Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116270 | sp|F4HWE6|SEC5B_ARATH | 65.238 | 420 | 127 | 5 | 2 | 408 | 4 | 417 | 6.54e-175 | 520 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116270 | A0A072VPI1 | 98.778 | 409 | 3 | 2 | 1 | 408 | 1 | 408 | 0.0 | 827 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035320 | Msa0116270 | 0.832160 | 1.107770e-55 | -8.615850e-47 |
| Msa0047640 | Msa0116270 | 0.818024 | 2.432627e-52 | -8.615850e-47 |
| Msa0054530 | Msa0116270 | 0.814569 | 1.441200e-51 | -8.615850e-47 |
| Msa0064920 | Msa0116270 | 0.833527 | 5.065715e-56 | -8.615850e-47 |
| Msa0089980 | Msa0116270 | 0.814510 | 1.485376e-51 | -8.615850e-47 |
| Msa0090010 | Msa0116270 | 0.809573 | 1.770326e-50 | -8.615850e-47 |
| Msa0090660 | Msa0116270 | 0.812279 | 4.592933e-51 | -8.615850e-47 |
| Msa0091780 | Msa0116270 | 0.804563 | 2.034813e-49 | -8.615850e-47 |
| Msa0116270 | Msa0126230 | 0.818216 | 2.200628e-52 | -8.615850e-47 |
| Msa0116270 | Msa0137540 | 0.818536 | 1.862220e-52 | -8.615850e-47 |
| Msa0116270 | Msa0279390 | 0.823527 | 1.319993e-53 | -8.615850e-47 |
| Msa0116270 | Msa0302880 | 0.803765 | 2.982136e-49 | -8.615850e-47 |
| Msa0116270 | Msa0302890 | 0.831298 | 1.806569e-55 | -8.615850e-47 |
| Msa0116270 | Msa0304100 | 0.802779 | 4.771040e-49 | -8.615850e-47 |
| Msa0116270 | Msa0305330 | 0.813125 | 2.998212e-51 | -8.615850e-47 |
| Msa0116270 | Msa0312080 | 0.804710 | 1.895280e-49 | -8.615850e-47 |
| Msa0116270 | Msa0318880 | 0.815342 | 9.709418e-52 | -8.615850e-47 |
| Msa0116270 | Msa0358400 | 0.802869 | 4.572426e-49 | -8.615850e-47 |
| Msa0116270 | Msa0362890 | 0.806263 | 8.955945e-50 | -8.615850e-47 |
| Msa0116270 | Msa0379610 | 0.801987 | 6.946978e-49 | -8.615850e-47 |
| Msa0116270 | Msa0423840 | 0.837216 | 5.923037e-57 | -8.615850e-47 |
| Msa0116270 | Msa0431410 | 0.803447 | 3.471045e-49 | -8.615850e-47 |
| Msa0116270 | Msa0446900 | 0.800730 | 1.256695e-48 | -8.615850e-47 |
| Msa0116270 | Msa0478230 | 0.826543 | 2.561485e-54 | -8.615850e-47 |
| Msa0116270 | Msa0483740 | 0.806681 | 7.311355e-50 | -8.615850e-47 |
| Msa0116270 | Msa0510290 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0116270 | Msa0544730 | 0.804327 | 2.278336e-49 | -8.615850e-47 |
| Msa0116270 | Msa0547680 | 0.821992 | 3.005838e-53 | -8.615850e-47 |
| Msa0116270 | Msa0606740 | 0.805307 | 1.421830e-49 | -8.615850e-47 |
| Msa0116270 | Msa0626270 | 0.813277 | 2.777199e-51 | -8.615850e-47 |
| Msa0116270 | Msa0648830 | 0.803405 | 3.541189e-49 | -8.615850e-47 |
| Msa0116270 | Msa0687450 | 0.807366 | 5.235319e-50 | -8.615850e-47 |
| Msa0116270 | Msa0689760 | 0.836065 | 1.163833e-56 | -8.615850e-47 |
| Msa0116270 | Msa0691340 | 0.842863 | 1.994534e-58 | -8.615850e-47 |
| Msa0116270 | Msa0716860 | 0.826572 | 2.521064e-54 | -8.615850e-47 |
| Msa0116270 | Msa0749400 | 0.836870 | 7.261319e-57 | -8.615850e-47 |
| Msa0116270 | Msa0760770 | 0.806116 | 9.618044e-50 | -8.615850e-47 |
| Msa0116270 | Msa0905590 | 0.818244 | 2.168823e-52 | -8.615850e-47 |
| Msa0116270 | Msa0937430 | 0.820802 | 5.658067e-53 | -8.615850e-47 |
| Msa0116270 | Msa0969330 | 0.840817 | 6.917857e-58 | -8.615850e-47 |
| Msa0116270 | Msa0969780 | 0.832674 | 8.263181e-56 | -8.615850e-47 |
| Msa0116270 | Msa0996020 | 0.851545 | 8.275724e-61 | -8.615850e-47 |
| Msa0116270 | Msa1051960 | 0.811129 | 8.168376e-51 | -8.615850e-47 |
| Msa0116270 | Msa1072600 | 0.806833 | 6.787696e-50 | -8.615850e-47 |
| Msa0116270 | Msa1095790 | 0.857389 | 1.687403e-62 | -8.615850e-47 |
| Msa0116270 | Msa1211340 | 0.805620 | 1.222279e-49 | -8.615850e-47 |
| Msa0116270 | Msa1217670 | 0.833884 | 4.126507e-56 | -8.615850e-47 |
| Msa0116270 | Msa1254620 | 0.834732 | 2.528964e-56 | -8.615850e-47 |
| Msa0116270 | Msa1268680 | 0.833405 | 5.435580e-56 | -8.615850e-47 |
| Msa0116270 | Msa1336030 | 0.803976 | 2.696123e-49 | -8.615850e-47 |
| Msa0116270 | Msa1342270 | 0.843433 | 1.405708e-58 | -8.615850e-47 |
| Msa0116270 | Msa1353550 | 0.854960 | 8.688829e-62 | -8.615850e-47 |
| Msa0116270 | Msa1366550 | 0.810993 | 8.742020e-51 | -8.615850e-47 |
| Msa0116270 | Msa1372790 | 0.815798 | 7.685378e-52 | -8.615850e-47 |
| Msa0116270 | Msa1377810 | 0.849979 | 2.283968e-60 | -8.615850e-47 |
| Msa0116270 | Msa1393820 | 0.822867 | 1.882021e-53 | -8.615850e-47 |
| Msa0116270 | Msa1409500 | 0.980659 | 9.888771e-151 | -8.615850e-47 |
| Msa0116270 | Msa1420250 | 0.834665 | 2.628646e-56 | -8.615850e-47 |
| Msa0116270 | Msa1426910 | 0.828252 | 9.970561e-55 | -8.615850e-47 |
| Msa0116270 | Msa1435260 | 0.836673 | 8.154756e-57 | -8.615850e-47 |
| Msa0116270 | Msa1464370 | 0.832122 | 1.131861e-55 | -8.615850e-47 |
| Msa0116270 | Msa1467000 | 0.828955 | 6.741437e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116270 | MtrunA17_Chr1g0200641 | 98.778 | 409 | 3 | 2 | 1 | 408 | 1 | 408 | 0.0 | 827 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0116270 | AT1G21170.1 | 65.238 | 420 | 127 | 5 | 2 | 408 | 4 | 417 | 6.65e-176 | 520 |
| Msa0116270 | AT1G21170.2 | 65.238 | 420 | 127 | 5 | 2 | 408 | 4 | 417 | 1.15e-175 | 520 |
| Msa0116270 | AT1G76850.1 | 65.258 | 426 | 122 | 7 | 1 | 408 | 1 | 418 | 4.37e-171 | 507 |
Find 112 sgRNAs with CRISPR-Local
Find 411 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTCTGCATTGGCTAAAA+AGG | 0.206585 | 1_3:-35146549 | Msa0116270:CDS |
| CCTCTTCAAGAACACGTTTC+AGG | 0.240737 | 1_3:+35144117 | None:intergenic |
| CCCACCTGGCGTTCGAATAA+AGG | 0.262738 | 1_3:+35144666 | None:intergenic |
| GCTTCTCCAGATGGCGTTAA+AGG | 0.264551 | 1_3:-35149478 | Msa0116270:CDS |
| ACAACTCTCCCTTTCGTTTG+AGG | 0.340372 | 1_3:+35149333 | None:intergenic |
| TGGGAAGTCCCAGACCCTTC+AGG | 0.349609 | 1_3:+35144741 | None:intergenic |
| CGAGGGAGGAGGATCGGACT+TGG | 0.367427 | 1_3:-35149197 | Msa0116270:CDS |
| GAGGATGACCCTGAAGGGTC+TGG | 0.381558 | 1_3:-35144750 | Msa0116270:CDS |
| GTGAATATGATTTGGCTGTC+AGG | 0.383310 | 1_3:-35144459 | Msa0116270:CDS |
| CTTGAATAATATTAAACAAA+TGG | 0.384359 | 1_3:+35144721 | None:intergenic |
| TCAGCATCCTTGTCAGTCTT+AGG | 0.388138 | 1_3:+35146275 | None:intergenic |
| TAGCAAGGGTGAATATGATT+TGG | 0.391838 | 1_3:-35144467 | Msa0116270:CDS |
| ATTGCTCCTTTAACGCCATC+TGG | 0.396626 | 1_3:+35149472 | None:intergenic |
| TGTGTTGATCCACTAGGTTT+GGG | 0.397098 | 1_3:-35146485 | Msa0116270:CDS |
| GCAGAGAAAGCAGTTGGTTA+AGG | 0.397647 | 1_3:-35145049 | Msa0116270:CDS |
| GCCGGAGGCGCTGAGCGTTT+CGG | 0.405968 | 1_3:+35149366 | None:intergenic |
| ATGTGTTGATCCACTAGGTT+TGG | 0.412170 | 1_3:-35146486 | Msa0116270:CDS |
| CATTTGTTTAATATTATTCA+AGG | 0.415540 | 1_3:-35144720 | Msa0116270:CDS |
