AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0272010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272010 MtrunA17_Chr2g0279931 95.557 1283 29 3 1 1280 1 1258 0.0 2484
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0272010 AT5G64420.1 56.583 1276 498 9 33 1279 57 1305 0.0 1283

Find 279 sgRNAs with CRISPR-Local

Find 499 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCCGCATCCTTTCATTAT+TGG 0.108234 2_3:-3503680 Msa0272010:CDS
TGCTGTATTTGGCTTTATTT+TGG 0.128918 2_3:-3502968 Msa0272010:CDS
CTACCCATTGGGATTGAATT+TGG 0.140626 2_3:+3509501 None:intergenic
TCTACAGACAGTTCCATTTA+TGG 0.143885 2_3:-3507165 Msa0272010:CDS
GCATTTGATGTGGGAGATTT+TGG 0.150780 2_3:+3506104 None:intergenic
AAATCCAAAAGGAAGAATTT+TGG 0.171453 2_3:+3503148 None:intergenic
TACATTATTTCAGTTTATTC+TGG 0.174410 2_3:+3502277 None:intergenic
AAAGGAAATAATGAAGTTTA+TGG 0.180478 2_3:-3506201 Msa0272010:CDS
GAAGCTTCAAAATTCATTTA+AGG 0.186472 2_3:-3502496 Msa0272010:three_prime_UTR
TAAACTCGTAGTAGATTTAT+TGG 0.186853 2_3:-3508008 Msa0272010:CDS
ATAAATCTACTACGAGTTTA+AGG 0.201598 2_3:+3508011 None:intergenic
TGGTAGTAGTTTGCCATAAA+TGG 0.204218 2_3:+3507152 None:intergenic
GTTTCATATTGGTGTGTTTA+AGG 0.207989 2_3:-3509226 Msa0272010:CDS
CCCGCATCTGGATGTCTTGC+AGG 0.208201 2_3:+3504000 None:intergenic
TTGCCCAAAATTCTTCCTTT+TGG 0.208711 2_3:-3503152 Msa0272010:CDS
TTGAGTTGGACGAGAAATTT+AGG 0.244796 2_3:-3506130 Msa0272010:CDS
CGGAGCTGGAAGTTCGGATT+TGG 0.249234 2_3:+3509311 None:intergenic
TGCCTTGAACCGATATAAAA+TGG 0.254681 2_3:-3503184 Msa0272010:CDS
AATGAAGTTTATGGCTGTTC+AGG 0.254880 2_3:-3506192 Msa0272010:CDS
ATTCCTTTGTTTGAAGAAAC+TGG 0.256200 2_3:-3502623 Msa0272010:CDS
TGGATTGGCCATGCTGTATT+TGG 0.268961 2_3:-3502979 Msa0272010:CDS
TTCCTTCAGTTTCTCTCTTC+CGG 0.279221 2_3:-3505935 Msa0272010:CDS
GAGATTCAAGTGTCGATAAT+TGG 0.285987 2_3:+3503286 None:intergenic
ACAGACGAAAATTCTGAAAT+AGG 0.294275 2_3:-3506353 Msa0272010:CDS
TCCAATTGTGGAACAGTATT+GGG 0.296061 2_3:+3506908 None:intergenic
CGTTGAGCCGCCTAATGATC+TGG 0.304974 2_3:-3505997 Msa0272010:CDS
TTGGTAGAGCTGAACGGATT+TGG 0.321158 2_3:+3507132 None:intergenic
AACTAGCATCAAAACCATTT+AGG 0.324731 2_3:-3503245 Msa0272010:CDS
TCCTGAGGCTCAAGCTGCTT+TGG 0.324924 2_3:-3502665 Msa0272010:CDS
TTCTTTATCTTGAGATTCTA+TGG 0.334670 2_3:+3509461 None:intergenic
AGCTGATTTCTTTGAGGGAT+TGG 0.334746 2_3:+3503206 None:intergenic
TTCTTAAACAATTGTCAGAT+TGG 0.335380 2_3:-3506592 Msa0272010:CDS
TTCGGATTTGGATTTGGATT+TGG 0.336489 2_3:+3509323 None:intergenic
TACCCATTGGGATTGAATTT+GGG 0.339506 2_3:+3509502 None:intergenic
TCTGAATCATCAGAATCTTC+AGG 0.341427 2_3:+3503820 None:intergenic
TACGGTAGAAAATGTGATTT+CGG 0.341452 2_3:+3502315 None:intergenic
CTGGTGCTATCGACAAAATC+AGG 0.343136 2_3:-3508045 Msa0272010:CDS
GCTCTTGCAGTGTGCGCGAC+AGG 0.343666 2_3:-3508095 Msa0272010:intron
CCTATTCGCATATGGTGCTT+TGG 0.344339 2_3:-3507847 Msa0272010:CDS
GCTCTTCTTGCCTGTTTGCT+TGG 0.345913 2_3:+3502769 None:intergenic
TCTTACTGTGTACTCACATT+TGG 0.348622 2_3:-3503427 Msa0272010:CDS
TCATCTGCACTTCCCGCATC+TGG 0.348902 2_3:+3503988 None:intergenic
CTTCCTGAGTAATTGTTTGA+AGG 0.360884 2_3:-3507085 Msa0272010:intron
ACCCAATACTGTTCCACAAT+TGG 0.365522 2_3:-3506909 Msa0272010:CDS
AAAGAATCTCCTAGGACTAA+TGG 0.365603 2_3:-3506317 Msa0272010:CDS
TGGAAGTTCGGATTTGGATT+TGG 0.366954 2_3:+3509317 None:intergenic
CGGCGGTGAATGAATCGATT+AGG 0.368057 2_3:-3509197 Msa0272010:CDS
GAAGGACTTGTAAGAGCAAC+TGG 0.370111 2_3:+3505154 None:intergenic
CCGACAAATTCTTTGATGTA+TGG 0.378528 2_3:+3507777 None:intergenic
GACTCGCCGAAAGTCTGATT+TGG 0.381818 2_3:+3502930 None:intergenic
TGCAATGATATCACCGATGA+TGG 0.384725 2_3:-3504063 Msa0272010:CDS
ATCATCTTCTCCAGGGGACT+CGG 0.388710 2_3:+3505053 None:intergenic
AGCTCCGGATTCGGCTATAT+TGG 0.391499 2_3:-3509295 Msa0272010:CDS
CTCTTGCAGTGTGCGCGACA+GGG 0.392256 2_3:-3508094 Msa0272010:intron
TCCAAAGCAGCTTGAGCCTC+AGG 0.392723 2_3:+3502664 None:intergenic
AAGAATCTCCTAGGACTAAT+GGG 0.392912 2_3:-3506316 Msa0272010:CDS
GGAAGCAAAAGATTGTCTTC+TGG 0.393079 2_3:-3507874 Msa0272010:CDS
ACTTTGTTTGACAGAACAAC+TGG 0.395748 2_3:+3506680 None:intergenic
TTCCAATTGTGGAACAGTAT+TGG 0.400668 2_3:+3506907 None:intergenic
GTTGTTGGCAAATGCTCATA+AGG 0.401304 2_3:-3506048 Msa0272010:CDS
AGCCTCGTGTTCACAGTGTT+TGG 0.402114 2_3:-3506955 Msa0272010:CDS
ACATTATTTCAGTTTATTCT+GGG 0.403393 2_3:+3502278 None:intergenic
GAAGCAAAAGATTGTCTTCT+GGG 0.403903 2_3:-3507873 Msa0272010:CDS
TCTTAAACAATTGTCAGATT+GGG 0.407131 2_3:-3506591 Msa0272010:CDS
TTTATATAGCCATGTGTTGT+TGG 0.407224 2_3:+3506628 None:intergenic
CAAGGCAGCTGATTTCTTTG+AGG 0.408677 2_3:+3503200 None:intergenic
ATAAGAATATTTATCAAAAC+AGG 0.410894 2_3:+3506932 None:intergenic
TAGTGGTGGTGATTCGTTGC+CGG 0.412588 2_3:-3509250 Msa0272010:CDS
TACTTATCTCCCTTGCAAAT+AGG 0.412858 2_3:-3507752 Msa0272010:CDS
GCGAGTCGAAGCACTTGAAT+TGG 0.414700 2_3:-3502914 Msa0272010:CDS
AAAGCAAGGAATAGAGCATC+AGG 0.414753 2_3:+3507207 None:intergenic
AATTGGACTTCATCACCCTT+TGG 0.414789 2_3:+3503303 None:intergenic
GAGAAGATGATGCAGAGGTT+GGG 0.415139 2_3:-3505041 Msa0272010:CDS
GGCGGTGAATGAATCGATTA+GGG 0.415824 2_3:-3509196 Msa0272010:CDS
GACAAATATGCCAAGCAAAC+AGG 0.416463 2_3:-3502779 Msa0272010:CDS
GGGAGAGGGGCCACGTCCTT+CGG 0.417055 2_3:-3506027 Msa0272010:CDS
GATTCTGATGATTCAGATAG+TGG 0.417094 2_3:-3503814 Msa0272010:CDS
AAGTACGAACCCAGATCATT+AGG 0.417639 2_3:+3505987 None:intergenic
ACCTCTGCATCATCTTCTCC+AGG 0.418263 2_3:+3505045 None:intergenic
GCAGCTCAGTCAGCGTATAT+CGG 0.418294 2_3:-3503364 Msa0272010:CDS
CTGGGCCGCCTATTCGCATA+TGG 0.421484 2_3:-3507855 Msa0272010:CDS
GGAAGTTCAGAAGGCTTATG+AGG 0.421556 2_3:-3509139 Msa0272010:CDS
TGGGTTATAGAATCTCTTCC+TGG 0.424403 2_3:-3506272 Msa0272010:CDS
AAGGCAGCTGATTTCTTTGA+GGG 0.429594 2_3:+3503201 None:intergenic
CCAAAGCACCATATGCGAAT+AGG 0.434100 2_3:+3507847 None:intergenic
TCGTTGCCGGAGTTTCATAT+TGG 0.435279 2_3:-3509237 Msa0272010:CDS
CACACATCACTCACTGCGTT+CGG 0.435819 2_3:-3509602 Msa0272010:five_prime_UTR
ATTGTTGGTTTGGTTGAAGA+TGG 0.436653 2_3:+3509393 None:intergenic
ATCGACACTTGAATCTCTCT+TGG 0.440706 2_3:-3503280 Msa0272010:CDS
CCAAAGCATAAATACCTCTC+TGG 0.441278 2_3:+3505851 None:intergenic
CAAGCTGAGACTGGTGAAAC+AGG 0.441508 2_3:-3503910 Msa0272010:CDS
TGAACAGCTGCAGTTGTTGT+TGG 0.442984 2_3:-3506063 Msa0272010:CDS
AAATTTGATGAACCTGTTTG+TGG 0.444596 2_3:-3506420 Msa0272010:CDS
AAAGAGAAGAAAAGTCAGTC+TGG 0.445191 2_3:-3503739 Msa0272010:CDS
TGATTCGCTAATGCTTCAAC+AGG 0.446357 2_3:+3507288 None:intergenic
GGAAGTAACTTCATCAATGA+AGG 0.447215 2_3:-3507987 Msa0272010:CDS
GTAGTTGAGGCAGATGAAAC+TGG 0.447442 2_3:-3503853 Msa0272010:CDS
TGGGGACTTATTTATGCCTT+CGG 0.447951 2_3:-3502473 Msa0272010:three_prime_UTR
CATTATCTTCATCCACAAAC+AGG 0.448918 2_3:+3506408 None:intergenic
GGTCTGTTCACTGCATCTCT+TGG 0.449608 2_3:-3506170 Msa0272010:CDS
TCAACTAGCGGCGGCGGTAG+TGG 0.449628 2_3:-3509267 Msa0272010:CDS
TTCAAAATTCATTTAAGGTG+GGG 0.455724 2_3:-3502491 Msa0272010:three_prime_UTR
TGGGGATGCACCTGAATTGA+TGG 0.458302 2_3:-3505022 Msa0272010:CDS
ACAAGAACATCCATCAATTC+AGG 0.458388 2_3:+3505012 None:intergenic
CAGCTCAGTCAGCGTATATC+GGG 0.458624 2_3:-3503363 Msa0272010:CDS
GTTGTTTGACTCTGATCTGA+AGG 0.458674 2_3:+3506374 None:intergenic
TGAAGTGACTTCATTTGAGT+TGG 0.462021 2_3:-3506144 Msa0272010:CDS
AAAATGAACCAGGACATATA+GGG 0.462437 2_3:-3502599 Msa0272010:exon
TATGGTGCTTTGGCTCGATC+AGG 0.468033 2_3:-3507837 Msa0272010:CDS
GAGTTTGAACAGCAAAAGTT+GGG 0.470843 2_3:+3503699 None:intergenic
CGAGAAGTTACGAGTTCAAA+AGG 0.471599 2_3:-3506219 Msa0272010:CDS
GGAGTTTGAACAGCAAAAGT+TGG 0.474644 2_3:+3503698 None:intergenic
ATTCTTCCCTTCACCACTCT+CGG 0.476182 2_3:+3502864 None:intergenic
CAAAAGAGTTGCTGTTATAG+TGG 0.477088 2_3:-3506552 Msa0272010:CDS
TATAAAATTATTGAGACGGC+AGG 0.477862 2_3:+3507711 None:intergenic
TGGATGATGATGCAATGTTC+AGG 0.478667 2_3:-3503789 Msa0272010:CDS
