Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312080 | POO01030.1 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 2.15e-94 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312080 | sp|P28551|TBB3_SOYBN | 97.744 | 133 | 3 | 0 | 1 | 133 | 1 | 133 | 7.23e-95 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312080 | A0A2P5FTC6 | 98.496 | 133 | 2 | 0 | 1 | 133 | 1 | 133 | 1.02e-94 | 285 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0116270 | Msa0312080 | 0.804710 | 1.895280e-49 | -8.615850e-47 |
| Msa0312080 | Msa0689760 | 0.816257 | 6.069097e-52 | -8.615850e-47 |
| Msa0312080 | Msa0716860 | 0.805227 | 1.477985e-49 | -8.615850e-47 |
| Msa0312080 | Msa0760770 | 0.803350 | 3.635618e-49 | -8.615850e-47 |
| Msa0312080 | Msa0789560 | 0.800408 | 1.461794e-48 | -8.615850e-47 |
| Msa0312080 | Msa1095790 | 0.825259 | 5.166379e-54 | -8.615850e-47 |
| Msa0312080 | Msa1420250 | 0.815404 | 9.404753e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312080 | MtrunA17_Chr2g0292921 | 99.248 | 133 | 1 | 0 | 1 | 133 | 1 | 133 | 2.96e-97 | 290 |
| Msa0312080 | MtrunA17_Chr4g0051631 | 94.737 | 133 | 7 | 0 | 1 | 133 | 1 | 133 | 4.86e-93 | 279 |
| Msa0312080 | MtrunA17_Chr4g0008361 | 91.729 | 133 | 11 | 0 | 1 | 133 | 1 | 133 | 1.04e-89 | 270 |
| Msa0312080 | MtrunA17_Chr4g0008401 | 92.481 | 133 | 10 | 0 | 1 | 133 | 1 | 133 | 1.33e-89 | 270 |
| Msa0312080 | MtrunA17_Chr4g0007371 | 90.909 | 132 | 12 | 0 | 1 | 132 | 1 | 132 | 2.98e-89 | 269 |
| Msa0312080 | MtrunA17_Chr1g0203181 | 90.226 | 133 | 13 | 0 | 1 | 133 | 1 | 133 | 3.00e-89 | 269 |
| Msa0312080 | MtrunA17_Chr7g0255791 | 89.474 | 133 | 14 | 0 | 1 | 133 | 1 | 133 | 3.73e-89 | 269 |
| Msa0312080 | MtrunA17_Chr8g0386781 | 88.722 | 133 | 15 | 0 | 1 | 133 | 1 | 133 | 1.46e-87 | 265 |
| Msa0312080 | MtrunA17_Chr3g0142731 | 89.630 | 135 | 12 | 1 | 1 | 133 | 1 | 135 | 2.51e-87 | 264 |
| Msa0312080 | MtrunA17_Chr8g0393021 | 85.821 | 134 | 18 | 1 | 1 | 133 | 1 | 134 | 1.73e-82 | 252 |
| Msa0312080 | MtrunA17_Chr8g0378821 | 46.667 | 135 | 70 | 1 | 1 | 133 | 1 | 135 | 3.70e-37 | 134 |
| Msa0312080 | MtrunA17_Chr3g0140821 | 44.444 | 135 | 73 | 1 | 1 | 133 | 1 | 135 | 1.71e-35 | 129 |
| Msa0312080 | MtrunA17_Chr4g0054511 | 43.704 | 135 | 74 | 1 | 1 | 133 | 1 | 135 | 7.15e-35 | 128 |
| Msa0312080 | MtrunA17_Chr6g0461281 | 44.118 | 136 | 73 | 1 | 1 | 133 | 1 | 136 | 2.11e-34 | 127 |
| Msa0312080 | MtrunA17_Chr7g0253411 | 42.963 | 135 | 75 | 1 | 1 | 133 | 1 | 135 | 2.24e-34 | 126 |
| Msa0312080 | MtrunA17_Chr1g0206881 | 42.963 | 135 | 75 | 1 | 1 | 133 | 1 | 135 | 3.78e-34 | 126 |
| Msa0312080 | MtrunA17_Chr2g0300671 | 42.105 | 133 | 74 | 2 | 1 | 133 | 1 | 130 | 3.68e-29 | 112 |
| Msa0312080 | MtrunA17_Chr2g0300491 | 42.537 | 134 | 72 | 3 | 1 | 133 | 1 | 130 | 4.61e-29 | 112 |
| Msa0312080 | MtrunA17_Chr7g0275431 | 36.296 | 135 | 83 | 2 | 2 | 134 | 3 | 136 | 9.74e-27 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312080 | AT1G20010.1 | 92.537 | 134 | 9 | 1 | 1 | 133 | 1 | 134 | 5.09e-91 | 274 |
| Msa0312080 | AT1G75780.1 | 91.791 | 134 | 10 | 1 | 1 | 133 | 1 | 134 | 6.24e-91 | 274 |
| Msa0312080 | AT5G44340.1 | 93.233 | 133 | 9 | 0 | 1 | 133 | 1 | 133 | 9.74e-91 | 273 |
| Msa0312080 | AT4G20890.1 | 91.729 | 133 | 11 | 0 | 1 | 133 | 1 | 133 | 1.70e-89 | 270 |
| Msa0312080 | AT5G12250.1 | 89.474 | 133 | 14 | 0 | 1 | 133 | 1 | 133 | 3.76e-89 | 269 |
| Msa0312080 | AT5G23860.2 | 90.226 | 133 | 13 | 0 | 1 | 133 | 1 | 133 | 4.83e-89 | 269 |
| Msa0312080 | AT5G23860.1 | 90.226 | 133 | 13 | 0 | 1 | 133 | 1 | 133 | 4.83e-89 | 269 |
| Msa0312080 | AT5G62690.1 | 90.977 | 133 | 12 | 0 | 1 | 133 | 1 | 133 | 4.91e-89 | 269 |
| Msa0312080 | AT5G62700.1 | 90.977 | 133 | 12 | 0 | 1 | 133 | 1 | 133 | 4.91e-89 | 269 |
| Msa0312080 | AT2G29550.1 | 91.729 | 133 | 11 | 0 | 1 | 133 | 1 | 133 | 1.49e-88 | 268 |
| Msa0312080 | AT5G19780.1 | 45.185 | 135 | 72 | 1 | 1 | 133 | 1 | 135 | 2.55e-36 | 132 |
| Msa0312080 | AT5G19770.1 | 45.185 | 135 | 72 | 1 | 1 | 133 | 1 | 135 | 2.55e-36 | 132 |
| Msa0312080 | AT1G64740.1 | 45.185 | 135 | 72 | 1 | 1 | 133 | 1 | 135 | 3.27e-36 | 132 |
| Msa0312080 | AT4G14960.1 | 44.444 | 135 | 73 | 1 | 1 | 133 | 1 | 135 | 1.24e-35 | 130 |
