCATAA+GGG + chr2_4:5971767-5971786 Msa0311090:CDS 35.0%
TTAAAACTGGAAAAGGAACG+CGG - chr2_4:5972019-5972038 None:intergenic 35.0%
! TAGGGTTTGAATTCTGGAAA+GGG - chr2_4:5972584-5972603 None:intergenic 35.0%
TAGGGGATTAAAGGAGTTAA+AGG - chr2_4:5972609-5972628 None:intergenic 35.0%
GATGCTTATGTTTATCTCTG+CGG + chr2_4:5972749-5972768 Msa0311090:intron 35.0%
ACAAGAACATCCATCAATTC+AGG - chr2_4:5972992-5973011 None:intergenic 35.0%
! TGAATTGATGGATGTTCTTG+TGG + chr2_4:5972991-5973010 Msa0311090:CDS 35.0%
GTTATACCTGTATGCCAATA+TGG + chr2_4:5973153-5973172 Msa0311090:intron 35.0%
! CTATCATTTTCATAGTCTCG+AGG + chr2_4:5973308-5973327 Msa0311090:intron 35.0%
! TGAAGCTCTTTAGTTTATGG+AGG + chr2_4:5973479-5973498 Msa0311090:intron 35.0%
!! TTAAAGTGCCTTTTCCCATA+AGG + chr2_4:5973540-5973559 Msa0311090:intron 35.0%
AAGTTAGCATCTCTGTATGT+AGG + chr2_4:5974012-5974031 Msa0311090:intron 35.0%
CTGAATCATCAGAATCTTCA+GGG - chr2_4:5974294-5974313 None:intergenic 35.0%
TCTGAATCATCAGAATCTTC+AGG - chr2_4:5974295-5974314 None:intergenic 35.0%
GATTCTGATGATTCAGATAG+TGG + chr2_4:5974298-5974317 Msa0311090:CDS 35.0%
AAAGAGAAGAAAAGTCAGTC+TGG + chr2_4:5974373-5974392 Msa0311090:CDS 35.0%
GGAGTTTGAACAACAAAAGT+TGG - chr2_4:5974417-5974436 None:intergenic 35.0%
ATGTTGTCTTGATGTTACAC+AGG + chr2_4:5974650-5974669 Msa0311090:intron 35.0%
TCTTACTGTGTACTCACATT+TGG + chr2_4:5974685-5974704 Msa0311090:CDS 35.0%
AAAGCAAAGGATCATCCAAA+GGG + chr2_4:5974794-5974813 Msa0311090:CDS 35.0%
!! GAGATTCAAGTGTCGATAAT+TGG - chr2_4:5974829-5974848 None:intergenic 35.0%
TGCCTTGAACCGATATAAAA+TGG + chr2_4:5974928-5974947 Msa0311090:CDS 35.0%
! AAAGGAAGAATTTTGGGCAA+AGG - chr2_4:5974960-5974979 None:intergenic 35.0%
! TTGCCCAAAATTCTTCCTTT+TGG + chr2_4:5974960-5974979 Msa0311090:CDS 35.0%
!! TCTTAAAACATTGACTCCTG+AGG + chr2_4:5975432-5975451 Msa0311090:CDS 35.0%
AGAAACTGGAAAAATGAACC+AGG + chr2_4:5975503-5975522 Msa0311090:exon 35.0%
ATCTCTTTACCTCTTTACTC+GGG - chr2_4:5975551-5975570 None:intergenic 35.0%
TTGAGTTACTAGTAAAAGGG+TGG + chr2_4:5975750-5975769 Msa0311090:three_prime_UTR 35.0%
!!! AGAAGAGTTTTAGGGTTCAG+CGG - chr2_4:5968223-5968242 None:intergenic 40.0%
CTACCCATTGGGATTGAATT+TGG - chr2_4:5968284-5968303 None:intergenic 40.0%
! TCCTTTTCTTGCTACCCATT+GGG - chr2_4:5968295-5968314 None:intergenic 40.0%
! TTCCTTTTCTTGCTACCCAT+TGG - chr2_4:5968296-5968315 None:intergenic 40.0%
TGGAAGTTCGGATTTGGATT+TGG - chr2_4:5968468-5968487 None:intergenic 40.0%
TGTGTTTAAGGATTTAGCGG+CGG + chr2_4:5968568-5968587 Msa0311090:CDS 40.0%
GAATGAATCGATTAGGGAAG+CGG + chr2_4:5968592-5968611 Msa0311090:CDS 40.0%
! TGAGTTGAAGGAAGTTCAGA+AGG + chr2_4:5968634-5968653 Msa0311090:CDS 40.0%
GAAGTTCAGAAGGCTTATGA+GGG + chr2_4:5968644-5968663 Msa0311090:CDS 40.0%
!! AGCTGAGAAAAATGATGGGT+TGG + chr2_4:5968712-5968731 Msa0311090:CDS 40.0%
AGGTGTTTCTTCTTCAAGAG+AGG + chr2_4:5968781-5968800 Msa0311090:CDS 40.0%
GTGATATATGTGTGTGTGTG+TGG + chr2_4:5968960-5968979 Msa0311090:intron 40.0%
GGGTATGTTTGGATTTGGAT+TGG + chr2_4:5969000-5969019 Msa0311090:intron 40.0%
! AGGGTCTTAGTGTTTTACCA+AGG + chr2_4:5969544-5969563 Msa0311090:intron 40.0%
!! TGGTGCTATCGACAAAATCA+GGG + chr2_4:5969770-5969789 Msa0311090:CDS 40.0%
AACTTCATCAATGAAGGGTC+AGG + chr2_4:5969833-5969852 Msa0311090:CDS 40.0%
ATGAAGGGTCAGGTATAAGA+TGG + chr2_4:5969843-5969862 Msa0311090:intron 40.0%
AGGTATAAGATGGTCAATGC+TGG + chr2_4:5969853-5969872 Msa0311090:intron 40.0%
GGAAGCAAAAGATTGTCTTC+TGG + chr2_4:5969940-5969959 Msa0311090:intron 40.0%
CAGGAAGACTTATCCATGAA+TGG + chr2_4:5969996-5970015 Msa0311090:CDS 40.0%
AAAGCCAATCACACCATAGT+GGG - chr2_4:5970209-5970228 None:intergenic 40.0%
ACGTGTTTGCATGAGTTTGT+GGG - chr2_4:5970356-5970375 None:intergenic 40.0%
