AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0689760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689760 MtrunA17_Chr5g0404061 94.747 990 14 2 1 962 1 980 0.0 1899
Msa0689760 MtrunA17_Chr8g0373371 69.378 1045 219 10 1 961 1 1028 0.0 1420
Msa0689760 MtrunA17_Chr8g0370071 98.387 62 1 0 489 550 1 62 2.16e-34 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0689760 AT4G36630.1 66.963 1011 274 13 1 962 1 1000 0.0 1326
Msa0689760 AT4G36630.2 66.851 902 249 12 1 853 1 901 0.0 1184

Find 201 sgRNAs with CRISPR-Local

Find 707 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCCTCGGTAAAAGTTTA+AGG 0.125485 4_4:+56976808 None:intergenic
ACTTAAATGCTCAACAAAAT+TGG 0.144709 4_4:-56977616 Msa0689760:CDS
TTCGATCTTGCCGTTGAAAT+TGG 0.169757 4_4:+56985656 None:intergenic
CAGGATTTGCAATCATTTCT+TGG 0.207715 4_4:-56976612 Msa0689760:CDS
GGTAATATTTCGGTTGGTTC+TGG 0.234591 4_4:-56979556 Msa0689760:CDS
TTCTATTCAAGGTCTCTTTC+CGG 0.249789 4_4:-56984032 Msa0689760:CDS
CTCCAAGCATTGCTTCTTAC+TGG 0.273542 4_4:-56979496 Msa0689760:CDS
CAATATGATAATGCCAATTC+TGG 0.288745 4_4:+56977209 None:intergenic
GTCAGGTGTTTCAGATGATA+TGG 0.290151 4_4:-56980140 Msa0689760:CDS
CCGTCGGGAGAGCTGCTTCT+TGG 0.296209 4_4:-56984530 Msa0689760:CDS
TGAGAATTCCAGAACAAGTA+TGG 0.303616 4_4:+56978094 None:intergenic
TCTCTGTGCCGAAAGAAAAT+AGG 0.306759 4_4:-56976196 Msa0689760:CDS
ATTGTCCAACTAACTGCTTC+TGG 0.310438 4_4:-56983775 Msa0689760:CDS
ACCGAGGGAGACTAAGTTAC+AGG 0.317122 4_4:-56976796 Msa0689760:intron
GGGGTCTTTGTGGATCAAAA+TGG 0.325153 4_4:-56984350 Msa0689760:CDS
TTTGTGGAGGTGAAAGAGTT+TGG 0.330078 4_4:-56984704 Msa0689760:CDS
AAGTACTTAGCTTGCATGTT+TGG 0.331692 4_4:+56977972 None:intergenic
ATATATGTTTGGGGATTAGA+AGG 0.342950 4_4:-56984640 Msa0689760:CDS
AACGAATCATAATATGCTTA+TGG 0.346723 4_4:-56980074 Msa0689760:CDS
AGTTGTCTTTGGAAGGATAA+TGG 0.347247 4_4:+56980225 None:intergenic
TGATCGGAGAATTCTGTTTC+CGG 0.348640 4_4:+56985567 None:intergenic
CGCAGGTGGGATAGAATAAA+TGG 0.349821 4_4:-56976840 Msa0689760:CDS
GTTTCATAGATTACCTAGTT+TGG 0.350234 4_4:-56985430 Msa0689760:CDS
AATAGATTTGCATAAGCAAT+AGG 0.353003 4_4:+56977129 None:intergenic
CTGTTTCCGGCGAGTAGATT+CGG 0.354495 4_4:+56985580 None:intergenic
CACATTAGCACCTTTAGCTT+TGG 0.356330 4_4:+56985389 None:intergenic
AGGATTTGCAATCATTTCTT+GGG 0.359164 4_4:-56976611 Msa0689760:CDS
AAGAGGGATCAATTCATATA+AGG 0.360242 4_4:-56983684 Msa0689760:intron
GTAGCTTCATGTTCCAGAAT+TGG 0.360731 4_4:-56977222 Msa0689760:intron
GACGGATCCCATACTTGTTC+TGG 0.362031 4_4:-56978102 Msa0689760:CDS
GGTCTCTTTCCGGTTCCTCT+TGG 0.363301 4_4:-56984022 Msa0689760:CDS
TGCATTCTCGTCGGTTGGTA+AGG 0.363589 4_4:+56980114 None:intergenic
TCATGAACAATAGTTGTCTT+TGG 0.365434 4_4:+56980214 None:intergenic
TGGAAATATACCAGCTGATA+TGG 0.371949 4_4:-56978021 Msa0689760:CDS
ATGAATGAGAATGCCATATC+TGG 0.374201 4_4:-56977933 Msa0689760:CDS
AAATTATTGTCGGCTTTAGA+AGG 0.375333 4_4:-56977563 Msa0689760:CDS
GACCAACAAATCCTGCCTTC+AGG 0.381825 4_4:+56984317 None:intergenic
CCAGAGAAGTTGGACATTGA+TGG 0.384030 4_4:-56980190 Msa0689760:CDS
CTTTCTCAACTGAGACCCTT+TGG 0.384880 4_4:+56976087 None:intergenic
TCGATCTTGCCGTTGAAATT+GGG 0.395645 4_4:+56985657 None:intergenic
TAACTCCGTGATACTTGCTT+TGG 0.398361 4_4:-56984059 Msa0689760:CDS
GGAGAACATTGGGGTCTTTG+TGG 0.400346 4_4:-56984360 Msa0689760:CDS
TCAGGGGCGTGGTAATATTT+CGG 0.401268 4_4:-56979566 Msa0689760:intron
TGACGAAACTCTGGAAAGAT+AGG 0.401467 4_4:+56980159 None:intergenic
CTCTGTGCCGAAAGAAAATA+GGG 0.407080 4_4:-56976195 Msa0689760:CDS
CCATCAATGTCCAACTTCTC+TGG 0.407872 4_4:+56980190 None:intergenic
GCGACAGAGCGAAAACCTTC+AGG 0.409251 4_4:-56976532 Msa0689760:intron
TTCCTGAAGGCAGGATTTGT+TGG 0.411916 4_4:-56984319 Msa0689760:CDS
AACACTTCCATTGAAACAAC+AGG 0.413460 4_4:+56985495 None:intergenic
ATTGTCTCTGTATGTTCATA+AGG 0.416059 4_4:-56977435 Msa0689760:intron
AAGCTTGCTGTGGTCTTTCG+AGG 0.416092 4_4:+56977101 None:intergenic
TTTCGGTTGGTTCTGGAGCT+CGG 0.416243 4_4:-56979549 Msa0689760:CDS
GCACGTAGACTTGAATCTTC+AGG 0.417466 4_4:+56983712 None:intergenic
CTCTTACTCGGTTGCTCCGA+TGG 0.419869 4_4:-56985609 Msa0689760:CDS
ATAACTATGCATCCTACAAT+AGG 0.421989 4_4:-56979958 Msa0689760:CDS
CTCCCTCGGTAAAAGTTTAA+GGG 0.423938 4_4:+56976809 None:intergenic
ATAGTTTGTATCAACGGATA+AGG 0.424246 4_4:+56984118 None:intergenic
AGATTCTTCTCGAGTGTGTA+AGG 0.425089 4_4:+56985537 None:intergenic
GAAGAAGTTCAAGAGCTTGC+CGG 0.425673 4_4:+56979344 None:intergenic
GCTTTGGATAATTCTATTCA+AGG 0.429881 4_4:-56984043 Msa0689760:CDS
CTTCTCGAGTGTGTAAGGTT+TGG 0.431846 4_4:+56985542 None:intergenic
GTGTGGGGAGAATATATGTT+TGG 0.431947 4_4:-56984651 Msa0689760:CDS
CTTAAATGCTCAACAAAATT+GGG 0.432130 4_4:-56977615 Msa0689760:CDS
AGACGTTTCAGCAGAGCCTC+TGG 0.433778 4_4:+56977524 None:intergenic
GTCGGCTTTAGAAGGCATAT+CGG 0.433838 4_4:-56977555 Msa0689760:CDS
TGTGGGGAGAATATATGTTT+GGG 0.438071 4_4:-56984650 Msa0689760:CDS
TCCGGTTCCTCTTGGAGCCC+AGG 0.438180 4_4:-56984014 Msa0689760:intron
ACCTGGGCTCCAAGAGGAAC+CGG 0.441245 4_4:+56984013 None:intergenic
TAGCAAGAGCATGATTCAAT+TGG 0.441460 4_4:-56976292 Msa0689760:CDS
ACCTATCTGACGTACTTGAT+TGG 0.443552 4_4:-56977646 Msa0689760:CDS
AAGAAAATTGCGGAGATTGA+GGG 0.445231 4_4:-56976984 Msa0689760:CDS
AGCTTTGCTGCCTAGATTCG+TGG 0.448234 4_4:-56984252 Msa0689760:CDS
CTCATGGACTTCACCATGTC+CGG 0.448544 4_4:+56984677 None:intergenic
GGCATTATCATATTGTGATC+GGG 0.449096 4_4:-56977201 Msa0689760:CDS
TGCACGAGAGTGCTCCCGTT+GGG 0.451076 4_4:+56976151 None:intergenic
GGGTCTTTGTGGATCAAAAT+GGG 0.452687 4_4:-56984349 Msa0689760:CDS
TGAAACACCTGACGAAACTC+TGG 0.452802 4_4:+56980150 None:intergenic
TGAAGAGCGTGCAATATTGT+TGG 0.454529 4_4:-56977483 Msa0689760:CDS
AGTTTCCAGAAGCAGTTAGT+TGG 0.458669 4_4:+56983770 None:intergenic
TGGTGCACTACCTCTAGAAA+TGG 0.459530 4_4:+56977037 None:intergenic
AGCAGCTCTCCCGACGGAAT+AGG 0.460605 4_4:+56984536 None:intergenic
TTCGGTTGGTTCTGGAGCTC+GGG 0.460897 4_4:-56979548 Msa0689760:CDS
TGGTTCTGGAGCTCGGGAGA+TGG 0.465680 4_4:-56979542 Msa0689760:CDS
GAAGAGCGTGCAATATTGTT+GGG 0.469594 4_4:-56977482 Msa0689760:CDS
TGTTCATGAGCCAGAGAAGT+TGG 0.471501 4_4:-56980200 Msa0689760:CDS
CAGAGAAGTTGGACATTGAT+GGG 0.472173 4_4:-56980189 Msa0689760:CDS
ATTGTGGATGTAGGTGGTAG+GGG 0.472436 4_4:-56984728 Msa0689760:intron
GCATTCTCGTCGGTTGGTAA+GGG 0.485407 4_4:+56980115 None:intergenic
AAAGAAAATTGCGGAGATTG+AGG 0.486392 4_4:-56976985 Msa0689760:CDS
GCAGCTTTAGAAATACTAAG+AGG 0.493048 4_4:-56979463 Msa0689760:CDS
TCTTGAACTTCTTCACAAGT+TGG 0.493830 4_4:-56979335 Msa0689760:CDS
AAACATGCAAGCTAAGTACT+TGG 0.495926 4_4:-56977970 Msa0689760:CDS
TATCTTTCCAGAGTTTCGTC+AGG 0.497269 4_4:-56980157 Msa0689760:CDS
TCGGCTTTAGAAGGCATATC+GGG 0.497897 4_4:-56977554 Msa0689760:CDS
TGGCATTATCATATTGTGAT+CGG 0.499192 4_4:-56977202 Msa0689760:CDS
GGCAGCAAAGCTATAGCATA+CGG 0.502952 4_4:+56984263 None:intergenic
AAGTCTACGTGCTGCAAAAG+AGG 0.503094 4_4:-56983701 Msa0689760:CDS
TGAACTTCTTCACAAGTTGG+TGG 0.503711 4_4:-56979332 Msa0689760:CDS
GCCAATCAAGTACGTCAGAT+AGG 0.507056 4_4:+56977645 None:intergenic