| Msa0312080 | AT4G14960.2 | 44.444 | 135 | 73 | 1 | 1 | 133 | 1 | 135 | 3.34e-35 | 129 |
| Msa0312080 | AT1G50010.1 | 43.704 | 135 | 74 | 1 | 1 | 133 | 1 | 135 | 2.20e-34 | 127 |
| Msa0312080 | AT1G04820.1 | 43.704 | 135 | 74 | 1 | 1 | 133 | 1 | 135 | 2.20e-34 | 127 |
| Msa0312080 | AT5G05620.1 | 37.037 | 135 | 82 | 2 | 2 | 134 | 3 | 136 | 3.49e-27 | 107 |
| Msa0312080 | AT3G61650.1 | 37.037 | 135 | 82 | 2 | 2 | 134 | 3 | 136 | 4.48e-27 | 107 |
Find 75 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAAATTATGGAAAATTT+AGG | 0.108177 | 2_4:-7072501 | None:intergenic |
| GCAAATTACTTCCCAGAATT+TGG | 0.120800 | 2_4:-7072582 | None:intergenic |
| ACCAAATCGGCGCCAAATTC+TGG | 0.170796 | 2_4:+7072570 | Msa0312080:CDS |
| CGTTCCACGCGCTGTTCTTA+TGG | 0.191476 | 2_4:+7072706 | Msa0312080:CDS |
| ATCTGTCTTCTTTGTCTTGA+TGG | 0.227904 | 2_4:-7073936 | None:intergenic |
| ATTGAATTTGAAGGAATAAA+TGG | 0.238771 | 2_4:-7072421 | None:intergenic |
| AGTCTGGTGCTGGGAATAAT+TGG | 0.257572 | 2_4:+7072810 | Msa0312080:CDS |
| GGATCTTGAACCTGGTACTA+TGG | 0.258147 | 2_4:+7072727 | Msa0312080:CDS |
| GATGACAACCTCGACTTCTA+AGG | 0.267849 | 2_4:+7073847 | Msa0312080:CDS |
| TAGTGGTGGGGAGGATTTAA+AGG | 0.289287 | 2_4:-7072390 | None:intergenic |
| GGAAAATTATGGAAAATTTA+GGG | 0.294511 | 2_4:-7072500 | None:intergenic |
| CCCAGAATTTGGCGCCGATT+TGG | 0.298478 | 2_4:-7072571 | None:intergenic |
| TCTCCTGAATAACAGATTCT+TGG | 0.302395 | 2_4:-7073811 | None:intergenic |
| TCGCCAAGAATCTGTTATTC+AGG | 0.306275 | 2_4:+7073808 | Msa0312080:CDS |
| GATTCTTGGCGATAAGATTC+TGG | 0.307582 | 2_4:-7073797 | None:intergenic |
| GTATTCGGTCAGTCTGGTGC+TGG | 0.372974 | 2_4:+7072800 | Msa0312080:CDS |
| AGAAGTCGAGGTTGTCATCT+TGG | 0.375138 | 2_4:-7073843 | None:intergenic |
| TCCGTTAGATCCGGTCCGTT+TGG | 0.380209 | 2_4:+7072752 | Msa0312080:CDS |
| ATCAATAAGCTCAGCGCCTT+CGG | 0.385551 | 2_4:-7072849 | None:intergenic |
| CGCATTGTCCGCCTTGGATG+TGG | 0.401436 | 2_4:-7072544 | None:intergenic |
| GAAGTCGAGGTTGTCATCTT+GGG | 0.401780 | 2_4:-7073842 | None:intergenic |
| GCCTTCGGTATAATGACCTT+TGG | 0.402288 | 2_4:-7072834 | None:intergenic |
| AGAGGATTCATGTTTGTAGA+AGG | 0.419287 | 2_4:-7073882 | None:intergenic |
| CCAAATCGGCGCCAAATTCT+GGG | 0.428149 | 2_4:+7072571 | Msa0312080:CDS |
| GATACGTTCAAGTTGAAGTT+CGG | 0.429716 | 2_4:-7072648 | None:intergenic |
| GGTTCCCGCATTGTCCGCCT+TGG | 0.446623 | 2_4:-7072550 | None:intergenic |
| GTCTGGTGCTGGGAATAATT+GGG | 0.450039 | 2_4:+7072811 | Msa0312080:CDS |
| GTCTTCTTTGTCTTGATGGA+AGG | 0.451516 | 2_4:-7073932 | None:intergenic |
| TGGTGGGGAGGATTTAAAGG+AGG | 0.463167 | 2_4:-7072387 | None:intergenic |
| GAGAATTGTGATTGCTTGCA+AGG | 0.495773 | 2_4:+7072902 | Msa0312080:CDS |
| GGACAATGCGGGAACCAAAT+CGG | 0.495801 | 2_4:+7072557 | Msa0312080:CDS |
| TGTAAAAGGAGGGAAGGAAC+GGG | 0.496181 | 2_4:-7072460 | None:intergenic |
| AGATTCTGGTAAAGCAAAGT+TGG | 0.500254 | 2_4:-7073783 | None:intergenic |
| AGGAGGCTGTGATTCTAGAT+TGG | 0.501799 | 2_4:-7073962 | None:intergenic |
| TTCTTTGTCTTGATGGAAGG+TGG | 0.503502 | 2_4:-7073929 | None:intergenic |
| TGCTTCTTGTGAATCTGAAG+AGG | 0.503979 | 2_4:-7073900 | None:intergenic |
| GTGGGGAGGATTTAAAGGAG+GGG | 0.505927 | 2_4:-7072385 | None:intergenic |
| GGATTCATGTTTGTAGAAGG+TGG | 0.507051 | 2_4:-7073879 | None:intergenic |
| ACATCCAAGGCGGACAATGC+GGG | 0.508092 | 2_4:+7072546 | Msa0312080:CDS |
| TATTCGGTCAGTCTGGTGCT+GGG | 0.523291 | 2_4:+7072801 | Msa0312080:CDS |
| ATGTAAAAGGAGGGAAGGAA+CGG | 0.524028 | 2_4:-7072461 | None:intergenic |
| TGGAACGTACCTTCCACCAC+TGG | 0.531376 | 2_4:-7072690 | None:intergenic |
| ACCAAACGGACCGGATCTAA+CGG | 0.534715 | 2_4:-7072753 | None:intergenic |
| GGTGGGGAGGATTTAAAGGA+GGG | 0.543741 | 2_4:-7072386 | None:intergenic |
| TGACCGAATACAAAATTATC+CGG | 0.543879 | 2_4:-7072788 | None:intergenic |
| CTAACGGAATCCATAGTACC+AGG | 0.550782 | 2_4:-7072737 | None:intergenic |
| GAAGTAATTTGCGACGAGCA+CGG | 0.550951 | 2_4:+7072593 | Msa0312080:CDS |
| ATGACAACCTCGACTTCTAA+GGG | 0.551737 | 2_4:+7073848 | Msa0312080:CDS |
| TTTGAAGGAATAAATGGAAG+GGG | 0.555985 | 2_4:-7072415 | None:intergenic |
| GGACGAAAGATCTGACCAAA+CGG | 0.560082 | 2_4:-7072767 | None:intergenic |