| ACATTTGTTATATCTATGTT+CGG | 0.429094 | 1_3:+35144041 | None:intergenic |
| TGACCTGGAGGCTGGTGCGC+TGG | 0.431040 | 1_3:-35145103 | Msa0116270:CDS |
| CCCTTTCGTTTGAGGTTTCG+CGG | 0.434697 | 1_3:+35149341 | None:intergenic |
| GTTTGAGGTTTCGCGGTGGC+CGG | 0.435052 | 1_3:+35149348 | None:intergenic |
| TTGAATAATATTAAACAAAT+GGG | 0.441605 | 1_3:+35144722 | None:intergenic |
| CCGGTGAATGTGAACGGAAT+GGG | 0.450523 | 1_3:+35149550 | None:intergenic |
| ACCGAAACGCTCAGCGCCTC+CGG | 0.459974 | 1_3:-35149367 | Msa0116270:CDS |
| GCGTTCGAATAAAGGCTTCA+AGG | 0.466972 | 1_3:+35144674 | None:intergenic |
| TCTTTGACAGCTTGCTCGTA+GGG | 0.470249 | 1_3:-35146642 | Msa0116270:intron |
| TGAGGATAATGTTAAAGATC+AGG | 0.473475 | 1_3:-35149259 | Msa0116270:CDS |
| GGGAAGTCCCAGACCCTTCA+GGG | 0.475703 | 1_3:+35144742 | None:intergenic |
| CCCATTCCGTTCACATTCAC+CGG | 0.477098 | 1_3:-35149550 | Msa0116270:five_prime_UTR |
| TAATACAAGTGCTGCTGACC+TGG | 0.477555 | 1_3:-35145118 | Msa0116270:CDS |
| CTCCGGCGAGGGAGGAGGAT+CGG | 0.483522 | 1_3:-35149203 | Msa0116270:CDS |
| TGGAAGAACTCCGGCGAGGG+AGG | 0.484878 | 1_3:-35149211 | Msa0116270:CDS |
| AGGATGACCCTGAAGGGTCT+GGG | 0.487794 | 1_3:-35144749 | Msa0116270:CDS |
| CTCGTAGGGTTCGTGAAATG+AGG | 0.487800 | 1_3:-35146628 | Msa0116270:CDS |
| AGTGCTGCTGACCTGGAGGC+TGG | 0.492005 | 1_3:-35145111 | Msa0116270:CDS |
| GTCAAAGTTAAGACGAATTG+AGG | 0.495174 | 1_3:-35144769 | Msa0116270:CDS |
| ATGCAAAATTGTTCTTATCA+CGG | 0.498458 | 1_3:-35145149 | Msa0116270:CDS |
| AAGCCAGCGCACCAGCCTCC+AGG | 0.501540 | 1_3:+35145100 | None:intergenic |
| GTCCGATCCTCCTCCCTCGC+CGG | 0.505168 | 1_3:+35149201 | None:intergenic |
| AAGAACTCCGGCGAGGGAGG+AGG | 0.509737 | 1_3:-35149208 | Msa0116270:CDS |
| ATGCTGCCACGGATAGTACT+TGG | 0.513356 | 1_3:+35144490 | None:intergenic |
| GAAACTCGTCACTGCTTCGC+CGG | 0.516299 | 1_3:+35149531 | None:intergenic |
| TTCTTTGACAGCTTGCTCGT+AGG | 0.517337 | 1_3:-35146643 | Msa0116270:intron |
| GAACATTCTTTCTTCCTCCC+CGG | 0.522760 | 1_3:-35149636 | Msa0116270:five_prime_UTR |
| CCTGAAACGTGTTCTTGAAG+AGG | 0.525268 | 1_3:-35144117 | Msa0116270:CDS |
| GGAACCTCTGTAGCATCCCT+TGG | 0.525564 | 1_3:+35144530 | None:intergenic |
| GAGTGGAAGAACTCCGGCGA+GGG | 0.526418 | 1_3:-35149214 | Msa0116270:CDS |
| GAGGAAGAAAGAATGTTCAA+TGG | 0.531113 | 1_3:+35149641 | None:intergenic |
| GCCGGTGAATGTGAACGGAA+TGG | 0.534429 | 1_3:+35149549 | None:intergenic |
| TGAGGTTTCGCGGTGGCCGG+AGG | 0.536535 | 1_3:+35149351 | None:intergenic |
| CACCCTTGCTAATGCTGCCA+CGG | 0.538730 | 1_3:+35144479 | None:intergenic |
| GAGGGAGGAGGATCGGACTT+GGG | 0.538835 | 1_3:-35149196 | Msa0116270:CDS |
| CCGCGAAACCTCAAACGAAA+GGG | 0.540947 | 1_3:-35149341 | Msa0116270:CDS |
| GAGGAGGATCGGACTTGGGA+TGG | 0.549780 | 1_3:-35149192 | Msa0116270:CDS |
| GAAGCCTTTATTCGAACGCC+AGG | 0.558193 | 1_3:-35144670 | Msa0116270:intron |
| TGAATATGATTTGGCTGTCA+GGG | 0.558997 | 1_3:-35144458 | Msa0116270:CDS |
| GGCTGTCAGGGAGTACAAGA+AGG | 0.563980 | 1_3:-35144446 | Msa0116270:CDS |
| GGTTGAACGTAGTTAGCGAC+GGG | 0.564760 | 1_3:+35149402 | None:intergenic |
| TCGTCGAAGAATCGAGGGAG+TGG | 0.566173 | 1_3:-35149231 | Msa0116270:CDS |
| ACCGCGAAACCTCAAACGAA+AGG | 0.566816 | 1_3:-35149342 | Msa0116270:CDS |
| TATCCGTGGCAGCATTAGCA+AGG | 0.572993 | 1_3:-35144482 | Msa0116270:CDS |
| ACAGTCATTCCCTCGTGGCA+TGG | 0.576315 | 1_3:-35146510 | Msa0116270:CDS |
| TAGTATTTCTAGCGGTGATG+AGG | 0.576767 | 1_3:-35149277 | Msa0116270:CDS |
| TATTCAAGGAGTTAGTTCGC+AGG | 0.578647 | 1_3:-35144706 | Msa0116270:CDS |
| TGAAGACGAGCTTCTCCAGA+TGG | 0.579001 | 1_3:-35149487 | Msa0116270:CDS |
| GAGCGTTTCGGTTGAGACGA+CGG | 0.579201 | 1_3:+35149378 | None:intergenic |
| CAGTAGGTTTATACATGAGA+GGG | 0.581536 | 1_3:+35144406 | None:intergenic |
| TACTGAGCAGAGAAAGCAGT+TGG | 0.581539 | 1_3:-35145055 | Msa0116270:CDS |
| CGAATTGAGGATGACCCTGA+AGG | 0.581739 | 1_3:-35144756 | Msa0116270:CDS |
| GGATCGGACTTGGGATGGTG+AGG | 0.584375 | 1_3:-35149187 | Msa0116270:CDS |
| AACGGAATGGGATAGAGAAG+AGG | 0.588027 | 1_3:+35149562 | None:intergenic |
| AGGAGAACTGTCTGAAGACT+CGG | 0.593578 | 1_3:+35146295 | None:intergenic |
| TTGGTAGGTTGAAAAGTGTA+CGG | 0.593735 | 1_3:+35144509 | None:intergenic |
| AATACTAAGCATCTCCACTT+CGG | 0.599165 | 1_3:+35149293 | None:intergenic |
| GGAAACAAGGACGGCACCTG+TGG | 0.601069 | 1_3:-35146606 | Msa0116270:CDS |
| CTGTCCAAGGGATGCTACAG+AGG | 0.607097 | 1_3:-35144534 | Msa0116270:CDS |
| ACAGTAGGTTTATACATGAG+AGG | 0.607437 | 1_3:+35144405 | None:intergenic |
| AGAGGGAAGAGCAATTGACT+TGG | 0.611105 | 1_3:+35144423 | None:intergenic |
| CAAGTCCATACCGTCGATTG+TGG | 0.611201 | 1_3:+35144996 | None:intergenic |
| TCGTAGGGTTCGTGAAATGA+GGG | 0.612594 | 1_3:-35146627 | Msa0116270:CDS |
| GAACTTTACCCCAAACCTAG+TGG | 0.615864 | 1_3:+35146476 | None:intergenic |
| ACGAGGGAATGACTGTAAGT+AGG | 0.616245 | 1_3:+35146517 | None:intergenic |
| GTTACATCGTCGAAGAATCG+AGG | 0.616508 | 1_3:-35149237 | Msa0116270:CDS |
| TCGAGGGAGTGGAAGAACTC+CGG | 0.618008 | 1_3:-35149220 | Msa0116270:CDS |
| GAATTGAGGATGACCCTGAA+GGG | 0.619638 | 1_3:-35144755 | Msa0116270:CDS |
| GTGTTGATCCACTAGGTTTG+GGG | 0.623025 | 1_3:-35146484 | Msa0116270:intron |
| TTCGTGAAATGAGGGAAACA+AGG | 0.623993 | 1_3:-35146619 | Msa0116270:CDS |
| ATGGTGAGGAGCCTAGTCGT+TGG | 0.625615 | 1_3:-35149173 | Msa0116270:CDS |
| CGGTTGAACGTAGTTAGCGA+CGG | 0.626399 | 1_3:+35149401 | None:intergenic |
| CAGTTCTCCTAAGACTGACA+AGG | 0.628505 | 1_3:-35146282 | Msa0116270:CDS |
| TCACAACGAGATCTCAACTA+CGG | 0.630699 | 1_3:-35149450 | Msa0116270:CDS |
| GCTTCGCCGGTGAATGTGAA+CGG | 0.632942 | 1_3:+35149544 | None:intergenic |
| TCAACATGCTTCCAACGACT+AGG | 0.633271 | 1_3:+35149162 | None:intergenic |
| TGAAATGAGGGAAACAAGGA+CGG | 0.634069 | 1_3:-35146615 | Msa0116270:CDS |
| TGATGACGATGATTCCGAAG+TGG | 0.634924 | 1_3:-35149307 | Msa0116270:CDS |
| GTATTTCTTTAGATTCAGGT+AGG | 0.638317 | 1_3:-35144143 | Msa0116270:intron |
| TTACATCGTCGAAGAATCGA+GGG | 0.640120 | 1_3:-35149236 | Msa0116270:CDS |
| ATCCGTGGCAGCATTAGCAA+GGG | 0.649080 | 1_3:-35144481 | Msa0116270:CDS |
| ATGGAATGTGTTGATCCACT+AGG | 0.649820 | 1_3:-35146491 | Msa0116270:CDS |
| TCTTGTAAAACCACAATCGA+CGG | 0.650818 | 1_3:-35145006 | Msa0116270:intron |
| AACCTACCAAGTACTATCCG+TGG | 0.673497 | 1_3:-35144496 | Msa0116270:CDS |
| TACAAGTGCTGCTGACCTGG+AGG | 0.675876 | 1_3:-35145115 | Msa0116270:CDS |
| GAAGCATGTTGATGAAGCTG+AGG | 0.682725 | 1_3:-35149151 | Msa0116270:intron |
| GAGATGCTTAGTATTTCTAG+CGG | 0.697331 | 1_3:-35149285 | Msa0116270:CDS |
| CGTTTCGGTTGAGACGACGG+CGG | 0.702993 | 1_3:+35149381 | None:intergenic |
| TACTTACAGTCATTCCCTCG+TGG | 0.703042 | 1_3:-35146515 | Msa0116270:CDS |