TGATTCGCTAATGCTTCAAC+AGG - chr2_4:5970529-5970548 None:intergenic 40.0%
TTTGAATCTGCTGCAGAAGT+TGG + chr2_4:5970580-5970599 Msa0311090:CDS 40.0%
! AAAGCAAGGAATAGAGCATC+AGG - chr2_4:5970610-5970629 None:intergenic 40.0%
AACAATTACTCAGGAAGGAG+AGG - chr2_4:5970726-5970745 None:intergenic 40.0%
ATGCGTTTCCTGAATATTGC+AGG + chr2_4:5970821-5970840 Msa0311090:intron 40.0%
! GGTTGATTCCTGCAATATTC+AGG - chr2_4:5970832-5970851 None:intergenic 40.0%
ACCCAATACTGTTCCACAAT+TGG + chr2_4:5970905-5970924 Msa0311090:CDS 40.0%
TGTTCCACAATTGGAAGATG+CGG + chr2_4:5970914-5970933 Msa0311090:CDS 40.0%
GTCATGAGATGAGAAGAGAA+GGG - chr2_4:5971051-5971070 None:intergenic 40.0%
CATCGAAAGCTAAGTGCTTA+CGG - chr2_4:5971073-5971092 None:intergenic 40.0%
TGTGGATGAAGATAATGCCT+TGG + chr2_4:5971412-5971431 Msa0311090:CDS 40.0%
GTTGTTTGACTCTGATCTGA+AGG - chr2_4:5971443-5971462 None:intergenic 40.0%
TCAGAATTCCCATTAGTCCT+AGG - chr2_4:5971509-5971528 None:intergenic 40.0%
TGGGTTATAGAATCTCTTCC+TGG + chr2_4:5971542-5971561 Msa0311090:CDS 40.0%
CGAGAAGTTACGAGTTCAAA+AGG + chr2_4:5971595-5971614 Msa0311090:CDS 40.0%
AGTTGGACGAGAAATTTAGG+TGG + chr2_4:5971687-5971706 Msa0311090:CDS 40.0%
! GCATTTGATGTGGGAGATTT+TGG - chr2_4:5971713-5971732 None:intergenic 40.0%
!! CTTGCAAAGAGCATTTGATG+TGG - chr2_4:5971723-5971742 None:intergenic 40.0%
GTTGTTGGCAAATGCTCATA+AGG + chr2_4:5971766-5971785 Msa0311090:CDS 40.0%
AAGTACGAACCCAGATCATT+AGG - chr2_4:5971830-5971849 None:intergenic 40.0%
TTCCTTCAGTTTCTCTCTTC+CGG + chr2_4:5971879-5971898 Msa0311090:CDS 40.0%
CATCCTCATCATCTAAAGAC+CGG - chr2_4:5971901-5971920 None:intergenic 40.0%
CCAAAGCATAAATACCTCTC+TGG - chr2_4:5971966-5971985 None:intergenic 40.0%
!! CCAGAGAGGTATTTATGCTT+TGG + chr2_4:5971963-5971982 Msa0311090:intron 40.0%
TTCCAATGAGATTAGCAGCT+AGG + chr2_4:5972040-5972059 Msa0311090:intron 40.0%
TACCTAGCTGCTAATCTCAT+TGG - chr2_4:5972045-5972064 None:intergenic 40.0%
! ATTCCATCTAGCCTTTGCAT+TGG + chr2_4:5972107-5972126 Msa0311090:intron 40.0%
TACAACACTAGCCAATGCAA+AGG - chr2_4:5972121-5972140 None:intergenic 40.0%
AATCCAAATCGAGGAGTTGT+AGG - chr2_4:5972171-5972190 None:intergenic 40.0%
!! ACAACTCCTCGATTTGGATT+TGG + chr2_4:5972171-5972190 Msa0311090:intron 40.0%
!! CAACTCCTCGATTTGGATTT+GGG + chr2_4:5972172-5972191 Msa0311090:intron 40.0%
TTAGTCCCAAATCCAAATCG+AGG - chr2_4:5972180-5972199 None:intergenic 40.0%
TTGTCAAGTGAGCAGTGAAA+CGG - chr2_4:5972339-5972358 None:intergenic 40.0%
ACCATGTGAGTTCCTAGAAA+AGG - chr2_4:5972396-5972415 None:intergenic 40.0%
! TTTGAATTCTGGAAAGGGAC+AGG - chr2_4:5972579-5972598 None:intergenic 40.0%
! CTAGGGTTTGAATTCTGGAA+AGG - chr2_4:5972585-5972604 None:intergenic 40.0%
! AAGGTCTAGGGTTTGAATTC+TGG - chr2_4:5972590-5972609 None:intergenic 40.0%
! AATACACACATCAGGGTGTT+GGG - chr2_4:5972654-5972673 None:intergenic 40.0%
AAATACACACATCAGGGTGT+TGG - chr2_4:5972655-5972674 None:intergenic 40.0%
! TTACGAAGCAAAGAGCATAC+AGG - chr2_4:5973102-5973121 None:intergenic 40.0%
CTCATAGCAGTCTCAATTTC+AGG - chr2_4:5973218-5973237 None:intergenic 40.0%
ATTCTGCTGCCAAACCTTAT+GGG - chr2_4:5973557-5973576 None:intergenic 40.0%
! GAATGAAAGGTATGACTGCA+TGG + chr2_4:5973753-5973772 Msa0311090:intron 40.0%
CTCAATCCTTCTTTGTTGGA+AGG + chr2_4:5973910-5973929 Msa0311090:intron 40.0%
TCATTGCCTTCCAACAAAGA+AGG - chr2_4:5973919-5973938 None:intergenic 40.0%
ATCATCTCTCGCACATATCA+TGG + chr2_4:5973955-5973974 Msa0311090:intron 40.0%
TGCAATGATATCACCGATGA+TGG + chr2_4:5974049-5974068 Msa0311090:CDS 40.0%
GCAATGATATCACCGATGAT+GGG + chr2_4:5974050-5974069 Msa0311090:CDS 40.0%
GAAATTGATCAAGCTGAGAC+TGG + chr2_4:5974193-5974212 Msa0311090:CDS 40.0%