CACTGCGTTCGGCTTTGTTG+AGG 0.480452 2_3:-3509591 Msa0272010:five_prime_UTR
TTGAACAATCCTCTGCAGTT+CGG 0.481594 2_3:+3503092 None:intergenic
GGCAAATGCTCATAAGGGAG+AGG 0.486456 2_3:-3506042 Msa0272010:CDS
GGTCAAGGGATGGAGATTGA+TGG 0.487783 2_3:-3509114 Msa0272010:CDS
TTTGAATCTGCTGCAGAAGT+TGG 0.488189 2_3:-3507234 Msa0272010:CDS
CTTCAAAATTCATTTAAGGT+GGG 0.488212 2_3:-3502492 Msa0272010:three_prime_UTR
CATCGAAAGCTAAGTGCTTA+CGG 0.488573 2_3:+3506744 None:intergenic
TATGCGGTCTGCTATTGATC+AGG 0.490512 2_3:-3504950 Msa0272010:intron
TCCCAATGGGTAGCAAGAAA+AGG 0.490679 2_3:-3509491 Msa0272010:exon
CGAACTTCCAGCTCCGGATT+CGG 0.490726 2_3:-3509304 Msa0272010:CDS
AACACATGGCTATATAAAGT+TGG 0.490755 2_3:-3506623 Msa0272010:CDS
CGAATCCGGAGCTGGAAGTT+CGG 0.490766 2_3:+3509305 None:intergenic
ATGAAGTTTATGGCTGTTCA+GGG 0.491134 2_3:-3506191 Msa0272010:CDS
AACTTCATCAATGAAGGGTC+AGG 0.494749 2_3:-3507981 Msa0272010:intron
TAAACAATTGTCAGATTGGG+TGG 0.495021 2_3:-3506588 Msa0272010:CDS
CAAATCCGAACTTCCAGCTC+CGG 0.497690 2_3:-3509310 Msa0272010:CDS
TGCTATTACCCGAGTAAAAG+AGG 0.500586 2_3:-3502572 Msa0272010:three_prime_UTR
GGAGAAGATGATGCAGAGGT+TGG 0.500648 2_3:-3505042 Msa0272010:CDS
CCATACATCAAAGAATTTGT+CGG 0.502813 2_3:-3507777 Msa0272010:CDS
TCACCAACTCTTTCATAGCA+TGG 0.505036 2_3:+3502800 None:intergenic
CTGAATCATCAGAATCTTCA+GGG 0.505240 2_3:+3503821 None:intergenic
TCAAACCACTTGTCCAGTCC+AGG 0.506758 2_3:+3507252 None:intergenic
TGGTGTGTTTAAGGATTTAG+CGG 0.508774 2_3:-3509217 Msa0272010:CDS
ATCCCAAATTCAATCCCAAT+GGG 0.510673 2_3:-3509504 Msa0272010:exon
TGTTATTGAAGCTCCTGGAC+TGG 0.511530 2_3:-3507265 Msa0272010:CDS
TGAGGCAGATGAAACTGGTC+AGG 0.511569 2_3:-3503848 Msa0272010:CDS
AACTGAAGGAATATTGCATA+AGG 0.511631 2_3:+3505947 None:intergenic
CACCAACTCTTTCATAGCAT+GGG 0.511792 2_3:+3502801 None:intergenic
TCTGATATTCCCGAGTCCCC+TGG 0.513649 2_3:-3505063 Msa0272010:CDS
GCTTCAAAATTCATTTAAGG+TGG 0.515192 2_3:-3502493 Msa0272010:three_prime_UTR
TCATCTTCTCCAGGGGACTC+GGG 0.515831 2_3:+3505054 None:intergenic
TCAGAATTCCCATTAGTCCT+AGG 0.515926 2_3:+3506308 None:intergenic
CAGGAAGACTTATCCATGAA+TGG 0.517068 2_3:-3507818 Msa0272010:CDS
GGAAGTAATGTATACTTGCC+TGG 0.517844 2_3:+3503637 None:intergenic
TTTAAAAGAAGACCATGGAT+TGG 0.519670 2_3:-3502994 Msa0272010:CDS
GAATGAATCGATTAGGGAAG+CGG 0.520234 2_3:-3509190 Msa0272010:CDS
AAGGCTTATGAGGGTGGTCA+AGG 0.520680 2_3:-3509129 Msa0272010:CDS
AATCATGTTATTGAAGCTCC+TGG 0.521109 2_3:-3507270 Msa0272010:CDS
AGCAGCAACCCTATATGTCC+TGG 0.521464 2_3:+3502591 None:intergenic
TTTCCAGTTTCTTCAAACAA+AGG 0.525530 2_3:+3502620 None:intergenic
TCTACCAATATAGCCGAATC+CGG 0.527525 2_3:+3509291 None:intergenic
GACTTATTTATGCCTTCGGA+AGG 0.527759 2_3:-3502469 Msa0272010:three_prime_UTR
GTGAAACAGGTGAGAGCGAT+GGG 0.528108 2_3:-3503897 Msa0272010:CDS
TCACTAACTTCAGCAGTGTG+TGG 0.529673 2_3:+3503387 None:intergenic
GCTGCTTTGGAAACACAACT+TGG 0.530870 2_3:-3502652 Msa0272010:CDS
TGAATTGATGGATGTTCTTG+TGG 0.533307 2_3:-3505010 Msa0272010:CDS
ATGGAGATTGATGGTGATGG+TGG 0.533466 2_3:-3509105 Msa0272010:CDS
CAAAGTTGTTCAGTGCCTGA+TGG 0.535223 2_3:-3506663 Msa0272010:CDS
GAAATTGATCAAGCTGAGAC+TGG 0.535955 2_3:-3503919 Msa0272010:CDS
TGGTTGATAGTATATCCATC+AGG 0.537431 2_3:+3506648 None:intergenic
GAAGTGCCAAATCAGACTTT+CGG 0.537715 2_3:-3502936 Msa0272010:CDS
TTCTGAAATAGGCTCTATTG+AGG 0.539258 2_3:-3506342 Msa0272010:CDS
ATGTTACACAGGTAAGCCTC+AGG 0.539889 2_3:-3503451 Msa0272010:intron
TTTAAGAATTTCAAAATACC+AGG 0.540401 2_3:+3506254 None:intergenic
AGGTGTTTCTTCTTCAAGAG+AGG 0.542309 2_3:-3509001 Msa0272010:intron
ACAAATGGTGAATGAGTTGA+AGG 0.542466 2_3:-3509160 Msa0272010:CDS
AATATAGCCGAATCCGGAGC+TGG 0.542555 2_3:+3509297 None:intergenic
TTATTTCAGTTTATTCTGGG+TGG 0.544030 2_3:+3502281 None:intergenic
TTGAGGATAAAGAATCTCCT+AGG 0.544287 2_3:-3506325 Msa0272010:CDS
GCAGCTTCTGAGTACTCGCT+TGG 0.545003 2_3:+3505126 None:intergenic
GTTGAGCCGCCTAATGATCT+GGG 0.545720 2_3:-3505996 Msa0272010:CDS
GTAGATTCAACTAGCGGCGG+CGG 0.546291 2_3:-3509273 Msa0272010:CDS
AATCCCAAATTCAATCCCAA+TGG 0.547653 2_3:-3509505 Msa0272010:exon
TGAGTTGAAGGAAGTTCAGA+AGG 0.548314 2_3:-3509148 Msa0272010:CDS
CGAAGCACTTGAATTGGTGA+TGG 0.548587 2_3:-3502908 Msa0272010:CDS
TGGGTGGTGCAAAACAATTA+CGG 0.549707 2_3:+3502297 None:intergenic
CTAGCAACCGAGAGTGGTGA+AGG 0.552221 2_3:-3502871 Msa0272010:CDS
CATCCTCATCATCTAAAGAC+CGG 0.553770 2_3:+3505916 None:intergenic
ATCTTCAACCAAACCAACAA+TGG 0.555287 2_3:-3509391 Msa0272010:CDS
GAAGAAAATATTGAAAGCAA+AGG 0.555883 2_3:-3503331 Msa0272010:CDS
GCTGTTCGTAGATTGATTCG+AGG 0.556442 2_3:-3509021 Msa0272010:CDS
CTCCCATGCTATGAAAGAGT+TGG 0.556719 2_3:-3502803 Msa0272010:CDS
ACGACATCAGCCGAAGGACG+TGG 0.558256 2_3:+3506017 None:intergenic
AGAAGATGATGCAGAGGTTG+GGG 0.559328 2_3:-3505040 Msa0272010:CDS
AGTAAAAGATTTGCAAGCAA+TGG 0.559584 2_3:-3505886 Msa0272010:CDS
CTTCCGGTCTTTAGATGATG+AGG 0.560084 2_3:-3505919 Msa0272010:CDS
AACACACCAATATGAAACTC+CGG 0.560688 2_3:+3509231 None:intergenic
TTGTTGGCAAATGCTCATAA+GGG 0.564120 2_3:-3506047 Msa0272010:CDS
ACTAGCGGCGGCGGTAGTGG+TGG 0.564350 2_3:-3509264 Msa0272010:CDS
GGTCATGAGATGAGAAGAGA+AGG 0.567102 2_3:+3506765 None:intergenic
GGAAGCGGCGGTGAAACAAA+TGG 0.569612 2_3:-3509175 Msa0272010:CDS
CATCCGCATCAGCCCATCAT+CGG 0.572641 2_3:+3504050 None:intergenic
CCTGCAAGACATCCAGATGC+GGG 0.573562 2_3:-3504000 Msa0272010:CDS
AGTACTCGCTTGGACAAAGA+AGG 0.573716 2_3:+3505136 None:intergenic
GTGTGGGTTAACAAAGGCAC+GGG 0.575582 2_3:+3503404 None:intergenic
AAGCTCCTGGACTGGACAAG+TGG 0.579076 2_3:-3507257 Msa0272010:CDS
GCAAATGCTCATAAGGGAGA+GGG 0.579740 2_3:-3506041 Msa0272010:CDS
CACTAACTTCAGCAGTGTGT+GGG 0.580709 2_3:+3503388 None:intergenic
TACTATCAACCAACAACACA+TGG 0.581340 2_3:-3506637 Msa0272010:CDS
AACAATTACTCAGGAAGGAG+AGG 0.581483 2_3:+3507091 None:intergenic
ATACCTTCAAACAATTACTC+AGG 0.583544 2_3:+3507082 None:intergenic
CAAGTATAAAATTATTGAGA+CGG 0.585225 2_3:+3507707 None:intergenic
AGTACCGCTTCCTATTTGCA+AGG 0.586680 2_3:+3507742 None:intergenic
TTGCGGAGTCCGAACTGCAG+AGG 0.587099 2_3:-3503101 Msa0272010:CDS
GGTGAAACAGGTGAGAGCGA+TGG 0.587248 2_3:-3503898 Msa0272010:CDS
GGATGAAGATAATGCCTTGG+AGG 0.589707 2_3:-3506399 Msa0272010:CDS
TTATGAGGGTGGTCAAGGGA+TGG 0.589760 2_3:-3509124 Msa0272010:CDS
CGACTCTGAGTCTGTAGTTG+AGG 0.592639 2_3:-3503866 Msa0272010:CDS
GCTATACAGAAGCACAGCAA+TGG 0.593564 2_3:-3506530 Msa0272010:CDS
TTGCAAAGAGCATTTGATGT+GGG 0.593810 2_3:+3506095 None:intergenic
AATACAGCATGGCCAATCCA+TGG 0.594671 2_3:+3502982 None:intergenic
ACTCAGGAAGGAGAGGTGAT+CGG 0.597768 2_3:+3507098 None:intergenic
AAAGCAAAGGATCATCCAAA+GGG 0.598470 2_3:-3503318 Msa0272010:CDS
GAAAGCAAAGGATCATCCAA+AGG 0.599025 2_3:-3503319 Msa0272010:CDS
ATTCTGATGATTCAGATAGT+GGG 0.599068 2_3:-3503813 Msa0272010:CDS
GATGCCGCATCTTCCAATTG+TGG 0.601907 2_3:+3506896 None:intergenic
CTTCAAACAATTACTCAGGA+AGG 0.602501 2_3:+3507086 None:intergenic
AAACAATTGTCAGATTGGGT+GGG 0.602741 2_3:-3506587 Msa0272010:CDS
TGTGTGGGTTAACAAAGGCA+CGG 0.602980 2_3:+3503403 None:intergenic
TCTCCCTTGCAAATAGGAAG+CGG 0.604277 2_3:-3507746 Msa0272010:CDS
TGGTGCTATCGACAAAATCA+GGG 0.605594 2_3:-3508044 Msa0272010:CDS
GAAGTAACTTCATCAATGAA+GGG 0.606468 2_3:-3507986 Msa0272010:CDS
CCTCTGCATCATCTTCTCCA+GGG 0.606722 2_3:+3505046 None:intergenic
TTGAGTTACTAGTAAAAGGG+TGG 0.606996 2_3:-3502361 Msa0272010:three_prime_UTR
CGAACAGCATATCGAACAGA+AGG 0.607154 2_3:+3509036 None:intergenic
TTTCCAATAATGAAAGGATG+CGG 0.608175 2_3:+3503677 None:intergenic
AAGTCACTAGCAACCGAGAG+TGG 0.609058 2_3:-3502877 Msa0272010:CDS
TGTGGATGAAGATAATGCCT+TGG 0.609887 2_3:-3506402 Msa0272010:CDS
CTCTGCATCATCTTCTCCAG+GGG 0.613059 2_3:+3505047 None:intergenic
GGGATGGAGATTGATGGTGA+TGG 0.613191 2_3:-3509108 Msa0272010:CDS
GCAATGATATCACCGATGAT+GGG 0.613735 2_3:-3504062 Msa0272010:CDS
GTACCGCTTCCTATTTGCAA+GGG 0.614801 2_3:+3507743 None:intergenic
CTGATCTGAAGGTTCCTCCA+AGG 0.616326 2_3:+3506385 None:intergenic