| ACTATGGATTCCGTTAGATC+CGG | 0.561697 | 2_4:+7072743 | Msa0312080:CDS |
| GTTTGGTCAGATCTTTCGTC+CGG | 0.564080 | 2_4:+7072769 | Msa0312080:CDS |
| TTGTGATGTAAAAGGAGGGA+AGG | 0.566392 | 2_4:-7072466 | None:intergenic |
| GTTCTTATGGATCTTGAACC+TGG | 0.570029 | 2_4:+7072719 | Msa0312080:CDS |
| GCCAAAGGTCATTATACCGA+AGG | 0.575459 | 2_4:+7072833 | Msa0312080:CDS |
| GCTGGGAATAATTGGGCCAA+AGG | 0.582199 | 2_4:+7072818 | Msa0312080:CDS |
| AATTTGAAGGAATAAATGGA+AGG | 0.586500 | 2_4:-7072417 | None:intergenic |
| AAAGATCTGACCAAACGGAC+CGG | 0.588290 | 2_4:-7072762 | None:intergenic |
| CACATCCAAGGCGGACAATG+CGG | 0.592637 | 2_4:+7072545 | Msa0312080:CDS |
| AGAGAAATCCTCCACATCCA+AGG | 0.593831 | 2_4:+7072533 | Msa0312080:CDS |
| ATTTGAAGGAATAAATGGAA+GGG | 0.596849 | 2_4:-7072416 | None:intergenic |
| AAAAGGAGGGAAGGAACGGG+TGG | 0.602432 | 2_4:-7072457 | None:intergenic |
| ATTGTCCGCCTTGGATGTGG+AGG | 0.602768 | 2_4:-7072541 | None:intergenic |
| TAATTGTGGGGTTGTACTCG+AGG | 0.611164 | 2_4:-7072354 | None:intergenic |
| ACAATGAAGCCAGTGGTGGA+AGG | 0.613831 | 2_4:+7072681 | Msa0312080:CDS |
| TTTGTTGTGATGTAAAAGGA+GGG | 0.618219 | 2_4:-7072470 | None:intergenic |
| TTGAAGGAATAAATGGAAGG+GGG | 0.623829 | 2_4:-7072414 | None:intergenic |
| TATTACAATGAAGCCAGTGG+TGG | 0.624350 | 2_4:+7072677 | Msa0312080:CDS |
| AATTGTGGGGTTGTACTCGA+GGG | 0.651489 | 2_4:-7072353 | None:intergenic |
| AAGTTGGCATAATAATGAGA+AGG | 0.653463 | 2_4:-7073767 | None:intergenic |
| GTCTATTACAATGAAGCCAG+TGG | 0.654009 | 2_4:+7072674 | Msa0312080:CDS |
| AGATCCATAAGAACAGCGCG+TGG | 0.666492 | 2_4:-7072710 | None:intergenic |
| GATCACACCGGAAAATACAA+CGG | 0.700192 | 2_4:+7072620 | Msa0312080:CDS |
| GAAATCCTCCACATCCAAGG+CGG | 0.734127 | 2_4:+7072536 | Msa0312080:CDS |
| GAGCACGGAATTGATCACAC+CGG | 0.781288 | 2_4:+7072608 | Msa0312080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATTAATAGTATTATT+TGG | + | chr2_4:7073370-7073389 | Msa0312080:intron | 10.0% |
| !! | AATGAATTAATAGTATTATT+TGG | + | chr2_4:7073370-7073389 | Msa0312080:intron | 10.0% |
| !! | TAAATGATTATGAATTGTTA+TGG | + | chr2_4:7073403-7073422 | Msa0312080:intron | 15.0% |
| !! | TAAATGATTATGAATTGTTA+TGG | + | chr2_4:7073403-7073422 | Msa0312080:intron | 15.0% |
| !! | ATTGAATTTGAAGGAATAAA+TGG | - | chr2_4:7072424-7072443 | None:intergenic | 20.0% |
| !! | GGAAAATTATGGAAAATTTA+GGG | - | chr2_4:7072503-7072522 | None:intergenic | 20.0% |
| !! | TACTATTAATTCATTCCAAT+CGG | - | chr2_4:7073365-7073384 | None:intergenic | 20.0% |
| !!! | TGATTTTTATTGTTTTTGTG+TGG | + | chr2_4:7073434-7073453 | Msa0312080:intron | 20.0% |
| !! | ATTGAATTTGAAGGAATAAA+TGG | - | chr2_4:7072424-7072443 | None:intergenic | 20.0% |
| !! | GGAAAATTATGGAAAATTTA+GGG | - | chr2_4:7072503-7072522 | None:intergenic | 20.0% |
| !! | TACTATTAATTCATTCCAAT+CGG | - | chr2_4:7073365-7073384 | None:intergenic | 20.0% |
| !!! | TGATTTTTATTGTTTTTGTG+TGG | + | chr2_4:7073434-7073453 | Msa0312080:intron | 20.0% |
| ! | ATTTGAAGGAATAAATGGAA+GGG | - | chr2_4:7072419-7072438 | None:intergenic | 25.0% |
| ! | AATTTGAAGGAATAAATGGA+AGG | - | chr2_4:7072420-7072439 | None:intergenic | 25.0% |
| !!! | GATGTTTTGATTGAATTTGA+AGG | - | chr2_4:7072433-7072452 | None:intergenic | 25.0% |
| !!! | TGATTTTGTTGTGATGTAAA+AGG | - | chr2_4:7072477-7072496 | None:intergenic | 25.0% |
| ! | GGGAAAATTATGGAAAATTT+AGG | - | chr2_4:7072504-7072523 | None:intergenic | 25.0% |
| !!! | CATCGTTTTTGTTTTTAGTA+AGG | + | chr2_4:7072943-7072962 | Msa0312080:intron | 25.0% |
| !!! | CGATGTTGAATATCATTTTT+TGG | + | chr2_4:7073195-7073214 | Msa0312080:intron | 25.0% |
| ! | AAAAAACTCGCAACATAAAA+CGG | - | chr2_4:7073278-7073297 | None:intergenic | 25.0% |
| ! | ATTTGAAGGAATAAATGGAA+GGG | - | chr2_4:7072419-7072438 | None:intergenic | 25.0% |
| ! | AATTTGAAGGAATAAATGGA+AGG | - | chr2_4:7072420-7072439 | None:intergenic | 25.0% |
| !!! | GATGTTTTGATTGAATTTGA+AGG | - | chr2_4:7072433-7072452 | None:intergenic | 25.0% |
| !!! | TGATTTTGTTGTGATGTAAA+AGG | - | chr2_4:7072477-7072496 | None:intergenic | 25.0% |
| ! | GGGAAAATTATGGAAAATTT+AGG | - | chr2_4:7072504-7072523 | None:intergenic | 25.0% |
| !!! | CATCGTTTTTGTTTTTAGTA+AGG | + | chr2_4:7072943-7072962 | Msa0312080:intron | 25.0% |