AATCATCAGAATCTTCAGGG+TGG - chr2_4:5974291-5974310 None:intergenic 40.0%
!! TGATGATTCAGATAGTGGGA+TGG + chr2_4:5974303-5974322 Msa0311090:CDS 40.0%
! TGGATGATGATGCAATGTTC+AGG + chr2_4:5974323-5974342 Msa0311090:CDS 40.0%
! TGATGATGCAATGTTCAGGA+TGG + chr2_4:5974327-5974346 Msa0311090:CDS 40.0%
ACTCCGCATCCTTTCATTAT+TGG + chr2_4:5974432-5974451 Msa0311090:CDS 40.0%
GGAAGTAATGTATACTTGCC+TGG - chr2_4:5974478-5974497 None:intergenic 40.0%
GCACAAAAACTGGTAAACGA+CGG - chr2_4:5974499-5974518 None:intergenic 40.0%
CACAAAGCTAGCACAAAAAC+TGG - chr2_4:5974509-5974528 None:intergenic 40.0%
GTGGTTCACACACATACAAT+TGG - chr2_4:5974551-5974570 None:intergenic 40.0%
TATGTGTGTGAACCACAAAG+TGG + chr2_4:5974555-5974574 Msa0311090:intron 40.0%
GAAAGCAAAGGATCATCCAA+AGG + chr2_4:5974793-5974812 Msa0311090:CDS 40.0%
AATTGGACTTCATCACCCTT+TGG - chr2_4:5974812-5974831 None:intergenic 40.0%
ATCGACACTTGAATCTCTCT+TGG + chr2_4:5974832-5974851 Msa0311090:CDS 40.0%
! GCAGACTTTTGCTTCCTAAA+TGG - chr2_4:5974884-5974903 None:intergenic 40.0%
! AGCTGATTTCTTTGAGGGAT+TGG - chr2_4:5974909-5974928 None:intergenic 40.0%
! AAGGCAGCTGATTTCTTTGA+GGG - chr2_4:5974914-5974933 None:intergenic 40.0%
TTGAACAATCCTCTGCAGTT+CGG - chr2_4:5975023-5975042 None:intergenic 40.0%
!!! GGCTTTATTTTGGAGAGATG+TGG + chr2_4:5975154-5975173 Msa0311090:CDS 40.0%
! GAAGTGCCAAATCAGACTTT+CGG + chr2_4:5975176-5975195 Msa0311090:CDS 40.0%
CACCAACTCTTTCATAGCAT+GGG - chr2_4:5975314-5975333 None:intergenic 40.0%
TCACCAACTCTTTCATAGCA+TGG - chr2_4:5975315-5975334 None:intergenic 40.0%
AGTACGTAAGTTCTGTGTCA+AGG + chr2_4:5975369-5975388 Msa0311090:CDS 40.0%
TGGGGACTTATTTATGCCTT+CGG + chr2_4:5975638-5975657 Msa0311090:three_prime_UTR 40.0%
GACTTATTTATGCCTTCGGA+AGG + chr2_4:5975642-5975661 Msa0311090:three_prime_UTR 40.0%
ACCAAAAATTCACCTTCCGA+AGG - chr2_4:5975657-5975676 None:intergenic 40.0%
TGGGTGGTGCAAAACAATTA+CGG - chr2_4:5975817-5975836 None:intergenic 40.0%
!!! GGGGTTTTAGGGTTCAAAAG+AGG - chr2_4:5968247-5968266 None:intergenic 45.0%
TCCCAATGGGTAGCAAGAAA+AGG + chr2_4:5968291-5968310 Msa0311090:exon 45.0%
TCTACCAACATAGCCGAATC+CGG - chr2_4:5968494-5968513 None:intergenic 45.0%
TTGGTAGATTCAACTAGCGG+CGG + chr2_4:5968506-5968525 Msa0311090:CDS 45.0%
TCGTTGCCGGAGTTTCATAT+TGG + chr2_4:5968545-5968564 Msa0311090:CDS 45.0%
GGCGGTGAATGAATCGATTA+GGG + chr2_4:5968586-5968605 Msa0311090:CDS 45.0%
GGAAGTTCAGAAGGCTTATG+AGG + chr2_4:5968643-5968662 Msa0311090:CDS 45.0%
!! ATGGAGATTGATGGTGATGG+TGG + chr2_4:5968677-5968696 Msa0311090:CDS 45.0%
CGAACAGCATATCGAACAGA+AGG - chr2_4:5968749-5968768 None:intergenic 45.0%
!! GCTGTTCGTAGATTGATTCG+AGG + chr2_4:5968761-5968780 Msa0311090:CDS 45.0%
ATGTGTGCAAGTGTTCGAGA+GGG + chr2_4:5969052-5969071 Msa0311090:intron 45.0%
!! CTGGTGCTATCGACAAAATC+AGG + chr2_4:5969769-5969788 Msa0311090:CDS 45.0%
AAGCACCATATGCGAATAGG+CGG - chr2_4:5969967-5969986 None:intergenic 45.0%
! CCAAAGCACCATATGCGAAT+AGG - chr2_4:5969970-5969989 None:intergenic 45.0%
CCTATTCGCATATGGTGCTT+TGG + chr2_4:5969967-5969986 Msa0311090:CDS 45.0%
TCTCCCTTGCAAATAGGAAG+CGG + chr2_4:5970068-5970087 Msa0311090:CDS 45.0%
GTACCGCTTCCTATTTGCAA+GGG - chr2_4:5970074-5970093 None:intergenic 45.0%
AGTACCGCTTCCTATTTGCA+AGG - chr2_4:5970075-5970094 None:intergenic 45.0%
! ATCACACCATAGTGGGAAAC+AGG - chr2_4:5970202-5970221 None:intergenic 45.0%
GTTTCCCACTATGGTGTGAT+TGG + chr2_4:5970202-5970221 Msa0311090:intron 45.0%
CAAAGCCAATCACACCATAG+TGG - chr2_4:5970210-5970229 None:intergenic 45.0%
!! CACTATGGTGTGATTGGCTT+TGG + chr2_4:5970208-5970227 Msa0311090:intron 45.0%
ACAACATGCACGTAAGGAGA+GGG - chr2_4:5970324-5970343 None:intergenic 45.0%
GTGTTTGCATGAGTTTGTGG+GGG - chr2_4:5970354-5970373 None:intergenic 45.0%