TCGGTTACCTCCACGAATCT+AGG 0.507909 4_4:+56984242 None:intergenic
TGGCAATCTGCAAAATGAAA+TGG 0.508855 4_4:-56977913 Msa0689760:intron
GGGCGTGGTAATATTTCGGT+TGG 0.509595 4_4:-56979562 Msa0689760:CDS
GTATCACGGAGTTACTGCTT+TGG 0.509901 4_4:+56984068 None:intergenic
TCCTTGATCTGTTGAGCCGC+AGG 0.510060 4_4:-56976857 Msa0689760:CDS
GAAGAAGCCTGTTGTTTCAA+TGG 0.510917 4_4:-56985502 Msa0689760:CDS
GGATAGAATAAATGGAGCTC+AGG 0.513311 4_4:-56976832 Msa0689760:CDS
GGAAACTTATTCCTGAAGGC+AGG 0.513773 4_4:-56984328 Msa0689760:CDS
ACCTTTGTGTAATTTCAGAC+TGG 0.516556 4_4:+56979293 None:intergenic
TGTGAAGAAATACTTCGAAA+AGG 0.521444 4_4:-56979415 Msa0689760:CDS
AATTGTGGATGTAGGTGGTA+GGG 0.522536 4_4:-56984729 Msa0689760:intron
TTGTTGGTCAGAGGCACCCT+TGG 0.525914 4_4:-56984303 Msa0689760:CDS
GAACAATAGTTGTCTTTGGA+AGG 0.526784 4_4:+56980218 None:intergenic
ATTGAGAAGGCTACTGCGGA+GGG 0.528197 4_4:-56980013 Msa0689760:CDS
AAATGAAAGCAGTGACCAAA+GGG 0.529020 4_4:-56976102 Msa0689760:CDS
TTAGTAGTGCCTATTCCGTC+GGG 0.529634 4_4:-56984545 Msa0689760:CDS
ATTCTCCCCACACCAACTCA+TGG 0.529806 4_4:+56984661 None:intergenic
AGATACTCAACAATGTCCTC+AGG 0.530213 4_4:+56979265 None:intergenic
ACCTGTAACTTAGTCTCCCT+CGG 0.533888 4_4:+56976795 None:intergenic
TTTAGTAGTGCCTATTCCGT+CGG 0.534864 4_4:-56984546 Msa0689760:CDS
TTCTGAATCACGACTTCCAA+GGG 0.535554 4_4:+56984287 None:intergenic
GGTGAAAGAGTTTGGTGTAC+CGG 0.538784 4_4:-56984696 Msa0689760:CDS
TGTTGTTTCAATGGAAGTGT+TGG 0.539807 4_4:-56985493 Msa0689760:CDS
TTGATCTGTTGAGCCGCAGG+TGG 0.540467 4_4:-56976854 Msa0689760:CDS
GCGGTTATTACCAAAGCTAA+AGG 0.540504 4_4:-56985399 Msa0689760:intron
AATTATTGGTGTCAGGGGCG+TGG 0.546346 4_4:-56979577 Msa0689760:intron
GACGGAATAGGCACTACTAA+AGG 0.548113 4_4:+56984548 None:intergenic
GTCCAGTAAGAAGCAATGCT+TGG 0.549261 4_4:+56979494 None:intergenic
TATGAGTTCACCATATCAGC+TGG 0.551024 4_4:+56978011 None:intergenic
AGTGCTGCATTCTCGTCGGT+TGG 0.551147 4_4:+56980109 None:intergenic
TTGTGGATGTAGGTGGTAGG+GGG 0.553180 4_4:-56984727 Msa0689760:intron
TGTGTAAGGTTTGGAATGAT+CGG 0.553224 4_4:+56985551 None:intergenic
TGGGAGCTATGAGGAGGCTG+TGG 0.553983 4_4:-56980302 Msa0689760:CDS
GTCTTTGGAAGGATAATGGA+TGG 0.554431 4_4:+56980229 None:intergenic
ACCTGCGGCTCAACAGATCA+AGG 0.554797 4_4:+56976856 None:intergenic
TCTTGATCACTGAACAGTTA+CGG 0.555310 4_4:+56976559 None:intergenic
ACCGCTATAGTTTCCAAACT+AGG 0.558517 4_4:+56985417 None:intergenic
ACCATCACTCTTGCTACTGT+CGG 0.559526 4_4:+56976929 None:intergenic
TCAGAGGAAAGCAGTTGTGA+AGG 0.560470 4_4:-56976239 Msa0689760:CDS
TTCAAGTGCTGCATTCTCGT+CGG 0.560647 4_4:+56980105 None:intergenic
AGAACAATAGTTTGTATCAA+CGG 0.565871 4_4:+56984112 None:intergenic
AAATTGTGGATGTAGGTGGT+AGG 0.570289 4_4:-56984730 Msa0689760:intron
CTTCTGAATCACGACTTCCA+AGG 0.573584 4_4:+56984286 None:intergenic
GGGAGAGCTGCTTCTTGGAA+AGG 0.574605 4_4:-56984525 Msa0689760:intron
TCTCATTTCAAAGCTTGCTG+TGG 0.578557 4_4:+56977091 None:intergenic
AGTCTACGTGCTGCAAAAGA+GGG 0.579275 4_4:-56983700 Msa0689760:CDS
AAAAGCTCAATAGTTTGGGA+TGG 0.580220 4_4:+56978050 None:intergenic
TTCAAATGGTGCTTTGTCCG+AGG 0.583371 4_4:-56984597 Msa0689760:CDS
GAGAATTCCAGAACAAGTAT+GGG 0.584605 4_4:+56978095 None:intergenic
AATGGGAAACTTATTCCTGA+AGG 0.585662 4_4:-56984332 Msa0689760:CDS
GATGCAGCCGCTATGTGAGA+CGG 0.586279 4_4:-56978120 Msa0689760:intron
AAAATGAAAGCAGTGACCAA+AGG 0.587095 4_4:-56976103 Msa0689760:CDS
TATATGTTTGGGGATTAGAA+GGG 0.589030 4_4:-56984639 Msa0689760:CDS
TGCGGAGATTGAGGGTGCAG+AGG 0.590744 4_4:-56976976 Msa0689760:CDS
TACGGTTCAAAACTCTTACT+CGG 0.592902 4_4:-56985621 Msa0689760:CDS
ATCTCTCCGAATCTACTCGC+CGG 0.594958 4_4:-56985586 Msa0689760:CDS
CAGAGAACACATGCTATCGC+TGG 0.594960 4_4:+56976213 None:intergenic
AGGCAGGATTTGTTGGTCAG+AGG 0.601301 4_4:-56984312 Msa0689760:CDS
ACCTAGTTTGGAAACTATAG+CGG 0.601716 4_4:-56985418 Msa0689760:CDS
GTGAAGTCCATGAGTTGGTG+TGG 0.601993 4_4:-56984668 Msa0689760:CDS
GAACTCGTTCCCAATTTCAA+CGG 0.603272 4_4:-56985666 Msa0689760:CDS
ACAAGTGCAAGTCATTGCAC+CGG 0.604273 4_4:-56979363 Msa0689760:CDS
AGAAAACTTATACCCCAACT+AGG 0.606288 4_4:-56977589 Msa0689760:CDS
TGATCTGTTGAGCCGCAGGT+GGG 0.606981 4_4:-56976853 Msa0689760:CDS
TATTGAGAAGGCTACTGCGG+AGG 0.609202 4_4:-56980014 Msa0689760:CDS
CATTTATTCTATCCCACCTG+CGG 0.610718 4_4:+56976841 None:intergenic
CTCTACTATCATGCTTGATG+AGG 0.611072 4_4:-56976880 Msa0689760:CDS
TGAAGTCCATGAGTTGGTGT+GGG 0.613486 4_4:-56984667 Msa0689760:CDS
TGAAAATGGGAGCTATGAGG+AGG 0.616857 4_4:-56980308 Msa0689760:CDS
GCACGAGAGTGCTCCCGTTG+GGG 0.617314 4_4:+56976152 None:intergenic
AGAGTTTGGTGTACCGGACA+TGG 0.623876 4_4:-56984690 Msa0689760:CDS
TGCTTCTGGAAACTTTGAAG+AGG 0.624824 4_4:-56983761 Msa0689760:CDS
GAGACAATGCCAGTTCATGT+TGG 0.626423 4_4:+56977450 None:intergenic
AAATATTTGCAGAAGAAGAG+AGG 0.627160 4_4:-56980043 Msa0689760:CDS
AAGCAGCTTGCACAATGACA+AGG 0.629811 4_4:+56983738 None:intergenic
CAAAATACAGCCATTTCTAG+AGG 0.630041 4_4:-56977047 Msa0689760:CDS
ATCGAATCCATCGAATCCTA+CGG 0.634247 4_4:-56985639 Msa0689760:CDS
ATTATCCAAAGCAAGTATCA+CGG 0.634296 4_4:+56984054 None:intergenic
GTGCACGAGAGTGCTCCCGT+TGG 0.634412 4_4:+56976150 None:intergenic
CCAAGAAGCAGCTCTCCCGA+CGG 0.635711 4_4:+56984530 None:intergenic
GGACATTGTTGAGTATCTCA+AGG 0.638437 4_4:-56979260 Msa0689760:intron
GTAGATTCGGAGAGATCCAT+CGG 0.640265 4_4:+56985593 None:intergenic
TCTTCATATAAAGCATCTTG+AGG 0.647366 4_4:+56977500 None:intergenic
AAGATGAACTGTATAGTCAG+AGG 0.648837 4_4:-56976255 Msa0689760:CDS
ACCGACAGTAGCAAGAGTGA+TGG 0.649366 4_4:-56976930 Msa0689760:CDS
TACACAAAGGTTCAAGCCTG+AGG 0.651020 4_4:-56979281 Msa0689760:CDS
ACATGGTGAAGTCCATGAGT+TGG 0.651327 4_4:-56984673 Msa0689760:CDS
GTGGGGAGAATATATGTTTG+GGG 0.653335 4_4:-56984649 Msa0689760:CDS
TACAGTACCTGGGCTCCAAG+AGG 0.653562 4_4:+56984007 None:intergenic
CCGAGGATCAAAGAAAATTG+CGG 0.658383 4_4:-56976994 Msa0689760:CDS
TGATGCGGATGAATTTAATG+AGG 0.663812 4_4:-56976907 Msa0689760:CDS
CGTAGACTTGAATCTTCAGG+TGG 0.664174 4_4:+56983715 None:intergenic
AGAGAAGTTGGACATTGATG+GGG 0.668723 4_4:-56980188 Msa0689760:CDS
TGGATAAAGAGAAAGCACAT+AGG 0.673745 4_4:+56980249 None:intergenic
GATGCGGATGAATTTAATGA+GGG 0.675828 4_4:-56976906 Msa0689760:CDS
TAGCAAGAGTGATGGTGATG+CGG 0.679498 4_4:-56976922 Msa0689760:CDS
GAAGTCCATGAGTTGGTGTG+GGG 0.692506 4_4:-56984666 Msa0689760:CDS
GCCAGTCTGAAATTACACAA+AGG 0.698565 4_4:-56979294 Msa0689760:CDS
TTTGCTGCCTAGATTCGTGG+AGG 0.700668 4_4:-56984249 Msa0689760:intron
ATGGGATCCGTCTCACATAG+CGG 0.707790 4_4:+56978113 None:intergenic
GGAATAGGCACTACTAAAGG+CGG 0.715805 4_4:+56984551 None:intergenic
CATATCGGGATACAATCCAG+AGG 0.742394 4_4:-56977540 Msa0689760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTAAATTTATTTTATCTTT+TGG + chr4_4:56976704-56976723 None:intergenic 10.0%
!! TAAGACAAAAAATTATATAT+AGG - chr4_4:56979850-56979869 Msa0689760:intron 10.0%
!! AAAAAATTATATATAGGATA+CGG - chr4_4:56979856-56979875 Msa0689760:intron 10.0%
!! TACAATAAATACAATAAATA+GGG + chr4_4:56980967-56980986 None:intergenic 10.0%
!! ATACAATAAATACAATAAAT+AGG + chr4_4:56980968-56980987 None:intergenic 10.0%