| !!! | CGATGTTGAATATCATTTTT+TGG | + | chr2_4:7073195-7073214 | Msa0312080:intron | 25.0% |
| ! | AAAAAACTCGCAACATAAAA+CGG | - | chr2_4:7073278-7073297 | None:intergenic | 25.0% |
| TTTGAAGGAATAAATGGAAG+GGG | - | chr2_4:7072418-7072437 | None:intergenic | 30.0% | |
| ! | TTTGTTGTGATGTAAAAGGA+GGG | - | chr2_4:7072473-7072492 | None:intergenic | 30.0% |
| !! | TTTTGTTGTGATGTAAAAGG+AGG | - | chr2_4:7072474-7072493 | None:intergenic | 30.0% |
| ! | TCATTTTCTCGGGAAAATTA+TGG | - | chr2_4:7072514-7072533 | None:intergenic | 30.0% |
| TGACCGAATACAAAATTATC+CGG | - | chr2_4:7072791-7072810 | None:intergenic | 30.0% | |
| ATAATTGCGATGTTGAATTG+CGG | + | chr2_4:7073009-7073028 | Msa0312080:intron | 30.0% | |
| GAAAATTATGATTGCTTGCA+AGG | + | chr2_4:7073244-7073263 | Msa0312080:intron | 30.0% | |
| !!! | TTTTATTGTTTTTGTGTGGC+AGG | + | chr2_4:7073438-7073457 | Msa0312080:intron | 30.0% |
| ! | ATTTCAAGTGTGTCATTCAT+TGG | + | chr2_4:7073461-7073480 | Msa0312080:intron | 30.0% |
| ! | TTTCAAGTGTGTCATTCATT+GGG | + | chr2_4:7073462-7073481 | Msa0312080:intron | 30.0% |
| !! | TTTCTTTTCTTTTTGGTCGA+AGG | - | chr2_4:7073596-7073615 | None:intergenic | 30.0% |
| GACCAAAAAGAAAAGAAATC+AGG | + | chr2_4:7073598-7073617 | Msa0312080:intron | 30.0% | |
| ! | GTCCTGATTTCTTTTCTTTT+TGG | - | chr2_4:7073603-7073622 | None:intergenic | 30.0% |
| AAGTTGGCATAATAATGAGA+AGG | - | chr2_4:7073770-7073789 | None:intergenic | 30.0% | |
| TTTGAAGGAATAAATGGAAG+GGG | - | chr2_4:7072418-7072437 | None:intergenic | 30.0% | |
| ! | TTTGTTGTGATGTAAAAGGA+GGG | - | chr2_4:7072473-7072492 | None:intergenic | 30.0% |
| !! | TTTTGTTGTGATGTAAAAGG+AGG | - | chr2_4:7072474-7072493 | None:intergenic | 30.0% |
| ! | TCATTTTCTCGGGAAAATTA+TGG | - | chr2_4:7072514-7072533 | None:intergenic | 30.0% |
| TGACCGAATACAAAATTATC+CGG | - | chr2_4:7072791-7072810 | None:intergenic | 30.0% | |
| ATAATTGCGATGTTGAATTG+CGG | + | chr2_4:7073009-7073028 | Msa0312080:intron | 30.0% | |
| GAAAATTATGATTGCTTGCA+AGG | + | chr2_4:7073244-7073263 | Msa0312080:intron | 30.0% | |
| !!! | TTTTATTGTTTTTGTGTGGC+AGG | + | chr2_4:7073438-7073457 | Msa0312080:intron | 30.0% |
| ! | ATTTCAAGTGTGTCATTCAT+TGG | + | chr2_4:7073461-7073480 | Msa0312080:intron | 30.0% |
| ! | TTTCAAGTGTGTCATTCATT+GGG | + | chr2_4:7073462-7073481 | Msa0312080:intron | 30.0% |
| !! | TTTCTTTTCTTTTTGGTCGA+AGG | - | chr2_4:7073596-7073615 | None:intergenic | 30.0% |
| GACCAAAAAGAAAAGAAATC+AGG | + | chr2_4:7073598-7073617 | Msa0312080:intron | 30.0% | |
| ! | GTCCTGATTTCTTTTCTTTT+TGG | - | chr2_4:7073603-7073622 | None:intergenic | 30.0% |
| AAGTTGGCATAATAATGAGA+AGG | - | chr2_4:7073770-7073789 | None:intergenic | 30.0% | |
| ! | AGGGGTTTTTGTGTAATTGT+GGG | - | chr2_4:7072370-7072389 | None:intergenic | 35.0% |
| TTGAAGGAATAAATGGAAGG+GGG | - | chr2_4:7072417-7072436 | None:intergenic | 35.0% | |
| ! | AGGATTTCTCTCATTTTCTC+GGG | - | chr2_4:7072524-7072543 | None:intergenic | 35.0% |
| ! | GAGGATTTCTCTCATTTTCT+CGG | - | chr2_4:7072525-7072544 | None:intergenic | 35.0% |
| GCAAATTACTTCCCAGAATT+TGG | - | chr2_4:7072585-7072604 | None:intergenic | 35.0% | |
| !! | GATACGTTCAAGTTGAAGTT+CGG | - | chr2_4:7072651-7072670 | None:intergenic | 35.0% |
| ! | CGTCCGGATAATTTTGTATT+CGG | + | chr2_4:7072785-7072804 | Msa0312080:CDS | 35.0% |
| ! | AATTTTGTATTCGGTCAGTC+TGG | + | chr2_4:7072794-7072813 | Msa0312080:CDS | 35.0% |
| ! | TATATTGTGAGTTTGTTCGC+AGG | + | chr2_4:7073043-7073062 | Msa0312080:intron | 35.0% |
| TTCACTCATTCAGATCGAAT+AGG | - | chr2_4:7073127-7073146 | None:intergenic | 35.0% | |
| !!! | ATTTTTTGGCGATGTTGAAC+TGG | + | chr2_4:7073209-7073228 | Msa0312080:intron | 35.0% |
| TTTCGATGAATTTCACCGAT+TGG | + | chr2_4:7073347-7073366 | Msa0312080:intron | 35.0% | |
| ! | CTTTTGAGCTGAGTAAAACT+AGG | - | chr2_4:7073746-7073765 | None:intergenic | 35.0% |
| AGATTCTGGTAAAGCAAAGT+TGG | - | chr2_4:7073786-7073805 | None:intergenic | 35.0% | |
| TCTCCTGAATAACAGATTCT+TGG | - | chr2_4:7073814-7073833 | None:intergenic | 35.0% | |
| AGAGGATTCATGTTTGTAGA+AGG | - | chr2_4:7073885-7073904 | None:intergenic | 35.0% | |
| ATCTGTCTTCTTTGTCTTGA+TGG | - | chr2_4:7073939-7073958 | None:intergenic | 35.0% | |