| TCAACACATTCCATGCCACG+AGG | 0.705544 | 1_3:+35146500 | None:intergenic |
| TGCCACGGATAGTACTTGGT+AGG | 0.711375 | 1_3:+35144494 | None:intergenic |
| GGAGTGGAAGAACTCCGGCG+AGG | 0.715263 | 1_3:-35149215 | Msa0116270:CDS |
| CAACACATTCCATGCCACGA+GGG | 0.730428 | 1_3:+35146501 | None:intergenic |
| TTTCGTTTGAGGTTTCGCGG+TGG | 0.749694 | 1_3:+35149344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAACAATGATAA+AGG | + | chr1_3:35148414-35148433 | None:intergenic | 10.0% |
| !! | TTGAATAATATTAAACAAAT+GGG | + | chr1_3:35148975-35148994 | None:intergenic | 10.0% |
| !! | AATATAAGATTAGATTGATT+TGG | + | chr1_3:35145615-35145634 | None:intergenic | 15.0% |
| !! | ATGCAATAATAATATAGTTT+CGG | - | chr1_3:35147620-35147639 | Msa0116270:intron | 15.0% |
| !!! | GATGTTTAATTATTTGAAAT+CGG | - | chr1_3:35147913-35147932 | Msa0116270:intron | 15.0% |
| !! | CTTGAATAATATTAAACAAA+TGG | + | chr1_3:35148976-35148995 | None:intergenic | 15.0% |
| !! | CATTTGTTTAATATTATTCA+AGG | - | chr1_3:35148974-35148993 | Msa0116270:intron | 15.0% |
| !!! | ATGTTTTTTTCTTTTTCTTC+CGG | + | chr1_3:35144080-35144099 | None:intergenic | 20.0% |
| !! | GAAGAAAACAAATAGAATAA+GGG | + | chr1_3:35144620-35144639 | None:intergenic | 20.0% |
| !! | ATGTATATATTACTCAGTTT+GGG | - | chr1_3:35144689-35144708 | Msa0116270:CDS | 20.0% |
| !!! | AAATATCTTTTAGAACCATT+TGG | - | chr1_3:35145260-35145279 | Msa0116270:intron | 20.0% |
| !! | TATAGAAACATAATAAAGTC+TGG | + | chr1_3:35145302-35145321 | None:intergenic | 20.0% |
| !! | TCTATATTTGTTTCCTTTAT+TGG | - | chr1_3:35145316-35145335 | Msa0116270:intron | 20.0% |
| !! | TACTAATGTTAATCCAATAA+AGG | + | chr1_3:35145332-35145351 | None:intergenic | 20.0% |
| !!! | TGCTAATTGATTTTTAATCT+TGG | - | chr1_3:35145768-35145787 | Msa0116270:intron | 20.0% |
| !! | ACAATGAGTTATTATTTGAA+TGG | + | chr1_3:35146002-35146021 | None:intergenic | 20.0% |
| !!! | TTAATAGTACTTGTTGAATT+GGG | + | chr1_3:35146181-35146200 | None:intergenic | 20.0% |
| !!! | ATTAATAGTACTTGTTGAAT+TGG | + | chr1_3:35146182-35146201 | None:intergenic | 20.0% |
| !!! | TCATATTTCTGCAATATATT+TGG | - | chr1_3:35146346-35146365 | Msa0116270:intron | 20.0% |
| !! | TAATATGCGTAATATTCTAA+CGG | + | chr1_3:35146986-35147005 | None:intergenic | 20.0% |
| !!! | TCTGTTTAATTTAATGTAGT+TGG | - | chr1_3:35147026-35147045 | Msa0116270:intron | 20.0% |
| !!! | CTGTTTAATTTAATGTAGTT+GGG | - | chr1_3:35147027-35147046 | Msa0116270:intron | 20.0% |
| !!! | GAACTTTTTCTTTCAAATTT+TGG | + | chr1_3:35147131-35147150 | None:intergenic | 20.0% |
| !!! | TTTTAAAGTCAGTTTCTTTA+TGG | - | chr1_3:35147498-35147517 | Msa0116270:intron | 20.0% |
| !! | ACTTAATTTCACAAATACTA+AGG | + | chr1_3:35147770-35147789 | None:intergenic | 20.0% |
| !!! | AATAGAGTCTTTTTCTAAAT+AGG | - | chr1_3:35147891-35147910 | Msa0116270:intron | 20.0% |
| !! | AATAAAAAATATGACGACTA+GGG | - | chr1_3:35148026-35148045 | Msa0116270:intron | 20.0% |
| !! | GGGTTATTTAAATCTATTAA+TGG | + | chr1_3:35148227-35148246 | None:intergenic | 20.0% |
| !! | TGAAATTGTAATTAAGGAAA+GGG | + | chr1_3:35148248-35148267 | None:intergenic | 20.0% |
| !! | ATGAAATTGTAATTAAGGAA+AGG | + | chr1_3:35148249-35148268 | None:intergenic | 20.0% |
| !! | TTTCCTTAATTACAATTTCA+TGG | - | chr1_3:35148248-35148267 | Msa0116270:intron | 20.0% |
| !! | TTCCTTAATTACAATTTCAT+GGG | - | chr1_3:35148249-35148268 | Msa0116270:intron | 20.0% |
| !! | TATTATTATTTAAGCTCTTC+TGG | - | chr1_3:35148424-35148443 | Msa0116270:intron | 20.0% |
| !!! | AGAGAAATTGCTTTATTTTT+CGG | - | chr1_3:35148513-35148532 | Msa0116270:intron | 20.0% |
| !! | TTAAAACATGTTTATCTTAG+AGG | - | chr1_3:35149352-35149371 | Msa0116270:CDS | 20.0% |
| !! | ATTCCATTTAAGCATATATT+AGG | - | chr1_3:35149444-35149463 | Msa0116270:CDS | 20.0% |
| !! | TTCCATTTAAGCATATATTA+GGG | - | chr1_3:35149445-35149464 | Msa0116270:CDS | 20.0% |
| !!! | TGTTTTTTTCTTTTTCTTCC+GGG | + | chr1_3:35144079-35144098 | None:intergenic | 25.0% |
| ! | CGAAGAAAACAAATAGAATA+AGG | + | chr1_3:35144621-35144640 | None:intergenic | 25.0% |
| ! | CATGTATATATTACTCAGTT+TGG | - | chr1_3:35144688-35144707 | Msa0116270:CDS | 25.0% |
| ! | ATAGCAAAACAAACAACATT+TGG | + | chr1_3:35145040-35145059 | None:intergenic | 25.0% |
| ! | AACAAATGAGCTTAAAGTTT+AGG | - | chr1_3:35145191-35145210 | Msa0116270:intron | 25.0% |
| !! | TTATAGCATCATCTTTTAGA+AGG | - | chr1_3:35145499-35145518 | Msa0116270:intron | 25.0% |
| ! | CTAATTCTCAGTATAAATGA+TGG | - | chr1_3:35145566-35145585 | Msa0116270:intron | 25.0% |
| !!! | ATGGATAGTGCTTTTAATTT+AGG | - | chr1_3:35145585-35145604 | Msa0116270:intron | 25.0% |
| ! | CTATTGAAATTATAGGGTTT+GGG | + | chr1_3:35145666-35145685 | None:intergenic | 25.0% |
| ! | TACGTCCTATTGAAATTATA+GGG | + | chr1_3:35145672-35145691 | None:intergenic | 25.0% |
| ! | TTACGTCCTATTGAAATTAT+AGG | + | chr1_3:35145673-35145692 | None:intergenic | 25.0% |
| !!! | GTTTTAGAACTATGACATTA+TGG | + | chr1_3:35145805-35145824 | None:intergenic | 25.0% |
| ! | AATTGAAGAACAGTTAATAG+TGG | - | chr1_3:35145827-35145846 | Msa0116270:intron | 25.0% |
| ! | TGAGTTATTATTTGAATGGA+TGG | + | chr1_3:35145998-35146017 | None:intergenic | 25.0% |
| ! | TATTAATATCCCAATGAACT+TGG | - | chr1_3:35146195-35146214 | Msa0116270:intron | 25.0% |
| ! | ATTAATATCCCAATGAACTT+GGG | - | chr1_3:35146196-35146215 | Msa0116270:intron | 25.0% |
| ! | ATTACCTAATAAGTTCTACA+AGG | - | chr1_3:35146278-35146297 | Msa0116270:CDS | 25.0% |
| ! | GCTCGTAGTATATTAAAAAA+TGG | + | chr1_3:35146425-35146444 | None:intergenic | 25.0% |
| !! | TTCAACATTGACTATGTATA+TGG | + | chr1_3:35146606-35146625 | None:intergenic | 25.0% |
| ! | CTAGTCACTATCTTAAAAAT+TGG | - | chr1_3:35146746-35146765 | Msa0116270:intron | 25.0% |
| !! | TATCAGTGCTTTATTCATAT+TGG | - | chr1_3:35146953-35146972 | Msa0116270:intron | 25.0% |
| ! | ATTAAGAGAAAAAAATGCCT+AGG | - | chr1_3:35147671-35147690 | Msa0116270:intron | 25.0% |
| ! | GTATTTGTGAAATTAAGTGA+AGG | - | chr1_3:35147772-35147791 | Msa0116270:intron | 25.0% |
| ! | TTAGAATGCGAAAAGTTTAT+TGG | - | chr1_3:35147847-35147866 | Msa0116270:intron | 25.0% |
| !! | AAAAAGACTCTATTTTGTAC+AGG | + | chr1_3:35147885-35147904 | None:intergenic | 25.0% |
| ! | GAATAAAAAATATGACGACT+AGG | - | chr1_3:35148025-35148044 | Msa0116270:intron | 25.0% |
| !! | TGTCACTTAAATAAGAGTAT+AGG | - | chr1_3:35148081-35148100 | Msa0116270:intron | 25.0% |
| ! | GAAATTGTAATTAAGGAAAG+GGG | + | chr1_3:35148247-35148266 | None:intergenic | 25.0% |
| ! | ATCCCATGAAATTGTAATTA+AGG | + | chr1_3:35148254-35148273 | None:intergenic | 25.0% |
| !!! | ATGGGATAAGATTTTGTTTA+TGG | - | chr1_3:35148267-35148286 | Msa0116270:intron | 25.0% |