TCTTAAAACATTGACTCCTG+AGG 0.616364 2_3:-3502680 Msa0272010:CDS
ACCTGCAAGACATCCAGATG+CGG 0.618983 2_3:-3504001 Msa0272010:CDS
AGTACGTAAGTTCTGTGTCA+AGG 0.622191 2_3:-3502743 Msa0272010:CDS
TGTTCCACAATTGGAAGATG+CGG 0.622868 2_3:-3506900 Msa0272010:CDS
CCCTGGAGAAGATGATGCAG+AGG 0.623336 2_3:-3505046 Msa0272010:CDS
AGGCTTATGAGGGTGGTCAA+GGG 0.628293 2_3:-3509128 Msa0272010:CDS
AAATATTTAAAAGAAGACCA+TGG 0.628974 2_3:-3502999 Msa0272010:CDS
GTACATCATCACTGCAGTCG+TGG 0.629610 2_3:+3505208 None:intergenic
GTTCAGAAGGCTTATGAGGG+TGG 0.630689 2_3:-3509135 Msa0272010:CDS
GAAGTTCAGAAGGCTTATGA+GGG 0.633937 2_3:-3509138 Msa0272010:CDS
TGATGATGCAATGTTCAGGA+TGG 0.635467 2_3:-3503785 Msa0272010:CDS
AAGCACCATATGCGAATAGG+CGG 0.636479 2_3:+3507850 None:intergenic
GAACTCGTAACTTCTCGTCG+TGG 0.643517 2_3:+3506225 None:intergenic
CTTGCAAAGAGCATTTGATG+TGG 0.647224 2_3:+3506094 None:intergenic
GTGAACACGAGGCTGACAGA+AGG 0.648318 2_3:+3506964 None:intergenic
GGCTCAACGACATCAGCCGA+AGG 0.649021 2_3:+3506011 None:intergenic
TGATCAATAGCAGACCGCAT+AGG 0.649279 2_3:+3504952 None:intergenic
CGCATAGGAGCTGATGACTG+TGG 0.649317 2_3:+3504967 None:intergenic
CAAATGCTCATAAGGGAGAG+GGG 0.651139 2_3:-3506040 Msa0272010:CDS
AGCAGTGTGTGGGTTAACAA+AGG 0.656507 2_3:+3503398 None:intergenic
GACCGGAAGAGAGAAACTGA+AGG 0.657617 2_3:+3505933 None:intergenic
TCACAATTCAAAACAGAACC+CGG 0.659461 2_3:-3506461 Msa0272010:CDS
TAGCAACCGAGAGTGGTGAA+GGG 0.660003 2_3:-3502870 Msa0272010:CDS
CACAGTCATCAGCTCCTATG+CGG 0.663288 2_3:-3504966 Msa0272010:CDS
AAATAAAGCCAAATACAGCA+TGG 0.665895 2_3:+3502971 None:intergenic
GTCATGAGATGAGAAGAGAA+GGG 0.666467 2_3:+3506766 None:intergenic
TCACCGATGATGGGCTGATG+CGG 0.668428 2_3:-3504053 Msa0272010:CDS
TGATGATTCAGATAGTGGGA+TGG 0.668681 2_3:-3503809 Msa0272010:CDS
GGCCAAACACTGTGAACACG+AGG 0.670920 2_3:+3506953 None:intergenic
TGAATCGATTAGGGAAGCGG+CGG 0.676427 2_3:-3509187 Msa0272010:CDS
TGTGTTTAAGGATTTAGCGG+CGG 0.680588 2_3:-3509214 Msa0272010:CDS
AGTTGGACGAGAAATTTAGG+TGG 0.682366 2_3:-3506127 Msa0272010:CDS
GAAAATTTGACTGTATCACA+AGG 0.688705 2_3:-3506508 Msa0272010:CDS
CAGGAAGGAGAGGTGATCGG+CGG 0.689005 2_3:+3507101 None:intergenic
ATATTGGTAGATTCAACTAG+CGG 0.689407 2_3:-3509279 Msa0272010:CDS
GGAAGCTACATTATCCAGAG+AGG 0.695301 2_3:-3505865 Msa0272010:intron
GAGTACACAGTAAGAACCTG+AGG 0.695385 2_3:+3503435 None:intergenic
TACGAACCCAGATCATTAGG+CGG 0.700755 2_3:+3505990 None:intergenic
TTGGTAGATTCAACTAGCGG+CGG 0.715094 2_3:-3509276 Msa0272010:CDS
AATCATCAGAATCTTCAGGG+TGG 0.753774 2_3:+3503824 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTAGCTTTTATTAT+TGG - chr2_3:3503473-3503492 Msa0272010:intron 10.0%
!! TACAAATAATAATAAACAAT+AGG + chr2_3:3504526-3504545 None:intergenic 10.0%
!!! TTTTTTATATACCATTTTAA+GGG + chr2_3:3507113-3507132 None:intergenic 10.0%
!!! AAAAAAAAAAAAAAGTATGA+AGG + chr2_3:3509595-3509614 None:intergenic 10.0%
!!! TTCTTAAATTTTTTATTGAG+AGG + chr2_3:3502403-3502422 None:intergenic 15.0%
!! TGCTTATAATATAAATGTTT+AGG + chr2_3:3503510-3503529 None:intergenic 15.0%
!!! TTGCAACATTTTTTTTTATT+TGG - chr2_3:3503596-3503615 Msa0272010:CDS 15.0%
!!! AAAAACATTTTTAAGAATGT+AGG + chr2_3:3504295-3504314 None:intergenic 15.0%
!!! TATTTTTGGTGATAAAAATA+GGG + chr2_3:3504492-3504511 None:intergenic 15.0%
!! ATAAGAATATTTATCAAAAC+AGG + chr2_3:3504909-3504928 None:intergenic 15.0%
!!! TTTTGTGAAATTATTATTGA+AGG - chr2_3:3505047-3505066 Msa0272010:CDS 15.0%
!!! TTCAACATTTTAAATAATAG+AGG - chr2_3:3506090-3506109 Msa0272010:CDS 15.0%
!!! GTTTTTTATATACCATTTTA+AGG + chr2_3:3507114-3507133 None:intergenic 15.0%
!!! TTTTTTTTTTGTAATTTACC+TGG - chr2_3:3507569-3507588 Msa0272010:intron 15.0%
!! TTAAAAAGATTTAGATATGA+AGG + chr2_3:3508347-3508366 None:intergenic 15.0%
!!! TATCTAAATCTTTTTAACAT+TGG - chr2_3:3508350-3508369 Msa0272010:intron 15.0%
!!! ATTTGGGATTTTGAAATTTT+GGG + chr2_3:3502323-3502342 None:intergenic 20.0%
!!! AATTTGGGATTTTGAAATTT+TGG + chr2_3:3502324-3502343 None:intergenic 20.0%
!! ACAATAACAATACAAAACAA+AGG + chr2_3:3502927-3502946 None:intergenic 20.0%
!!! TGTATTGTTATTGTAGTTTT+AGG - chr2_3:3502933-3502952 Msa0272010:CDS 20.0%
!!! GTATTGTTATTGTAGTTTTA+GGG - chr2_3:3502934-3502953 Msa0272010:CDS 20.0%
!!! TTTTATAATTAGGGTATGTT+TGG - chr2_3:3503047-3503066 Msa0272010:CDS 20.0%
!!! GTTGTTTCCATAAAATATTT+TGG - chr2_3:3503286-3503305 Msa0272010:CDS 20.0%
!!! AAGTTCTCCAAAATATTTTA+TGG + chr2_3:3503296-3503315 None:intergenic 20.0%
!! AGAGTTTATGTGAAAATAAT+TGG - chr2_3:3503448-3503467 Msa0272010:intron 20.0%
!! TAAAATAAGTTAACAACACA+CGG + chr2_3:3503692-3503711 None:intergenic 20.0%
!! CAAGTATAAAATTATTGAGA+CGG + chr2_3:3504134-3504153 None:intergenic 20.0%
!!! AATTTTATACTTGGTTGAAA+AGG - chr2_3:3504141-3504160 Msa0272010:intron 20.0%
!!! CTATTTTTGGTGATAAAAAT+AGG + chr2_3:3504493-3504512 None:intergenic 20.0%
!! TTTAAGAATTTCAAAATACC+AGG + chr2_3:3505587-3505606 None:intergenic 20.0%
!!! TATTTTGAAATTCTTAAAGC+TGG - chr2_3:3505589-3505608 Msa0272010:intron 20.0%
!! AAAGGAAATAATGAAGTTTA+TGG - chr2_3:3505637-3505656 Msa0272010:intron 20.0%
!! AAGTATCAAATATTAGAAGA+TGG + chr2_3:3506137-3506156 None:intergenic 20.0%
!! ATTTGATACTTTCAAAATGT+TGG - chr2_3:3506146-3506165 Msa0272010:CDS 20.0%
!! AATTTACACTACTTTCAATT+GGG + chr2_3:3507247-3507266 None:intergenic 20.0%
!! AAAAACACAATTATTCGTTA+GGG + chr2_3:3507274-3507293 None:intergenic 20.0%
!! CAAAAATTTCCAATAATGAA+AGG + chr2_3:3508170-3508189 None:intergenic 20.0%
!!! TCAAATTTTCCAGAAAATAT+TGG - chr2_3:3508765-3508784 Msa0272010:intron 20.0%
!! AAATATTTAAAAGAAGACCA+TGG - chr2_3:3508839-3508858 Msa0272010:intron 20.0%
!!! ATTTTGAGTTACTAGTAAAA+GGG - chr2_3:3509474-3509493 Msa0272010:CDS 20.0%
!! ACATTATTTCAGTTTATTCT+GGG + chr2_3:3509563-3509582 None:intergenic 20.0%
!! TACATTATTTCAGTTTATTC+TGG + chr2_3:3509564-3509583 None:intergenic 20.0%
!!! TTTGAAATTTTGGGGTTTTA+GGG + chr2_3:3502314-3502333 None:intergenic 25.0%
!!! TTTTGAAATTTTGGGGTTTT+AGG + chr2_3:3502315-3502334 None:intergenic 25.0%
!!! TTTGGGATTTTGAAATTTTG+GGG + chr2_3:3502322-3502341 None:intergenic 25.0%
! TTCTTTATCTTGAGATTCTA+TGG + chr2_3:3502380-3502399 None:intergenic 25.0%
!! TTCTTATGATTTTCCATTGT+TGG + chr2_3:3502463-3502482 None:intergenic 25.0%
!! GGAAATTAACTAATTTTCAC+TGG - chr2_3:3502955-3502974 Msa0272010:CDS 25.0%
!!! TGGTGCTTGTTTTATAATTA+GGG - chr2_3:3503038-3503057 Msa0272010:CDS 25.0%
! TTATACAAATAAGCTCTCTA+GGG - chr2_3:3503142-3503161 Msa0272010:CDS 25.0%
! ATAAATCTACTACGAGTTTA+AGG + chr2_3:3503830-3503849 None:intergenic 25.0%
! TAAACTCGTAGTAGATTTAT+TGG - chr2_3:3503830-3503849 Msa0272010:CDS 25.0%
!! AATGCTGGATTATTATGTTT+TGG - chr2_3:3503892-3503911 Msa0272010:CDS 25.0%
!! ATGCTGGATTATTATGTTTT+GGG - chr2_3:3503893-3503912 Msa0272010:CDS 25.0%
!! CGTCTCAATAATTTTATACT+TGG - chr2_3:3504132-3504151 Msa0272010:intron 25.0%
!! AGGCTTGAAATAACTATTTT+TGG + chr2_3:3504506-3504525 None:intergenic 25.0%
!!! GTATTGGTTATAGAAAGAAA+TGG - chr2_3:3504817-3504836 Msa0272010:intron 25.0%
! TTCTTAAACAATTGTCAGAT+TGG - chr2_3:3505246-3505265 Msa0272010:intron 25.0%
! TCTTAAACAATTGTCAGATT+GGG - chr2_3:3505247-3505266 Msa0272010:intron 25.0%
!!! TTTCTTTGTTTTTGTTGATC+AGG + chr2_3:3506300-3506319 None:intergenic 25.0%
! AATAAACAGAACCCTTAAAA+TGG - chr2_3:3507099-3507118 Msa0272010:CDS 25.0%
! GAATTTACACTACTTTCAAT+TGG + chr2_3:3507248-3507267 None:intergenic 25.0%
! CAAAAACACAATTATTCGTT+AGG + chr2_3:3507275-3507294 None:intergenic 25.0%
! TAAACTAAAGAGCTTCAATT+AGG + chr2_3:3507314-3507333 None:intergenic 25.0%
!! AATTGAAGCTCTTTAGTTTA+TGG - chr2_3:3507314-3507333 Msa0272010:intron 25.0%
!!! ACTTTAAAATGTTCATGAAG+CGG + chr2_3:3507365-3507384 None:intergenic 25.0%
!! TTTTCTTGTCATCTAGAAAA+AGG - chr2_3:3507470-3507489 Msa0272010:intron 25.0%
! AGGAACTTTAATTGAATGAA+AGG - chr2_3:3507490-3507509 Msa0272010:intron 25.0%
! AGATGATTAAGTCTTCTAAA+TGG + chr2_3:3507668-3507687 None:intergenic 25.0%