CGTGTTTGCATGAGTTTGTG+GGG - chr2_4:5970355-5970374 None:intergenic 45.0%
CACGTGTTTGCATGAGTTTG+TGG - chr2_4:5970357-5970376 None:intergenic 45.0%
TGTTATTGAAGCTCCTGGAC+TGG + chr2_4:5970549-5970568 Msa0311090:CDS 45.0%
! TTGGTAGAGCTGAACGGATT+TGG - chr2_4:5970685-5970704 None:intergenic 45.0%
GTGATCGGCGGAGAAAAAAT+TGG - chr2_4:5970704-5970723 None:intergenic 45.0%
GGTCATGAGATGAGAAGAGA+AGG - chr2_4:5971052-5971071 None:intergenic 45.0%
CAAAGTTGTTCAGTGCCTGA+TGG + chr2_4:5971151-5971170 Msa0311090:CDS 45.0%
! GCTATACAGAAGCACAGCAA+TGG + chr2_4:5971284-5971303 Msa0311090:CDS 45.0%
GGATGAAGATAATGCCTTGG+AGG + chr2_4:5971415-5971434 Msa0311090:CDS 45.0%
TGAACAGCTGCAGTTGTTGT+TGG + chr2_4:5971751-5971770 Msa0311090:CDS 45.0%
GCAAATGCTCATAAGGGAGA+GGG + chr2_4:5971773-5971792 Msa0311090:CDS 45.0%
CAAATGCTCATAAGGGAGAG+GGG + chr2_4:5971774-5971793 Msa0311090:CDS 45.0%
TACGAACCCAGATCATTAGG+CGG - chr2_4:5971827-5971846 None:intergenic 45.0%
CTTCCGGTCTTTAGATGATG+AGG + chr2_4:5971895-5971914 Msa0311090:CDS 45.0%
GGAAGCTACATTATCCAGAG+AGG + chr2_4:5971949-5971968 Msa0311090:CDS 45.0%
TAGCCAATGCAAAGGCTAGA+TGG - chr2_4:5972113-5972132 None:intergenic 45.0%
ATGCCTACAACTCCTCGATT+TGG + chr2_4:5972165-5972184 Msa0311090:intron 45.0%
TGTCAAGTGAGCAGTGAAAC+GGG - chr2_4:5972338-5972357 None:intergenic 45.0%
!! GCCTTTTCTAGGAACTCACA+TGG + chr2_4:5972392-5972411 Msa0311090:intron 45.0%
! TGGTTTGGCTAGGGGATTAA+AGG - chr2_4:5972618-5972637 None:intergenic 45.0%
GAAGGACTTGTAAGAGCAAC+TGG - chr2_4:5972850-5972869 None:intergenic 45.0%
AGTACTCGCTTGGACAAAGA+AGG - chr2_4:5972868-5972887 None:intergenic 45.0%
GAGAAGATGATGCAGAGGTT+GGG + chr2_4:5972960-5972979 Msa0311090:CDS 45.0%
AGAAGATGATGCAGAGGTTG+GGG + chr2_4:5972961-5972980 Msa0311090:CDS 45.0%
TGATCAATAGCAGACCGCAT+AGG - chr2_4:5973052-5973071 None:intergenic 45.0%
TATGCGGTCTGCTATTGATC+AGG + chr2_4:5973051-5973070 Msa0311090:CDS 45.0%
ACTGCTATGAGTCTGATGTC+TGG + chr2_4:5973227-5973246 Msa0311090:intron 45.0%
CTGCTATGAGTCTGATGTCT+GGG + chr2_4:5973228-5973247 Msa0311090:intron 45.0%
TGCTATGAGTCTGATGTCTG+GGG + chr2_4:5973229-5973248 Msa0311090:intron 45.0%
TCAATTGGGCGAGTTCCAAA+AGG - chr2_4:5973395-5973414 None:intergenic 45.0%
! GTGCCTTTTCCCATAAGGTT+TGG + chr2_4:5973545-5973564 Msa0311090:intron 45.0%
CTGCCAAACCTTATGGGAAA+AGG - chr2_4:5973551-5973570 None:intergenic 45.0%
CATTCTGCTGCCAAACCTTA+TGG - chr2_4:5973558-5973577 None:intergenic 45.0%
GTAGTTGAGGCAGATGAAAC+TGG + chr2_4:5974259-5974278 Msa0311090:CDS 45.0%
ATGTTACACAGGTAAGCCTC+AGG + chr2_4:5974661-5974680 Msa0311090:intron 45.0%
GAGTACACAGTAAGAACCTG+AGG - chr2_4:5974680-5974699 None:intergenic 45.0%
! AGCAGTGTGTGGGTTAACAA+AGG - chr2_4:5974717-5974736 None:intergenic 45.0%
CACTAACTTCAGCAGTGTGT+GGG - chr2_4:5974727-5974746 None:intergenic 45.0%
TCACTAACTTCAGCAGTGTG+TGG - chr2_4:5974728-5974747 None:intergenic 45.0%
! CAAGGCAGCTGATTTCTTTG+AGG - chr2_4:5974915-5974934 None:intergenic 45.0%
AATACAGCATGGCCAATCCA+TGG - chr2_4:5975133-5975152 None:intergenic 45.0%
!! TGGATTGGCCATGCTGTATT+TGG + chr2_4:5975133-5975152 Msa0311090:CDS 45.0%
! CGAAGCACTTGAATTGGTGA+TGG + chr2_4:5975204-5975223 Msa0311090:CDS 45.0%
ATTCTTCCCTTCACCACTCT+CGG - chr2_4:5975251-5975270 None:intergenic 45.0%
CTCCCATGCTATGAAAGAGT+TGG + chr2_4:5975309-5975328 Msa0311090:CDS 45.0%
GACAAATATGCCGAGCAAAC+AGG + chr2_4:5975333-5975352 Msa0311090:CDS 45.0%
!! GCTGCTTTGGAAACACAACT+TGG + chr2_4:5975460-5975479 Msa0311090:CDS 45.0%
CTGCTATTACCCGAGTAAAG+AGG + chr2_4:5975539-5975558 Msa0311090:three_prime_UTR 45.0%
! GCCTTCGGAAGGTGAATTTT+TGG + chr2_4:5975653-5975672 Msa0311090:three_prime_UTR 45.0%
CACACATCACTCACTGCGTT+CGG + chr2_4:5968180-5968199 Msa0311090:five_prime_UTR 50.0%