!! TTTAACAAATGATTATTTAT+TGG - chr4_4:56983397-56983416 Msa0689760:intron 10.0%
!!! AATACAAAATTTTGATAACT+TGG + chr4_4:56977891-56977910 None:intergenic 15.0%
!! TACAATCAATACAATAAATA+GGG + chr4_4:56978901-56978920 None:intergenic 15.0%
!! ATACAATCAATACAATAAAT+AGG + chr4_4:56978902-56978921 None:intergenic 15.0%
!! GAATATACAGTTATATATAT+AGG + chr4_4:56978970-56978989 None:intergenic 15.0%
!! ATATGTTCATTATATTATGT+GGG + chr4_4:56978995-56979014 None:intergenic 15.0%
!! AATATGTTCATTATATTATG+TGG + chr4_4:56978996-56979015 None:intergenic 15.0%
!! AAAAATTATATATAGGATAC+GGG - chr4_4:56979857-56979876 Msa0689760:intron 15.0%
!! GAATATACAGTTATATATAT+AGG + chr4_4:56978970-56978989 None:intergenic 15.0%
!! ATATGTTCATTATATTATGT+GGG + chr4_4:56978995-56979014 None:intergenic 15.0%
!! AATATGTTCATTATATTATG+TGG + chr4_4:56978996-56979015 None:intergenic 15.0%
!!! TTGATATTTCTAAATGATTA+AGG + chr4_4:56982120-56982139 None:intergenic 15.0%
!!! AGTTATCATTTTGAAATTAT+TGG - chr4_4:56982183-56982202 Msa0689760:intron 15.0%
!!! TTCTTTTAGTTGATTATAAT+GGG - chr4_4:56982560-56982579 Msa0689760:intron 15.0%
!! GTTTATAATAAAACATTATG+AGG - chr4_4:56982954-56982973 Msa0689760:intron 15.0%
!! TATTAATCATATATAAGACA+TGG + chr4_4:56984054-56984073 None:intergenic 15.0%
!! AGATAGATATTCATAGATTA+TGG - chr4_4:56976514-56976533 Msa0689760:intron 20.0%
!! TTCATTAGAATAATCCATAA+TGG + chr4_4:56978123-56978142 None:intergenic 20.0%
!! AAGATGAACTTATAAATCAA+AGG + chr4_4:56978181-56978200 None:intergenic 20.0%
!!! GAATTACGATTTTCTTTTTT+GGG + chr4_4:56978304-56978323 None:intergenic 20.0%
!! TTGTTCATAAATTTAAAGAG+AGG - chr4_4:56978599-56978618 Msa0689760:intron 20.0%
!! ATCTATATTGAATACATTAC+TGG - chr4_4:56978687-56978706 Msa0689760:intron 20.0%
!! AGCTTCAAGTAATTTATAAA+AGG + chr4_4:56981354-56981373 None:intergenic 20.0%
!!! CATATTATGATTCGTTTTTT+TGG + chr4_4:56981696-56981715 None:intergenic 20.0%
!!! TACTTTTTTAAACCTATTGT+AGG + chr4_4:56981831-56981850 None:intergenic 20.0%
!! TAGGTTTAAAAAAGTAAACA+AGG - chr4_4:56981835-56981854 Msa0689760:intron 20.0%
!!! TTGTCAATAAAGCTTTATAT+GGG + chr4_4:56981994-56982013 None:intergenic 20.0%
!!! TTTGTCAATAAAGCTTTATA+TGG + chr4_4:56981995-56982014 None:intergenic 20.0%
!!! GTTCTTTTAGTTGATTATAA+TGG - chr4_4:56982559-56982578 Msa0689760:intron 20.0%
!! TTTCTAAATAGTTTCTCTTA+TGG + chr4_4:56982901-56982920 None:intergenic 20.0%
!! AAACTTAAATCCATACAAAA+TGG + chr4_4:56983566-56983585 None:intergenic 20.0%
!!! ACAATAATTTTTTCCTAGTT+GGG + chr4_4:56984201-56984220 None:intergenic 20.0%
!! AACTAGGAAAAAATTATTGT+CGG - chr4_4:56984201-56984220 Msa0689760:intron 20.0%
!!! ATTGTTATTCATCAGTTTAA+AGG + chr4_4:56984504-56984523 None:intergenic 20.0%
!!! ATGCCATCTATTTAATATTT+TGG - chr4_4:56985284-56985303 Msa0689760:intron 20.0%
!!! TGCCATCTATTTAATATTTT+GGG - chr4_4:56985285-56985304 Msa0689760:intron 20.0%
! CAACTTATGTCATGTTTATA+AGG + chr4_4:56976835-56976854 None:intergenic 25.0%
! TTTAGTTGAAACTGAAATTG+TGG - chr4_4:56977030-56977049 Msa0689760:CDS 25.0%
!!! TTTCATTGCTTGTTTTTGTT+AGG - chr4_4:56977355-56977374 Msa0689760:intron 25.0%
!!! TGATTTGTTGATGCATTTTT+AGG - chr4_4:56977393-56977412 Msa0689760:intron 25.0%
!! AGAACAATAGTTTGTATCAA+CGG + chr4_4:56977665-56977684 None:intergenic 25.0%
!! TTTTTGGATTCTAATGCAAA+TGG - chr4_4:56977830-56977849 Msa0689760:intron 25.0%
! TATAAGGTTATTTGCCATTA+TGG - chr4_4:56978106-56978125 Msa0689760:CDS 25.0%
!!! AAAGGTATTCAATTCAATAG+GGG + chr4_4:56978163-56978182 None:intergenic 25.0%
!!! CAAAGGTATTCAATTCAATA+GGG + chr4_4:56978164-56978183 None:intergenic 25.0%
!!! TCAAAGGTATTCAATTCAAT+AGG + chr4_4:56978165-56978184 None:intergenic 25.0%
!! GGAATTACGATTTTCTTTTT+TGG + chr4_4:56978305-56978324 None:intergenic 25.0%
!! AAGTCTTTTTATCCACTAAT+TGG + chr4_4:56978450-56978469 None:intergenic 25.0%
! GAGAGGAAAAATAAATAATG+AGG - chr4_4:56978616-56978635 Msa0689760:intron 25.0%
!! ATTAATCTTCCCTATTGATT+GGG - chr4_4:56978924-56978943 Msa0689760:intron 25.0%
! ATACAGTTATATATATAGGC+AGG + chr4_4:56978966-56978985 None:intergenic 25.0%
! GAATAAATATATCTACCTAG+TGG + chr4_4:56979215-56979234 None:intergenic 25.0%
! GTAGATATATTTATTCGATG+AGG - chr4_4:56979219-56979238 Msa0689760:intron 25.0%
! TGGATATTTAATGTTAAGGT+TGG + chr4_4:56979637-56979656 None:intergenic 25.0%
!! TTTAGAATCTAATCACACTT+GGG + chr4_4:56979704-56979723 None:intergenic 25.0%
! ACATAATCAAAATAGGGAAT+AGG + chr4_4:56980066-56980085 None:intergenic 25.0%
! GACTCAACATAATCAAAATA+GGG + chr4_4:56980072-56980091 None:intergenic 25.0%
! CAAATTCTTAAGTACGTTAA+AGG - chr4_4:56980367-56980386 Msa0689760:intron 25.0%
! ATCTGAATATCCAATGATTT+CGG + chr4_4:56980434-56980453 None:intergenic 25.0%
!! TTGGTGGAAATTTAATTTCA+TGG - chr4_4:56980512-56980531 Msa0689760:intron 25.0%
!! ATTAATCTTCCCTATTGATT+GGG - chr4_4:56978924-56978943 Msa0689760:intron 25.0%
! ATACAGTTATATATATAGGC+AGG + chr4_4:56978966-56978985 None:intergenic 25.0%
!! GACTTTAATTTCTTGAAACA+TGG + chr4_4:56981154-56981173 None:intergenic 25.0%
! ACAATCATTATCATTACTGT+GGG + chr4_4:56981307-56981326 None:intergenic 25.0%
! TACAATCATTATCATTACTG+TGG + chr4_4:56981308-56981327 None:intergenic 25.0%
! ATGATTGTAACTTTCTTTAG+CGG - chr4_4:56981319-56981338 Msa0689760:intron 25.0%
! AACGAATCATAATATGCTTA+TGG - chr4_4:56981700-56981719 Msa0689760:intron 25.0%
!!! ATTTTGAAATTATTGGTGTC+AGG - chr4_4:56982190-56982209 Msa0689760:intron 25.0%
!!! TTTTGAAATTATTGGTGTCA+GGG - chr4_4:56982191-56982210 Msa0689760:intron 25.0%
! CTATCTGATTCAATAACTAT+AGG + chr4_4:56983112-56983131 None:intergenic 25.0%
! GATAATATCAACCAACAAAT+TGG + chr4_4:56983166-56983185 None:intergenic 25.0%
! ACATTATATTCTTGTGCAAT+TGG - chr4_4:56983195-56983214 Msa0689760:intron 25.0%
! GAAAGAAAAAAAACTTCATG+TGG + chr4_4:56983224-56983243 None:intergenic 25.0%
!! CTTTCTTTTTCTTTTCTTTC+CGG - chr4_4:56983239-56983258 Msa0689760:intron 25.0%
!! AACAATTAACATGTCATTTC+CGG + chr4_4:56983261-56983280 None:intergenic 25.0%
! ACATGTTAATTGTTAGTAAG+TGG - chr4_4:56983267-56983286 Msa0689760:intron 25.0%
! CATGTTAATTGTTAGTAAGT+GGG - chr4_4:56983268-56983287 Msa0689760:intron 25.0%
! ATGTTAATTGTTAGTAAGTG+GGG - chr4_4:56983269-56983288 Msa0689760:intron 25.0%
! AATAATTCCTTCATGTGATA+AGG + chr4_4:56983314-56983333 None:intergenic 25.0%
!!! TGTTTTAGGTTTTTCATGTT+TGG - chr4_4:56983447-56983466 Msa0689760:intron 25.0%
!! TGTTCAATTTCCATTTTGTA+TGG - chr4_4:56983553-56983572 Msa0689760:intron 25.0%
!! ATTTTGTTGAGCATTTAAGT+CGG + chr4_4:56984158-56984177 None:intergenic 25.0%
! ACTTAAATGCTCAACAAAAT+TGG - chr4_4:56984158-56984177 Msa0689760:intron 25.0%
! CTTAAATGCTCAACAAAATT+GGG - chr4_4:56984159-56984178 Msa0689760:intron 25.0%
!!! CAATAATTTTTTCCTAGTTG+GGG + chr4_4:56984200-56984219 None:intergenic 25.0%
!!! GACAATAATTTTTTCCTAGT+TGG + chr4_4:56984202-56984221 None:intergenic 25.0%
!!! TTCATTTTTTTGTACAAGTG+TGG - chr4_4:56984458-56984477 Msa0689760:intron 25.0%
!!! TTGCTAGATTTTTTTAGAGA+TGG + chr4_4:56984619-56984638 None:intergenic 25.0%
! AATAGATTTGCATAAGCAAT+AGG + chr4_4:56984648-56984667 None:intergenic 25.0%