| ! | ACTATTAGTATTTCCTAGAT+TGG | - | chr1_3:35148371-35148390 | Msa0116270:intron | 25.0% |
| ! | ATGCAAAATTGTTCTTATCA+CGG | - | chr1_3:35148545-35148564 | Msa0116270:intron | 25.0% |
| ! | AATAAAAGACTACTTCTGTA+TGG | + | chr1_3:35148754-35148773 | None:intergenic | 25.0% |
| !! | AGAAGTAGTCTTTTATTCTT+GGG | - | chr1_3:35148757-35148776 | Msa0116270:intron | 25.0% |
| ! | AGAGCTTCACATTAAAATAA+AGG | + | chr1_3:35148881-35148900 | None:intergenic | 25.0% |
| !!! | GTGACTTTTTTTCTAGATTT+TGG | - | chr1_3:35149076-35149095 | Msa0116270:intron | 25.0% |
| !! | TGGAATATGTTGTTTATTCA+TGG | - | chr1_3:35149096-35149115 | Msa0116270:intron | 25.0% |
| ! | AATCTTGAGAACAAAAATTC+AGG | + | chr1_3:35149408-35149427 | None:intergenic | 25.0% |
| ! | AAATGGAATCATTCTTGTAT+CGG | + | chr1_3:35149433-35149452 | None:intergenic | 25.0% |
| ! | TACCCTAATATATGCTTAAA+TGG | + | chr1_3:35149450-35149469 | None:intergenic | 25.0% |
| ! | AGTTGTATTTCTTTAGATTC+AGG | - | chr1_3:35149547-35149566 | Msa0116270:five_prime_UTR | 25.0% |
| !!! | GTTTTTTTCTTTTTCTTCCG+GGG | + | chr1_3:35144078-35144097 | None:intergenic | 30.0% |
| TGAGGATAATGTTAAAGATC+AGG | - | chr1_3:35144435-35144454 | Msa0116270:CDS | 30.0% | |
| ! | TGTTGTTATTGCTACTGATT+AGG | - | chr1_3:35144568-35144587 | Msa0116270:intron | 30.0% |
| ! | GTTGTTATTGCTACTGATTA+GGG | - | chr1_3:35144569-35144588 | Msa0116270:intron | 30.0% |
| ATACATATTCAGCAGAGTAT+CGG | + | chr1_3:35144727-35144746 | None:intergenic | 30.0% | |
| ! | CCATTTTCACAAATGATTAC+TGG | + | chr1_3:35144823-35144842 | None:intergenic | 30.0% |
| CCAGTAATCATTTGTGAAAA+TGG | - | chr1_3:35144820-35144839 | Msa0116270:intron | 30.0% | |
| TTGTGAAAATGGCATAATCT+TGG | - | chr1_3:35144831-35144850 | Msa0116270:intron | 30.0% | |
| !! | TGCTATGAATTTTGATCGAT+TGG | - | chr1_3:35145054-35145073 | Msa0116270:CDS | 30.0% |
| AAATGAGCTTAAAGTTTAGG+AGG | - | chr1_3:35145194-35145213 | Msa0116270:intron | 30.0% | |
| !! | TAGTCTTGTTGTATTACGAA+GGG | - | chr1_3:35145353-35145372 | Msa0116270:intron | 30.0% |
| TTTGCAAAAGGCTTATTTCA+TGG | + | chr1_3:35145436-35145455 | None:intergenic | 30.0% | |
| CATTATCTTAGGTTTGCAAA+AGG | + | chr1_3:35145448-35145467 | None:intergenic | 30.0% | |
| CCTATTGAAATTATAGGGTT+TGG | + | chr1_3:35145667-35145686 | None:intergenic | 30.0% | |
| CCAAACCCTATAATTTCAAT+AGG | - | chr1_3:35145664-35145683 | Msa0116270:intron | 30.0% | |
| CAATTAGCATTTCATGCATT+TGG | + | chr1_3:35145757-35145776 | None:intergenic | 30.0% | |
| AACTATGACATTATGGTTAC+TGG | + | chr1_3:35145798-35145817 | None:intergenic | 30.0% | |
| CTAACTCATCCTTAAAAAAC+CGG | + | chr1_3:35146157-35146176 | None:intergenic | 30.0% | |
| ATACTATACTCATCCTAACT+AGG | - | chr1_3:35146248-35146267 | Msa0116270:intron | 30.0% | |
| TACTATACTCATCCTAACTA+GGG | - | chr1_3:35146249-35146268 | Msa0116270:intron | 30.0% | |
| AAAATGGAAAAGAACAAGCA+AGG | + | chr1_3:35146409-35146428 | None:intergenic | 30.0% | |
| TAATGTAGCATATGAAAAGG+GGG | + | chr1_3:35146485-35146504 | None:intergenic | 30.0% | |
| CTAATGTAGCATATGAAAAG+GGG | + | chr1_3:35146486-35146505 | None:intergenic | 30.0% | |
| CCTAATGTAGCATATGAAAA+GGG | + | chr1_3:35146487-35146506 | None:intergenic | 30.0% | |
| TTAGGCATGCTCTTAAAATT+TGG | - | chr1_3:35146502-35146521 | Msa0116270:CDS | 30.0% | |
| ATGCTCTTAAAATTTGGATC+AGG | - | chr1_3:35146508-35146527 | Msa0116270:CDS | 30.0% | |
| AAAGTAGTTCTCAAAATGCT+TGG | + | chr1_3:35146581-35146600 | None:intergenic | 30.0% | |
| ! | TTAAGAGTTCTTTTGCTTGA+AGG | - | chr1_3:35146922-35146941 | Msa0116270:intron | 30.0% |
| TGAAAGAAAAAGTTCTGCAT+TGG | - | chr1_3:35147136-35147155 | Msa0116270:intron | 30.0% | |
| ! | CACATTACTTCAGTTTTCTT+CGG | - | chr1_3:35147302-35147321 | Msa0116270:intron | 30.0% |
| !! | TATTGGTATTGGTATTTGAC+AGG | - | chr1_3:35147345-35147364 | Msa0116270:intron | 30.0% |
| ACAAAAAATAGTTACCACGT+AGG | + | chr1_3:35147451-35147470 | None:intergenic | 30.0% | |
| ! | TTAAGTGAAGGTTCTGTTTT+TGG | - | chr1_3:35147784-35147803 | Msa0116270:intron | 30.0% |
| TTTCAGCAATAAATAATGCC+TGG | + | chr1_3:35148002-35148021 | None:intergenic | 30.0% | |
| GCATTATTTATTGCTGAAAG+TGG | - | chr1_3:35148003-35148022 | Msa0116270:intron | 30.0% | |
| !! | TTTTGTTTATGGTTTCTCTC+TGG | - | chr1_3:35148278-35148297 | Msa0116270:intron | 30.0% |
| AGAGTTCTATTTCAGTGTTT+GGG | - | chr1_3:35148325-35148344 | Msa0116270:intron | 30.0% | |
| ATTTCAGTGTTTGGGAAATT+TGG | - | chr1_3:35148333-35148352 | Msa0116270:intron | 30.0% | |
| TTAGTATTTCCTAGATTGGT+TGG | - | chr1_3:35148375-35148394 | Msa0116270:intron | 30.0% | |
| TCATATCATCATCAACACTT+GGG | + | chr1_3:35148470-35148489 | None:intergenic | 30.0% | |
| TGATGATATGACAGTTTCTT+TGG | - | chr1_3:35148479-35148498 | Msa0116270:intron | 30.0% | |
| ! | CTCAGTACGACTTTTATAAT+CGG | + | chr1_3:35148626-35148645 | None:intergenic | 30.0% |
| ACTTCTGTATGGTTAAACTA+GGG | + | chr1_3:35148743-35148762 | None:intergenic | 30.0% | |
| TACTTCTGTATGGTTAAACT+AGG | + | chr1_3:35148744-35148763 | None:intergenic | 30.0% | |
| ! | CAGAAGTAGTCTTTTATTCT+TGG | - | chr1_3:35148756-35148775 | Msa0116270:intron | 30.0% |
| GCTTCACATTAAAATAAAGG+AGG | + | chr1_3:35148878-35148897 | None:intergenic | 30.0% | |
| AAAAAATTAGGACTGTCCAA+GGG | - | chr1_3:35149148-35149167 | Msa0116270:intron | 30.0% | |
| AAGATCGAAATGAATACAGT+AGG | + | chr1_3:35149307-35149326 | None:intergenic | 30.0% | |
| ATTCATTTCGATCTTTCTGT+AGG | - | chr1_3:35149312-35149331 | Msa0116270:CDS | 30.0% | |
| ATTAGGGTACATAATGTTTG+TGG | - | chr1_3:35149461-35149480 | Msa0116270:CDS | 30.0% | |
| ! | TAATGTTTGTGGATTTTCTC+TGG | - | chr1_3:35149472-35149491 | Msa0116270:CDS | 30.0% |
| GTATTTCTTTAGATTCAGGT+AGG | - | chr1_3:35149551-35149570 | Msa0116270:five_prime_UTR | 30.0% | |
| GAGGAAGAAAGAATGTTCAA+TGG | + | chr1_3:35144056-35144075 | None:intergenic | 35.0% | |
| AATACTAAGCATCTCCACTT+CGG | + | chr1_3:35144404-35144423 | None:intergenic | 35.0% | |
| !! | GAGATGCTTAGTATTTCTAG+CGG | - | chr1_3:35144409-35144428 | Msa0116270:intron | 35.0% |
| ! | AAATGGCATAATCTTGGTGT+CGG | - | chr1_3:35144837-35144856 | Msa0116270:intron | 35.0% |
| TTGAATGTGATCACATGTGT+TGG | - | chr1_3:35144915-35144934 | Msa0116270:intron | 35.0% | |
| GCACAGATACTTCTAATCAA+AGG | + | chr1_3:35144974-35144993 | None:intergenic | 35.0% | |
| ! | CTCATTGGTTGTGCATTATT+CGG | - | chr1_3:35145137-35145156 | Msa0116270:CDS | 35.0% |
| ! | TCATTGGTTGTGCATTATTC+GGG | - | chr1_3:35145138-35145157 | Msa0116270:CDS | 35.0% |
| ! | TCATTTGTTGAAGAGTAACG+AGG | + | chr1_3:35145180-35145199 | None:intergenic | 35.0% |