!! ATTTTTGTTCATGAAAATCC+AGG - chr2_3:3508183-3508202 Msa0272010:intron 25.0%
! AAATCTATTTATCCACTTTG+TGG + chr2_3:3508296-3508315 None:intergenic 25.0%
! GAAGAAAATATTGAAAGCAA+AGG - chr2_3:3508507-3508526 Msa0272010:intron 25.0%
!! AGGAAGAAACCATTTTATAT+CGG + chr2_3:3508666-3508685 None:intergenic 25.0%
!! AATCCAAAAGGAAGAATTTT+GGG + chr2_3:3508692-3508711 None:intergenic 25.0%
!! AAATCCAAAAGGAAGAATTT+TGG + chr2_3:3508693-3508712 None:intergenic 25.0%
!! GACAATTTTCAAAATCCAAA+AGG + chr2_3:3508704-3508723 None:intergenic 25.0%
!! AATTTTCCAGAAAATATTGG+TGG - chr2_3:3508768-3508787 Msa0272010:intron 25.0%
!! AATAATCCACCAATATTTTC+TGG + chr2_3:3508777-3508796 None:intergenic 25.0%
!!! CAATGTTTTAAGAAGATACT+TGG + chr2_3:3509151-3509170 None:intergenic 25.0%
! GAAGCTTCAAAATTCATTTA+AGG - chr2_3:3509342-3509361 Msa0272010:CDS 25.0%
!! CTTCAAAATTCATTTAAGGT+GGG - chr2_3:3509346-3509365 Msa0272010:CDS 25.0%
!! TTCAAAATTCATTTAAGGTG+GGG - chr2_3:3509347-3509366 Msa0272010:CDS 25.0%
!!! CATTTTGAGTTACTAGTAAA+AGG - chr2_3:3509473-3509492 Msa0272010:CDS 25.0%
! AAAGAGGAAGAAGAGTTTTA+GGG + chr2_3:3502287-3502306 None:intergenic 30.0%
! AAAAGAGGAAGAAGAGTTTT+AGG + chr2_3:3502288-3502307 None:intergenic 30.0%
!! ATGATTTTCCATTGTTGGTT+TGG + chr2_3:3502458-3502477 None:intergenic 30.0%
ATATTGGTAGATTCAACTAG+CGG - chr2_3:3502559-3502578 Msa0272010:three_prime_UTR 30.0%
GTTTCATATTGGTGTGTTTA+AGG - chr2_3:3502612-3502631 Msa0272010:exon 30.0%
TTGAAGCTGAGAAAAATGAT+GGG - chr2_3:3502764-3502783 Msa0272010:CDS 30.0%
TACCACCTAAGTATAGAAAT+TGG + chr2_3:3502982-3503001 None:intergenic 30.0%
!!! GTGGTGCTTGTTTTATAATT+AGG - chr2_3:3503037-3503056 Msa0272010:CDS 30.0%
AATTAGGGTATGTTTGGATT+TGG - chr2_3:3503053-3503072 Msa0272010:CDS 30.0%
!! GAGTGTTCATAAGCTATTTT+CGG - chr2_3:3503118-3503137 Msa0272010:CDS 30.0%
CTTATACAAATAAGCTCTCT+AGG - chr2_3:3503141-3503160 Msa0272010:CDS 30.0%
TAAGCTGTTTATCCAAACAA+GGG + chr2_3:3503168-3503187 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+AGG + chr2_3:3503169-3503188 None:intergenic 30.0%
!! GCTTACATAAGCTATTTCTA+TGG - chr2_3:3503220-3503239 Msa0272010:CDS 30.0%
TCAAATAAGCCAATCTAAAC+AGG - chr2_3:3503399-3503418 Msa0272010:CDS 30.0%
ATTTAGCTGTTTATCCAAAC+AGG - chr2_3:3503549-3503568 Msa0272010:intron 30.0%
TTTAGCTGTTTATCCAAACA+GGG - chr2_3:3503550-3503569 Msa0272010:intron 30.0%
ATGAAACATGATCATGATTC+AGG + chr2_3:3503660-3503679 None:intergenic 30.0%
GAAGTAACTTCATCAATGAA+GGG - chr2_3:3503852-3503871 Msa0272010:CDS 30.0%
!!! TTATGTTTTGGGAAAATCGT+CGG - chr2_3:3503904-3503923 Msa0272010:CDS 30.0%
TGTATTCATTGTGAAATTGC+AGG - chr2_3:3503943-3503962 Msa0272010:CDS 30.0%
! TTTTATCATTGCTCCATTCA+TGG + chr2_3:3504036-3504055 None:intergenic 30.0%
CCATACATCAAAGAATTTGT+CGG - chr2_3:3504061-3504080 Msa0272010:CDS 30.0%
TATAAAATTATTGAGACGGC+AGG + chr2_3:3504130-3504149 None:intergenic 30.0%
GTTTGTATATCTTATGCAGA+AGG - chr2_3:3504163-3504182 Msa0272010:intron 30.0%
!!! GATTGGCTTTGGATTTTAAT+AGG - chr2_3:3504243-3504262 Msa0272010:intron 30.0%
! CATTTGATAATTGCTGAACT+TGG - chr2_3:3504421-3504440 Msa0272010:intron 30.0%
AAAAAATTGGTAGAGCTGAA+CGG + chr2_3:3504715-3504734 None:intergenic 30.0%
ATACCTTCAAACAATTACTC+AGG + chr2_3:3504759-3504778 None:intergenic 30.0%
TGACAGATACTACTTTGTAT+TGG - chr2_3:3504801-3504820 Msa0272010:intron 30.0%
TTTATATAGCCATGTGTTGT+TGG + chr2_3:3505213-3505232 None:intergenic 30.0%
AACACATGGCTATATAAAGT+TGG - chr2_3:3505215-3505234 Msa0272010:CDS 30.0%
GAAAATTTGACTGTATCACA+AGG - chr2_3:3505330-3505349 Msa0272010:intron 30.0%
! TTGAATAAAAAGCATGCAAC+CGG + chr2_3:3505399-3505418 None:intergenic 30.0%
AAATTTGATGAACCTGTTTG+TGG - chr2_3:3505418-3505437 Msa0272010:intron 30.0%
!! ACAGACGAAAATTCTGAAAT+AGG - chr2_3:3505485-3505504 Msa0272010:intron 30.0%
!! ATTCTGACTTTTTGAAGAGT+TGG - chr2_3:3505546-3505565 Msa0272010:intron 30.0%
!! TTCTGACTTTTTGAAGAGTT+GGG - chr2_3:3505547-3505566 Msa0272010:intron 30.0%
AACTGAAGGAATATTGCATA+AGG + chr2_3:3505894-3505913 None:intergenic 30.0%
AGTAAAAGATTTGCAAGCAA+TGG - chr2_3:3505952-3505971 Msa0272010:CDS 30.0%
TTGGAACTTAAAACTGGAAA+AGG + chr2_3:3506050-3506069 None:intergenic 30.0%
! GACATTATTATGCCTTTTCT+AGG - chr2_3:3506218-3506237 Msa0272010:CDS 30.0%
ATCCAATTTCTTGTCTGAAA+TGG - chr2_3:3506258-3506277 Msa0272010:CDS 30.0%
ATCCATTTCAGACAAGAAAT+TGG + chr2_3:3506263-3506282 None:intergenic 30.0%
! AATTTCTTGTCTGAAATGGA+TGG - chr2_3:3506262-3506281 Msa0272010:CDS 30.0%
AAAGAAACAGAGTAAATCAG+TGG - chr2_3:3506313-3506332 Msa0272010:CDS 30.0%
TTAAAGGAGTTAAAGGTCTA+GGG + chr2_3:3506439-3506458 None:intergenic 30.0%
ATTAAAGGAGTTAAAGGTCT+AGG + chr2_3:3506440-3506459 None:intergenic 30.0%
TAAGGGATTAAAGGAGTTAA+AGG + chr2_3:3506446-3506465 None:intergenic 30.0%
ATACAGAAATACACACATCA+GGG + chr2_3:3506498-3506517 None:intergenic 30.0%
AATACAGAAATACACACATC+AGG + chr2_3:3506499-3506518 None:intergenic 30.0%
TATGATAGTTGTGAAACAGA+AGG + chr2_3:3507174-3507193 None:intergenic 30.0%
! CTTTAGTTTATGGAGGTAAT+TGG - chr2_3:3507324-3507343 Msa0272010:intron 30.0%
!! CTTTAAAATGTTCATGAAGC+GGG + chr2_3:3507364-3507383 None:intergenic 30.0%
ATCTATCTCATATAACAACC+AGG + chr2_3:3507590-3507609 None:intergenic 30.0%
TAAACTCAATCCTTCTTTGT+TGG - chr2_3:3507632-3507651 Msa0272010:intron 30.0%
ATTCTGATGATTCAGATAGT+GGG - chr2_3:3508025-3508044 Msa0272010:CDS 30.0%
TTTCCAATAATGAAAGGATG+CGG + chr2_3:3508164-3508183 None:intergenic 30.0%
AACTAGCATCAAAACCATTT+AGG - chr2_3:3508593-3508612 Msa0272010:intron 30.0%
!!! AACCATTTTATATCGGTTCA+AGG + chr2_3:3508659-3508678 None:intergenic 30.0%
!!! TGTCGATTCAAGAAATTTTG+CGG - chr2_3:3508720-3508739 Msa0272010:intron 30.0%
TTTAAAAGAAGACCATGGAT+TGG - chr2_3:3508844-3508863 Msa0272010:intron 30.0%
AAATAAAGCCAAATACAGCA+TGG + chr2_3:3508870-3508889 None:intergenic 30.0%
!!! TGCTGTATTTGGCTTTATTT+TGG - chr2_3:3508870-3508889 Msa0272010:intron 30.0%
!! TTTTAAGAAGATACTTGGTG+AGG + chr2_3:3509146-3509165 None:intergenic 30.0%
! ATTCCTTTGTTTGAAGAAAC+TGG - chr2_3:3509215-3509234 Msa0272010:CDS 30.0%
TTTCCAGTTTCTTCAAACAA+AGG + chr2_3:3509221-3509240 None:intergenic 30.0%
AAAAATGAACCAGGACATAT+AGG - chr2_3:3509238-3509257 Msa0272010:CDS 30.0%
AAAATGAACCAGGACATATA+GGG - chr2_3:3509239-3509258 Msa0272010:CDS 30.0%
! ATCTCTTTACCTCTTTTACT+CGG + chr2_3:3509278-3509297 None:intergenic 30.0%
GCTTCAAAATTCATTTAAGG+TGG - chr2_3:3509345-3509364 Msa0272010:CDS 30.0%
TACGGTAGAAAATGTGATTT+CGG + chr2_3:3509526-3509545 None:intergenic 30.0%
TTATTTCAGTTTATTCTGGG+TGG + chr2_3:3509560-3509579 None:intergenic 30.0%
AATCCCAAATTCAATCCCAA+TGG - chr2_3:3502333-3502352 Msa0272010:three_prime_UTR 35.0%
ATCCCAAATTCAATCCCAAT+GGG - chr2_3:3502334-3502353 Msa0272010:three_prime_UTR 35.0%
TACCCATTGGGATTGAATTT+GGG + chr2_3:3502339-3502358 None:intergenic 35.0%
!! ATTGTTGGTTTGGTTGAAGA+TGG + chr2_3:3502448-3502467 None:intergenic 35.0%
ATCTTCAACCAAACCAACAA+TGG - chr2_3:3502447-3502466 Msa0272010:three_prime_UTR 35.0%
TTCGGATTTGGATTTGGATT+TGG + chr2_3:3502518-3502537 None:intergenic 35.0%
AACACACCAATATGAAACTC+CGG + chr2_3:3502610-3502629 None:intergenic 35.0%
TGGTGTGTTTAAGGATTTAG+CGG - chr2_3:3502621-3502640 Msa0272010:CDS 35.0%
! ACAAATGGTGAATGAGTTGA+AGG - chr2_3:3502678-3502697 Msa0272010:CDS 35.0%
CTTGAAGCTGAGAAAAATGA+TGG - chr2_3:3502763-3502782 Msa0272010:CDS 35.0%
CTGGTCCAATTTCTATACTT+AGG - chr2_3:3502974-3502993 Msa0272010:CDS 35.0%
GTCCAATTTCTATACTTAGG+TGG - chr2_3:3502977-3502996 Msa0272010:CDS 35.0%
TATTCTAGGCCTGTTTAGAT+TGG + chr2_3:3503411-3503430 None:intergenic 35.0%
CTGTCTTCATAAGCTATTCT+AGG + chr2_3:3503425-3503444 None:intergenic 35.0%
AAAAATGTTGCAACAAGCCT+TGG + chr2_3:3503589-3503608 None:intergenic 35.0%
! CTAGGTTTAACACTTTTAGC+TGG - chr2_3:3503774-3503793 Msa0272010:CDS 35.0%
GGAAGTAACTTCATCAATGA+AGG - chr2_3:3503851-3503870 Msa0272010:CDS 35.0%
GAAGCAAAAGATTGTCTTCT+GGG - chr2_3:3503965-3503984 Msa0272010:CDS 35.0%