!!! CTTAGGAATTTTTTCATGTT+AGG - chr4_4:56985072-56985091 Msa0689760:intron 25.0%
!! AATAGATGGCATTTTCATTA+CGG + chr4_4:56985276-56985295 None:intergenic 25.0%
!! GCCATCTATTTAATATTTTG+GGG - chr4_4:56985286-56985305 Msa0689760:intron 25.0%
!!! CCATCTATTTAATATTTTGG+GGG - chr4_4:56985287-56985306 Msa0689760:intron 25.0%
GTTTCATAGATTACCTAGTT+TGG - chr4_4:56976344-56976363 Msa0689760:intron 30.0%
AGATTATGGATCATAAACAC+CGG - chr4_4:56976528-56976547 Msa0689760:intron 30.0%
TCTATCTTACAGATTACTAC+AGG + chr4_4:56976582-56976601 None:intergenic 30.0%
AATGCTTTCATAAGCTATCT+TGG - chr4_4:56976745-56976764 Msa0689760:intron 30.0%
!! TAAGCTGAAAGCACTTTATA+AGG - chr4_4:56976782-56976801 Msa0689760:intron 30.0%
! ATGACATAAGTTGTTTCCAT+AGG - chr4_4:56976842-56976861 Msa0689760:CDS 30.0%
TCAAATAAGCTAATCCAAAC+AGG - chr4_4:56976907-56976926 Msa0689760:CDS 30.0%
ATATATGTTTGGGGATTAGA+AGG - chr4_4:56977134-56977153 Msa0689760:CDS 30.0%
TATATGTTTGGGGATTAGAA+GGG - chr4_4:56977135-56977154 Msa0689760:CDS 30.0%
! GTGATTTTGAATGCTTCAAA+TGG - chr4_4:56977163-56977182 Msa0689760:CDS 30.0%
!! ATGCATTTTTAGGAGAACAT+TGG - chr4_4:56977403-56977422 Msa0689760:intron 30.0%
!! TGCATTTTTAGGAGAACATT+GGG - chr4_4:56977404-56977423 Msa0689760:intron 30.0%
!!! GTTTTTTCTTAATGTGAGAG+AGG - chr4_4:56977576-56977595 Msa0689760:CDS 30.0%
GTGGATCTATGTTCTTTATA+TGG - chr4_4:56977601-56977620 Msa0689760:CDS 30.0%
! ATAGTTTGTATCAACGGATA+AGG + chr4_4:56977659-56977678 None:intergenic 30.0%
ATTATCCAAAGCAAGTATCA+CGG + chr4_4:56977723-56977742 None:intergenic 30.0%
! GCTTTGGATAATTCTATTCA+AGG - chr4_4:56977731-56977750 Msa0689760:intron 30.0%
TAACAGTATATACAGTACCT+GGG + chr4_4:56977780-56977799 None:intergenic 30.0%
TTAACAGTATATACAGTACC+TGG + chr4_4:56977781-56977800 None:intergenic 30.0%
TTTGTATTTGTGCATATCGT+TGG - chr4_4:56977903-56977922 Msa0689760:intron 30.0%
!!! TCGTTGGTTATTTTGAAGTT+AGG - chr4_4:56977919-56977938 Msa0689760:CDS 30.0%
!!! CGTTGGTTATTTTGAAGTTA+GGG - chr4_4:56977920-56977939 Msa0689760:CDS 30.0%
AAGAGGGATCAATTCATATA+AGG - chr4_4:56978090-56978109 Msa0689760:CDS 30.0%
! GTTTATATTGACTGTTGATG+TGG - chr4_4:56978242-56978261 Msa0689760:intron 30.0%
! ATTCCTGTTATGTTGATTGT+AGG - chr4_4:56978320-56978339 Msa0689760:intron 30.0%
AGCTAAAGTAAACCTTTACA+TGG + chr4_4:56978350-56978369 None:intergenic 30.0%
ATAGTAGTATTAGCTGAAGT+TGG - chr4_4:56978379-56978398 Msa0689760:intron 30.0%
TAGTAGTATTAGCTGAAGTT+GGG - chr4_4:56978380-56978399 Msa0689760:intron 30.0%
TCTTTACAATAGCCAATTAG+TGG - chr4_4:56978435-56978454 Msa0689760:intron 30.0%
AACTATCTCAAACTATATGC+TGG - chr4_4:56978558-56978577 Msa0689760:intron 30.0%
ACTATCTCAAACTATATGCT+GGG - chr4_4:56978559-56978578 Msa0689760:intron 30.0%
GATTAATCTTCCCTATTGAT+TGG - chr4_4:56978923-56978942 Msa0689760:intron 30.0%
! TTAATCTTCCCTATTGATTG+GGG - chr4_4:56978925-56978944 Msa0689760:intron 30.0%
TAGTTAATCCCCAATCAATA+GGG + chr4_4:56978936-56978955 None:intergenic 30.0%
!! TCGTTATTTTCTTGGTATTG+AGG + chr4_4:56979089-56979108 None:intergenic 30.0%
ATACCAAGAAAATAACGAAG+AGG - chr4_4:56979091-56979110 Msa0689760:intron 30.0%
ATTTCAAAACTTCCAGACTA+AGG + chr4_4:56979125-56979144 None:intergenic 30.0%
! ATTACAGGTGATGATAATGA+GGG + chr4_4:56979172-56979191 None:intergenic 30.0%
AAATTACGTAAGTCTTTGCA+TGG + chr4_4:56979349-56979368 None:intergenic 30.0%
! TTTTTCTCCAGTTGCAAAAA+TGG + chr4_4:56979530-56979549 None:intergenic 30.0%
TATCACTATAATCTTGACCA+TGG - chr4_4:56979551-56979570 Msa0689760:CDS 30.0%
CAGGTGGATATTTAATGTTA+AGG + chr4_4:56979641-56979660 None:intergenic 30.0%
!! CTTTAGAATCTAATCACACT+TGG + chr4_4:56979705-56979724 None:intergenic 30.0%
AATACTTCCTGAATTGTCTT+AGG - chr4_4:56979769-56979788 Msa0689760:intron 30.0%
TTCTATTCCTAAGACAATTC+AGG + chr4_4:56979779-56979798 None:intergenic 30.0%
! TATATATAGGATACGGGTTA+CGG - chr4_4:56979863-56979882 Msa0689760:intron 30.0%
GGACTCAACATAATCAAAAT+AGG + chr4_4:56980073-56980092 None:intergenic 30.0%
TTTGAATAACTGCATTCCAA+TGG + chr4_4:56980351-56980370 None:intergenic 30.0%
! TCTGGTTATTGTGTTTTCTT+TGG - chr4_4:56980493-56980512 Msa0689760:intron 30.0%
!! GAACTTCATTTTTGTGAGAT+TGG - chr4_4:56980640-56980659 Msa0689760:intron 30.0%
ATCTTTACTAAATCTCTACG+AGG - chr4_4:56980832-56980851 Msa0689760:intron 30.0%
AACTTACATATGTGACAAGA+TGG - chr4_4:56980864-56980883 Msa0689760:intron 30.0%
GATTAATCTTCCCTATTGAT+TGG - chr4_4:56978923-56978942 Msa0689760:intron 30.0%
! TTAATCTTCCCTATTGATTG+GGG - chr4_4:56978925-56978944 Msa0689760:intron 30.0%
TAGTTAATCCCCAATCAATA+GGG + chr4_4:56978936-56978955 None:intergenic 30.0%
CATCACTTAACCCATATTAA+TGG + chr4_4:56981284-56981303 None:intergenic 30.0%
! TTTGCTTTGCATTTTTCTGA+AGG - chr4_4:56981391-56981410 Msa0689760:intron 30.0%
! CCCATTTTCAAAAAGATAGT+GGG + chr4_4:56981456-56981475 None:intergenic 30.0%
!! CCCACTATCTTTTTGAAAAT+GGG - chr4_4:56981453-56981472 Msa0689760:intron 30.0%
! TCCCATTTTCAAAAAGATAG+TGG + chr4_4:56981457-56981476 None:intergenic 30.0%
TCATGAACAATAGTTGTCTT+TGG + chr4_4:56981563-56981582 None:intergenic 30.0%
AAATATTTGCAGAAGAAGAG+AGG - chr4_4:56981731-56981750 Msa0689760:intron 30.0%
! GAGAGGTAATTTTATTGAGA+AGG - chr4_4:56981748-56981767 Msa0689760:intron 30.0%
ATAACTATGCATCCTACAAT+AGG - chr4_4:56981816-56981835 Msa0689760:intron 30.0%
CTTTATTGACAAATACACAC+AGG - chr4_4:56982002-56982021 Msa0689760:intron 30.0%
TAGTACATATGCAGAATGAA+TGG - chr4_4:56982064-56982083 Msa0689760:intron 30.0%
!! TTTGAAATTATTGGTGTCAG+GGG - chr4_4:56982192-56982211 Msa0689760:intron 30.0%
TGTGAAGAAATACTTCGAAA+AGG - chr4_4:56982359-56982378 Msa0689760:intron 30.0%
ATCAGAAATGACAACATTAG+AGG - chr4_4:56982722-56982741 Msa0689760:intron 30.0%
TCAGAAATGACAACATTAGA+GGG - chr4_4:56982723-56982742 Msa0689760:intron 30.0%
AAGATCTAGAGATTAATGAG+TGG - chr4_4:56982919-56982938 Msa0689760:intron 30.0%
AGATCTAGAGATTAATGAGT+GGG - chr4_4:56982920-56982939 Msa0689760:intron 30.0%
TATAGACTAAAGAACTGTCT+CGG - chr4_4:56983046-56983065 Msa0689760:intron 30.0%
TGTTAATTGTTAGTAAGTGG+GGG - chr4_4:56983270-56983289 Msa0689760:intron 30.0%
TATGACATTGATATGCTAAC+AGG - chr4_4:56983421-56983440 Msa0689760:intron 30.0%
! ATGCTAACAGGAATTGTTTT+AGG - chr4_4:56983433-56983452 Msa0689760:intron 30.0%
CAGAAAAAGCTCAATAGTTT+GGG + chr4_4:56983731-56983750 None:intergenic 30.0%
ACAGAAAAAGCTCAATAGTT+TGG + chr4_4:56983732-56983751 None:intergenic 30.0%
! ACCTCTTGCATCTTATTTAA+AGG - chr4_4:56983889-56983908 Msa0689760:intron 30.0%
! ATCAGTTTTCCGTTTTCTTT+TGG - chr4_4:56983925-56983944 Msa0689760:intron 30.0%
!! AAATTATTGTCGGCTTTAGA+AGG - chr4_4:56984211-56984230 Msa0689760:intron 30.0%
! TCTTCATATAAAGCATCTTG+AGG + chr4_4:56984277-56984296 None:intergenic 30.0%
AAAAATGAACCAACATGAAC+TGG - chr4_4:56984315-56984334 Msa0689760:CDS 30.0%
ATTGTCTCTGTATGTTCATA+AGG - chr4_4:56984339-56984358 Msa0689760:CDS 30.0%
ATATCATCTGTTTACTCTGA+TGG - chr4_4:56984387-56984406 Msa0689760:intron 30.0%
TATCATCTGTTTACTCTGAT+GGG - chr4_4:56984388-56984407 Msa0689760:intron 30.0%
AAATGAACTCAAGTGCATTT+GGG + chr4_4:56984445-56984464 None:intergenic 30.0%