| ! | TTTAGAACCATTTGGTCCTT+TGG | - | chr1_3:35145268-35145287 | Msa0116270:intron | 35.0% |
| !! | GTAGTCTTGTTGTATTACGA+AGG | - | chr1_3:35145352-35145371 | Msa0116270:intron | 35.0% |
| AAATTGTTACGATGTGACCA+TGG | - | chr1_3:35145396-35145415 | Msa0116270:intron | 35.0% | |
| GTTCATGGCAACATTATCTT+AGG | + | chr1_3:35145459-35145478 | None:intergenic | 35.0% | |
| AAGATGATGCTATAAAGCTC+CGG | + | chr1_3:35145494-35145513 | None:intergenic | 35.0% | |
| ! | TTGTACTGATAACAATCCTG+TGG | - | chr1_3:35146031-35146050 | Msa0116270:intron | 35.0% |
| ! | TGTACTGATAACAATCCTGT+GGG | - | chr1_3:35146032-35146051 | Msa0116270:intron | 35.0% |
| ACTCTTTAACAGTACTCAAC+AGG | + | chr1_3:35146069-35146088 | None:intergenic | 35.0% | |
| ACTGTTAAAGAGTCCCATAT+TGG | - | chr1_3:35146076-35146095 | Msa0116270:intron | 35.0% | |
| GTTAGGATGAGTATAGTATC+AGG | + | chr1_3:35146247-35146266 | None:intergenic | 35.0% | |
| GGTAATATTTCACCCTAGTT+AGG | + | chr1_3:35146264-35146283 | None:intergenic | 35.0% | |
| ! | ACAGCCTTGTAGAACTTATT+AGG | + | chr1_3:35146285-35146304 | None:intergenic | 35.0% |
| AAGCAAGGACAAGAAGAAAA+AGG | + | chr1_3:35146394-35146413 | None:intergenic | 35.0% | |
| TAATATACTACGAGCACTCT+TGG | - | chr1_3:35146430-35146449 | Msa0116270:intron | 35.0% | |
| ! | CCCTTTTCATATGCTACATT+AGG | - | chr1_3:35146484-35146503 | Msa0116270:intron | 35.0% |
| GCCTAATGTAGCATATGAAA+AGG | + | chr1_3:35146488-35146507 | None:intergenic | 35.0% | |
| AAGTACTCCTTATCCTTACA+TGG | + | chr1_3:35146826-35146845 | None:intergenic | 35.0% | |
| !! | GCTATAAATTTTTGAGCCAC+AGG | + | chr1_3:35147107-35147126 | None:intergenic | 35.0% |
| !! | AAGTTCTGCATTGGCTAAAA+AGG | - | chr1_3:35147145-35147164 | Msa0116270:intron | 35.0% |
| !! | AGTTCTGCATTGGCTAAAAA+GGG | - | chr1_3:35147146-35147165 | Msa0116270:intron | 35.0% |
| CGAAGAAAACTGAAGTAATG+TGG | + | chr1_3:35147304-35147323 | None:intergenic | 35.0% | |
| ! | ATTACTTCAGTTTTCTTCGG+AGG | - | chr1_3:35147305-35147324 | Msa0116270:intron | 35.0% |
| ! | TTACTTCAGTTTTCTTCGGA+GGG | - | chr1_3:35147306-35147325 | Msa0116270:intron | 35.0% |
| GATTAATCCTGGTGGTTTAT+TGG | - | chr1_3:35147328-35147347 | Msa0116270:intron | 35.0% | |
| AGTCAACTATGACAGATATG+AGG | - | chr1_3:35147706-35147725 | Msa0116270:intron | 35.0% | |
| !! | TTTTGGAAGGTTAACTGTAC+CGG | - | chr1_3:35147801-35147820 | Msa0116270:intron | 35.0% |
| ! | GCGAAAAGTTTATTGGTAAC+TGG | - | chr1_3:35147854-35147873 | Msa0116270:intron | 35.0% |
| AGTTCAAAAGACGAAGATAG+TGG | - | chr1_3:35147936-35147955 | Msa0116270:intron | 35.0% | |
| ! | TAAGAGTATAGGTCTGAACT+TGG | - | chr1_3:35148092-35148111 | Msa0116270:intron | 35.0% |
| ! | AAGAGTATAGGTCTGAACTT+GGG | - | chr1_3:35148093-35148112 | Msa0116270:intron | 35.0% |
| ! | CTTTTGCACACGTTTATTGT+AGG | + | chr1_3:35148160-35148179 | None:intergenic | 35.0% |
| CCTTAATTTATCCCAGATGT+AGG | + | chr1_3:35148183-35148202 | None:intergenic | 35.0% | |
| ! | CCTACATCTGGGATAAATTA+AGG | - | chr1_3:35148180-35148199 | Msa0116270:intron | 35.0% |
| ! | TCTGGGATAAATTAAGGAAG+TGG | - | chr1_3:35148186-35148205 | Msa0116270:intron | 35.0% |
| GAGAGTTCTATTTCAGTGTT+TGG | - | chr1_3:35148324-35148343 | Msa0116270:intron | 35.0% | |
| !! | ACTTGTTTTCCAACCAATCT+AGG | + | chr1_3:35148387-35148406 | None:intergenic | 35.0% |
| GTCATATCATCATCAACACT+TGG | + | chr1_3:35148471-35148490 | None:intergenic | 35.0% | |
| TCTTGTAAAACCACAATCGA+CGG | - | chr1_3:35148688-35148707 | Msa0116270:intron | 35.0% | |
| !!! | CATTAGTTTTCCCTGCATTT+AGG | - | chr1_3:35148823-35148842 | Msa0116270:intron | 35.0% |
| GAATTGTTTGCCTAAATGCA+GGG | + | chr1_3:35148836-35148855 | None:intergenic | 35.0% | |
| TGAATTGTTTGCCTAAATGC+AGG | + | chr1_3:35148837-35148856 | None:intergenic | 35.0% | |
| GGCAAACAATTCAAGATCAA+CGG | - | chr1_3:35148844-35148863 | Msa0116270:intron | 35.0% | |
| GTCAAAGTTAAGACGAATTG+AGG | - | chr1_3:35148925-35148944 | Msa0116270:intron | 35.0% | |
| AGGCTCAAGCAGAAAAAATT+AGG | - | chr1_3:35149136-35149155 | Msa0116270:intron | 35.0% | |
| GAAAAAATTAGGACTGTCCA+AGG | - | chr1_3:35149147-35149166 | Msa0116270:intron | 35.0% | |
| ! | TTGGTAGGTTGAAAAGTGTA+CGG | + | chr1_3:35149188-35149207 | None:intergenic | 35.0% |
| TAGCAAGGGTGAATATGATT+TGG | - | chr1_3:35149227-35149246 | Msa0116270:CDS | 35.0% | |
| ! | TGAATATGATTTGGCTGTCA+GGG | - | chr1_3:35149236-35149255 | Msa0116270:CDS | 35.0% |
| CAGTAGGTTTATACATGAGA+GGG | + | chr1_3:35149291-35149310 | None:intergenic | 35.0% | |
| ACAGTAGGTTTATACATGAG+AGG | + | chr1_3:35149292-35149311 | None:intergenic | 35.0% | |
| AAGCATGTGACAGAGTAAAT+TGG | + | chr1_3:35149506-35149525 | None:intergenic | 35.0% | |
| ! | GTCTATGCTTTTCATGTCTA+TGG | - | chr1_3:35149625-35149644 | Msa0116270:five_prime_UTR | 35.0% |
| ! | TTTTTCTTTTTCTTCCGGGG+AGG | + | chr1_3:35144075-35144094 | None:intergenic | 40.0% |
| TCACAACGAGATCTCAACTA+CGG | - | chr1_3:35144244-35144263 | Msa0116270:intron | 40.0% | |
| !! | TAGTATTTCTAGCGGTGATG+AGG | - | chr1_3:35144417-35144436 | Msa0116270:intron | 40.0% |
| TTACATCGTCGAAGAATCGA+GGG | - | chr1_3:35144458-35144477 | Msa0116270:CDS | 40.0% | |
| ATTACTTGTGTCAGACGTGT+CGG | + | chr1_3:35144875-35144894 | None:intergenic | 40.0% | |
| CGAATAATGCACAACCAATG+AGG | + | chr1_3:35145139-35145158 | None:intergenic | 40.0% | |
| !!! | TTAGGAGGTTTTAGCTTGAG+AGG | - | chr1_3:35145209-35145228 | Msa0116270:intron | 40.0% |
| ! | CTTGTTGTATTACGAAGGGA+AGG | - | chr1_3:35145357-35145376 | Msa0116270:intron | 40.0% |
| ! | TTATAGGGTTTGGGTTTGCA+TGG | + | chr1_3:35145657-35145676 | None:intergenic | 40.0% |
| TAGGACGTAATGCTATGTTC+TGG | - | chr1_3:35145683-35145702 | Msa0116270:intron | 40.0% | |
| ! | CAGGTTTTTCTTTTTCCCAC+AGG | + | chr1_3:35146050-35146069 | None:intergenic | 40.0% |
| CTGAACAAGTGTTTCCAAGT+GGG | - | chr1_3:35146111-35146130 | Msa0116270:intron | 40.0% | |
| TGAACAAGTGTTTCCAAGTG+GGG | - | chr1_3:35146112-35146131 | Msa0116270:intron | 40.0% | |
| TTAGTCAGCCCAAGTTCATT+GGG | + | chr1_3:35146207-35146226 | None:intergenic | 40.0% | |
| ATTAGTCAGCCCAAGTTCAT+TGG | + | chr1_3:35146208-35146227 | None:intergenic | 40.0% | |
| TTGGGGTTAAGAGTTGAGAT+AGG | + | chr1_3:35146534-35146553 | None:intergenic | 40.0% | |
| ! | ATTTGGAGCATGGACAAATG+CGG | - | chr1_3:35146656-35146675 | Msa0116270:intron | 40.0% |
| CTATAAGTCCTAGGTATGAG+GGG | + | chr1_3:35146697-35146716 | None:intergenic | 40.0% | |
| GCTATAAGTCCTAGGTATGA+GGG | + | chr1_3:35146698-35146717 | None:intergenic | 40.0% | |
| !! | CTTATAGCGTCGACAAATAC+AGG | - | chr1_3:35146710-35146729 | Msa0116270:intron | 40.0% |
| TAGTGACTAGATGTGTTACC+AGG | + | chr1_3:35146736-35146755 | None:intergenic | 40.0% | |