| ! | AGGGGTTTTTGTGTAATTGT+GGG | - | chr2_4:7072370-7072389 | None:intergenic | 35.0% |
| TTGAAGGAATAAATGGAAGG+GGG | - | chr2_4:7072417-7072436 | None:intergenic | 35.0% | |
| ! | AGGATTTCTCTCATTTTCTC+GGG | - | chr2_4:7072524-7072543 | None:intergenic | 35.0% |
| ! | GAGGATTTCTCTCATTTTCT+CGG | - | chr2_4:7072525-7072544 | None:intergenic | 35.0% |
| GCAAATTACTTCCCAGAATT+TGG | - | chr2_4:7072585-7072604 | None:intergenic | 35.0% | |
| !! | GATACGTTCAAGTTGAAGTT+CGG | - | chr2_4:7072651-7072670 | None:intergenic | 35.0% |
| ! | CGTCCGGATAATTTTGTATT+CGG | + | chr2_4:7072785-7072804 | Msa0312080:CDS | 35.0% |
| ! | AATTTTGTATTCGGTCAGTC+TGG | + | chr2_4:7072794-7072813 | Msa0312080:CDS | 35.0% |
| ! | TATATTGTGAGTTTGTTCGC+AGG | + | chr2_4:7073043-7073062 | Msa0312080:intron | 35.0% |
| TTCACTCATTCAGATCGAAT+AGG | - | chr2_4:7073127-7073146 | None:intergenic | 35.0% | |
| !!! | ATTTTTTGGCGATGTTGAAC+TGG | + | chr2_4:7073209-7073228 | Msa0312080:intron | 35.0% |
| TTTCGATGAATTTCACCGAT+TGG | + | chr2_4:7073347-7073366 | Msa0312080:intron | 35.0% | |
| ! | CTTTTGAGCTGAGTAAAACT+AGG | - | chr2_4:7073746-7073765 | None:intergenic | 35.0% |
| AGATTCTGGTAAAGCAAAGT+TGG | - | chr2_4:7073786-7073805 | None:intergenic | 35.0% | |
| TCTCCTGAATAACAGATTCT+TGG | - | chr2_4:7073814-7073833 | None:intergenic | 35.0% | |
| AGAGGATTCATGTTTGTAGA+AGG | - | chr2_4:7073885-7073904 | None:intergenic | 35.0% | |
| ATCTGTCTTCTTTGTCTTGA+TGG | - | chr2_4:7073939-7073958 | None:intergenic | 35.0% | |
| !!! | ACTCGAGGGTATTTTTGGAA+GGG | - | chr2_4:7072342-7072361 | None:intergenic | 40.0% |
| !!! | TACTCGAGGGTATTTTTGGA+AGG | - | chr2_4:7072343-7072362 | None:intergenic | 40.0% |
| !!! | GTTGTACTCGAGGGTATTTT+TGG | - | chr2_4:7072347-7072366 | None:intergenic | 40.0% |
| ! | GGGGTTTTTGTGTAATTGTG+GGG | - | chr2_4:7072369-7072388 | None:intergenic | 40.0% |
| ! | GAGGGGTTTTTGTGTAATTG+TGG | - | chr2_4:7072371-7072390 | None:intergenic | 40.0% |
| AATAAATGGAAGGGGGTTAG+TGG | - | chr2_4:7072410-7072429 | None:intergenic | 40.0% | |
| ATGTAAAAGGAGGGAAGGAA+CGG | - | chr2_4:7072464-7072483 | None:intergenic | 40.0% | |
| TTGTGATGTAAAAGGAGGGA+AGG | - | chr2_4:7072469-7072488 | None:intergenic | 40.0% | |
| GATCACACCGGAAAATACAA+CGG | + | chr2_4:7072620-7072639 | Msa0312080:CDS | 40.0% | |
| GTCTATTACAATGAAGCCAG+TGG | + | chr2_4:7072674-7072693 | Msa0312080:CDS | 40.0% | |
| TATTACAATGAAGCCAGTGG+TGG | + | chr2_4:7072677-7072696 | Msa0312080:CDS | 40.0% | |
| GTTCTTATGGATCTTGAACC+TGG | + | chr2_4:7072719-7072738 | Msa0312080:CDS | 40.0% | |
| ACTATGGATTCCGTTAGATC+CGG | + | chr2_4:7072743-7072762 | Msa0312080:CDS | 40.0% | |
| GAGAATTGTGATTGCTTGCA+AGG | + | chr2_4:7072902-7072921 | Msa0312080:CDS | 40.0% | |
| CATTGCTAAGAACGAACGAA+AGG | - | chr2_4:7073312-7073331 | None:intergenic | 40.0% | |
| ! | GTTGGAGAATCGACTTCTTA+TGG | - | chr2_4:7073690-7073709 | None:intergenic | 40.0% |
| GTAAAACTAGGAGTGAAAGC+TGG | - | chr2_4:7073734-7073753 | None:intergenic | 40.0% | |
| GATTCTTGGCGATAAGATTC+TGG | - | chr2_4:7073800-7073819 | None:intergenic | 40.0% | |
| TCGCCAAGAATCTGTTATTC+AGG | + | chr2_4:7073808-7073827 | Msa0312080:CDS | 40.0% | |
| ATGACAACCTCGACTTCTAA+GGG | + | chr2_4:7073848-7073867 | Msa0312080:CDS | 40.0% | |
| ! | TTCTTTTCCCTTAGAAGTCG+AGG | - | chr2_4:7073858-7073877 | None:intergenic | 40.0% |
| GGATTCATGTTTGTAGAAGG+TGG | - | chr2_4:7073882-7073901 | None:intergenic | 40.0% | |
| TGCTTCTTGTGAATCTGAAG+AGG | - | chr2_4:7073903-7073922 | None:intergenic | 40.0% | |
| TTCTTTGTCTTGATGGAAGG+TGG | - | chr2_4:7073932-7073951 | None:intergenic | 40.0% | |
| GTCTTCTTTGTCTTGATGGA+AGG | - | chr2_4:7073935-7073954 | None:intergenic | 40.0% | |
| !!! | ACTCGAGGGTATTTTTGGAA+GGG | - | chr2_4:7072342-7072361 | None:intergenic | 40.0% |
| !!! | TACTCGAGGGTATTTTTGGA+AGG | - | chr2_4:7072343-7072362 | None:intergenic | 40.0% |
| !!! | GTTGTACTCGAGGGTATTTT+TGG | - | chr2_4:7072347-7072366 | None:intergenic | 40.0% |
| ! | GGGGTTTTTGTGTAATTGTG+GGG | - | chr2_4:7072369-7072388 | None:intergenic | 40.0% |
| ! | GAGGGGTTTTTGTGTAATTG+TGG | - | chr2_4:7072371-7072390 | None:intergenic | 40.0% |
| AATAAATGGAAGGGGGTTAG+TGG | - | chr2_4:7072410-7072429 | None:intergenic | 40.0% | |