AAAATGAACTCAAGTGCATT+TGG + chr4_4:56984446-56984465 None:intergenic 30.0%
! CAATATGATAATGCCAATTC+TGG + chr4_4:56984568-56984587 None:intergenic 30.0%
TGGCATTATCATATTGTGAT+CGG - chr4_4:56984572-56984591 Msa0689760:CDS 30.0%
! TAGAAATGGCTGTATTTTGT+GGG + chr4_4:56984726-56984745 None:intergenic 30.0%
CACCATCTGTAAAAAGTAAA+GGG - chr4_4:56984755-56984774 Msa0689760:intron 30.0%
ACCATCTGTAAAAAGTAAAG+GGG - chr4_4:56984756-56984775 Msa0689760:intron 30.0%
!! CTGGTCTAACTTATTTTCTT+AGG - chr4_4:56985055-56985074 Msa0689760:intron 30.0%
AGGATTTGCAATCATTTCTT+GGG - chr4_4:56985163-56985182 Msa0689760:intron 30.0%
! TCACTAGATTTTCTCAAAAG+AGG + chr4_4:56985189-56985208 None:intergenic 30.0%
! ATAGATGGCATTTTCATTAC+GGG + chr4_4:56985275-56985294 None:intergenic 30.0%
CCCCCAAAATATTAAATAGA+TGG + chr4_4:56985290-56985309 None:intergenic 30.0%
!!! TACTTGTTATTTTCGAGTAC+AGG - chr4_4:56985375-56985394 Msa0689760:intron 30.0%
TACGGTTCAAAACTCTTACT+CGG - chr4_4:56976153-56976172 Msa0689760:CDS 35.0%
! TGTGTAAGGTTTGGAATGAT+CGG + chr4_4:56976226-56976245 None:intergenic 35.0%
AACACTTCCATTGAAACAAC+AGG + chr4_4:56976282-56976301 None:intergenic 35.0%
!! TGTTGTTTCAATGGAAGTGT+TGG - chr4_4:56976281-56976300 Msa0689760:CDS 35.0%
ACCTAGTTTGGAAACTATAG+CGG - chr4_4:56976356-56976375 Msa0689760:intron 35.0%
!! GTTGGCATTTTTAGACATGA+TGG - chr4_4:56976459-56976478 Msa0689760:intron 35.0%
AGACTGTTTGAAAGAACCTA+TGG + chr4_4:56976861-56976880 None:intergenic 35.0%
CAGTCTCACAAAACATAAGT+AGG - chr4_4:56976875-56976894 Msa0689760:CDS 35.0%
CTTCTGCGATACACTATTTA+GGG + chr4_4:56976933-56976952 None:intergenic 35.0%
TCTTCTGCGATACACTATTT+AGG + chr4_4:56976934-56976953 None:intergenic 35.0%
GAAACTGAAATTGTGGATGT+AGG - chr4_4:56977037-56977056 Msa0689760:CDS 35.0%
TGTGGGGAGAATATATGTTT+GGG - chr4_4:56977124-56977143 Msa0689760:CDS 35.0%
!!! GCTTGTTTTTGTTAGGTTAG+AGG - chr4_4:56977362-56977381 Msa0689760:intron 35.0%
!! GCATTTTTAGGAGAACATTG+GGG - chr4_4:56977405-56977424 Msa0689760:intron 35.0%
AATGGGAAACTTATTCCTGA+AGG - chr4_4:56977442-56977461 Msa0689760:CDS 35.0%
!!! CTTTTTTTCTTCCCAACAGT+CGG + chr4_4:56977554-56977573 None:intergenic 35.0%
ACTGTTGGGAAGAAAAAAAG+TGG - chr4_4:56977554-56977573 Msa0689760:CDS 35.0%
AGATCGAATCTGCAAAACAA+AGG + chr4_4:56977627-56977646 None:intergenic 35.0%
TTCTATTCAAGGTCTCTTTC+CGG - chr4_4:56977742-56977761 Msa0689760:intron 35.0%
!!! TTTGCCACAGCTCTTATTTT+TGG - chr4_4:56977814-56977833 Msa0689760:intron 35.0%
GAATCCAAAAATAAGAGCTG+TGG + chr4_4:56977821-56977840 None:intergenic 35.0%
! TATGCTGGGCATAATCATTT+TGG - chr4_4:56978573-56978592 Msa0689760:intron 35.0%
CTAGTTAATCCCCAATCAAT+AGG + chr4_4:56978937-56978956 None:intergenic 35.0%
! CTATTGATTGGGGATTAACT+AGG - chr4_4:56978935-56978954 Msa0689760:intron 35.0%
! GATTACAGGTGATGATAATG+AGG + chr4_4:56979173-56979192 None:intergenic 35.0%
!! GTTGATGACATTGTGATTAC+AGG + chr4_4:56979187-56979206 None:intergenic 35.0%
TGTCATCAACATAAACCACT+AGG - chr4_4:56979197-56979216 Msa0689760:intron 35.0%
GTAAAGTCCTTCAACAGTTT+GGG + chr4_4:56979288-56979307 None:intergenic 35.0%
AGTAAAGTCCTTCAACAGTT+TGG + chr4_4:56979289-56979308 None:intergenic 35.0%
ATGGCTTAAAACAATCTCCT+CGG + chr4_4:56979330-56979349 None:intergenic 35.0%
ATCAAGAATGCATTCTTGCA+TGG + chr4_4:56979445-56979464 None:intergenic 35.0%
AGCTGACATTTCATCAAGTA+TGG - chr4_4:56979723-56979742 Msa0689760:intron 35.0%
! TGCAGAAACAAAAGCACAAT+AGG - chr4_4:56979810-56979829 Msa0689760:intron 35.0%
! AGAAACAAAAGCACAATAGG+TGG - chr4_4:56979813-56979832 Msa0689760:intron 35.0%
! GAAACAAAAGCACAATAGGT+GGG - chr4_4:56979814-56979833 Msa0689760:intron 35.0%
! ATATATAGGATACGGGTTAC+GGG - chr4_4:56979864-56979883 Msa0689760:intron 35.0%
ATCACTTATGAGAGAAGGTT+TGG + chr4_4:56979991-56980010 None:intergenic 35.0%
GCATTTGAATTGGCAAAGTA+TGG + chr4_4:56980015-56980034 None:intergenic 35.0%
! GTACCAGATACGACATATTT+TGG - chr4_4:56980120-56980139 Msa0689760:CDS 35.0%
TTAGGAAGAAGCTTCACATT+AGG + chr4_4:56980193-56980212 None:intergenic 35.0%
TATTTGCCTGGATCAGTATA+GGG + chr4_4:56980226-56980245 None:intergenic 35.0%
TAGATTATCTCACCATGACT+CGG - chr4_4:56980266-56980285 Msa0689760:CDS 35.0%
CTAACTGGAAAAGATATGTC+AGG + chr4_4:56980292-56980311 None:intergenic 35.0%
! AACTGACTTACTACACTAAC+TGG + chr4_4:56980307-56980326 None:intergenic 35.0%
TTGGATATTCAGATGCTGAT+TGG - chr4_4:56980440-56980459 Msa0689760:intron 35.0%
! TGGATATTCAGATGCTGATT+GGG - chr4_4:56980441-56980460 Msa0689760:intron 35.0%
! GGTTATTGTGTTTTCTTTGG+TGG - chr4_4:56980496-56980515 Msa0689760:intron 35.0%
! ATGCCACATGTGAACTTTTA+TGG - chr4_4:56980599-56980618 Msa0689760:intron 35.0%
CAACCATAAAAGTTCACATG+TGG + chr4_4:56980605-56980624 None:intergenic 35.0%
! ATGGTTGAAGCATTTACTTC+AGG - chr4_4:56980618-56980637 Msa0689760:intron 35.0%
!! TTTTTGTGAGATTGGTCCAA+TGG - chr4_4:56980648-56980667 Msa0689760:intron 35.0%
TTATCACACACAAGTTCCAT+TGG + chr4_4:56980667-56980686 None:intergenic 35.0%
CTTAGAGAGAAGATTATCAC+CGG - chr4_4:56980763-56980782 Msa0689760:intron 35.0%
TTGATCCTTGGAATTGACAA+AGG + chr4_4:56980803-56980822 None:intergenic 35.0%
TCACATATGTAAGTTATCCG+AGG + chr4_4:56980859-56980878 None:intergenic 35.0%
CTAGTTAATCCCCAATCAAT+AGG + chr4_4:56978937-56978956 None:intergenic 35.0%
! CTATTGATTGGGGATTAACT+AGG - chr4_4:56978935-56978954 Msa0689760:intron 35.0%
!! GCCCACTATCTTTTTGAAAA+TGG - chr4_4:56981452-56981471 Msa0689760:intron 35.0%
!! TTTTGAAAATGGGAGCTATG+AGG - chr4_4:56981463-56981482 Msa0689760:intron 35.0%
! TGGATAAAGAGAAAGCACAT+AGG + chr4_4:56981528-56981547 None:intergenic 35.0%
! AGTTGTCTTTGGAAGGATAA+TGG + chr4_4:56981552-56981571 None:intergenic 35.0%
GAACAATAGTTGTCTTTGGA+AGG + chr4_4:56981559-56981578 None:intergenic 35.0%
! TTTTATTGAGAAGGCTACTG+CGG - chr4_4:56981757-56981776 Msa0689760:intron 35.0%
!!! GAAGTTGTTTTAGATGCAGT+TGG - chr4_4:56981791-56981810 Msa0689760:intron 35.0%
TAATCATTGTCATCGCACAT+TGG + chr4_4:56981905-56981924 None:intergenic 35.0%
ATGTGCGATGACAATGATTA+TGG - chr4_4:56981905-56981924 Msa0689760:intron 35.0%
TGTGCGATGACAATGATTAT+GGG - chr4_4:56981906-56981925 Msa0689760:intron 35.0%
AACTTGCAACTTATGCCTTT+CGG - chr4_4:56981941-56981960 Msa0689760:intron 35.0%
!! GCAGCTTTAGAAATACTAAG+AGG - chr4_4:56982311-56982330 Msa0689760:intron 35.0%
TCTTGAACTTCTTCACAAGT+TGG - chr4_4:56982439-56982458 Msa0689760:intron 35.0%
ACCTTTGTGTAATTTCAGAC+TGG + chr4_4:56982484-56982503 None:intergenic 35.0%
!! TGATTATAATGGGCTGTTAC+CGG - chr4_4:56982570-56982589 Msa0689760:intron 35.0%
CACTTATTCTATTCTCGTGT+TGG + chr4_4:56982649-56982668 None:intergenic 35.0%
CGAGAATAGAATAAGTGTAG+TGG - chr4_4:56982652-56982671 Msa0689760:intron 35.0%
CAGAAATGACAACATTAGAG+GGG - chr4_4:56982724-56982743 Msa0689760:intron 35.0%
AGCAACCTATAGTAGAAAAG+TGG - chr4_4:56982762-56982781 Msa0689760:intron 35.0%
AACCTATAGTAGAAAAGTGG+TGG - chr4_4:56982765-56982784 Msa0689760:intron 35.0%
!! TTCCACCACTTTTCTACTAT+AGG + chr4_4:56982770-56982789 None:intergenic 35.0%
! TAGTAGAAAAGTGGTGGAAA+CGG - chr4_4:56982771-56982790 Msa0689760:intron 35.0%