| !!! | CATCTTCGAGCTAGCTTTTA+GGG | + | chr1_3:35146787-35146806 | None:intergenic | 40.0% |
| !!! | ACATCTTCGAGCTAGCTTTT+AGG | + | chr1_3:35146788-35146807 | None:intergenic | 40.0% |
| CCTTATCCTTACATGGCTTT+GGG | + | chr1_3:35146819-35146838 | None:intergenic | 40.0% | |
| TCCTTATCCTTACATGGCTT+TGG | + | chr1_3:35146820-35146839 | None:intergenic | 40.0% | |
| TTCGTGAAATGAGGGAAACA+AGG | - | chr1_3:35147075-35147094 | Msa0116270:intron | 40.0% | |
| TGAAATGAGGGAAACAAGGA+CGG | - | chr1_3:35147079-35147098 | Msa0116270:intron | 40.0% | |
| !! | GTTCTGCATTGGCTAAAAAG+GGG | - | chr1_3:35147147-35147166 | Msa0116270:intron | 40.0% |
| !! | TTCTGCATTGGCTAAAAAGG+GGG | - | chr1_3:35147148-35147167 | Msa0116270:intron | 40.0% |
| ! | ATGGAATGTGTTGATCCACT+AGG | - | chr1_3:35147203-35147222 | Msa0116270:intron | 40.0% |
| ! | ATGTGTTGATCCACTAGGTT+TGG | - | chr1_3:35147208-35147227 | Msa0116270:intron | 40.0% |
| ! | TGTGTTGATCCACTAGGTTT+GGG | - | chr1_3:35147209-35147228 | Msa0116270:intron | 40.0% |
| CCAGCTATAAGCCAAAAGAA+AGG | + | chr1_3:35147273-35147292 | None:intergenic | 40.0% | |
| !!! | CCTTTCTTTTGGCTTATAGC+TGG | - | chr1_3:35147270-35147289 | Msa0116270:intron | 40.0% |
| TCCTGGTGGTTTATTGGTAT+TGG | - | chr1_3:35147334-35147353 | Msa0116270:intron | 40.0% | |
| ACCAATACCAATAAACCACC+AGG | + | chr1_3:35147338-35147357 | None:intergenic | 40.0% | |
| !!! | GTGAAGGTTCTGTTTTTGGA+AGG | - | chr1_3:35147788-35147807 | Msa0116270:intron | 40.0% |
| ATTCTAGCATAACTGTCTGC+CGG | + | chr1_3:35147823-35147842 | None:intergenic | 40.0% | |
| ! | TCAAAAGACGAAGATAGTGG+AGG | - | chr1_3:35147939-35147958 | Msa0116270:intron | 40.0% |
| TAGTGGAGGAAAAACACCAT+AGG | - | chr1_3:35147953-35147972 | Msa0116270:intron | 40.0% | |
| AGAGTATAGGTCTGAACTTG+GGG | - | chr1_3:35148094-35148113 | Msa0116270:intron | 40.0% | |
| TTAGATTGAGTCCTGAGTTG+TGG | + | chr1_3:35148130-35148149 | None:intergenic | 40.0% | |
| TAAAACCACAATCGACGGTA+TGG | - | chr1_3:35148693-35148712 | Msa0116270:intron | 40.0% | |
| ! | GAGAAAGAGAGTGTGAACTT+GGG | + | chr1_3:35148804-35148823 | None:intergenic | 40.0% |
| ! | TGAGAAAGAGAGTGTGAACT+TGG | + | chr1_3:35148805-35148824 | None:intergenic | 40.0% |
| TATTCAAGGAGTTAGTTCGC+AGG | - | chr1_3:35148988-35149007 | Msa0116270:intron | 40.0% | |
| TGGCTTCTTATGAGTTGTGT+AGG | - | chr1_3:35149116-35149135 | Msa0116270:intron | 40.0% | |
| ! | GTGAATATGATTTGGCTGTC+AGG | - | chr1_3:35149235-35149254 | Msa0116270:CDS | 40.0% |
| GAACATTCTTTCTTCCTCCC+CGG | - | chr1_3:35144058-35144077 | Msa0116270:CDS | 45.0% | |
| AACGGAATGGGATAGAGAAG+AGG | + | chr1_3:35144135-35144154 | None:intergenic | 45.0% | |
| ATTGCTCCTTTAACGCCATC+TGG | + | chr1_3:35144225-35144244 | None:intergenic | 45.0% | |
| ACAACTCTCCCTTTCGTTTG+AGG | + | chr1_3:35144364-35144383 | None:intergenic | 45.0% | |
| ! | TGATGACGATGATTCCGAAG+TGG | - | chr1_3:35144387-35144406 | Msa0116270:intron | 45.0% |
| GTTACATCGTCGAAGAATCG+AGG | - | chr1_3:35144457-35144476 | Msa0116270:CDS | 45.0% | |
| TCAACATGCTTCCAACGACT+AGG | + | chr1_3:35144535-35144554 | None:intergenic | 45.0% | |
| ! | GAAGCATGTTGATGAAGCTG+AGG | - | chr1_3:35144543-35144562 | Msa0116270:CDS | 45.0% |
| !! | TACGAAGTGCTGACACAAAC+AGG | - | chr1_3:35144778-35144797 | Msa0116270:CDS | 45.0% |
| !! | ACGAAGTGCTGACACAAACA+GGG | - | chr1_3:35144779-35144798 | Msa0116270:CDS | 45.0% |
| !! | ATAATCTTGGTGTCGGACAC+TGG | - | chr1_3:35144844-35144863 | Msa0116270:intron | 45.0% |
| ACGTTGACACATGTTGGACA+CGG | - | chr1_3:35144943-35144962 | Msa0116270:intron | 45.0% | |
| TGGCAGTGTCAATTCCTCAT+TGG | - | chr1_3:35145122-35145141 | Msa0116270:CDS | 45.0% | |
| AGCATGTCCAAAGGACCAAA+TGG | + | chr1_3:35145278-35145297 | None:intergenic | 45.0% | |
| ! | AAGTCTGGAAGCATGTCCAA+AGG | + | chr1_3:35145287-35145306 | None:intergenic | 45.0% |
| TGGTTCAAACCAGTAGTCCA+TGG | + | chr1_3:35145416-35145435 | None:intergenic | 45.0% | |
| CATGAACCCTTGAACATAGC+CGG | - | chr1_3:35145472-35145491 | Msa0116270:intron | 45.0% | |
| AAAGCTCCGGCTATGTTCAA+GGG | + | chr1_3:35145481-35145500 | None:intergenic | 45.0% | |
| TAAAGCTCCGGCTATGTTCA+AGG | + | chr1_3:35145482-35145501 | None:intergenic | 45.0% | |
| TTTAGAAGGTCTCACTGCGA+TGG | - | chr1_3:35145513-35145532 | Msa0116270:intron | 45.0% | |
| GTCCCATATTGGATGAGAGA+TGG | - | chr1_3:35146087-35146106 | Msa0116270:intron | 45.0% | |
| GGCCATCTCTCATCCAATAT+GGG | + | chr1_3:35146092-35146111 | None:intergenic | 45.0% | |
| AGGCCATCTCTCATCCAATA+TGG | + | chr1_3:35146093-35146112 | None:intergenic | 45.0% | |
| CCACTTGGAAACACTTGTTC+AGG | + | chr1_3:35146113-35146132 | None:intergenic | 45.0% | |
| CCTGAACAAGTGTTTCCAAG+TGG | - | chr1_3:35146110-35146129 | Msa0116270:intron | 45.0% | |
| GAACAAGTGTTTCCAAGTGG+GGG | - | chr1_3:35146113-35146132 | Msa0116270:intron | 45.0% | |
| !! | CCTTAAAAAACCGGCTTGTG+AGG | + | chr1_3:35146148-35146167 | None:intergenic | 45.0% |
| !!! | CCTCACAAGCCGGTTTTTTA+AGG | - | chr1_3:35146145-35146164 | Msa0116270:intron | 45.0% |
| TACGAGCACTCTTGGAATCT+AGG | - | chr1_3:35146438-35146457 | Msa0116270:intron | 45.0% | |
| AGCACTCTTGGAATCTAGGA+TGG | - | chr1_3:35146442-35146461 | Msa0116270:intron | 45.0% | |
| TCTCATGCCCAAGAGACATT+TGG | - | chr1_3:35146639-35146658 | Msa0116270:intron | 45.0% | |
| CCATGCTCCAAATGTCTCTT+GGG | + | chr1_3:35146649-35146668 | None:intergenic | 45.0% | |
| TCCATGCTCCAAATGTCTCT+TGG | + | chr1_3:35146650-35146669 | None:intergenic | 45.0% | |
| ! | TTTGGAGCATGGACAAATGC+GGG | - | chr1_3:35146657-35146676 | Msa0116270:intron | 45.0% |
| CGCTATAAGTCCTAGGTATG+AGG | + | chr1_3:35146699-35146718 | None:intergenic | 45.0% | |
| TTGTCGACGCTATAAGTCCT+AGG | + | chr1_3:35146706-35146725 | None:intergenic | 45.0% | |
| AAAGCTAGCTCGAAGATGTG+AGG | - | chr1_3:35146789-35146808 | Msa0116270:intron | 45.0% | |
| CCCAAAGCCATGTAAGGATA+AGG | - | chr1_3:35146816-35146835 | Msa0116270:intron | 45.0% | |
| AGCCATATCTCTAGTCGATG+TGG | - | chr1_3:35146847-35146866 | Msa0116270:intron | 45.0% | |
| GCCATATCTCTAGTCGATGT+GGG | - | chr1_3:35146848-35146867 | Msa0116270:intron | 45.0% | |
| ! | TCCCACATCGACTAGAGATA+TGG | + | chr1_3:35146852-35146871 | None:intergenic | 45.0% |
| ! | TTCTTTGACAGCTTGCTCGT+AGG | - | chr1_3:35147051-35147070 | Msa0116270:intron | 45.0% |
| ! | TCTTTGACAGCTTGCTCGTA+GGG | - | chr1_3:35147052-35147071 | Msa0116270:intron | 45.0% |
| TCGTAGGGTTCGTGAAATGA+GGG | - | chr1_3:35147067-35147086 | Msa0116270:intron | 45.0% | |
| !! | TCTGCATTGGCTAAAAAGGG+GGG | - | chr1_3:35147149-35147168 | Msa0116270:intron | 45.0% |
| ACGAGGGAATGACTGTAAGT+AGG | + | chr1_3:35147180-35147199 | None:intergenic | 45.0% | |