CCGACAAATTCTTTGATGTA+TGG + chr2_3:3504064-3504083 None:intergenic 35.0%
TACTTATCTCCCTTGCAAAT+AGG - chr2_3:3504086-3504105 Msa0272010:intron 35.0%
AATCATGTTATTGAAGCTCC+TGG - chr2_3:3504568-3504587 Msa0272010:intron 35.0%
!!! TCTCTCGAACTTTTAAAGCA+AGG + chr2_3:3504648-3504667 None:intergenic 35.0%
TCTACAGACAGTTCCATTTA+TGG - chr2_3:3504673-3504692 Msa0272010:intron 35.0%
! TGGTAGTAGTTTGCCATAAA+TGG + chr2_3:3504689-3504708 None:intergenic 35.0%
CTTCAAACAATTACTCAGGA+AGG + chr2_3:3504755-3504774 None:intergenic 35.0%
CTTCCTGAGTAATTGTTTGA+AGG - chr2_3:3504753-3504772 Msa0272010:intron 35.0%
GTAGTATCTGTCATGAATAG+AGG + chr2_3:3504794-3504813 None:intergenic 35.0%
TCCAATTGTGGAACAGTATT+GGG + chr2_3:3504933-3504952 None:intergenic 35.0%
TTCCAATTGTGGAACAGTAT+TGG + chr2_3:3504934-3504953 None:intergenic 35.0%
! ACTTTGTTTGACAGAACAAC+TGG + chr2_3:3505161-3505180 None:intergenic 35.0%
!! TGGTTGATAGTATATCCATC+AGG + chr2_3:3505193-3505212 None:intergenic 35.0%
TACTATCAACCAACAACACA+TGG - chr2_3:3505201-3505220 Msa0272010:CDS 35.0%
TAAACAATTGTCAGATTGGG+TGG - chr2_3:3505250-3505269 Msa0272010:intron 35.0%
AAACAATTGTCAGATTGGGT+GGG - chr2_3:3505251-3505270 Msa0272010:intron 35.0%
! CAAAAGAGTTGCTGTTATAG+TGG - chr2_3:3505286-3505305 Msa0272010:intron 35.0%
TCACAATTCAAAACAGAACC+CGG - chr2_3:3505377-3505396 Msa0272010:intron 35.0%
! TGAATAAAAAGCATGCAACC+GGG + chr2_3:3505398-3505417 None:intergenic 35.0%
CATTATCTTCATCCACAAAC+AGG + chr2_3:3505433-3505452 None:intergenic 35.0%
!! TTCTGAAATAGGCTCTATTG+AGG - chr2_3:3505496-3505515 Msa0272010:intron 35.0%
TTGAGGATAAAGAATCTCCT+AGG - chr2_3:3505513-3505532 Msa0272010:intron 35.0%
AAAGAATCTCCTAGGACTAA+TGG - chr2_3:3505521-3505540 Msa0272010:intron 35.0%
AAGAATCTCCTAGGACTAAT+GGG - chr2_3:3505522-3505541 Msa0272010:intron 35.0%
AATGAAGTTTATGGCTGTTC+AGG - chr2_3:3505646-3505665 Msa0272010:intron 35.0%
ATGAAGTTTATGGCTGTTCA+GGG - chr2_3:3505647-3505666 Msa0272010:intron 35.0%
TGAAGTGACTTCATTTGAGT+TGG - chr2_3:3505694-3505713 Msa0272010:intron 35.0%
!! TTGAGTTGGACGAGAAATTT+AGG - chr2_3:3505708-3505727 Msa0272010:intron 35.0%
!! TTGCAAAGAGCATTTGATGT+GGG + chr2_3:3505746-3505765 None:intergenic 35.0%
TTGTTGGCAAATGCTCATAA+GGG - chr2_3:3505791-3505810 Msa0272010:intron 35.0%
TTAAAACTGGAAAAGGAACG+CGG + chr2_3:3506043-3506062 None:intergenic 35.0%
!!! TCCAGTTTTAAGTTCCAATG+AGG - chr2_3:3506052-3506071 Msa0272010:CDS 35.0%
ACCTCATTGGAACTTAAAAC+TGG + chr2_3:3506056-3506075 None:intergenic 35.0%
! TAGGGTTTGAATTCTGGAAA+GGG + chr2_3:3506421-3506440 None:intergenic 35.0%
GATGCTTATGTTTATCTCTG+CGG - chr2_3:3506586-3506605 Msa0272010:CDS 35.0%
ACAAGAACATCCATCAATTC+AGG + chr2_3:3506829-3506848 None:intergenic 35.0%
! TGAATTGATGGATGTTCTTG+TGG - chr2_3:3506828-3506847 Msa0272010:CDS 35.0%
GTTATACCTGTATGCCAATA+TGG - chr2_3:3506990-3507009 Msa0272010:intron 35.0%
! CTATCATTTTCATAGTCTCG+AGG - chr2_3:3507145-3507164 Msa0272010:CDS 35.0%
! TGAAGCTCTTTAGTTTATGG+AGG - chr2_3:3507317-3507336 Msa0272010:intron 35.0%
!! TTAAAGTGCCTTTTCCCATA+AGG - chr2_3:3507378-3507397 Msa0272010:intron 35.0%
ATTCTACTGCCAAACCTTAT+GGG + chr2_3:3507395-3507414 None:intergenic 35.0%
CTGAATCATCAGAATCTTCA+GGG + chr2_3:3508020-3508039 None:intergenic 35.0%
TCTGAATCATCAGAATCTTC+AGG + chr2_3:3508021-3508040 None:intergenic 35.0%
GATTCTGATGATTCAGATAG+TGG - chr2_3:3508024-3508043 Msa0272010:CDS 35.0%
AAAGAGAAGAAAAGTCAGTC+TGG - chr2_3:3508099-3508118 Msa0272010:intron 35.0%
GAGTTTGAACAGCAAAAGTT+GGG + chr2_3:3508142-3508161 None:intergenic 35.0%
ATGTTGTCTTGATGTTACAC+AGG - chr2_3:3508376-3508395 Msa0272010:intron 35.0%
TCTTACTGTGTACTCACATT+TGG - chr2_3:3508411-3508430 Msa0272010:intron 35.0%
AAAGCAAAGGATCATCCAAA+GGG - chr2_3:3508520-3508539 Msa0272010:intron 35.0%
!! GAGATTCAAGTGTCGATAAT+TGG + chr2_3:3508555-3508574 None:intergenic 35.0%
TGCCTTGAACCGATATAAAA+TGG - chr2_3:3508654-3508673 Msa0272010:intron 35.0%
! AAAGGAAGAATTTTGGGCAA+AGG + chr2_3:3508686-3508705 None:intergenic 35.0%
! TTGCCCAAAATTCTTCCTTT+TGG - chr2_3:3508686-3508705 Msa0272010:intron 35.0%
!!! GGCTTTATTTTGGAAAGATG+TGG - chr2_3:3508880-3508899 Msa0272010:intron 35.0%
!! TCTTAAAACATTGACTCCTG+AGG - chr2_3:3509158-3509177 Msa0272010:CDS 35.0%
AGAAACTGGAAAAATGAACC+AGG - chr2_3:3509229-3509248 Msa0272010:CDS 35.0%
! TCTCTTTACCTCTTTTACTC+GGG + chr2_3:3509277-3509296 None:intergenic 35.0%
TTGAGTTACTAGTAAAAGGG+TGG - chr2_3:3509477-3509496 Msa0272010:CDS 35.0%
!!! AGAAGAGTTTTAGGGTTCAG+CGG + chr2_3:3502279-3502298 None:intergenic 40.0%
CTACCCATTGGGATTGAATT+TGG + chr2_3:3502340-3502359 None:intergenic 40.0%
! TCCTTTTCTTGCTACCCATT+GGG + chr2_3:3502351-3502370 None:intergenic 40.0%
! TTCCTTTTCTTGCTACCCAT+TGG + chr2_3:3502352-3502371 None:intergenic 40.0%
TGGAAGTTCGGATTTGGATT+TGG + chr2_3:3502524-3502543 None:intergenic 40.0%
TCTACCAATATAGCCGAATC+CGG + chr2_3:3502550-3502569 None:intergenic 40.0%
TGTGTTTAAGGATTTAGCGG+CGG - chr2_3:3502624-3502643 Msa0272010:CDS 40.0%
GAATGAATCGATTAGGGAAG+CGG - chr2_3:3502648-3502667 Msa0272010:CDS 40.0%
! TGAGTTGAAGGAAGTTCAGA+AGG - chr2_3:3502690-3502709 Msa0272010:CDS 40.0%
GAAGTTCAGAAGGCTTATGA+GGG - chr2_3:3502700-3502719 Msa0272010:CDS 40.0%
!! AGCTGAGAAAAATGATGGGT+TGG - chr2_3:3502768-3502787 Msa0272010:CDS 40.0%
AGGTGTTTCTTCTTCAAGAG+AGG - chr2_3:3502837-3502856 Msa0272010:CDS 40.0%
GATATATGTGTGTGTGTGTG+TGG - chr2_3:3503018-3503037 Msa0272010:CDS 40.0%
GGGTATGTTTGGATTTGGAT+TGG - chr2_3:3503058-3503077 Msa0272010:CDS 40.0%
TGTTTATCCAAACAGGGTCT+TGG - chr2_3:3503556-3503575 Msa0272010:intron 40.0%
TAAAACACCAAGACCCTGTT+TGG + chr2_3:3503566-3503585 None:intergenic 40.0%
!! TGGTGCTATCGACAAAATCA+GGG - chr2_3:3503794-3503813 Msa0272010:CDS 40.0%
AACTTCATCAATGAAGGGTC+AGG - chr2_3:3503857-3503876 Msa0272010:CDS 40.0%
ATGAAGGGTCAGGTATAAGA+TGG - chr2_3:3503867-3503886 Msa0272010:CDS 40.0%
AGGTATAAGATGGTCAATGC+TGG - chr2_3:3503877-3503896 Msa0272010:CDS 40.0%
GGAAGCAAAAGATTGTCTTC+TGG - chr2_3:3503964-3503983 Msa0272010:CDS 40.0%
CAGGAAGACTTATCCATGAA+TGG - chr2_3:3504020-3504039 Msa0272010:CDS 40.0%
AAAGCCAATCACACCATAGT+GGG + chr2_3:3504233-3504252 None:intergenic 40.0%
ACGTGTTTGCATGAGTTTGT+GGG + chr2_3:3504380-3504399 None:intergenic 40.0%
TGATTCGCTAATGCTTCAAC+AGG + chr2_3:3504553-3504572 None:intergenic 40.0%
TTTGAATCTGCTGCAGAAGT+TGG - chr2_3:3504604-3504623 Msa0272010:intron 40.0%
! AAAGCAAGGAATAGAGCATC+AGG + chr2_3:3504634-3504653 None:intergenic 40.0%
AACAATTACTCAGGAAGGAG+AGG + chr2_3:3504750-3504769 None:intergenic 40.0%
ATGCGTTTCCTGAATATTGC+AGG - chr2_3:3504845-3504864 Msa0272010:intron 40.0%
! GGTTGATTCCTGCAATATTC+AGG + chr2_3:3504856-3504875 None:intergenic 40.0%
ACCCAATACTGTTCCACAAT+TGG - chr2_3:3504929-3504948 Msa0272010:intron 40.0%
TGTTCCACAATTGGAAGATG+CGG - chr2_3:3504938-3504957 Msa0272010:intron 40.0%
GTCATGAGATGAGAAGAGAA+GGG + chr2_3:3505075-3505094 None:intergenic 40.0%
CATCGAAAGCTAAGTGCTTA+CGG + chr2_3:3505097-3505116 None:intergenic 40.0%
TGTGGATGAAGATAATGCCT+TGG - chr2_3:3505436-3505455 Msa0272010:intron 40.0%
GTTGTTTGACTCTGATCTGA+AGG + chr2_3:3505467-3505486 None:intergenic 40.0%
TCAGAATTCCCATTAGTCCT+AGG + chr2_3:3505533-3505552 None:intergenic 40.0%
TGGGTTATAGAATCTCTTCC+TGG - chr2_3:3505566-3505585 Msa0272010:intron 40.0%
CGAGAAGTTACGAGTTCAAA+AGG - chr2_3:3505619-3505638 Msa0272010:intron 40.0%
AGTTGGACGAGAAATTTAGG+TGG - chr2_3:3505711-3505730 Msa0272010:intron 40.0%
! GCATTTGATGTGGGAGATTT+TGG + chr2_3:3505737-3505756 None:intergenic 40.0%
!! CTTGCAAAGAGCATTTGATG+TGG + chr2_3:3505747-3505766 None:intergenic 40.0%
GTTGTTGGCAAATGCTCATA+AGG - chr2_3:3505790-3505809 Msa0272010:intron 40.0%
AAGTACGAACCCAGATCATT+AGG + chr2_3:3505854-3505873 None:intergenic 40.0%
TTCCTTCAGTTTCTCTCTTC+CGG - chr2_3:3505903-3505922 Msa0272010:CDS 40.0%
CATCCTCATCATCTAAAGAC+CGG + chr2_3:3505925-3505944 None:intergenic 40.0%