GACATGTAGATTCTGTAGTA+AGG - chr4_4:56982822-56982841 Msa0689760:intron 35.0%
TAATGAGTGGGATCGAAATA+TGG - chr4_4:56982932-56982951 Msa0689760:intron 35.0%
GTTAATTGTTAGTAAGTGGG+GGG - chr4_4:56983271-56983290 Msa0689760:intron 35.0%
TCATGTGATAAGGAGGTTAT+GGG + chr4_4:56983304-56983323 None:intergenic 35.0%
TTCATGTGATAAGGAGGTTA+TGG + chr4_4:56983305-56983324 None:intergenic 35.0%
ATAACCTCCTTATCACATGA+AGG - chr4_4:56983304-56983323 Msa0689760:intron 35.0%
AATTCCTTCATGTGATAAGG+AGG + chr4_4:56983311-56983330 None:intergenic 35.0%
GTTGAAGTTTATGAGTCTTC+TGG + chr4_4:56983590-56983609 None:intergenic 35.0%
GAGAATTCCAGAACAAGTAT+GGG + chr4_4:56983682-56983701 None:intergenic 35.0%
TGAGAATTCCAGAACAAGTA+TGG + chr4_4:56983683-56983702 None:intergenic 35.0%
AAAAGCTCAATAGTTTGGGA+TGG + chr4_4:56983727-56983746 None:intergenic 35.0%
!! ACTATTGAGCTTTTTCTGTC+TGG - chr4_4:56983733-56983752 Msa0689760:CDS 35.0%
TGGAAATATACCAGCTGATA+TGG - chr4_4:56983753-56983772 Msa0689760:CDS 35.0%
!! AAGTACTTAGCTTGCATGTT+TGG + chr4_4:56983805-56983824 None:intergenic 35.0%
AAACATGCAAGCTAAGTACT+TGG - chr4_4:56983804-56983823 Msa0689760:intron 35.0%
ATGAATGAGAATGCCATATC+TGG - chr4_4:56983841-56983860 Msa0689760:intron 35.0%
! ATTTTGCAGATTGCCAGATA+TGG + chr4_4:56983857-56983876 None:intergenic 35.0%
TGGCAATCTGCAAAATGAAA+TGG - chr4_4:56983861-56983880 Msa0689760:intron 35.0%
ATCTGCAAAATGAAATGGTG+AGG - chr4_4:56983866-56983885 Msa0689760:intron 35.0%
GCCTTTAAATAAGATGCAAG+AGG + chr4_4:56983893-56983912 None:intergenic 35.0%
!! TTTCCGTTTTCTTTTGGTTG+TGG - chr4_4:56983931-56983950 Msa0689760:intron 35.0%
CTTCCACAACCAAAAGAAAA+CGG + chr4_4:56983937-56983956 None:intergenic 35.0%
!! AAGTTTTGTAAAAGCTCAGC+TGG - chr4_4:56983993-56984012 Msa0689760:intron 35.0%
CTTACAGTAATCTGCAATGT+AGG - chr4_4:56984096-56984115 Msa0689760:CDS 35.0%
AGAAAACTTATACCCCAACT+AGG - chr4_4:56984185-56984204 Msa0689760:intron 35.0%
ATCATCTGTTTACTCTGATG+GGG - chr4_4:56984389-56984408 Msa0689760:intron 35.0%
ATTCATCAGTTTAAAGGCCA+TGG + chr4_4:56984498-56984517 None:intergenic 35.0%
GGCATTATCATATTGTGATC+GGG - chr4_4:56984573-56984592 Msa0689760:CDS 35.0%
! AGAAATGGCTGTATTTTGTG+GGG + chr4_4:56984725-56984744 None:intergenic 35.0%
! CTAGAAATGGCTGTATTTTG+TGG + chr4_4:56984727-56984746 None:intergenic 35.0%
! CAAAATACAGCCATTTCTAG+AGG - chr4_4:56984727-56984746 Msa0689760:intron 35.0%
GCACCATCTGTAAAAAGTAA+AGG - chr4_4:56984754-56984773 Msa0689760:intron 35.0%
CCATCTGTAAAAAGTAAAGG+GGG - chr4_4:56984757-56984776 Msa0689760:intron 35.0%
AAAGAAAATTGCGGAGATTG+AGG - chr4_4:56984789-56984808 Msa0689760:intron 35.0%
AAGAAAATTGCGGAGATTGA+GGG - chr4_4:56984790-56984809 Msa0689760:intron 35.0%
TGATGCGGATGAATTTAATG+AGG - chr4_4:56984867-56984886 Msa0689760:intron 35.0%
GATGCGGATGAATTTAATGA+GGG - chr4_4:56984868-56984887 Msa0689760:intron 35.0%
TAGCTGCATCATTACGAAAA+AGG - chr4_4:56985014-56985033 Msa0689760:intron 35.0%
!!! GACACGTCAACTATTTTTAC+TGG - chr4_4:56985036-56985055 Msa0689760:intron 35.0%
CAGGATTTGCAATCATTTCT+TGG - chr4_4:56985162-56985181 Msa0689760:intron 35.0%
TCTTGATCACTGAACAGTTA+CGG + chr4_4:56985218-56985237 None:intergenic 35.0%
AATACTAGTTAGCTCCTGAA+TGG - chr4_4:56985336-56985355 Msa0689760:intron 35.0%
TTTGTACAGTGAATCCATTC+AGG + chr4_4:56985353-56985372 None:intergenic 35.0%
TCTCAATATGTATGTGTGTG+TGG + chr4_4:56985440-56985459 None:intergenic 35.0%
! TAGCAAGAGCATGATTCAAT+TGG - chr4_4:56985482-56985501 Msa0689760:CDS 35.0%
!!! TGATTCAATTGGTTTTGCAC+AGG - chr4_4:56985493-56985512 Msa0689760:CDS 35.0%
AAGATGAACTGTATAGTCAG+AGG - chr4_4:56985519-56985538 Msa0689760:CDS 35.0%
! CACTAGTCCCTATTTTCTTT+CGG + chr4_4:56985589-56985608 None:intergenic 35.0%
AAAATGAAAGCAGTGACCAA+AGG - chr4_4:56985671-56985690 Msa0689760:CDS 35.0%
AAATGAAAGCAGTGACCAAA+GGG - chr4_4:56985672-56985691 Msa0689760:CDS 35.0%
GAACTCGTTCCCAATTTCAA+CGG - chr4_4:56976108-56976127 Msa0689760:CDS 40.0%
TCGATCTTGCCGTTGAAATT+GGG + chr4_4:56976120-56976139 None:intergenic 40.0%
TTCGATCTTGCCGTTGAAAT+TGG + chr4_4:56976121-56976140 None:intergenic 40.0%
ATCGAATCCATCGAATCCTA+CGG - chr4_4:56976135-56976154 Msa0689760:CDS 40.0%
! TTTTGAACCGTAGGATTCGA+TGG + chr4_4:56976145-56976164 None:intergenic 40.0%
!!! GAGTAAGAGTTTTGAACCGT+AGG + chr4_4:56976154-56976173 None:intergenic 40.0%
TGATCGGAGAATTCTGTTTC+CGG + chr4_4:56976210-56976229 None:intergenic 40.0%
AGATTCTTCTCGAGTGTGTA+AGG + chr4_4:56976240-56976259 None:intergenic 40.0%
!! GAAGAAGCCTGTTGTTTCAA+TGG - chr4_4:56976272-56976291 Msa0689760:CDS 40.0%
ACCGCTATAGTTTCCAAACT+AGG + chr4_4:56976360-56976379 None:intergenic 40.0%
GCGGTTATTACCAAAGCTAA+AGG - chr4_4:56976375-56976394 Msa0689760:intron 40.0%
! CACATTAGCACCTTTAGCTT+TGG + chr4_4:56976388-56976407 None:intergenic 40.0%
!! AAGGTGCTAATGTGTTTTGC+TGG - chr4_4:56976394-56976413 Msa0689760:intron 40.0%
! AGGTGCTAATGTGTTTTGCT+GGG - chr4_4:56976395-56976414 Msa0689760:intron 40.0%
! ATGTGTTTTGCTGGGATGAT+CGG - chr4_4:56976403-56976422 Msa0689760:intron 40.0%
! TACACTATTTAGGGCCTGTT+TGG + chr4_4:56976924-56976943 None:intergenic 40.0%
ACTGAAATTGTGGATGTAGG+TGG - chr4_4:56977040-56977059 Msa0689760:CDS 40.0%
AAATTGTGGATGTAGGTGGT+AGG - chr4_4:56977044-56977063 Msa0689760:CDS 40.0%
AATTGTGGATGTAGGTGGTA+GGG - chr4_4:56977045-56977064 Msa0689760:CDS 40.0%
TTTGTGGAGGTGAAAGAGTT+TGG - chr4_4:56977070-56977089 Msa0689760:CDS 40.0%
GTGTGGGGAGAATATATGTT+TGG - chr4_4:56977123-56977142 Msa0689760:CDS 40.0%
GTGGGGAGAATATATGTTTG+GGG - chr4_4:56977125-56977144 Msa0689760:CDS 40.0%
! TTGTCCGAGGTTTTTACTTC+TGG - chr4_4:56977190-56977209 Msa0689760:CDS 40.0%
! TGTCCGAGGTTTTTACTTCT+GGG - chr4_4:56977191-56977210 Msa0689760:CDS 40.0%
TCTCCCAGAAGTAAAAACCT+CGG + chr4_4:56977197-56977216 None:intergenic 40.0%
TTTAGTAGTGCCTATTCCGT+CGG - chr4_4:56977228-56977247 Msa0689760:intron 40.0%
GGGTCTTTGTGGATCAAAAT+GGG - chr4_4:56977425-56977444 Msa0689760:intron 40.0%
TTCTGAATCACGACTTCCAA+GGG + chr4_4:56977490-56977509 None:intergenic 40.0%
TCTTAATGTGAGAGAGGTTG+TGG - chr4_4:56977582-56977601 Msa0689760:CDS 40.0%
TAACTCCGTGATACTTGCTT+TGG - chr4_4:56977715-56977734 Msa0689760:intron 40.0%
ATTGTCCAACTAACTGCTTC+TGG - chr4_4:56977999-56978018 Msa0689760:CDS 40.0%
AGTTTCCAGAAGCAGTTAGT+TGG + chr4_4:56978007-56978026 None:intergenic 40.0%
! TGCTTCTGGAAACTTTGAAG+AGG - chr4_4:56978013-56978032 Msa0689760:CDS 40.0%
CCACCTACAATCAACATAAC+AGG + chr4_4:56978326-56978345 None:intergenic 40.0%
! CCTGTTATGTTGATTGTAGG+TGG - chr4_4:56978323-56978342 Msa0689760:intron 40.0%
ATTGTAGGTGGTCCATGTAA+AGG - chr4_4:56978335-56978354 Msa0689760:intron 40.0%
CACATCATCTAACTAGAGTG+TGG - chr4_4:56978498-56978517 Msa0689760:intron 40.0%
TTGATTGGGGATTAACTAGG+AGG - chr4_4:56978938-56978957 Msa0689760:intron 40.0%
! CAGGTATTGCTATCTCTCAA+AGG + chr4_4:56979051-56979070 None:intergenic 40.0%
!! GGTCCTCTTCGTTATTTTCT+TGG + chr4_4:56979097-56979116 None:intergenic 40.0%
AACTTCCAGACTAAGGACTT+GGG + chr4_4:56979118-56979137 None:intergenic 40.0%
AAACTTCCAGACTAAGGACT+TGG + chr4_4:56979119-56979138 None:intergenic 40.0%