| TACTTACAGTCATTCCCTCG+TGG | - | chr1_3:35147179-35147198 | Msa0116270:intron | 45.0% | |
| ! | GTGTTGATCCACTAGGTTTG+GGG | - | chr1_3:35147210-35147229 | Msa0116270:intron | 45.0% |
| GAACTTTACCCCAAACCTAG+TGG | + | chr1_3:35147221-35147240 | None:intergenic | 45.0% | |
| ! | CATTGCGTGTGCCTTTCTTT+TGG | - | chr1_3:35147259-35147278 | Msa0116270:intron | 45.0% |
| TTCTTCGGAGGGATTAATCC+TGG | - | chr1_3:35147317-35147336 | Msa0116270:intron | 45.0% | |
| AGGAGAACTGTCTGAAGACT+CGG | + | chr1_3:35147402-35147421 | None:intergenic | 45.0% | |
| CAGTTCTCCTAAGACTGACA+AGG | - | chr1_3:35147412-35147431 | Msa0116270:intron | 45.0% | |
| TCAGCATCCTTGTCAGTCTT+AGG | + | chr1_3:35147422-35147441 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr1_3:35147550-35147569 | Msa0116270:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr1_3:35147551-35147570 | Msa0116270:intron | 45.0% |
| TGACTGTAAGACTGCTTCCT+AGG | + | chr1_3:35147691-35147710 | None:intergenic | 45.0% | |
| GAGTATAGGTCTGAACTTGG+GGG | - | chr1_3:35148095-35148114 | Msa0116270:intron | 45.0% | |
| GTGTGCAAAAGCCTACATCT+GGG | - | chr1_3:35148169-35148188 | Msa0116270:intron | 45.0% | |
| GGAAGTGGTCACAAAACTGA+AGG | - | chr1_3:35148201-35148220 | Msa0116270:intron | 45.0% | |
| ! | TCTCTCTGGTGTTTTGCTCA+TGG | - | chr1_3:35148292-35148311 | Msa0116270:intron | 45.0% |
| ! | TAATACAAGTGCTGCTGACC+TGG | - | chr1_3:35148576-35148595 | Msa0116270:intron | 45.0% |
| TACTGAGCAGAGAAAGCAGT+TGG | - | chr1_3:35148639-35148658 | Msa0116270:intron | 45.0% | |
| GCAGAGAAAGCAGTTGGTTA+AGG | - | chr1_3:35148645-35148664 | Msa0116270:intron | 45.0% | |
| GAATTGAGGATGACCCTGAA+GGG | - | chr1_3:35148939-35148958 | Msa0116270:intron | 45.0% | |
| GCGTTCGAATAAAGGCTTCA+AGG | + | chr1_3:35149023-35149042 | None:intergenic | 45.0% | |
| AACCTACCAAGTACTATCCG+TGG | - | chr1_3:35149198-35149217 | Msa0116270:CDS | 45.0% | |
| AGAGGGAAGAGCAATTGACT+TGG | + | chr1_3:35149274-35149293 | None:intergenic | 45.0% | |
| CCTCTTCAAGAACACGTTTC+AGG | + | chr1_3:35149580-35149599 | None:intergenic | 45.0% | |
| CCTGAAACGTGTTCTTGAAG+AGG | - | chr1_3:35149577-35149596 | Msa0116270:five_prime_UTR | 45.0% | |
| CCGGTGAATGTGAACGGAAT+GGG | + | chr1_3:35144147-35144166 | None:intergenic | 50.0% | |
| CCCATTCCGTTCACATTCAC+CGG | - | chr1_3:35144144-35144163 | Msa0116270:intron | 50.0% | |
| TGAAGACGAGCTTCTCCAGA+TGG | - | chr1_3:35144207-35144226 | Msa0116270:intron | 50.0% | |
| GCTTCTCCAGATGGCGTTAA+AGG | - | chr1_3:35144216-35144235 | Msa0116270:intron | 50.0% | |
| !! | GGGTTTTCGAGGATTGGAAG+AGG | + | chr1_3:35144275-35144294 | None:intergenic | 50.0% |
| !! | TAGTTAGCGACGGGTTTTCG+AGG | + | chr1_3:35144286-35144305 | None:intergenic | 50.0% |
| GGTTGAACGTAGTTAGCGAC+GGG | + | chr1_3:35144295-35144314 | None:intergenic | 50.0% | |
| CGGTTGAACGTAGTTAGCGA+CGG | + | chr1_3:35144296-35144315 | None:intergenic | 50.0% | |
| ! | TTTCGTTTGAGGTTTCGCGG+TGG | + | chr1_3:35144353-35144372 | None:intergenic | 50.0% |
| ACCGCGAAACCTCAAACGAA+AGG | - | chr1_3:35144352-35144371 | Msa0116270:intron | 50.0% | |
| ! | CCCTTTCGTTTGAGGTTTCG+CGG | + | chr1_3:35144356-35144375 | None:intergenic | 50.0% |
| CCGCGAAACCTCAAACGAAA+GGG | - | chr1_3:35144353-35144372 | Msa0116270:intron | 50.0% | |
| !! | CGAAGTGCTGACACAAACAG+GGG | - | chr1_3:35144780-35144799 | Msa0116270:intron | 50.0% |
| ! | GTGTCGACGTTGACACATGT+TGG | - | chr1_3:35144937-35144956 | Msa0116270:intron | 50.0% |
| AGGAATTGACACTGCCAGAG+CGG | + | chr1_3:35145119-35145138 | None:intergenic | 50.0% | |
| ! | ACGATGTGACCATGGACTAC+TGG | - | chr1_3:35145404-35145423 | Msa0116270:intron | 50.0% |
| CGGCTATGTTCAAGGGTTCA+TGG | + | chr1_3:35145474-35145493 | None:intergenic | 50.0% | |
| !! | AAAAACCGGCTTGTGAGGTG+AGG | + | chr1_3:35146143-35146162 | None:intergenic | 50.0% |
| GGCTGTCTACTTGTGTTGAG+TGG | - | chr1_3:35146299-35146318 | Msa0116270:CDS | 50.0% | |
| CTTGGACATTCCTCACCTCT+GGG | + | chr1_3:35146563-35146582 | None:intergenic | 50.0% | |
| ! | CCCAAGAGACATTTGGAGCA+TGG | - | chr1_3:35146646-35146665 | Msa0116270:intron | 50.0% |
| TAACAGCACCCCTCATACCT+AGG | - | chr1_3:35146686-35146705 | Msa0116270:intron | 50.0% | |
| GGATTGCCCAAAGCCATGTA+AGG | - | chr1_3:35146810-35146829 | Msa0116270:intron | 50.0% | |
| CTCGTAGGGTTCGTGAAATG+AGG | - | chr1_3:35147066-35147085 | Msa0116270:intron | 50.0% | |
| !! | CTGCATTGGCTAAAAAGGGG+GGG | - | chr1_3:35147150-35147169 | Msa0116270:intron | 50.0% |
| CAACACATTCCATGCCACGA+GGG | + | chr1_3:35147196-35147215 | None:intergenic | 50.0% | |
| TCAACACATTCCATGCCACG+AGG | + | chr1_3:35147197-35147216 | None:intergenic | 50.0% | |
| TTCGGAGGGATTAATCCTGG+TGG | - | chr1_3:35147320-35147339 | Msa0116270:intron | 50.0% | |
| GATGCTGATAGCAACCTACG+TGG | - | chr1_3:35147434-35147453 | Msa0116270:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr1_3:35147552-35147571 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr1_3:35147549-35147568 | Msa0116270:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1_3:35147555-35147574 | Msa0116270:intron | 50.0% | |
| ACACCATAGGCTTCACACCT+AGG | - | chr1_3:35147966-35147985 | Msa0116270:intron | 50.0% | |
| CACCATAGGCTTCACACCTA+GGG | - | chr1_3:35147967-35147986 | Msa0116270:intron | 50.0% | |
| AACCCTAGGTGTGAAGCCTA+TGG | + | chr1_3:35147972-35147991 | None:intergenic | 50.0% | |
| CGTGTGCAAAAGCCTACATC+TGG | - | chr1_3:35148168-35148187 | Msa0116270:intron | 50.0% | |
| ! | TCTGGTGTTTTGCTCATGGC+TGG | - | chr1_3:35148296-35148315 | Msa0116270:intron | 50.0% |
| ! | CAAGTCCATACCGTCGATTG+TGG | + | chr1_3:35148701-35148720 | None:intergenic | 50.0% |
| CGAATTGAGGATGACCCTGA+AGG | - | chr1_3:35148938-35148957 | Msa0116270:intron | 50.0% | |
| TGCCACGGATAGTACTTGGT+AGG | + | chr1_3:35149203-35149222 | None:intergenic | 50.0% | |
| ATGCTGCCACGGATAGTACT+TGG | + | chr1_3:35149207-35149226 | None:intergenic | 50.0% | |
| TATCCGTGGCAGCATTAGCA+AGG | - | chr1_3:35149212-35149231 | Msa0116270:CDS | 50.0% | |
| ATCCGTGGCAGCATTAGCAA+GGG | - | chr1_3:35149213-35149232 | Msa0116270:CDS | 50.0% | |
| GCCGGTGAATGTGAACGGAA+TGG | + | chr1_3:35144148-35144167 | None:intergenic | 55.0% | |
| GCTTCGCCGGTGAATGTGAA+CGG | + | chr1_3:35144153-35144172 | None:intergenic | 55.0% | |
| GAAACTCGTCACTGCTTCGC+CGG | + | chr1_3:35144166-35144185 | None:intergenic | 55.0% | |
| !! | AGCGACGGGTTTTCGAGGAT+TGG | + | chr1_3:35144281-35144300 | None:intergenic | 55.0% |
| GAGCGTTTCGGTTGAGACGA+CGG | + | chr1_3:35144319-35144338 | None:intergenic | 55.0% | |
| TCGTCGAAGAATCGAGGGAG+TGG | - | chr1_3:35144463-35144482 | Msa0116270:CDS | 55.0% | |