CCAAAGCATAAATACCTCTC+TGG + chr2_3:3505990-3506009 None:intergenic 40.0%
!! CCAGAGAGGTATTTATGCTT+TGG - chr2_3:3505987-3506006 Msa0272010:CDS 40.0%
TTGTCAAGTGAGCAGTGAAA+CGG + chr2_3:3506176-3506195 None:intergenic 40.0%
ACCATGTGAGTTCCTAGAAA+AGG + chr2_3:3506233-3506252 None:intergenic 40.0%
! TTTGAATTCTGGAAAGGGAC+AGG + chr2_3:3506416-3506435 None:intergenic 40.0%
! CTAGGGTTTGAATTCTGGAA+AGG + chr2_3:3506422-3506441 None:intergenic 40.0%
! AAGGTCTAGGGTTTGAATTC+TGG + chr2_3:3506427-3506446 None:intergenic 40.0%
! TGGTTTGGCTAAGGGATTAA+AGG + chr2_3:3506455-3506474 None:intergenic 40.0%
! AATACACACATCAGGGTGTT+GGG + chr2_3:3506491-3506510 None:intergenic 40.0%
AAATACACACATCAGGGTGT+TGG + chr2_3:3506492-3506511 None:intergenic 40.0%
! TTACGAAGCAAAGAGCATAC+AGG + chr2_3:3506939-3506958 None:intergenic 40.0%
CTCATAGCAGTCTCAATTTC+AGG + chr2_3:3507055-3507074 None:intergenic 40.0%
GATTCTACTGCCAAACCTTA+TGG + chr2_3:3507396-3507415 None:intergenic 40.0%
! GAATGAAAGGTATGACTGCA+TGG - chr2_3:3507503-3507522 Msa0272010:intron 40.0%
CTCAATCCTTCTTTGTTGGA+AGG - chr2_3:3507636-3507655 Msa0272010:intron 40.0%
TCATTGCCTTCCAACAAAGA+AGG + chr2_3:3507645-3507664 None:intergenic 40.0%
ATCATCTCTCGCACATATCA+TGG - chr2_3:3507681-3507700 Msa0272010:intron 40.0%
AAGTTCGCATCTCTGTATGT+AGG - chr2_3:3507738-3507757 Msa0272010:CDS 40.0%
TGCAATGATATCACCGATGA+TGG - chr2_3:3507775-3507794 Msa0272010:CDS 40.0%
GCAATGATATCACCGATGAT+GGG - chr2_3:3507776-3507795 Msa0272010:CDS 40.0%
GAAATTGATCAAGCTGAGAC+TGG - chr2_3:3507919-3507938 Msa0272010:intron 40.0%
AATCATCAGAATCTTCAGGG+TGG + chr2_3:3508017-3508036 None:intergenic 40.0%
!! TGATGATTCAGATAGTGGGA+TGG - chr2_3:3508029-3508048 Msa0272010:CDS 40.0%
! TGGATGATGATGCAATGTTC+AGG - chr2_3:3508049-3508068 Msa0272010:CDS 40.0%
! TGATGATGCAATGTTCAGGA+TGG - chr2_3:3508053-3508072 Msa0272010:CDS 40.0%
GGAGTTTGAACAGCAAAAGT+TGG + chr2_3:3508143-3508162 None:intergenic 40.0%
ACTCCGCATCCTTTCATTAT+TGG - chr2_3:3508158-3508177 Msa0272010:intron 40.0%
GGAAGTAATGTATACTTGCC+TGG + chr2_3:3508204-3508223 None:intergenic 40.0%
GCACAAAAACTGGTAAACGA+CGG + chr2_3:3508225-3508244 None:intergenic 40.0%
CACAAAGCTAGCACAAAAAC+TGG + chr2_3:3508235-3508254 None:intergenic 40.0%
GTGGTTCACACACATACAAT+TGG + chr2_3:3508277-3508296 None:intergenic 40.0%
TATGTGTGTGAACCACAAAG+TGG - chr2_3:3508281-3508300 Msa0272010:intron 40.0%
GAAAGCAAAGGATCATCCAA+AGG - chr2_3:3508519-3508538 Msa0272010:intron 40.0%
AATTGGACTTCATCACCCTT+TGG + chr2_3:3508538-3508557 None:intergenic 40.0%
ATCGACACTTGAATCTCTCT+TGG - chr2_3:3508558-3508577 Msa0272010:intron 40.0%
! GCAGACTTTTGCTTCCTAAA+TGG + chr2_3:3508610-3508629 None:intergenic 40.0%
! AGCTGATTTCTTTGAGGGAT+TGG + chr2_3:3508635-3508654 None:intergenic 40.0%
! AAGGCAGCTGATTTCTTTGA+GGG + chr2_3:3508640-3508659 None:intergenic 40.0%
TTGAACAATCCTCTGCAGTT+CGG + chr2_3:3508749-3508768 None:intergenic 40.0%
! GAAGTGCCAAATCAGACTTT+CGG - chr2_3:3508902-3508921 Msa0272010:intron 40.0%
CACCAACTCTTTCATAGCAT+GGG + chr2_3:3509040-3509059 None:intergenic 40.0%
TCACCAACTCTTTCATAGCA+TGG + chr2_3:3509041-3509060 None:intergenic 40.0%
GACAAATATGCCAAGCAAAC+AGG - chr2_3:3509059-3509078 Msa0272010:CDS 40.0%
AGTACGTAAGTTCTGTGTCA+AGG - chr2_3:3509095-3509114 Msa0272010:CDS 40.0%
TGCTATTACCCGAGTAAAAG+AGG - chr2_3:3509266-3509285 Msa0272010:CDS 40.0%
TGGGGACTTATTTATGCCTT+CGG - chr2_3:3509365-3509384 Msa0272010:CDS 40.0%
GACTTATTTATGCCTTCGGA+AGG - chr2_3:3509369-3509388 Msa0272010:CDS 40.0%
ACCAAAAATTCACCTTCCGA+AGG + chr2_3:3509384-3509403 None:intergenic 40.0%
TGGGTGGTGCAAAACAATTA+CGG + chr2_3:3509544-3509563 None:intergenic 40.0%
!!! GGGGTTTTAGGGTTCAAAAG+AGG + chr2_3:3502303-3502322 None:intergenic 45.0%
TCCCAATGGGTAGCAAGAAA+AGG - chr2_3:3502347-3502366 Msa0272010:three_prime_UTR 45.0%
TTGGTAGATTCAACTAGCGG+CGG - chr2_3:3502562-3502581 Msa0272010:three_prime_UTR 45.0%
TCGTTGCCGGAGTTTCATAT+TGG - chr2_3:3502601-3502620 Msa0272010:exon 45.0%
GGCGGTGAATGAATCGATTA+GGG - chr2_3:3502642-3502661 Msa0272010:CDS 45.0%
GGAAGTTCAGAAGGCTTATG+AGG - chr2_3:3502699-3502718 Msa0272010:CDS 45.0%
!! ATGGAGATTGATGGTGATGG+TGG - chr2_3:3502733-3502752 Msa0272010:CDS 45.0%
CGAACAGCATATCGAACAGA+AGG + chr2_3:3502805-3502824 None:intergenic 45.0%
!! GCTGTTCGTAGATTGATTCG+AGG - chr2_3:3502817-3502836 Msa0272010:CDS 45.0%
!!! AGGGTCTTGGTGTTTTACCA+AGG - chr2_3:3503569-3503588 Msa0272010:intron 45.0%
!! CTGGTGCTATCGACAAAATC+AGG - chr2_3:3503793-3503812 Msa0272010:CDS 45.0%
AAGCACCATATGCGAATAGG+CGG + chr2_3:3503991-3504010 None:intergenic 45.0%
! CCAAAGCACCATATGCGAAT+AGG + chr2_3:3503994-3504013 None:intergenic 45.0%
CCTATTCGCATATGGTGCTT+TGG - chr2_3:3503991-3504010 Msa0272010:CDS 45.0%
TCTCCCTTGCAAATAGGAAG+CGG - chr2_3:3504092-3504111 Msa0272010:intron 45.0%
GTACCGCTTCCTATTTGCAA+GGG + chr2_3:3504098-3504117 None:intergenic 45.0%
AGTACCGCTTCCTATTTGCA+AGG + chr2_3:3504099-3504118 None:intergenic 45.0%
! ATCACACCATAGTGGGAAAC+AGG + chr2_3:3504226-3504245 None:intergenic 45.0%
GTTTCCCACTATGGTGTGAT+TGG - chr2_3:3504226-3504245 Msa0272010:intron 45.0%
CAAAGCCAATCACACCATAG+TGG + chr2_3:3504234-3504253 None:intergenic 45.0%
!! CACTATGGTGTGATTGGCTT+TGG - chr2_3:3504232-3504251 Msa0272010:intron 45.0%
ACAACATGCACGTAAGGAGA+GGG + chr2_3:3504348-3504367 None:intergenic 45.0%
GTGTTTGCATGAGTTTGTGG+GGG + chr2_3:3504378-3504397 None:intergenic 45.0%
CGTGTTTGCATGAGTTTGTG+GGG + chr2_3:3504379-3504398 None:intergenic 45.0%
CACGTGTTTGCATGAGTTTG+TGG + chr2_3:3504381-3504400 None:intergenic 45.0%
TGTTATTGAAGCTCCTGGAC+TGG - chr2_3:3504573-3504592 Msa0272010:intron 45.0%
! TTGGTAGAGCTGAACGGATT+TGG + chr2_3:3504709-3504728 None:intergenic 45.0%
GTGATCGGCGGAGAAAAAAT+TGG + chr2_3:3504728-3504747 None:intergenic 45.0%
GGTCATGAGATGAGAAGAGA+AGG + chr2_3:3505076-3505095 None:intergenic 45.0%
CAAAGTTGTTCAGTGCCTGA+TGG - chr2_3:3505175-3505194 Msa0272010:CDS 45.0%
! GCTATACAGAAGCACAGCAA+TGG - chr2_3:3505308-3505327 Msa0272010:intron 45.0%
GGATGAAGATAATGCCTTGG+AGG - chr2_3:3505439-3505458 Msa0272010:intron 45.0%
TGAACAGCTGCAGTTGTTGT+TGG - chr2_3:3505775-3505794 Msa0272010:intron 45.0%
GCAAATGCTCATAAGGGAGA+GGG - chr2_3:3505797-3505816 Msa0272010:intron 45.0%
CAAATGCTCATAAGGGAGAG+GGG - chr2_3:3505798-3505817 Msa0272010:intron 45.0%
TACGAACCCAGATCATTAGG+CGG + chr2_3:3505851-3505870 None:intergenic 45.0%
CTTCCGGTCTTTAGATGATG+AGG - chr2_3:3505919-3505938 Msa0272010:CDS 45.0%
GGAAGCTACATTATCCAGAG+AGG - chr2_3:3505973-3505992 Msa0272010:CDS 45.0%
TTCCAATGAGGTTAGCAGCT+AGG - chr2_3:3506064-3506083 Msa0272010:CDS 45.0%
TACCTAGCTGCTAACCTCAT+TGG + chr2_3:3506069-3506088 None:intergenic 45.0%
TGTCAAGTGAGCAGTGAAAC+GGG + chr2_3:3506175-3506194 None:intergenic 45.0%
!! GCCTTTTCTAGGAACTCACA+TGG - chr2_3:3506229-3506248 Msa0272010:CDS 45.0%
!! AGCTCACTTGGTTTGGCTAA+GGG + chr2_3:3506463-3506482 None:intergenic 45.0%
GAAGGACTTGTAAGAGCAAC+TGG + chr2_3:3506687-3506706 None:intergenic 45.0%
AGTACTCGCTTGGACAAAGA+AGG + chr2_3:3506705-3506724 None:intergenic 45.0%
GAGAAGATGATGCAGAGGTT+GGG - chr2_3:3506797-3506816 Msa0272010:CDS 45.0%
AGAAGATGATGCAGAGGTTG+GGG - chr2_3:3506798-3506817 Msa0272010:CDS 45.0%
TGATCAATAGCAGACCGCAT+AGG + chr2_3:3506889-3506908 None:intergenic 45.0%
TATGCGGTCTGCTATTGATC+AGG - chr2_3:3506888-3506907 Msa0272010:CDS 45.0%
ACTGCTATGAGTCTGATGTC+TGG - chr2_3:3507064-3507083 Msa0272010:intron 45.0%
CTGCTATGAGTCTGATGTCT+GGG - chr2_3:3507065-3507084 Msa0272010:intron 45.0%
TGCTATGAGTCTGATGTCTG+GGG - chr2_3:3507066-3507085 Msa0272010:intron 45.0%
! GTGCCTTTTCCCATAAGGTT+TGG - chr2_3:3507383-3507402 Msa0272010:intron 45.0%
CTGCCAAACCTTATGGGAAA+AGG + chr2_3:3507389-3507408 None:intergenic 45.0%
GTAGTTGAGGCAGATGAAAC+TGG - chr2_3:3507985-3508004 Msa0272010:CDS 45.0%
ATGTTACACAGGTAAGCCTC+AGG - chr2_3:3508387-3508406 Msa0272010:intron 45.0%
GAGTACACAGTAAGAACCTG+AGG + chr2_3:3508406-3508425 None:intergenic 45.0%