| ATGTAAAAGGAGGGAAGGAA+CGG | - | chr2_4:7072464-7072483 | None:intergenic | 40.0% | |
| TTGTGATGTAAAAGGAGGGA+AGG | - | chr2_4:7072469-7072488 | None:intergenic | 40.0% | |
| GATCACACCGGAAAATACAA+CGG | + | chr2_4:7072620-7072639 | Msa0312080:CDS | 40.0% | |
| GTCTATTACAATGAAGCCAG+TGG | + | chr2_4:7072674-7072693 | Msa0312080:CDS | 40.0% | |
| TATTACAATGAAGCCAGTGG+TGG | + | chr2_4:7072677-7072696 | Msa0312080:CDS | 40.0% | |
| GTTCTTATGGATCTTGAACC+TGG | + | chr2_4:7072719-7072738 | Msa0312080:CDS | 40.0% | |
| ACTATGGATTCCGTTAGATC+CGG | + | chr2_4:7072743-7072762 | Msa0312080:CDS | 40.0% | |
| GAGAATTGTGATTGCTTGCA+AGG | + | chr2_4:7072902-7072921 | Msa0312080:CDS | 40.0% | |
| CATTGCTAAGAACGAACGAA+AGG | - | chr2_4:7073312-7073331 | None:intergenic | 40.0% | |
| ! | GTTGGAGAATCGACTTCTTA+TGG | - | chr2_4:7073690-7073709 | None:intergenic | 40.0% |
| GTAAAACTAGGAGTGAAAGC+TGG | - | chr2_4:7073734-7073753 | None:intergenic | 40.0% | |
| GATTCTTGGCGATAAGATTC+TGG | - | chr2_4:7073800-7073819 | None:intergenic | 40.0% | |
| TCGCCAAGAATCTGTTATTC+AGG | + | chr2_4:7073808-7073827 | Msa0312080:CDS | 40.0% | |
| ATGACAACCTCGACTTCTAA+GGG | + | chr2_4:7073848-7073867 | Msa0312080:CDS | 40.0% | |
| ! | TTCTTTTCCCTTAGAAGTCG+AGG | - | chr2_4:7073858-7073877 | None:intergenic | 40.0% |
| GGATTCATGTTTGTAGAAGG+TGG | - | chr2_4:7073882-7073901 | None:intergenic | 40.0% | |
| TGCTTCTTGTGAATCTGAAG+AGG | - | chr2_4:7073903-7073922 | None:intergenic | 40.0% | |
| TTCTTTGTCTTGATGGAAGG+TGG | - | chr2_4:7073932-7073951 | None:intergenic | 40.0% | |
| GTCTTCTTTGTCTTGATGGA+AGG | - | chr2_4:7073935-7073954 | None:intergenic | 40.0% | |
| AATTGTGGGGTTGTACTCGA+GGG | - | chr2_4:7072356-7072375 | None:intergenic | 45.0% | |
| TAATTGTGGGGTTGTACTCG+AGG | - | chr2_4:7072357-7072376 | None:intergenic | 45.0% | |
| ! | TAGTGGTGGGGAGGATTTAA+AGG | - | chr2_4:7072393-7072412 | None:intergenic | 45.0% |
| TGTAAAAGGAGGGAAGGAAC+GGG | - | chr2_4:7072463-7072482 | None:intergenic | 45.0% | |
| AGAGAAATCCTCCACATCCA+AGG | + | chr2_4:7072533-7072552 | Msa0312080:CDS | 45.0% | |
| ! | GAAGTAATTTGCGACGAGCA+CGG | + | chr2_4:7072593-7072612 | Msa0312080:CDS | 45.0% |
| ! | GGAATCGCCGTTGTATTTTC+CGG | - | chr2_4:7072630-7072649 | None:intergenic | 45.0% |
| GGATCTTGAACCTGGTACTA+TGG | + | chr2_4:7072727-7072746 | Msa0312080:CDS | 45.0% | |
| CTAACGGAATCCATAGTACC+AGG | - | chr2_4:7072740-7072759 | None:intergenic | 45.0% | |
| AAAGATCTGACCAAACGGAC+CGG | - | chr2_4:7072765-7072784 | None:intergenic | 45.0% | |
| GGACGAAAGATCTGACCAAA+CGG | - | chr2_4:7072770-7072789 | None:intergenic | 45.0% | |
| GTTTGGTCAGATCTTTCGTC+CGG | + | chr2_4:7072769-7072788 | Msa0312080:CDS | 45.0% | |
| ! | AGTCTGGTGCTGGGAATAAT+TGG | + | chr2_4:7072810-7072829 | Msa0312080:CDS | 45.0% |
| ! | GTCTGGTGCTGGGAATAATT+GGG | + | chr2_4:7072811-7072830 | Msa0312080:CDS | 45.0% |
| GCCAAAGGTCATTATACCGA+AGG | + | chr2_4:7072833-7072852 | Msa0312080:CDS | 45.0% | |
| GCCTTCGGTATAATGACCTT+TGG | - | chr2_4:7072837-7072856 | None:intergenic | 45.0% | |
| ATCAATAAGCTCAGCGCCTT+CGG | - | chr2_4:7072852-7072871 | None:intergenic | 45.0% | |
| ! | CAAGTGTGTCATTCATTGGG+AGG | + | chr2_4:7073465-7073484 | Msa0312080:intron | 45.0% |
| GCAGAAACAGCTGAAGAGAA+TGG | + | chr2_4:7073626-7073645 | Msa0312080:intron | 45.0% | |
| ! | TCAAGCATCCAAAGAGCACA+AGG | + | chr2_4:7073659-7073678 | Msa0312080:intron | 45.0% |
| GAAGTCGAGGTTGTCATCTT+GGG | - | chr2_4:7073845-7073864 | None:intergenic | 45.0% | |
| AGAAGTCGAGGTTGTCATCT+TGG | - | chr2_4:7073846-7073865 | None:intergenic | 45.0% | |
| GATGACAACCTCGACTTCTA+AGG | + | chr2_4:7073847-7073866 | Msa0312080:CDS | 45.0% | |
| AATTGTGGGGTTGTACTCGA+GGG | - | chr2_4:7072356-7072375 | None:intergenic | 45.0% | |
| TAATTGTGGGGTTGTACTCG+AGG | - | chr2_4:7072357-7072376 | None:intergenic | 45.0% | |
| ! | TAGTGGTGGGGAGGATTTAA+AGG | - | chr2_4:7072393-7072412 | None:intergenic | 45.0% |
| TGTAAAAGGAGGGAAGGAAC+GGG | - | chr2_4:7072463-7072482 | None:intergenic | 45.0% | |
| AGAGAAATCCTCCACATCCA+AGG | + | chr2_4:7072533-7072552 | Msa0312080:CDS | 45.0% | |
| ! | GAAGTAATTTGCGACGAGCA+CGG | + | chr2_4:7072593-7072612 | Msa0312080:CDS | 45.0% |