| TCGAGGGAGTGGAAGAACTC+CGG | - | chr1_3:35144474-35144493 | Msa0116270:CDS | 55.0% | |
| ATGGTGAGGAGCCTAGTCGT+TGG | - | chr1_3:35144521-35144540 | Msa0116270:CDS | 55.0% | |
| GTAGTCCTCACCTCACAAGC+CGG | - | chr1_3:35146135-35146154 | Msa0116270:intron | 55.0% | |
| TAACCCCAAGCGATACCCAG+AGG | - | chr1_3:35146545-35146564 | Msa0116270:CDS | 55.0% | |
| ! | TCACCTCTGGGTATCGCTTG+GGG | + | chr1_3:35146551-35146570 | None:intergenic | 55.0% |
| ! | CTCACCTCTGGGTATCGCTT+GGG | + | chr1_3:35146552-35146571 | None:intergenic | 55.0% |
| GCTTGGACATTCCTCACCTC+TGG | + | chr1_3:35146564-35146583 | None:intergenic | 55.0% | |
| !! | AGCGTCGACAAATACAGGCC+TGG | - | chr1_3:35146715-35146734 | Msa0116270:intron | 55.0% |
| ACAGTCATTCCCTCGTGGCA+TGG | - | chr1_3:35147184-35147203 | Msa0116270:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1_3:35147557-35147576 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1_3:35147563-35147582 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_3:35147564-35147583 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_3:35147563-35147582 | Msa0116270:intron | 55.0% | |
| GCTTCACACCTAGGGTTCTC+AGG | - | chr1_3:35147975-35147994 | Msa0116270:intron | 55.0% | |
| GGCTAACGAGTCCACAACTC+AGG | - | chr1_3:35148116-35148135 | Msa0116270:intron | 55.0% | |
| ! | TACAAGTGCTGCTGACCTGG+AGG | - | chr1_3:35148579-35148598 | Msa0116270:intron | 55.0% |
| AGGATGACCCTGAAGGGTCT+GGG | - | chr1_3:35148945-35148964 | Msa0116270:intron | 55.0% | |
| CTGTCCAAGGGATGCTACAG+AGG | - | chr1_3:35149160-35149179 | Msa0116270:CDS | 55.0% | |
| GGAACCTCTGTAGCATCCCT+TGG | + | chr1_3:35149167-35149186 | None:intergenic | 55.0% | |
| CACCCTTGCTAATGCTGCCA+CGG | + | chr1_3:35149218-35149237 | None:intergenic | 55.0% | |
| ! | GGCTGTCAGGGAGTACAAGA+AGG | - | chr1_3:35149248-35149267 | Msa0116270:CDS | 55.0% |
| CGTTTCGGTTGAGACGACGG+CGG | + | chr1_3:35144316-35144335 | None:intergenic | 60.0% | |
| ! | GTTTGAGGTTTCGCGGTGGC+CGG | + | chr1_3:35144349-35144368 | None:intergenic | 60.0% |
| GAGTGGAAGAACTCCGGCGA+GGG | - | chr1_3:35144480-35144499 | Msa0116270:CDS | 60.0% | |
| GAGGGAGGAGGATCGGACTT+GGG | - | chr1_3:35144498-35144517 | Msa0116270:CDS | 60.0% | |
| GAGGAGGATCGGACTTGGGA+TGG | - | chr1_3:35144502-35144521 | Msa0116270:CDS | 60.0% | |
| GGATCGGACTTGGGATGGTG+AGG | - | chr1_3:35144507-35144526 | Msa0116270:CDS | 60.0% | |
| ! | TCTTCCACTCTGTGCCGCTC+TGG | - | chr1_3:35145102-35145121 | Msa0116270:CDS | 60.0% |
| TCTCACTGCGATGGCGAGCT+TGG | - | chr1_3:35145522-35145541 | Msa0116270:intron | 60.0% | |
| CTCACTGCGATGGCGAGCTT+GGG | - | chr1_3:35145523-35145542 | Msa0116270:intron | 60.0% | |
| AGGTGAGGACTACCCCCACT+TGG | + | chr1_3:35146128-35146147 | None:intergenic | 60.0% | |
| ! | CCTCACCTCTGGGTATCGCT+TGG | + | chr1_3:35146553-35146572 | None:intergenic | 60.0% |
| CCAAGCGATACCCAGAGGTG+AGG | - | chr1_3:35146550-35146569 | Msa0116270:CDS | 60.0% | |
| GGAGCATGGACAAATGCGGG+CGG | - | chr1_3:35146660-35146679 | Msa0116270:intron | 60.0% | |
| GGAAACAAGGACGGCACCTG+TGG | - | chr1_3:35147088-35147107 | Msa0116270:intron | 60.0% | |
| CACCTAGGGTTCTCAGGTCC+AGG | - | chr1_3:35147981-35148000 | Msa0116270:intron | 60.0% | |
| TGCCTGGACCTGAGAACCCT+AGG | + | chr1_3:35147986-35148005 | None:intergenic | 60.0% | |
| GAGGATGACCCTGAAGGGTC+TGG | - | chr1_3:35148944-35148963 | Msa0116270:intron | 60.0% | |
| GGGAAGTCCCAGACCCTTCA+GGG | + | chr1_3:35148955-35148974 | None:intergenic | 60.0% | |
| TGGGAAGTCCCAGACCCTTC+AGG | + | chr1_3:35148956-35148975 | None:intergenic | 60.0% | |
| ACCGAAACGCTCAGCGCCTC+CGG | - | chr1_3:35144327-35144346 | Msa0116270:intron | 65.0% | |
| GGAGTGGAAGAACTCCGGCG+AGG | - | chr1_3:35144479-35144498 | Msa0116270:CDS | 65.0% | |
| TGGAAGAACTCCGGCGAGGG+AGG | - | chr1_3:35144483-35144502 | Msa0116270:CDS | 65.0% | |
| AAGAACTCCGGCGAGGGAGG+AGG | - | chr1_3:35144486-35144505 | Msa0116270:CDS | 65.0% | |
| CGAGGGAGGAGGATCGGACT+TGG | - | chr1_3:35144497-35144516 | Msa0116270:CDS | 65.0% | |
| ACTGCCAGAGCGGCACAGAG+TGG | + | chr1_3:35145109-35145128 | None:intergenic | 65.0% | |
| ! | AGTGCTGCTGACCTGGAGGC+TGG | - | chr1_3:35148583-35148602 | Msa0116270:intron | 65.0% |
| !! | GCCGGAGGCGCTGAGCGTTT+CGG | + | chr1_3:35144331-35144350 | None:intergenic | 70.0% |
| TGAGGTTTCGCGGTGGCCGG+AGG | + | chr1_3:35144346-35144365 | None:intergenic | 70.0% | |
| CTCCGGCGAGGGAGGAGGAT+CGG | - | chr1_3:35144491-35144510 | Msa0116270:CDS | 70.0% | |
| GTCCGATCCTCCTCCCTCGC+CGG | + | chr1_3:35144496-35144515 | None:intergenic | 70.0% | |
| TGACCTGGAGGCTGGTGCGC+TGG | - | chr1_3:35148591-35148610 | Msa0116270:intron | 70.0% | |
| AAGCCAGCGCACCAGCCTCC+AGG | + | chr1_3:35148597-35148616 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 35144043 | 35149673 | 35144043 | ID=Msa0116270;Name=Msa0116270 |
| chr1_3 | mRNA | 35144043 | 35149673 | 35144043 | ID=Msa0116270-mRNA-1;Parent=Msa0116270;Name=Msa0116270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=147|0.66|0.71|1|1|0.71|7|0|408 |
| chr1_3 | exon | 35144043 | 35144153 | 35144043 | ID=Msa0116270-mRNA-1:exon:11256;Parent=Msa0116270-mRNA-1 |
| chr1_3 | exon | 35144420 | 35144578 | 35144420 | ID=Msa0116270-mRNA-1:exon:11255;Parent=Msa0116270-mRNA-1 |
| chr1_3 | exon | 35144671 | 35144798 | 35144671 | ID=Msa0116270-mRNA-1:exon:11254;Parent=Msa0116270-mRNA-1 |
| chr1_3 | exon | 35145007 | 35145201 | 35145007 | ID=Msa0116270-mRNA-1:exon:11253;Parent=Msa0116270-mRNA-1 |
| chr1_3 | exon | 35146264 | 35146349 | 35146264 | ID=Msa0116270-mRNA-1:exon:11252;Parent=Msa0116270-mRNA-1 |
| chr1_3 | exon | 35146485 | 35146654 | 35146485 | ID=Msa0116270-mRNA-1:exon:11251;Parent=Msa0116270-mRNA-1 |
| chr1_3 | exon | 35149152 | 35149673 | 35149152 | ID=Msa0116270-mRNA-1:exon:11250;Parent=Msa0116270-mRNA-1 |
| chr1_3 | five_prime_UTR | 35149527 | 35149673 | 35149527 | ID=Msa0116270-mRNA-1:five_prime_utr;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35149152 | 35149526 | 35149152 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35146485 | 35146654 | 35146485 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35146264 | 35146349 | 35146264 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35145007 | 35145201 | 35145007 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35144671 | 35144798 | 35144671 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35144420 | 35144578 | 35144420 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| chr1_3 | CDS | 35144043 | 35144153 | 35144043 | ID=Msa0116270-mRNA-1:cds;Parent=Msa0116270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