! TGTGTGGGTTAACAAAGGCA+CGG + chr2_3:3508438-3508457 None:intergenic 45.0%
! AGCAGTGTGTGGGTTAACAA+AGG + chr2_3:3508443-3508462 None:intergenic 45.0%
CACTAACTTCAGCAGTGTGT+GGG + chr2_3:3508453-3508472 None:intergenic 45.0%
TCACTAACTTCAGCAGTGTG+TGG + chr2_3:3508454-3508473 None:intergenic 45.0%
! CAAGGCAGCTGATTTCTTTG+AGG + chr2_3:3508641-3508660 None:intergenic 45.0%
AATACAGCATGGCCAATCCA+TGG + chr2_3:3508859-3508878 None:intergenic 45.0%
!! TGGATTGGCCATGCTGTATT+TGG - chr2_3:3508859-3508878 Msa0272010:intron 45.0%
! CGAAGCACTTGAATTGGTGA+TGG - chr2_3:3508930-3508949 Msa0272010:intron 45.0%
ATTCTTCCCTTCACCACTCT+CGG + chr2_3:3508977-3508996 None:intergenic 45.0%
CTCCCATGCTATGAAAGAGT+TGG - chr2_3:3509035-3509054 Msa0272010:CDS 45.0%
!! GCTGCTTTGGAAACACAACT+TGG - chr2_3:3509186-3509205 Msa0272010:CDS 45.0%
! GCCTTCGGAAGGTGAATTTT+TGG - chr2_3:3509380-3509399 Msa0272010:CDS 45.0%
CACACATCACTCACTGCGTT+CGG - chr2_3:3502236-3502255 Msa0272010:three_prime_UTR 50.0%
CAAATCCGAACTTCCAGCTC+CGG - chr2_3:3502528-3502547 Msa0272010:three_prime_UTR 50.0%
AATATAGCCGAATCCGGAGC+TGG + chr2_3:3502544-3502563 None:intergenic 50.0%
AGCTCCGGATTCGGCTATAT+TGG - chr2_3:3502543-3502562 Msa0272010:three_prime_UTR 50.0%
! TAGTGGTGGTGATTCGTTGC+CGG - chr2_3:3502588-3502607 Msa0272010:three_prime_UTR 50.0%
CGGCGGTGAATGAATCGATT+AGG - chr2_3:3502641-3502660 Msa0272010:CDS 50.0%
TGAATCGATTAGGGAAGCGG+CGG - chr2_3:3502651-3502670 Msa0272010:CDS 50.0%
GTTCAGAAGGCTTATGAGGG+TGG - chr2_3:3502703-3502722 Msa0272010:CDS 50.0%
AAGGCTTATGAGGGTGGTCA+AGG - chr2_3:3502709-3502728 Msa0272010:CDS 50.0%
AGGCTTATGAGGGTGGTCAA+GGG - chr2_3:3502710-3502729 Msa0272010:CDS 50.0%
TTATGAGGGTGGTCAAGGGA+TGG - chr2_3:3502714-3502733 Msa0272010:CDS 50.0%
GGTCAAGGGATGGAGATTGA+TGG - chr2_3:3502724-3502743 Msa0272010:CDS 50.0%
!! GGGATGGAGATTGATGGTGA+TGG - chr2_3:3502730-3502749 Msa0272010:CDS 50.0%
!! TGGGAAAATCGTCGGCTTGT+TGG - chr2_3:3503912-3503931 Msa0272010:CDS 50.0%
!! GGGAAAATCGTCGGCTTGTT+GGG - chr2_3:3503913-3503932 Msa0272010:CDS 50.0%
! TATGGTGCTTTGGCTCGATC+AGG - chr2_3:3504001-3504020 Msa0272010:CDS 50.0%
AACATGCACGTAAGGAGAGG+GGG + chr2_3:3504346-3504365 None:intergenic 50.0%
CAACATGCACGTAAGGAGAG+GGG + chr2_3:3504347-3504366 None:intergenic 50.0%
CACAACATGCACGTAAGGAG+AGG + chr2_3:3504349-3504368 None:intergenic 50.0%
GCATGCACAACATGCACGTA+AGG + chr2_3:3504354-3504373 None:intergenic 50.0%
TCAAACCACTTGTCCAGTCC+AGG + chr2_3:3504589-3504608 None:intergenic 50.0%
ACTCAGGAAGGAGAGGTGAT+CGG + chr2_3:3504743-3504762 None:intergenic 50.0%
AGCCTCGTGTTCACAGTGTT+TGG - chr2_3:3504883-3504902 Msa0272010:intron 50.0%
GATGCCGCATCTTCCAATTG+TGG + chr2_3:3504945-3504964 None:intergenic 50.0%
CTGATCTGAAGGTTCCTCCA+AGG + chr2_3:3505456-3505475 None:intergenic 50.0%
GAACTCGTAACTTCTCGTCG+TGG + chr2_3:3505616-3505635 None:intergenic 50.0%
GGTCTGTTCACTGCATCTCT+TGG - chr2_3:3505668-3505687 Msa0272010:intron 50.0%
GGCAAATGCTCATAAGGGAG+AGG - chr2_3:3505796-3505815 Msa0272010:intron 50.0%
GTTGAGCCGCCTAATGATCT+GGG - chr2_3:3505842-3505861 Msa0272010:intron 50.0%
GACCGGAAGAGAGAAACTGA+AGG + chr2_3:3505908-3505927 None:intergenic 50.0%
!! CAGCTCACTTGGTTTGGCTA+AGG + chr2_3:3506464-3506483 None:intergenic 50.0%
GTACATCATCACTGCAGTCG+TGG + chr2_3:3506633-3506652 None:intergenic 50.0%
ATCATCTTCTCCAGGGGACT+CGG + chr2_3:3506788-3506807 None:intergenic 50.0%
CTCTGCATCATCTTCTCCAG+GGG + chr2_3:3506794-3506813 None:intergenic 50.0%
CCTCTGCATCATCTTCTCCA+GGG + chr2_3:3506795-3506814 None:intergenic 50.0%
ACCTCTGCATCATCTTCTCC+AGG + chr2_3:3506796-3506815 None:intergenic 50.0%
GGAGAAGATGATGCAGAGGT+TGG - chr2_3:3506796-3506815 Msa0272010:CDS 50.0%
TGGGGATGCACCTGAATTGA+TGG - chr2_3:3506816-3506835 Msa0272010:CDS 50.0%
CACAGTCATCAGCTCCTATG+CGG - chr2_3:3506872-3506891 Msa0272010:CDS 50.0%
ACCTGTATGCCAATATGGCG+CGG - chr2_3:3506995-3507014 Msa0272010:intron 50.0%
AATGCTAAGCCGCGCCATAT+TGG + chr2_3:3507007-3507026 None:intergenic 50.0%
GTCTGATGTCTGGGGAAAGA+TGG - chr2_3:3507074-3507093 Msa0272010:intron 50.0%
ACCTGCAAGACATCCAGATG+CGG - chr2_3:3507837-3507856 Msa0272010:CDS 50.0%
CAAGCTGAGACTGGTGAAAC+AGG - chr2_3:3507928-3507947 Msa0272010:intron 50.0%
GTGAAACAGGTGAGAGCGAT+GGG - chr2_3:3507941-3507960 Msa0272010:intron 50.0%
CGACTCTGAGTCTGTAGTTG+AGG - chr2_3:3507972-3507991 Msa0272010:intron 50.0%
TGAGGCAGATGAAACTGGTC+AGG - chr2_3:3507990-3508009 Msa0272010:CDS 50.0%
! GTGTGGGTTAACAAAGGCAC+GGG + chr2_3:3508437-3508456 None:intergenic 50.0%
GCAGCTCAGTCAGCGTATAT+CGG - chr2_3:3508474-3508493 Msa0272010:intron 50.0%
CAGCTCAGTCAGCGTATATC+GGG - chr2_3:3508475-3508494 Msa0272010:intron 50.0%
GACTCGCCGAAAGTCTGATT+TGG + chr2_3:3508911-3508930 None:intergenic 50.0%
! GCGAGTCGAAGCACTTGAAT+TGG - chr2_3:3508924-3508943 Msa0272010:intron 50.0%
AAGTCACTAGCAACCGAGAG+TGG - chr2_3:3508961-3508980 Msa0272010:intron 50.0%
TAGCAACCGAGAGTGGTGAA+GGG - chr2_3:3508968-3508987 Msa0272010:intron 50.0%
GCTCTTCTTGCCTGTTTGCT+TGG + chr2_3:3509072-3509091 None:intergenic 50.0%
AGCAGCAACCCTATATGTCC+TGG + chr2_3:3509250-3509269 None:intergenic 50.0%
!! CACTGCGTTCGGCTTTGTTG+AGG - chr2_3:3502247-3502266 Msa0272010:three_prime_UTR 55.0%
CGGAGCTGGAAGTTCGGATT+TGG + chr2_3:3502530-3502549 None:intergenic 55.0%
CGAATCCGGAGCTGGAAGTT+CGG + chr2_3:3502536-3502555 None:intergenic 55.0%
CGAACTTCCAGCTCCGGATT+CGG - chr2_3:3502534-3502553 Msa0272010:three_prime_UTR 55.0%
GTAGATTCAACTAGCGGCGG+CGG - chr2_3:3502565-3502584 Msa0272010:three_prime_UTR 55.0%
GGAAGCGGCGGTGAAACAAA+TGG - chr2_3:3502663-3502682 Msa0272010:CDS 55.0%
!! AGCTCTCTAGGGCCCTTGTT+TGG - chr2_3:3503153-3503172 Msa0272010:CDS 55.0%
CGCATGCCTGTTTCCCACTA+TGG - chr2_3:3504217-3504236 Msa0272010:intron 55.0%
GGAGAGGGGGCAGAAATGTT+TGG + chr2_3:3504333-3504352 None:intergenic 55.0%
! AAGCTCCTGGACTGGACAAG+TGG - chr2_3:3504581-3504600 Msa0272010:intron 55.0%
GTGAACACGAGGCTGACAGA+AGG + chr2_3:3504877-3504896 None:intergenic 55.0%
GGCCAAACACTGTGAACACG+AGG + chr2_3:3504888-3504907 None:intergenic 55.0%
CGTTGAGCCGCCTAATGATC+TGG - chr2_3:3505841-3505860 Msa0272010:intron 55.0%
!! CACACATCAGGGTGTTGGGT+GGG + chr2_3:3506487-3506506 None:intergenic 55.0%
!! ACACACATCAGGGTGTTGGG+TGG + chr2_3:3506488-3506507 None:intergenic 55.0%
GCAGCTTCTGAGTACTCGCT+TGG + chr2_3:3506715-3506734 None:intergenic 55.0%
TCTGATATTCCCGAGTCCCC+TGG - chr2_3:3506775-3506794 Msa0272010:CDS 55.0%
TCATCTTCTCCAGGGGACTC+GGG + chr2_3:3506787-3506806 None:intergenic 55.0%
CCCTGGAGAAGATGATGCAG+AGG - chr2_3:3506792-3506811 Msa0272010:CDS 55.0%
CGCATAGGAGCTGATGACTG+TGG + chr2_3:3506874-3506893 None:intergenic 55.0%
GCGGCTTAGCATTGCGTTAG+AGG - chr2_3:3507014-3507033 Msa0272010:intron 55.0%
!! TCACCGATGATGGGCTGATG+CGG - chr2_3:3507785-3507804 Msa0272010:CDS 55.0%
CATCCGCATCAGCCCATCAT+CGG + chr2_3:3507791-3507810 None:intergenic 55.0%
CCTGCAAGACATCCAGATGC+GGG - chr2_3:3507838-3507857 Msa0272010:CDS 55.0%
TCATCTGCACTTCCCGCATC+TGG + chr2_3:3507853-3507872 None:intergenic 55.0%
GGTGAAACAGGTGAGAGCGA+TGG - chr2_3:3507940-3507959 Msa0272010:intron 55.0%
CTAGCAACCGAGAGTGGTGA+AGG - chr2_3:3508967-3508986 Msa0272010:intron 55.0%
TCCTGAGGCTCAAGCTGCTT+TGG - chr2_3:3509173-3509192 Msa0272010:CDS 55.0%
TCCAAAGCAGCTTGAGCCTC+AGG + chr2_3:3509177-3509196 None:intergenic 55.0%
CTCTTGCAGTGTGCGCGACA+GGG - chr2_3:3503744-3503763 Msa0272010:CDS 60.0%
! GCGCGACAGGGTTTTGCTCT+AGG - chr2_3:3503756-3503775 Msa0272010:CDS 60.0%
CTGGGCCGCCTATTCGCATA+TGG - chr2_3:3503983-3504002 Msa0272010:CDS 60.0%
CAGGAAGGAGAGGTGATCGG+CGG + chr2_3:3504740-3504759 None:intergenic 60.0%
ACGACATCAGCCGAAGGACG+TGG + chr2_3:3505824-3505843 None:intergenic 60.0%
GGCTCAACGACATCAGCCGA+AGG + chr2_3:3505830-3505849 None:intergenic 60.0%
GGTGGGCAGCTCACTTGGTT+TGG + chr2_3:3506470-3506489 None:intergenic 60.0%
TGTTGGGTGGGCAGCTCACT+TGG + chr2_3:3506475-3506494 None:intergenic 60.0%