CAAATCCGAACTTCCAGCTC+CGG + chr2_4:5968472-5968491 Msa0311090:CDS 50.0%
! TAGTGGTGGTGATTCGTTGC+CGG + chr2_4:5968532-5968551 Msa0311090:CDS 50.0%
CGGCGGTGAATGAATCGATT+AGG + chr2_4:5968585-5968604 Msa0311090:CDS 50.0%
TGAATCGATTAGGGAAGCGG+CGG + chr2_4:5968595-5968614 Msa0311090:CDS 50.0%
GTTCAGAAGGCTTATGAGGG+TGG + chr2_4:5968647-5968666 Msa0311090:CDS 50.0%
AAGGCTTATGAGGGTGGTCA+AGG + chr2_4:5968653-5968672 Msa0311090:CDS 50.0%
AGGCTTATGAGGGTGGTCAA+GGG + chr2_4:5968654-5968673 Msa0311090:CDS 50.0%
TTATGAGGGTGGTCAAGGGA+TGG + chr2_4:5968658-5968677 Msa0311090:CDS 50.0%
GGTCAAGGGATGGAGATTGA+TGG + chr2_4:5968668-5968687 Msa0311090:CDS 50.0%
!! GGGATGGAGATTGATGGTGA+TGG + chr2_4:5968674-5968693 Msa0311090:CDS 50.0%
CATGTGTGCAAGTGTTCGAG+AGG + chr2_4:5969051-5969070 Msa0311090:intron 50.0%
CAAGTGTTCGAGAGGGCTTA+TGG + chr2_4:5969059-5969078 Msa0311090:intron 50.0%
!! TGGGAAAATCGTCGGCTTGT+TGG + chr2_4:5969888-5969907 Msa0311090:intron 50.0%
!! GGGAAAATCGTCGGCTTGTT+GGG + chr2_4:5969889-5969908 Msa0311090:intron 50.0%
! TATGGTGCTTTGGCTCGATC+AGG + chr2_4:5969977-5969996 Msa0311090:CDS 50.0%
AACATGCACGTAAGGAGAGG+GGG - chr2_4:5970322-5970341 None:intergenic 50.0%
CAACATGCACGTAAGGAGAG+GGG - chr2_4:5970323-5970342 None:intergenic 50.0%
CACAACATGCACGTAAGGAG+AGG - chr2_4:5970325-5970344 None:intergenic 50.0%
GCATGCACAACATGCACGTA+AGG - chr2_4:5970330-5970349 None:intergenic 50.0%
TCAAACCACTTGTCCAGTCC+AGG - chr2_4:5970565-5970584 None:intergenic 50.0%
ACTCAGGAAGGAGAGGTGAT+CGG - chr2_4:5970719-5970738 None:intergenic 50.0%
AGCCTCGTGTTCACAGTGTT+TGG + chr2_4:5970859-5970878 Msa0311090:CDS 50.0%
GATGCCGCATCTTCCAATTG+TGG - chr2_4:5970921-5970940 None:intergenic 50.0%
CTGATCTGAAGGTTCCTCCA+AGG - chr2_4:5971432-5971451 None:intergenic 50.0%
GAACTCGTAACTTCTCGTCG+TGG - chr2_4:5971592-5971611 None:intergenic 50.0%
GGTCTGTTCACTGCATCTCT+TGG + chr2_4:5971644-5971663 Msa0311090:CDS 50.0%
GGCAAATGCTCATAAGGGAG+AGG + chr2_4:5971772-5971791 Msa0311090:CDS 50.0%
GTTGAGCCGCCTAATGATCT+GGG + chr2_4:5971818-5971837 Msa0311090:CDS 50.0%
GACCGGAAGAGAGAAACTGA+AGG - chr2_4:5971884-5971903 None:intergenic 50.0%
!! AGCTCACTTGGTTTGGCTAG+GGG - chr2_4:5972626-5972645 None:intergenic 50.0%
!! CAGCTCACTTGGTTTGGCTA+GGG - chr2_4:5972627-5972646 None:intergenic 50.0%
GTACATCATCACTGCAGTCG+TGG - chr2_4:5972796-5972815 None:intergenic 50.0%
ATCATCTTCTCCAGGGGACT+CGG - chr2_4:5972951-5972970 None:intergenic 50.0%
CTCTGCATCATCTTCTCCAG+GGG - chr2_4:5972957-5972976 None:intergenic 50.0%
CCTCTGCATCATCTTCTCCA+GGG - chr2_4:5972958-5972977 None:intergenic 50.0%
ACCTCTGCATCATCTTCTCC+AGG - chr2_4:5972959-5972978 None:intergenic 50.0%
GGAGAAGATGATGCAGAGGT+TGG + chr2_4:5972959-5972978 Msa0311090:CDS 50.0%
TGGGGATGCACCTGAATTGA+TGG + chr2_4:5972979-5972998 Msa0311090:CDS 50.0%
CACAGTCATCAGCTCCTATG+CGG + chr2_4:5973035-5973054 Msa0311090:CDS 50.0%
GTCTGATGTCTGGGGAAAGA+TGG + chr2_4:5973237-5973256 Msa0311090:intron 50.0%
ACCTGCAAGACATCCAGATG+CGG + chr2_4:5974111-5974130 Msa0311090:CDS 50.0%
CAAGCTGAGACTGGTGAAAC+AGG + chr2_4:5974202-5974221 Msa0311090:CDS 50.0%
GTGAAACAGGTGAGAGCGAT+GGG + chr2_4:5974215-5974234 Msa0311090:CDS 50.0%
CGACTCTGAGTCTGTAGTTG+AGG + chr2_4:5974246-5974265 Msa0311090:CDS 50.0%
TGAGGCAGATGAAACTGGTC+AGG + chr2_4:5974264-5974283 Msa0311090:CDS 50.0%
! TGTGTGGGTTAACAAAGGCG+CGG - chr2_4:5974712-5974731 None:intergenic 50.0%
GCAGCTCAGTCAGCGTATAT+CGG + chr2_4:5974748-5974767 Msa0311090:CDS 50.0%
CAGCTCAGTCAGCGTATATC+GGG + chr2_4:5974749-5974768 Msa0311090:CDS 50.0%
GACTCGCCGAAAGTCTGATT+TGG - chr2_4:5975185-5975204 None:intergenic 50.0%
! GCGAGTCGAAGCACTTGAAT+TGG + chr2_4:5975198-5975217 Msa0311090:CDS 50.0%