TGGCTTAAAACAATCTCCTC+GGG + chr4_4:56979329-56979348 None:intergenic 40.0%
CTTGGAGGAAGAGATTTACA+TGG + chr4_4:56979419-56979438 None:intergenic 40.0%
!!! ACGTTGGTCTCTTTTTCAGT+TGG + chr4_4:56979470-56979489 None:intergenic 40.0%
!!! ACAGATGCCATTTTTGCAAC+TGG - chr4_4:56979520-56979539 Msa0689760:CDS 40.0%
AAGGGATATACTCAAGTCCA+TGG + chr4_4:56979571-56979590 None:intergenic 40.0%
! AATCTATTGTTGGTTGCAGG+TGG + chr4_4:56979657-56979676 None:intergenic 40.0%
! GGAAATCTATTGTTGGTTGC+AGG + chr4_4:56979660-56979679 None:intergenic 40.0%
! CCTTCTGGGAAATCTATTGT+TGG + chr4_4:56979667-56979686 None:intergenic 40.0%
CCAACAATAGATTTCCCAGA+AGG - chr4_4:56979664-56979683 Msa0689760:intron 40.0%
ATAGATTTCCCAGAAGGAAG+TGG - chr4_4:56979670-56979689 Msa0689760:intron 40.0%
AATAGGTGGGAGATAAACGA+TGG - chr4_4:56979827-56979846 Msa0689760:intron 40.0%
ATGGCATCACTTATGAGAGA+AGG + chr4_4:56979996-56980015 None:intergenic 40.0%
TGCCAATTCAAATGCTCCTT+CGG - chr4_4:56980020-56980039 Msa0689760:CDS 40.0%
!! AACCGAAGGAGCATTTGAAT+TGG + chr4_4:56980025-56980044 None:intergenic 40.0%
TGGGACAGAAGATATATGAG+TGG + chr4_4:56980094-56980113 None:intergenic 40.0%
CCTCCAAAATATGTCGTATC+TGG + chr4_4:56980126-56980145 None:intergenic 40.0%
!! CCAGATACGACATATTTTGG+AGG - chr4_4:56980123-56980142 Msa0689760:CDS 40.0%
AGCTTCACATTAGGATCCAT+AGG + chr4_4:56980184-56980203 None:intergenic 40.0%
TGTGAAGCTTCTTCCTAATC+AGG - chr4_4:56980195-56980214 Msa0689760:CDS 40.0%
GTGAAGCTTCTTCCTAATCA+GGG - chr4_4:56980196-56980215 Msa0689760:CDS 40.0%
TGAAGCTTCTTCCTAATCAG+GGG - chr4_4:56980197-56980216 Msa0689760:CDS 40.0%
GTATTTGCCTGGATCAGTAT+AGG + chr4_4:56980227-56980246 None:intergenic 40.0%
CTAACTTTCCGACAAGTCTT+CGG + chr4_4:56980249-56980268 None:intergenic 40.0%
AAGTACGTTAAAGGATCACC+TGG - chr4_4:56980376-56980395 Msa0689760:intron 40.0%
GTTAAAGGATCACCTGGTAA+GGG - chr4_4:56980382-56980401 Msa0689760:intron 40.0%
TTAAAGGATCACCTGGTAAG+GGG - chr4_4:56980383-56980402 Msa0689760:intron 40.0%
! GAAAAACTGGATTGGATGAG+AGG + chr4_4:56980705-56980724 None:intergenic 40.0%
TTTGTCCTCTCGTGAAAAAC+TGG + chr4_4:56980718-56980737 None:intergenic 40.0%
! AAAGGAGGTTCTGATGATTC+CGG + chr4_4:56980785-56980804 None:intergenic 40.0%
AACCTCCTTTGTCAATTCCA+AGG - chr4_4:56980795-56980814 Msa0689760:intron 40.0%
ATCCTTGGAATTGACAAAGG+AGG + chr4_4:56980800-56980819 None:intergenic 40.0%
TTGATTGGGGATTAACTAGG+AGG - chr4_4:56978938-56978957 Msa0689760:intron 40.0%
!! GTCTTTGGAAGGATAATGGA+TGG + chr4_4:56981548-56981567 None:intergenic 40.0%
CAGAGAAGTTGGACATTGAT+GGG - chr4_4:56981585-56981604 Msa0689760:intron 40.0%
AGAGAAGTTGGACATTGATG+GGG - chr4_4:56981586-56981605 Msa0689760:intron 40.0%
! TGACGAAACTCTGGAAAGAT+AGG + chr4_4:56981618-56981637 None:intergenic 40.0%
TATCTTTCCAGAGTTTCGTC+AGG - chr4_4:56981617-56981636 Msa0689760:intron 40.0%
GTCAGGTGTTTCAGATGATA+TGG - chr4_4:56981634-56981653 Msa0689760:intron 40.0%
ATCAATAGTGTGTGTGCATG+CGG + chr4_4:56982037-56982056 None:intergenic 40.0%
ATGGTGATTGATGAAGCTGT+TGG - chr4_4:56982083-56982102 Msa0689760:intron 40.0%
TGGTGATTGATGAAGCTGTT+GGG - chr4_4:56982084-56982103 Msa0689760:intron 40.0%
! GGTAATATTTCGGTTGGTTC+TGG - chr4_4:56982218-56982237 Msa0689760:intron 40.0%
! TGAACTTCTTCACAAGTTGG+TGG - chr4_4:56982442-56982461 Msa0689760:intron 40.0%
! GCCAGTCTGAAATTACACAA+AGG - chr4_4:56982480-56982499 Msa0689760:intron 40.0%
AGATACTCAACAATGTCCTC+AGG + chr4_4:56982512-56982531 None:intergenic 40.0%
GGACATTGTTGAGTATCTCA+AGG - chr4_4:56982514-56982533 Msa0689760:intron 40.0%
ATATGACCAGCGATGTTGTA+TGG - chr4_4:56982600-56982619 Msa0689760:intron 40.0%
! GAATAAGTGTAGTGGAGATG+AGG - chr4_4:56982660-56982679 Msa0689760:intron 40.0%
TCTGTAGTAAGGAGAGTAGA+TGG - chr4_4:56982833-56982852 Msa0689760:intron 40.0%
ACTAAAGAACTGTCTCGGTT+TGG - chr4_4:56983051-56983070 Msa0689760:intron 40.0%
AAACCTTCATGAAGAGTGAG+TGG + chr4_4:56983140-56983159 None:intergenic 40.0%
! CTCACTCTTCATGAAGGTTT+TGG - chr4_4:56983140-56983159 Msa0689760:intron 40.0%
!! GAAGGTTTTGGCCAATTTGT+TGG - chr4_4:56983152-56983171 Msa0689760:intron 40.0%
TCCTCTGCATCTAGATATAC+TGG - chr4_4:56983486-56983505 Msa0689760:intron 40.0%
TCCAGTATATCTAGATGCAG+AGG + chr4_4:56983490-56983509 None:intergenic 40.0%
! CTGATTCTCGGTTTTTGATC+TGG - chr4_4:56983622-56983641 Msa0689760:intron 40.0%
! ATTCTCGGTTTTTGATCTGG+TGG - chr4_4:56983625-56983644 Msa0689760:intron 40.0%
! TTCTCGGTTTTTGATCTGGT+GGG - chr4_4:56983626-56983645 Msa0689760:intron 40.0%
TATGAGTTCACCATATCAGC+TGG + chr4_4:56983766-56983785 None:intergenic 40.0%
!! TCTTTTGGTTGTGGAAGAGA+AGG - chr4_4:56983940-56983959 Msa0689760:intron 40.0%
!! CTTTTGGTTGTGGAAGAGAA+GGG - chr4_4:56983941-56983960 Msa0689760:intron 40.0%
!!! AGAAGGGTTGGGTTTTTTCA+TGG - chr4_4:56983957-56983976 Msa0689760:intron 40.0%
ACCTATCTGACGTACTTGAT+TGG - chr4_4:56984128-56984147 Msa0689760:CDS 40.0%
! TGAAGAGCGTGCAATATTGT+TGG - chr4_4:56984291-56984310 Msa0689760:CDS 40.0%
! GAAGAGCGTGCAATATTGTT+GGG - chr4_4:56984292-56984311 Msa0689760:CDS 40.0%
TGGCACTGTCATATAAACCA+TGG - chr4_4:56984478-56984497 Msa0689760:intron 40.0%
GTAGCTTCATGTTCCAGAAT+TGG - chr4_4:56984552-56984571 Msa0689760:CDS 40.0%
!! TTTTAGAGATGGCTGATGCA+TGG + chr4_4:56984608-56984627 None:intergenic 40.0%
!! TCTCATTTCAAAGCTTGCTG+TGG + chr4_4:56984686-56984705 None:intergenic 40.0%
!!! CCCCCTTTACTTTTTACAGA+TGG + chr4_4:56984760-56984779 None:intergenic 40.0%
! CCGCAATTTTCTTTGATCCT+CGG + chr4_4:56984783-56984802 None:intergenic 40.0%
CCGAGGATCAAAGAAAATTG+CGG - chr4_4:56984780-56984799 Msa0689760:intron 40.0%
CTCTACTATCATGCTTGATG+AGG - chr4_4:56984894-56984913 Msa0689760:intron 40.0%
CATTTATTCTATCCCACCTG+CGG + chr4_4:56984936-56984955 None:intergenic 40.0%
GGATAGAATAAATGGAGCTC+AGG - chr4_4:56984942-56984961 Msa0689760:intron 40.0%
CTCCCTCGGTAAAAGTTTAA+GGG + chr4_4:56984968-56984987 None:intergenic 40.0%
TCTCCCTCGGTAAAAGTTTA+AGG + chr4_4:56984969-56984988 None:intergenic 40.0%
TAAGTGCATCTGTAATCTGC+AGG - chr4_4:56985143-56985162 Msa0689760:intron 40.0%
TCTCTGTGCCGAAAGAAAAT+AGG - chr4_4:56985578-56985597 Msa0689760:CDS 40.0%
CTCTGTGCCGAAAGAAAATA+GGG - chr4_4:56985579-56985598 Msa0689760:CDS 40.0%
GTAGATTCGGAGAGATCCAT+CGG + chr4_4:56976184-56976203 None:intergenic 45.0%
CTTCTCGAGTGTGTAAGGTT+TGG + chr4_4:56976235-56976254 None:intergenic 45.0%
! TTTTGCTGGGATGATCGGAA+AGG - chr4_4:56976408-56976427 Msa0689760:intron 45.0%
! TTTGCGAGACAAAAGCGTGT+TGG - chr4_4:56976441-56976460 Msa0689760:intron 45.0%
GTCATTGTCAGTTTCGTGTC+CGG + chr4_4:56976550-56976569 None:intergenic 45.0%
ATTGTGGATGTAGGTGGTAG+GGG - chr4_4:56977046-56977065 Msa0689760:CDS 45.0%
!! GGTGAAAGAGTTTGGTGTAC+CGG - chr4_4:56977078-56977097 Msa0689760:CDS 45.0%
ACATGGTGAAGTCCATGAGT+TGG - chr4_4:56977101-56977120 Msa0689760:CDS 45.0%
!! TGAAGTCCATGAGTTGGTGT+GGG - chr4_4:56977107-56977126 Msa0689760:CDS 45.0%
TTCAAATGGTGCTTTGTCCG+AGG - chr4_4:56977177-56977196 Msa0689760:CDS 45.0%
GGAATAGGCACTACTAAAGG+CGG + chr4_4:56977226-56977245 None:intergenic 45.0%
GACGGAATAGGCACTACTAA+AGG + chr4_4:56977229-56977248 None:intergenic 45.0%