!! TCTCTGCGGCACTGATGAGC+AGG - chr2_3:3506600-3506619 Msa0272010:CDS 60.0%
!! GCGGCACTGATGAGCAGGAA+AGG - chr2_3:3506605-3506624 Msa0272010:CDS 60.0%
GCCGCGCCATATTGGCATAC+AGG + chr2_3:3506999-3507018 None:intergenic 60.0%
CCCGCATCTGGATGTCTTGC+AGG + chr2_3:3507841-3507860 None:intergenic 60.0%
TTGCGGAGTCCGAACTGCAG+AGG - chr2_3:3508737-3508756 Msa0272010:intron 60.0%
TCAACTAGCGGCGGCGGTAG+TGG - chr2_3:3502571-3502590 Msa0272010:three_prime_UTR 65.0%
GCTCTTGCAGTGTGCGCGAC+AGG - chr2_3:3503743-3503762 Msa0272010:CDS 65.0%
! ACTAGCGGCGGCGGTAGTGG+TGG - chr2_3:3502574-3502593 Msa0272010:three_prime_UTR 70.0%
GGGAGAGGGGCCACGTCCTT+CGG - chr2_3:3505811-3505830 Msa0272010:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 3502234 3509626 3502234 ID=Msa0272010;Name=Msa0272010
chr2_3 mRNA 3502234 3509626 3502234 ID=Msa0272010-mRNA-1;Parent=Msa0272010;Name=Msa0272010-mRNA-1;_AED=0.01;_eAED=0.01;_QI=118|0.85|0.87|1|1|1|8|381|1280
chr2_3 exon 3502234 3503462 3502234 ID=Msa0272010-mRNA-1:exon:1783;Parent=Msa0272010-mRNA-1
chr2_3 exon 3503581 3504100 3503581 ID=Msa0272010-mRNA-1:exon:1782;Parent=Msa0272010-mRNA-1
chr2_3 exon 3504951 3505238 3504951 ID=Msa0272010-mRNA-1:exon:1781;Parent=Msa0272010-mRNA-1
chr2_3 exon 3505866 3506993 3505866 ID=Msa0272010-mRNA-1:exon:1780;Parent=Msa0272010-mRNA-1
chr2_3 exon 3507086 3507313 3507086 ID=Msa0272010-mRNA-1:exon:1779;Parent=Msa0272010-mRNA-1
chr2_3 exon 3507698 3507895 3507698 ID=Msa0272010-mRNA-1:exon:1778;Parent=Msa0272010-mRNA-1
chr2_3 exon 3507982 3508107 3507982 ID=Msa0272010-mRNA-1:exon:1777;Parent=Msa0272010-mRNA-1
chr2_3 exon 3509002 3509626 3509002 ID=Msa0272010-mRNA-1:exon:1776;Parent=Msa0272010-mRNA-1
chr2_3 five_prime_UTR 3509509 3509626 3509509 ID=Msa0272010-mRNA-1:five_prime_utr;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3509002 3509508 3509002 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3507982 3508107 3507982 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3507698 3507895 3507698 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3507086 3507313 3507086 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3505866 3506993 3505866 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3504951 3505238 3504951 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3503581 3504100 3503581 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 CDS 3502615 3503462 3502615 ID=Msa0272010-mRNA-1:cds;Parent=Msa0272010-mRNA-1
chr2_3 three_prime_UTR 3502234 3502614 3502234 ID=Msa0272010-mRNA-1:three_prime_utr;Parent=Msa0272010-mRNA-1
Gene Sequence

>Msa0272010

ATGGGTAGCAAGAAAAGGAACAACGCCATAGAATCTCAAGATAAAGAACCTCTCAATAAAAAATTTAAGAACAACGATGATTCTATCGCTACACCATCTTCAACCAAACCAACAATGGAAAATCATAAGAAAAGCAAAGCATTCGATAAACAAAGACGCAGCGCCAAATCCAAATCCAAATCCGAACTTCCAGCTCCGGATTCGGCTATATTGGTAGATTCAACTAGCGGCGGCGGTAGTGGTGGTGATTCGTTGCCGGAGTTTCATATTGGTGTGTTTAAGGATTTAGCGGCGGTGAATGAATCGATTAGGGAAGCGGCGGTGAAACAAATGGTGAATGAGTTGAAGGAAGTTCAGAAGGCTTATGAGGGTGGTCAAGGGATGGAGATTGATGGTGATGGTGGTTTTAAGCTTGAAGCTGAGAAAAATGATGGGTTGGATGAATGTGCTCCTTCTGTTCGATATGCTGTTCGTAGATTGATTCGAGGTGTTTCTTCTTCAAGAGAGTGTGCGCGACAGGGTTTTGCTCTAGGTTTAACACTTTTAGCTGGTGCTATCGACAAAATCAGGGTTGACTCGTTCCTTAAACTCGTAGTAGATTTATTGGAAGTAACTTCATCAATGAAGGGTCAGGAAGCAAAAGATTGTCTTCTGGGCCGCCTATTCGCATATGGTGCTTTGGCTCGATCAGGAAGACTTATCCATGAATGGAGCAATGATAAAAATACTCCATACATCAAAGAATTTGTCGGTATACTTATCTCCCTTGCAAATAGGAAGCGGTACTTGCAAGAACCTGCCGTCTCAATAATTTTATACTTGGTTGAAAAGTTGCCTGTTGAAGCATTAGCGAATCATGTTATTGAAGCTCCTGGACTGGACAAGTGGTTTGAATCTGCTGCAGAAGTTGGAAATCCTGATGCTCTATTCCTTGCTTTAAAAGTTCGAGAGAAAATTTCTACAGACAGTTCCATTTATGGCAAACTACTACCAAATCCGTTCAGCTCTACCAATTTTTTCTCCGCCGATCACCTCTCCTTCCTGAGTAATTGTTTGAAGGAATCAACCTTCTGTCAGCCTCGTGTTCACAGTGTTTGGCCTGTTTTGATAAATATTCTTATACCCAATACTGTTCCACAATTGGAAGATGCGGCATCAGCTTCAAATTCATTAAAGAAACATAAGAAGAGTAGAAAATCTTGCTCTTCTGATGAAGAAATTGCGAAGAATCTCAAGTCTTTTTGTGAAATTATTATTGAAGGATCCCTTCTCTTCTCATCTCATGACCGTAAGCACTTAGCTTTCGATGTTATGTTTCTTCTTCTTCAAAAACTGTCTGCATCTTTAGTTCCAGTTGTTCTGTCAAACAAAGTTGTTCAGTGCCTGATGGATATACTATCAACCAACAACACATGGCTATATAAAGTTGGAAAACATTTTCTTAAACAATTGTCAGATTGGGTGGGTGACGATGATGTCAAAAGAGTTGCTGTTATAGTGGCTATACAGAAGCACAGCAATGGAAAATTTGACTGTATCACAAGGACAAAGCATGTTAAAGATTTGATGTCACAATTCAAAACAGAACCCGGTTGCATGCTTTTTATTCAAAATTTGATGAACCTGTTTGTGGATGAAGATAATGCCTTGGAGGAACCTTCAGATCAGAGTCAAACAACAGACGAAAATTCTGAAATAGGCTCTATTGAGGATAAAGAATCTCCTAGGACTAATGGGAATTCTGACTTTTTGAAGAGTTGGGTTATAGAATCTCTTCCTGGTATTTTGAAATTCTTAAAGCTGGACCACGACGAGAAGTTACGAGTTCAAAAGGAAATAATGAAGTTTATGGCTGTTCAGGGTCTGTTCACTGCATCTCTTGGCACTGAAGTGACTTCATTTGAGTTGGACGAGAAATTTAGGTGGCCAAAATCTCCCACATCAAATGCTCTTTGCAAGTTGTGTATTGAACAGCTGCAGTTGTTGTTGGCAAATGCTCATAAGGGAGAGGGGCCACGTCCTTCGGCTGATGTCGTTGAGCCGCCTAATGATCTGGGTTCGTACTTCATGAAATTCTTCAGCACCTTATGCAATATTCCTTCAGTTTCTCTCTTCCGGTCTTTAGATGATGAGGATGACAAAGCAGTAAAAGATTTGCAAGCAATGGAAGCTACATTATCCAGAGAGGAAAGGAGCCACGACTGCAGTGATGATGTACATAGAGATCATGCACTGAGATACTTGCTTATCCAGTTGCTCTTACAAGTCCTTCTTTGTCCAAGCGAGTACTCAGAAGCTGCGTCTGAACTCATCATCTGTTGTAAGAAAACATTTTCTACTTCTGATATTCCCGAGTCCCCTGGAGAAGATGATGCAGAGGTTGGGGATGCACCTGAATTGATGGATGTTCTTGTGGATACATTGCTCTCTCTGCTTCCACAGTCATCAGCTCCTATGCGGTCTGCTATTGATCAGGTGTTCAAATGCTTTTGCAATGATATCACCGATGATGGGCTGATGCGGATGTTGCGAGTCATAAAGAAAAATTTAAAACCTGCAAGACATCCAGATGCGGGAAGTGCAGATGAAGATGACGACGATGAAGATGATGACTTATTCAATATTGAAGATGAAGAAATTGATCAAGCTGAGACTGGTGAAACAGGTGAGAGCGATGGGCAGACTGACGACTCTGAGTCTGTAGTTGAGGCAGATGAAACTGGTCAGGACCACCCTGAAGATTCTGATGATTCAGATAGTGGGATGGATGATGATGCAATGTTCAGGATGGATACATATCTTGCTCAGATTTTCAAAGAGAAGAAAAGTCAGTCTGGAAGTGAAACTGCTCATTCCCAACTTTTGCTGTTCAAACTCCGCATCCTTTCATTATTGGAAATTTTTGTTCATGAAAATCCAGGCAAGTATACATTACTTCCGTCGTTTACCAGTTTTTGTGCTAGCTTTGTGTCTGTTATTATACTATTCTCCAATTGTAAGCCTCAGGTTCTTACTGTGTACTCACATTTGGCCCGTGCCTTTGTTAACCCACACACTGCTGAAGTTAGTGAGCAGCTCAGTCAGCGTATATCGGGAATATTGCAGAAGAAAATATTGAAAGCAAAGGATCATCCAAAGGGTGATGAAGTCCAATTATCGACACTTGAATCTCTCTTGGAGAGAAATTTGAAACTAGCATCAAAACCATTTAGGAAGCAAAAGTCTGCAACCAATCCCTCAAAGAAATCAGCTGCCTTGAACCGATATAAAATGGTTTCTTCCTTTGCCCAAAATTCTTCCTTTTGGATTTTGAAAATTGTCGATTCAAGAAATTTTGCGGAGTCCGAACTGCAGAGGATTGTTCAAATTTTCCAGAAAATATTGGTGGATTATTTTGACAGTAAGAAGTCTCAAGTAAAAGCTGCATTTTTAAAAGAAATATTTAAAAGAAGACCATGGATTGGCCATGCTGTATTTGGCTTTATTTTGGAAAGATGTGGAAGTGCCAAATCAGACTTTCGGCGAGTCGAAGCACTTGAATTGGTGATGGAAATATTGAAGTCACTAGCAACCGAGAGTGGTGAAGGGAAGAATTCATCGAAAAAGATTGTTAAAAGCAATTTAGATAAAATCTCCCATGCTATGAAAGAGTTGGTGACAAATATGCCAAGCAAACAGGCAAGAAGAGCAGAAGTACGTAAGTTCTGTGTCAAGGTCTTTGAGATCTTGTCGAAGCACAACCTCACCAAGTATCTTCTTAAAACATTGACTCCTGAGGCTCAAGCTGCTTTGGAAACACAACTTGGTGAGAAATTCCTTTGTTTGAAGAAACTGGAAAAATGA
Protein sequence

>Msa0272010

MGSKKRNNAIESQDKEPLNKKFKNNDDSIATPSSTKPTMENHKKSKAFDKQRRSAKSKSKSELPAPDSAILVDSTSGGGSGGDSLPEFHIGVFKDLAAVNESIREAAVKQMVNELKEVQKAYEGGQGMEIDGDGGFKLEAEKNDGLDECAPSVRYAVRRLIRGVSSSRECARQGFALGLTLLAGAIDKIRVDSFLKLVVDLLEVTSSMKGQEAKDCLLGRLFAYGALARSGRLIHEWSNDKNTPYIKEFVGILISLANRKRYLQEPAVSIILYLVEKLPVEALANHVIEAPGLDKWFESAAEVGNPDALFLALKVREKISTDSSIYGKLLPNPFSSTNFFSADHLSFLSNCLKESTFCQPRVHSVWPVLINILIPNTVPQLEDAASASNSLKKHKKSRKSCSSDEEIAKNLKSFCEIIIEGSLLFSSHDRKHLAFDVMFLLLQKLSASLVPVVLSNKVVQCLMDILSTNNTWLYKVGKHFLKQLSDWVGDDDVKRVAVIVAIQKHSNGKFDCITRTKHVKDLMSQFKTEPGCMLFIQNLMNLFVDEDNALEEPSDQSQTTDENSEIGSIEDKESPRTNGNSDFLKSWVIESLPGILKFLKLDHDEKLRVQKEIMKFMAVQGLFTASLGTEVTSFELDEKFRWPKSPTSNALCKLCIEQLQLLLANAHKGEGPRPSADVVEPPNDLGSYFMKFFSTLCNIPSVSLFRSLDDEDDKAVKDLQAMEATLSREERSHDCSDDVHRDHALRYLLIQLLLQVLLCPSEYSEAASELIICCKKTFSTSDIPESPGEDDAEVGDAPELMDVLVDTLLSLLPQSSAPMRSAIDQVFKCFCNDITDDGLMRMLRVIKKNLKPARHPDAGSADEDDDDEDDDLFNIEDEEIDQAETGETGESDGQTDDSESVVEADETGQDHPEDSDDSDSGMDDDAMFRMDTYLAQIFKEKKSQSGSETAHSQLLLFKLRILSLLEIFVHENPGKYTLLPSFTSFCASFVSVIILFSNCKPQVLTVYSHLARAFVNPHTAEVSEQLSQRISGILQKKILKAKDHPKGDEVQLSTLESLLERNLKLASKPFRKQKSATNPSKKSAALNRYKMVSSFAQNSSFWILKIVDSRNFAESELQRIVQIFQKILVDYFDSKKSQVKAAFLKEIFKRRPWIGHAVFGFILERCGSAKSDFRRVEALELVMEILKSLATESGEGKNSSKKIVKSNLDKISHAMKELVTNMPSKQARRAEVRKFCVKVFEILSKHNLTKYLLKTLTPEAQAALETQLGEKFLCLKKLEK*