AAGTCACTAGCAACCGAGAG+TGG + chr2_4:5975235-5975254 Msa0311090:CDS 50.0%
TAGCAACCGAGAGTGGTGAA+GGG + chr2_4:5975242-5975261 Msa0311090:CDS 50.0%
GCTCTTCTTGCCTGTTTGCT+CGG - chr2_4:5975346-5975365 None:intergenic 50.0%
AGCAGCAACCCTATATGTCC+TGG - chr2_4:5975524-5975543 None:intergenic 50.0%
!! CACTGCGTTCGGCTTTGTTG+AGG + chr2_4:5968191-5968210 Msa0311090:five_prime_UTR 55.0%
CGGAGCTGGAAGTTCGGATT+TGG - chr2_4:5968474-5968493 None:intergenic 55.0%
CGAATCCGGAGCTGGAAGTT+CGG - chr2_4:5968480-5968499 None:intergenic 55.0%
CGAACTTCCAGCTCCGGATT+CGG + chr2_4:5968478-5968497 Msa0311090:CDS 55.0%
AACATAGCCGAATCCGGAGC+TGG - chr2_4:5968488-5968507 None:intergenic 55.0%
AGCTCCGGATTCGGCTATGT+TGG + chr2_4:5968487-5968506 Msa0311090:CDS 55.0%
GTAGATTCAACTAGCGGCGG+CGG + chr2_4:5968509-5968528 Msa0311090:CDS 55.0%
GGAAGCGGCGGTGAAACAAA+TGG + chr2_4:5968607-5968626 Msa0311090:CDS 55.0%
!! AGCTCTCTAGGGCCCTTGTT+TGG + chr2_4:5969133-5969152 Msa0311090:intron 55.0%
CGCATGCCTGTTTCCCACTA+TGG + chr2_4:5970193-5970212 Msa0311090:intron 55.0%
GGAGAGGGGGCAGAAATGTT+TGG - chr2_4:5970309-5970328 None:intergenic 55.0%
! AAGCTCCTGGACTGGACAAG+TGG + chr2_4:5970557-5970576 Msa0311090:CDS 55.0%
GTGAACACGAGGCTGACAGA+AGG - chr2_4:5970853-5970872 None:intergenic 55.0%
GGCCAAACACTGTGAACACG+AGG - chr2_4:5970864-5970883 None:intergenic 55.0%
CGTTGAGCCGCCTAATGATC+TGG + chr2_4:5971817-5971836 Msa0311090:CDS 55.0%
!! GCAGCTCACTTGGTTTGGCT+AGG - chr2_4:5972628-5972647 None:intergenic 55.0%
!! CACACATCAGGGTGTTGGGT+GGG - chr2_4:5972650-5972669 None:intergenic 55.0%
!! ACACACATCAGGGTGTTGGG+TGG - chr2_4:5972651-5972670 None:intergenic 55.0%
GCAGCTTCTGAGTACTCGCT+TGG - chr2_4:5972878-5972897 None:intergenic 55.0%
TCTGATATTCCCGAGTCCCC+TGG + chr2_4:5972938-5972957 Msa0311090:CDS 55.0%
TCATCTTCTCCAGGGGACTC+GGG - chr2_4:5972950-5972969 None:intergenic 55.0%
CCCTGGAGAAGATGATGCAG+AGG + chr2_4:5972955-5972974 Msa0311090:CDS 55.0%
CGCATAGGAGCTGATGACTG+TGG - chr2_4:5973037-5973056 None:intergenic 55.0%
!! TCACCGATGATGGGCTGATG+CGG + chr2_4:5974059-5974078 Msa0311090:CDS 55.0%
CATCCGCATCAGCCCATCAT+CGG - chr2_4:5974065-5974084 None:intergenic 55.0%
CCTGCAAGACATCCAGATGC+GGG + chr2_4:5974112-5974131 Msa0311090:CDS 55.0%
TCATCTGCACTTCCCGCATC+TGG - chr2_4:5974127-5974146 None:intergenic 55.0%
GGTGAAACAGGTGAGAGCGA+TGG + chr2_4:5974214-5974233 Msa0311090:CDS 55.0%
! GTGTGGGTTAACAAAGGCGC+GGG - chr2_4:5974711-5974730 None:intergenic 55.0%
CTAGCAACCGAGAGTGGTGA+AGG + chr2_4:5975241-5975260 Msa0311090:CDS 55.0%
TCCTGAGGCTCAAGCTGCTT+TGG + chr2_4:5975447-5975466 Msa0311090:CDS 55.0%
TCCAAAGCAGCTTGAGCCTC+AGG - chr2_4:5975451-5975470 None:intergenic 55.0%
CTCTTGCAGTGTGCGCGACA+GGG + chr2_4:5969720-5969739 Msa0311090:intron 60.0%
! GCGCGACAGGGTTTTGCTCT+AGG + chr2_4:5969732-5969751 Msa0311090:CDS 60.0%
CTGGGCCGCCTATTCGCATA+TGG + chr2_4:5969959-5969978 Msa0311090:CDS 60.0%
CAGGAAGGAGAGGTGATCGG+CGG - chr2_4:5970716-5970735 None:intergenic 60.0%
ACGACATCAGCCGAAGGACG+TGG - chr2_4:5971800-5971819 None:intergenic 60.0%
GGCTCAACGACATCAGCCGA+AGG - chr2_4:5971806-5971825 None:intergenic 60.0%
GGTGGGCAGCTCACTTGGTT+TGG - chr2_4:5972633-5972652 None:intergenic 60.0%
TGTTGGGTGGGCAGCTCACT+TGG - chr2_4:5972638-5972657 None:intergenic 60.0%
!! TCTCTGCGGCACTGATGAGC+AGG + chr2_4:5972763-5972782 Msa0311090:intron 60.0%
!! GCGGCACTGATGAGCAGGAA+AGG + chr2_4:5972768-5972787 Msa0311090:intron 60.0%
CCCGCATCTGGATGTCTTGC+AGG - chr2_4:5974115-5974134 None:intergenic 60.0%
TTGCGGAGTCCGAACTGCAG+AGG + chr2_4:5975011-5975030 Msa0311090:CDS 60.0%
TCAACTAGCGGCGGCGGTAG+TGG + chr2_4:5968515-5968534 Msa0311090:CDS 65.0%
GCTCTTGCAGTGTGCGCGAC+AGG + chr2_4:5969719-5969738 Msa0311090:intron 65.0%