| ! | GGAATCGCCGTTGTATTTTC+CGG | - | chr2_4:7072630-7072649 | None:intergenic | 45.0% |
| GGATCTTGAACCTGGTACTA+TGG | + | chr2_4:7072727-7072746 | Msa0312080:CDS | 45.0% | |
| CTAACGGAATCCATAGTACC+AGG | - | chr2_4:7072740-7072759 | None:intergenic | 45.0% | |
| AAAGATCTGACCAAACGGAC+CGG | - | chr2_4:7072765-7072784 | None:intergenic | 45.0% | |
| GGACGAAAGATCTGACCAAA+CGG | - | chr2_4:7072770-7072789 | None:intergenic | 45.0% | |
| GTTTGGTCAGATCTTTCGTC+CGG | + | chr2_4:7072769-7072788 | Msa0312080:CDS | 45.0% | |
| ! | AGTCTGGTGCTGGGAATAAT+TGG | + | chr2_4:7072810-7072829 | Msa0312080:CDS | 45.0% |
| ! | GTCTGGTGCTGGGAATAATT+GGG | + | chr2_4:7072811-7072830 | Msa0312080:CDS | 45.0% |
| GCCAAAGGTCATTATACCGA+AGG | + | chr2_4:7072833-7072852 | Msa0312080:CDS | 45.0% | |
| GCCTTCGGTATAATGACCTT+TGG | - | chr2_4:7072837-7072856 | None:intergenic | 45.0% | |
| ATCAATAAGCTCAGCGCCTT+CGG | - | chr2_4:7072852-7072871 | None:intergenic | 45.0% | |
| ! | CAAGTGTGTCATTCATTGGG+AGG | + | chr2_4:7073465-7073484 | Msa0312080:intron | 45.0% |
| GCAGAAACAGCTGAAGAGAA+TGG | + | chr2_4:7073626-7073645 | Msa0312080:intron | 45.0% | |
| ! | TCAAGCATCCAAAGAGCACA+AGG | + | chr2_4:7073659-7073678 | Msa0312080:intron | 45.0% |
| GAAGTCGAGGTTGTCATCTT+GGG | - | chr2_4:7073845-7073864 | None:intergenic | 45.0% | |
| AGAAGTCGAGGTTGTCATCT+TGG | - | chr2_4:7073846-7073865 | None:intergenic | 45.0% | |
| GATGACAACCTCGACTTCTA+AGG | + | chr2_4:7073847-7073866 | Msa0312080:CDS | 45.0% | |
| GTGGGGAGGATTTAAAGGAG+GGG | - | chr2_4:7072388-7072407 | None:intergenic | 50.0% | |
| GGTGGGGAGGATTTAAAGGA+GGG | - | chr2_4:7072389-7072408 | None:intergenic | 50.0% | |
| TGGTGGGGAGGATTTAAAGG+AGG | - | chr2_4:7072390-7072409 | None:intergenic | 50.0% | |
| ! | AATGGAAGGGGGTTAGTGGT+GGG | - | chr2_4:7072406-7072425 | None:intergenic | 50.0% |
| ! | AAATGGAAGGGGGTTAGTGG+TGG | - | chr2_4:7072407-7072426 | None:intergenic | 50.0% |
| GAAATCCTCCACATCCAAGG+CGG | + | chr2_4:7072536-7072555 | Msa0312080:CDS | 50.0% | |
| GGACAATGCGGGAACCAAAT+CGG | + | chr2_4:7072557-7072576 | Msa0312080:CDS | 50.0% | |
| ACCAAATCGGCGCCAAATTC+TGG | + | chr2_4:7072570-7072589 | Msa0312080:CDS | 50.0% | |
| CCAAATCGGCGCCAAATTCT+GGG | + | chr2_4:7072571-7072590 | Msa0312080:CDS | 50.0% | |
| GAGCACGGAATTGATCACAC+CGG | + | chr2_4:7072608-7072627 | Msa0312080:CDS | 50.0% | |
| ! | ACAATGAAGCCAGTGGTGGA+AGG | + | chr2_4:7072681-7072700 | Msa0312080:CDS | 50.0% |
| AGATCCATAAGAACAGCGCG+TGG | - | chr2_4:7072713-7072732 | None:intergenic | 50.0% | |
| ACCAAACGGACCGGATCTAA+CGG | - | chr2_4:7072756-7072775 | None:intergenic | 50.0% | |
| TATTCGGTCAGTCTGGTGCT+GGG | + | chr2_4:7072801-7072820 | Msa0312080:CDS | 50.0% | |
| GCTGGGAATAATTGGGCCAA+AGG | + | chr2_4:7072818-7072837 | Msa0312080:CDS | 50.0% | |
| ! | TGGTTCTGCCTTGTGCTCTT+TGG | - | chr2_4:7073670-7073689 | None:intergenic | 50.0% |
| ! | AAGTCGATTCTCCAACACCC+CGG | + | chr2_4:7073694-7073713 | Msa0312080:intron | 50.0% |
| GTGGGGAGGATTTAAAGGAG+GGG | - | chr2_4:7072388-7072407 | None:intergenic | 50.0% | |
| GGTGGGGAGGATTTAAAGGA+GGG | - | chr2_4:7072389-7072408 | None:intergenic | 50.0% | |
| TGGTGGGGAGGATTTAAAGG+AGG | - | chr2_4:7072390-7072409 | None:intergenic | 50.0% | |
| ! | AATGGAAGGGGGTTAGTGGT+GGG | - | chr2_4:7072406-7072425 | None:intergenic | 50.0% |
| ! | AAATGGAAGGGGGTTAGTGG+TGG | - | chr2_4:7072407-7072426 | None:intergenic | 50.0% |
| GAAATCCTCCACATCCAAGG+CGG | + | chr2_4:7072536-7072555 | Msa0312080:CDS | 50.0% | |
| GGACAATGCGGGAACCAAAT+CGG | + | chr2_4:7072557-7072576 | Msa0312080:CDS | 50.0% | |
| ACCAAATCGGCGCCAAATTC+TGG | + | chr2_4:7072570-7072589 | Msa0312080:CDS | 50.0% | |
| CCAAATCGGCGCCAAATTCT+GGG | + | chr2_4:7072571-7072590 | Msa0312080:CDS | 50.0% | |
| GAGCACGGAATTGATCACAC+CGG | + | chr2_4:7072608-7072627 | Msa0312080:CDS | 50.0% | |
| ! | ACAATGAAGCCAGTGGTGGA+AGG | + | chr2_4:7072681-7072700 | Msa0312080:CDS | 50.0% |
| AGATCCATAAGAACAGCGCG+TGG | - | chr2_4:7072713-7072732 | None:intergenic | 50.0% | |
| ACCAAACGGACCGGATCTAA+CGG | - | chr2_4:7072756-7072775 | None:intergenic | 50.0% | |
| TATTCGGTCAGTCTGGTGCT+GGG | + | chr2_4:7072801-7072820 | Msa0312080:CDS | 50.0% | |