! ACTAGCGGCGGCGGTAGTGG+TGG + chr2_4:5968518-5968537 Msa0311090:CDS 70.0%
GGGAGAGGGGCCACGTCCTT+CGG + chr2_4:5971787-5971806 Msa0311090:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 5968178 5975897 5968178 ID=Msa0311090;Name=Msa0311090
chr2_4 mRNA 5968178 5975897 5968178 ID=Msa0311090-mRNA-1;Parent=Msa0311090;Name=Msa0311090-mRNA-1;_AED=0.01;_eAED=0.01;_QI=118|0.85|0.87|1|1|1|8|378|1280
chr2_4 exon 5968178 5968802 5968178 ID=Msa0311090-mRNA-1:exon:2230;Parent=Msa0311090-mRNA-1
chr2_4 exon 5969729 5969854 5969729 ID=Msa0311090-mRNA-1:exon:2231;Parent=Msa0311090-mRNA-1
chr2_4 exon 5969941 5970138 5969941 ID=Msa0311090-mRNA-1:exon:2232;Parent=Msa0311090-mRNA-1
chr2_4 exon 5970523 5970750 5970523 ID=Msa0311090-mRNA-1:exon:2233;Parent=Msa0311090-mRNA-1
chr2_4 exon 5970843 5971970 5970843 ID=Msa0311090-mRNA-1:exon:2234;Parent=Msa0311090-mRNA-1
chr2_4 exon 5972785 5973072 5972785 ID=Msa0311090-mRNA-1:exon:2235;Parent=Msa0311090-mRNA-1
chr2_4 exon 5974034 5974553 5974034 ID=Msa0311090-mRNA-1:exon:2236;Parent=Msa0311090-mRNA-1
chr2_4 exon 5974672 5975897 5974672 ID=Msa0311090-mRNA-1:exon:2237;Parent=Msa0311090-mRNA-1
chr2_4 five_prime_UTR 5968178 5968295 5968178 ID=Msa0311090-mRNA-1:five_prime_utr;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5968296 5968802 5968296 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5969729 5969854 5969729 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5969941 5970138 5969941 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5970523 5970750 5970523 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5970843 5971970 5970843 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5972785 5973072 5972785 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5974034 5974553 5974034 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 CDS 5974672 5975519 5974672 ID=Msa0311090-mRNA-1:cds;Parent=Msa0311090-mRNA-1
chr2_4 three_prime_UTR 5975520 5975897 5975520 ID=Msa0311090-mRNA-1:three_prime_utr;Parent=Msa0311090-mRNA-1
Gene Sequence

>Msa0311090

ATGGGTAGCAAGAAAAGGAACAACGCCATAGAATCTCAAGAAAAAGAACCTCTCAATAAAAAATTTAAGAACAACGATGATTCTATCGCTACACCATCTTCAACCAAACCAACAATGGAAAATCATAAGAAAAGCAAAGCATTCGATAAACAAAGACGCAGCGCCAAATCCAAATCCAAATCCGAACTTCCAGCTCCGGATTCGGCTATGTTGGTAGATTCAACTAGCGGCGGCGGTAGTGGTGGTGATTCGTTGCCGGAGTTTCATATTGGTGTGTTTAAGGATTTAGCGGCGGTGAATGAATCGATTAGGGAAGCGGCGGTGAAACAAATGGTGAATGAGTTGAAGGAAGTTCAGAAGGCTTATGAGGGTGGTCAAGGGATGGAGATTGATGGTGATGGTGGTTTTAAGCTTGAAGCTGAGAAAAATGATGGGTTGGATGAATGTGCTCCTTCTGTTCGATATGCTGTTCGTAGATTGATTCGAGGTGTTTCTTCTTCAAGAGAGTGTGCGCGACAGGGTTTTGCTCTAGGTTTAACACTTTTAGCTGGTGCTATCGACAAAATCAGGGTTGACTCGTTCCTTAAACTCGTAGTAGATTTATTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTCTTCTGGGCCGCCTATTCGCATATGGTGCTTTGGCTCGATCAGGAAGACTTATCCATGAATGGAGCAATGATAAAAATACTCCATACATCAAAGAATTTGTCGGTATACTTATCTCCCTTGCAAATAGGAAGCGGTACTTGCAAGAACCTGCCGTCTCAATAATTTTATACTTGGTTGAAAAGTTGCCTGTTGAAGCATTAGCGAATCATGTTATTGAAGCTCCTGGACTGGACAAGTGGTTTGAATCTGCTGCAGAAGTTGGAAATCCTGATGCTCTATTCCTTGCTTTAAAAGTTCGAGAGAAAATTTCTACAGACAGTTCCATTTATGGCAAACTACTACCAAATCCGTTCAGCTCTACCAATTTTTTCTCCGCCGATCACCTCTCCTTCCTGAGTAATTGTTTGAAGGAATCAACCTTCTGTCAGCCTCGTGTTCACAGTGTTTGGCCTGTTTTGATAAATATTCTTATACCCAATACTGTTCCACAATTGGAAGATGCGGCATCAGCTTCAAATTCATTAAAGAAACATAAGAAGAGTAGAAAATCTTGCTCTTCTGATGAAGAAATTGCGAAGAATCTCAAGTCTTTTTGTGAAATTATTATTGAAGGATCCCTTCTCTTCTCATCTCATGACCGTAAGCACTTAGCTTTCGATGTTATGTTTCTTCTTCTTCAAAAACTGTCTGCATCTTTAGTTCCAGTTGTTCTGTCAAACAAAGTTGTTCAGTGCCTGATGGATATACTATCAACCAACAACACATGGCTATATAAAGTTGGAAAACATTTTCTTAAACAATTGTCAGATTGGGTGGGTGACGATGATGTCAAAAGAGTTGCTGTTATAGTGGCTATACAGAAGCACAGCAATGGAAAATTTGACTGTATCACAAGGACAAAGCATGTTAAAGATTTGATGTCACAATTCAAAACAGAACCCGGTTGCATGCTTTTTATTCAAAATTTGATGAACCTGTTTGTGGATGAAGATAATGCCTTGGAGGAACCTTCAGATCAGAGTCAAACAACAGACGAAAATTCTGAAATAGGCTCTATTGAGGATAAAGAATCTCCTAGGACTAATGGGAATTCTGACTTTTTGAAGAGTTGGGTTATAGAATCTCTTCCTGGTATTTTGAAATTCTTAAAGCTGGACCACGACGAGAAGTTACGAGTTCAAAAGGAAATAATGAAGTTTATGGCTGTTCAGGGTCTGTTCACTGCATCTCTTGGCACTGAAGTGACTTCATTTGAGTTGGACGAGAAATTTAGGTGGCCAAAATCTCCCACATCAAATGCTCTTTGCAAGTTGTGTATTGAACAGCTGCAGTTGTTGTTGGCAAATGCTCATAAGGGAGAGGGGCCACGTCCTTCGGCTGATGTCGTTGAGCCGCCTAATGATCTGGGTTCGTACTTCATGAAATTCTTCAGCACCTTATGCAATATTCCTTCAGTTTCTCTCTTCCGGTCTTTAGATGATGAGGATGACAAAGCAGTAAAAGATTTGCAAGCAATGGAAGCTACATTATCCAGAGAGGAAAGGAGCCACGACTGCAGTGATGATGTACATAGAGATCATGCACTGAGATACTTGCTTATCCAGTTGCTCTTACAAGTCCTTCTTTGTCCAAGCGAGTACTCAGAAGCTGCGTCTGAACTCATCATCTGTTGTAAGAAAACATTTTCTACTTCTGATATTCCCGAGTCCCCTGGAGAAGATGATGCAGAGGTTGGGGATGCACCTGAATTGATGGATGTTCTTGTGGATACATTGCTCTCTCTGCTTCCACAGTCATCAGCTCCTATGCGGTCTGCTATTGATCAGGTGTTCAAATGCTTTTGCAATGATATCACCGATGATGGGCTGATGCGGATGTTGCGAGTCATAAAGAAAAATTTAAAACCTGCAAGACATCCAGATGCGGGAAGTGCAGATGAAGATGACGACGATGAAGATGATGACTTATTCAATATTGAAGATGAAGAAATTGATCAAGCTGAGACTGGTGAAACAGGTGAGAGCGATGGGCAGACTGACGACTCTGAGTCTGTAGTTGAGGCAGATGAAACTGGTCAGGACCACCCTGAAGATTCTGATGATTCAGATAGTGGGATGGATGATGATGCAATGTTCAGGATGGATACATATCTTGCTCAGATTTTCAAAGAGAAGAAAAGTCAGTCTGGAAGTGAAACTGCTCATTCCCAACTTTTGTTGTTCAAACTCCGCATCCTTTCATTATTGGAAATTTTTGTTCATGAAAATCCAGGCAAGTATACATTACTTCCGTCGTTTACCAGTTTTTGTGCTAGCTTTGTGTCTGTTATTATACTATTCTCCAATTGTAAGCCTCAGGTTCTTACTGTGTACTCACATTTGGCCCGCGCCTTTGTTAACCCACACACTGCTGAAGTTAGTGAGCAGCTCAGTCAGCGTATATCGGGAATATTGCAGAAGAAAATATTGAAAGCAAAGGATCATCCAAAGGGTGATGAAGTCCAATTATCGACACTTGAATCTCTCTTGGAGAGAAATTTGAAACTAGCATCAAAACCATTTAGGAAGCAAAAGTCTGCAACCAATCCCTCAAAGAAATCAGCTGCCTTGAACCGATATAAAATGGTTTCTTCCTTTGCCCAAAATTCTTCCTTTTGGATTTTGAAAATTGTCGATTCAAGAAATTTTGCGGAGTCCGAACTGCAGAGGATTGTTCAAATTTTCCAGAAAATATTGGTGGATTATTTTGACAGTAAGAAGTCTCAAGTAAAAGCTGCATTTTTAAAAGAAATATTTAAAAGAAGACCATGGATTGGCCATGCTGTATTTGGCTTTATTTTGGAGAGATGTGGAAGTGCCAAATCAGACTTTCGGCGAGTCGAAGCACTTGAATTGGTGATGGAAATATTGAAGTCACTAGCAACCGAGAGTGGTGAAGGGAAGAATTCATCGAAAAAAATTGTTAAAAGCAATTTAGATAAAATCTCCCATGCTATGAAAGAGTTGGTGACAAATATGCCGAGCAAACAGGCAAGAAGAGCAGAAGTACGTAAGTTCTGTGTCAAGGTCTTTGAGATCTTGTCGAAGCACAACCTCACCAAGTATCTTCTTAAAACATTGACTCCTGAGGCTCAAGCTGCTTTGGAAACACAACTTGGTGAGAAATTCCTTTGTTTGAAGAAACTGGAAAAATGA
Protein sequence

>Msa0311090

MGSKKRNNAIESQEKEPLNKKFKNNDDSIATPSSTKPTMENHKKSKAFDKQRRSAKSKSKSELPAPDSAMLVDSTSGGGSGGDSLPEFHIGVFKDLAAVNESIREAAVKQMVNELKEVQKAYEGGQGMEIDGDGGFKLEAEKNDGLDECAPSVRYAVRRLIRGVSSSRECARQGFALGLTLLAGAIDKIRVDSFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLIHEWSNDKNTPYIKEFVGILISLANRKRYLQEPAVSIILYLVEKLPVEALANHVIEAPGLDKWFESAAEVGNPDALFLALKVREKISTDSSIYGKLLPNPFSSTNFFSADHLSFLSNCLKESTFCQPRVHSVWPVLINILIPNTVPQLEDAASASNSLKKHKKSRKSCSSDEEIAKNLKSFCEIIIEGSLLFSSHDRKHLAFDVMFLLLQKLSASLVPVVLSNKVVQCLMDILSTNNTWLYKVGKHFLKQLSDWVGDDDVKRVAVIVAIQKHSNGKFDCITRTKHVKDLMSQFKTEPGCMLFIQNLMNLFVDEDNALEEPSDQSQTTDENSEIGSIEDKESPRTNGNSDFLKSWVIESLPGILKFLKLDHDEKLRVQKEIMKFMAVQGLFTASLGTEVTSFELDEKFRWPKSPTSNALCKLCIEQLQLLLANAHKGEGPRPSADVVEPPNDLGSYFMKFFSTLCNIPSVSLFRSLDDEDDKAVKDLQAMEATLSREERSHDCSDDVHRDHALRYLLIQLLLQVLLCPSEYSEAASELIICCKKTFSTSDIPESPGEDDAEVGDAPELMDVLVDTLLSLLPQSSAPMRSAIDQVFKCFCNDITDDGLMRMLRVIKKNLKPARHPDAGSADEDDDDEDDDLFNIEDEEIDQAETGETGESDGQTDDSESVVEADETGQDHPEDSDDSDSGMDDDAMFRMDTYLAQIFKEKKSQSGSETAHSQLLLFKLRILSLLEIFVHENPGKYTLLPSFTSFCASFVSVIILFSNCKPQVLTVYSHLARAFVNPHTAEVSEQLSQRISGILQKKILKAKDHPKGDEVQLSTLESLLERNLKLASKPFRKQKSATNPSKKSAALNRYKMVSSFAQNSSFWILKIVDSRNFAESELQRIVQIFQKILVDYFDSKKSQVKAAFLKEIFKRRPWIGHAVFGFILERCGSAKSDFRRVEALELVMEILKSLATESGEGKNSSKKIVKSNLDKISHAMKELVTNMPSKQARRAEVRKFCVKVFEILSKHNLTKYLLKTLTPEAQAALETQLGEKFLCLKKLEK*