| GCTGGGAATAATTGGGCCAA+AGG | + | chr2_4:7072818-7072837 | Msa0312080:CDS | 50.0% | |
| ! | TGGTTCTGCCTTGTGCTCTT+TGG | - | chr2_4:7073670-7073689 | None:intergenic | 50.0% |
| ! | AAGTCGATTCTCCAACACCC+CGG | + | chr2_4:7073694-7073713 | Msa0312080:intron | 50.0% |
| ! | ATGGAAGGGGGTTAGTGGTG+GGG | - | chr2_4:7072405-7072424 | None:intergenic | 55.0% |
| AAAAGGAGGGAAGGAACGGG+TGG | - | chr2_4:7072460-7072479 | None:intergenic | 55.0% | |
| ATTGTCCGCCTTGGATGTGG+AGG | - | chr2_4:7072544-7072563 | None:intergenic | 55.0% | |
| CACATCCAAGGCGGACAATG+CGG | + | chr2_4:7072545-7072564 | Msa0312080:CDS | 55.0% | |
| ACATCCAAGGCGGACAATGC+GGG | + | chr2_4:7072546-7072565 | Msa0312080:CDS | 55.0% | |
| !! | CCCAGAATTTGGCGCCGATT+TGG | - | chr2_4:7072574-7072593 | None:intergenic | 55.0% |
| TGGAACGTACCTTCCACCAC+TGG | - | chr2_4:7072693-7072712 | None:intergenic | 55.0% | |
| CGTTCCACGCGCTGTTCTTA+TGG | + | chr2_4:7072706-7072725 | Msa0312080:CDS | 55.0% | |
| TCCGTTAGATCCGGTCCGTT+TGG | + | chr2_4:7072752-7072771 | Msa0312080:CDS | 55.0% | |
| GTATTCGGTCAGTCTGGTGC+TGG | + | chr2_4:7072800-7072819 | Msa0312080:CDS | 55.0% | |
| AGGAGTGAAAGCTGGAACGC+TGG | - | chr2_4:7073726-7073745 | None:intergenic | 55.0% | |
| ! | ATGGAAGGGGGTTAGTGGTG+GGG | - | chr2_4:7072405-7072424 | None:intergenic | 55.0% |
| AAAAGGAGGGAAGGAACGGG+TGG | - | chr2_4:7072460-7072479 | None:intergenic | 55.0% | |
| ATTGTCCGCCTTGGATGTGG+AGG | - | chr2_4:7072544-7072563 | None:intergenic | 55.0% | |
| CACATCCAAGGCGGACAATG+CGG | + | chr2_4:7072545-7072564 | Msa0312080:CDS | 55.0% | |
| ACATCCAAGGCGGACAATGC+GGG | + | chr2_4:7072546-7072565 | Msa0312080:CDS | 55.0% | |
| !! | CCCAGAATTTGGCGCCGATT+TGG | - | chr2_4:7072574-7072593 | None:intergenic | 55.0% |
| TGGAACGTACCTTCCACCAC+TGG | - | chr2_4:7072693-7072712 | None:intergenic | 55.0% | |
| CGTTCCACGCGCTGTTCTTA+TGG | + | chr2_4:7072706-7072725 | Msa0312080:CDS | 55.0% | |
| TCCGTTAGATCCGGTCCGTT+TGG | + | chr2_4:7072752-7072771 | Msa0312080:CDS | 55.0% | |
| GTATTCGGTCAGTCTGGTGC+TGG | + | chr2_4:7072800-7072819 | Msa0312080:CDS | 55.0% | |
| AGGAGTGAAAGCTGGAACGC+TGG | - | chr2_4:7073726-7073745 | None:intergenic | 55.0% | |
| CGCATTGTCCGCCTTGGATG+TGG | - | chr2_4:7072547-7072566 | None:intergenic | 60.0% | |
| TGGAACGCTGGAGAATGCCG+GGG | - | chr2_4:7073714-7073733 | None:intergenic | 60.0% | |
| CTGGAACGCTGGAGAATGCC+GGG | - | chr2_4:7073715-7073734 | None:intergenic | 60.0% | |
| GCTGGAACGCTGGAGAATGC+CGG | - | chr2_4:7073716-7073735 | None:intergenic | 60.0% | |
| CGCATTGTCCGCCTTGGATG+TGG | - | chr2_4:7072547-7072566 | None:intergenic | 60.0% | |
| TGGAACGCTGGAGAATGCCG+GGG | - | chr2_4:7073714-7073733 | None:intergenic | 60.0% | |
| CTGGAACGCTGGAGAATGCC+GGG | - | chr2_4:7073715-7073734 | None:intergenic | 60.0% | |
| GCTGGAACGCTGGAGAATGC+CGG | - | chr2_4:7073716-7073735 | None:intergenic | 60.0% | |
| ! | GAAGGGGGTTAGTGGTGGGG+AGG | - | chr2_4:7072402-7072421 | None:intergenic | 65.0% |
| GGTTCCCGCATTGTCCGCCT+TGG | - | chr2_4:7072553-7072572 | None:intergenic | 65.0% | |
| GCTGGAGAATGCCGGGGTGT+TGG | - | chr2_4:7073708-7073727 | None:intergenic | 65.0% | |
| ! | GAAGGGGGTTAGTGGTGGGG+AGG | - | chr2_4:7072402-7072421 | None:intergenic | 65.0% |
| GGTTCCCGCATTGTCCGCCT+TGG | - | chr2_4:7072553-7072572 | None:intergenic | 65.0% | |
| GCTGGAGAATGCCGGGGTGT+TGG | - | chr2_4:7073708-7073727 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 7072332 | 7073970 | 7072332 | ID=Msa0312080;Name=Msa0312080 |
| chr2_4 | mRNA | 7072332 | 7073970 | 7072332 | ID=Msa0312080-mRNA-1;Parent=Msa0312080;Name=Msa0312080-mRNA-1;_AED=0.17;_eAED=0.17;_QI=198|0|0.5|0.5|1|1|2|0|209 |
| chr2_4 | exon | 7072332 | 7072923 | 7072332 | ID=Msa0312080-mRNA-1:exon:2702;Parent=Msa0312080-mRNA-1 |
| chr2_4 | exon | 7073735 | 7073970 | 7073735 | ID=Msa0312080-mRNA-1:exon:2703;Parent=Msa0312080-mRNA-1 |
| chr2_4 | five_prime_UTR | 7072332 | 7072529 | 7072332 | ID=Msa0312080-mRNA-1:five_prime_utr;Parent=Msa0312080-mRNA-1 |
| chr2_4 | CDS | 7072530 | 7072923 | 7072530 | ID=Msa0312080-mRNA-1:cds;Parent=Msa0312080-mRNA-1 |
| chr2_4 | CDS | 7073735 | 7073970 | 7073735 | ID=Msa0312080-mRNA-1:cds;Parent=Msa0312080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