TTAGTAGTGCCTATTCCGTC+GGG - chr4_4:56977229-56977248 Msa0689760:intron 45.0%
GGGGTCTTTGTGGATCAAAA+TGG - chr4_4:56977424-56977443 Msa0689760:intron 45.0%
GGAAACTTATTCCTGAAGGC+AGG - chr4_4:56977446-56977465 Msa0689760:CDS 45.0%
TTCCTGAAGGCAGGATTTGT+TGG - chr4_4:56977455-56977474 Msa0689760:CDS 45.0%
CTTCTGAATCACGACTTCCA+AGG + chr4_4:56977491-56977510 None:intergenic 45.0%
GGCAGCAAAGCTATAGCATA+CGG + chr4_4:56977514-56977533 None:intergenic 45.0%
GTATCACGGAGTTACTGCTT+TGG + chr4_4:56977709-56977728 None:intergenic 45.0%
AAGCAGCTTGCACAATGACA+AGG + chr4_4:56978039-56978058 None:intergenic 45.0%
CGTAGACTTGAATCTTCAGG+TGG + chr4_4:56978062-56978081 None:intergenic 45.0%
GCACGTAGACTTGAATCTTC+AGG + chr4_4:56978065-56978084 None:intergenic 45.0%
AAGTCTACGTGCTGCAAAAG+AGG - chr4_4:56978073-56978092 Msa0689760:CDS 45.0%
AGTCTACGTGCTGCAAAAGA+GGG - chr4_4:56978074-56978093 Msa0689760:CDS 45.0%
GAGGTAGCACAATCAAAGTC+AGG + chr4_4:56979070-56979089 None:intergenic 45.0%
GGATCATCCCAAACTGTTGA+AGG - chr4_4:56979278-56979297 Msa0689760:CDS 45.0%
TAAAACAATCTCCTCGGGCA+TGG + chr4_4:56979324-56979343 None:intergenic 45.0%
TTTACATGGAGCAACCTCCT+GGG + chr4_4:56979405-56979424 None:intergenic 45.0%
ATTTACATGGAGCAACCTCC+TGG + chr4_4:56979406-56979425 None:intergenic 45.0%
! ATTCTTGCATGGTGACTTGG+AGG + chr4_4:56979434-56979453 None:intergenic 45.0%
TGCATTCTTGCATGGTGACT+TGG + chr4_4:56979437-56979456 None:intergenic 45.0%
!! TGTTCGACTCTTTTTGGCCA+TGG + chr4_4:56979503-56979522 None:intergenic 45.0%
! GGCATCTGTTCGACTCTTTT+TGG + chr4_4:56979509-56979528 None:intergenic 45.0%
! AATGTTAAGGTTGGCCCTGA+TGG + chr4_4:56979628-56979647 None:intergenic 45.0%
! AGCTTGTTCCACTTCCTTCT+GGG + chr4_4:56979681-56979700 None:intergenic 45.0%
!! AGGAAGTATTGTCCCATCCA+GGG + chr4_4:56979759-56979778 None:intergenic 45.0%
GGGTTGAACGATTACCTTTG+CGG - chr4_4:56979884-56979903 Msa0689760:intron 45.0%
TGAACGATTACCTTTGCGGA+TGG - chr4_4:56979888-56979907 Msa0689760:intron 45.0%
ATTACCTTTGCGGATGGCAA+TGG - chr4_4:56979894-56979913 Msa0689760:intron 45.0%
TTACCTTTGCGGATGGCAAT+GGG - chr4_4:56979895-56979914 Msa0689760:intron 45.0%
AAATGCTCCTTCGGTTGAGT+TGG - chr4_4:56980029-56980048 Msa0689760:CDS 45.0%
TATGTCGTATCTGGTACGAC+TGG + chr4_4:56980117-56980136 None:intergenic 45.0%
!! CGACATATTTTGGAGGAGAC+AGG - chr4_4:56980130-56980149 Msa0689760:CDS 45.0%
TTTGGAGGAGACAGGTCTTA+CGG - chr4_4:56980138-56980157 Msa0689760:CDS 45.0%
CAAACCAGTTGAGACTCCTA+TGG - chr4_4:56980165-56980184 Msa0689760:CDS 45.0%
GAAGCTTCTTCCTAATCAGG+GGG - chr4_4:56980198-56980217 Msa0689760:CDS 45.0%
ACAAGTCTTCGGTATTTGCC+TGG + chr4_4:56980238-56980257 None:intergenic 45.0%
GGCAAATACCGAAGACTTGT+CGG - chr4_4:56980238-56980257 Msa0689760:CDS 45.0%
ACTCTCCTTGTGACAACCAT+TGG - chr4_4:56980332-56980351 Msa0689760:intron 45.0%
GCATTCCAATGGTTGTCACA+AGG + chr4_4:56980340-56980359 None:intergenic 45.0%
CGTTAAAGGATCACCTGGTA+AGG - chr4_4:56980381-56980400 Msa0689760:intron 45.0%
GGGCTTGTCTTTACTGATAG+AGG - chr4_4:56980403-56980422 Msa0689760:intron 45.0%
AGAGGCAACACCGAAATCAT+TGG - chr4_4:56980421-56980440 Msa0689760:intron 45.0%
! TATTCAGATGCTGATTGGGC+AGG - chr4_4:56980445-56980464 Msa0689760:intron 45.0%
CAGGAGATGCAAGTGATAGA+CGG - chr4_4:56980464-56980483 Msa0689760:intron 45.0%
TGTTGCTCGATCAAGTACAG+AGG - chr4_4:56980555-56980574 Msa0689760:intron 45.0%
CCTCTCGTGAAAAACTGGAT+TGG + chr4_4:56980713-56980732 None:intergenic 45.0%
! CCAATCCAGTTTTTCACGAG+AGG - chr4_4:56980710-56980729 Msa0689760:intron 45.0%
!! GATATCAGCGAGTTGATCCT+TGG + chr4_4:56980815-56980834 None:intergenic 45.0%
CTAAATCTCTACGAGGTCCT+CGG - chr4_4:56980839-56980858 Msa0689760:intron 45.0%
ATGTGTATGCACCACCTTGA+GGG - chr4_4:56980896-56980915 Msa0689760:intron 45.0%
TGAAAATGGGAGCTATGAGG+AGG - chr4_4:56981466-56981485 Msa0689760:intron 45.0%
TGTTCATGAGCCAGAGAAGT+TGG - chr4_4:56981574-56981593 Msa0689760:intron 45.0%
CCATCAATGTCCAACTTCTC+TGG + chr4_4:56981587-56981606 None:intergenic 45.0%
CCAGAGAAGTTGGACATTGA+TGG - chr4_4:56981584-56981603 Msa0689760:intron 45.0%
TGAAACACCTGACGAAACTC+TGG + chr4_4:56981627-56981646 None:intergenic 45.0%
! TTCAAGTGCTGCATTCTCGT+CGG + chr4_4:56981672-56981691 None:intergenic 45.0%
TGCAACTTATGCCTTTCGGT+TGG - chr4_4:56981945-56981964 Msa0689760:intron 45.0%
AACTTATGCCTTTCGGTTGG+AGG - chr4_4:56981948-56981967 Msa0689760:intron 45.0%
! TTAGTTAGCCTCCAACCGAA+AGG + chr4_4:56981959-56981978 None:intergenic 45.0%
! TCAGGGGCGTGGTAATATTT+CGG - chr4_4:56982208-56982227 Msa0689760:intron 45.0%
! CTCCAAGCATTGCTTCTTAC+TGG - chr4_4:56982278-56982297 Msa0689760:intron 45.0%
GTCCAGTAAGAAGCAATGCT+TGG + chr4_4:56982283-56982302 None:intergenic 45.0%
ACAAGTGCAAGTCATTGCAC+CGG - chr4_4:56982411-56982430 Msa0689760:intron 45.0%
GAAGAAGTTCAAGAGCTTGC+CGG + chr4_4:56982433-56982452 None:intergenic 45.0%
TACACAAAGGTTCAAGCCTG+AGG - chr4_4:56982493-56982512 Msa0689760:intron 45.0%
CGCTGGTCATATAGTATTGC+CGG + chr4_4:56982592-56982611 None:intergenic 45.0%
ACCAGCGATGTTGTATGGAA+CGG - chr4_4:56982605-56982624 Msa0689760:intron 45.0%
TGTTGTATGGAACGGAGTGT+TGG - chr4_4:56982613-56982632 Msa0689760:intron 45.0%
! GTTGTATGGAACGGAGTGTT+GGG - chr4_4:56982614-56982633 Msa0689760:intron 45.0%
ATGAGGATGTTGCGTTGGAT+AGG - chr4_4:56982677-56982696 Msa0689760:intron 45.0%
GATAGGTGGCAAGACTAGAT+AGG - chr4_4:56982694-56982713 Msa0689760:intron 45.0%
GTGGCAAGACTAGATAGGAT+AGG - chr4_4:56982699-56982718 Msa0689760:intron 45.0%
ATTAGAGGGGAGAGAGAGTT+GGG - chr4_4:56982737-56982756 Msa0689760:intron 45.0%
! AAAAGTGGTGGAAACGGCTT+AGG - chr4_4:56982777-56982796 Msa0689760:intron 45.0%
! TGGAAACGGCTTAGGTTGTT+TGG - chr4_4:56982785-56982804 Msa0689760:intron 45.0%
! GGAAACGGCTTAGGTTGTTT+GGG - chr4_4:56982786-56982805 Msa0689760:intron 45.0%
GTAGTAAGGAGAGTAGATGG+AGG - chr4_4:56982836-56982855 Msa0689760:intron 45.0%
GAGGATAGTCAGATCACTAG+AGG - chr4_4:56982855-56982874 Msa0689760:intron 45.0%
! CAAGCTTTATCCCACTAGGT+GGG + chr4_4:56983001-56983020 None:intergenic 45.0%
! CAACCAAGCTTTATCCCACT+AGG + chr4_4:56983005-56983024 None:intergenic 45.0%
!! ACTGTCTCGGTTTGGTTCAT+AGG - chr4_4:56983059-56983078 Msa0689760:intron 45.0%
AGTCCACTCACTCTTCATGA+AGG - chr4_4:56983134-56983153 Msa0689760:intron 45.0%
TCAGTGACGCTTCTGATTCT+CGG - chr4_4:56983610-56983629 Msa0689760:intron 45.0%
GCCAATCAAGTACGTCAGAT+AGG + chr4_4:56984132-56984151 None:intergenic 45.0%
!! GTCGGCTTTAGAAGGCATAT+CGG - chr4_4:56984219-56984238 Msa0689760:intron 45.0%
!! TCGGCTTTAGAAGGCATATC+GGG - chr4_4:56984220-56984239 Msa0689760:intron 45.0%
CATATCGGGATACAATCCAG+AGG - chr4_4:56984234-56984253 Msa0689760:intron 45.0%
GAGACAATGCCAGTTCATGT+TGG + chr4_4:56984327-56984346 None:intergenic 45.0%
ACTCTGATGGGGAGTTTCTT+TGG - chr4_4:56984400-56984419 Msa0689760:intron 45.0%
! TGGTGCACTACCTCTAGAAA+TGG + chr4_4:56984740-56984759 None:intergenic 45.0%
ACCATCACTCTTGCTACTGT+CGG + chr4_4:56984848-56984867 None:intergenic 45.0%
! TAGCAAGAGTGATGGTGATG+CGG - chr4_4:56984852-56984871 Msa0689760:intron 45.0%
CGCAGGTGGGATAGAATAAA+TGG - chr4_4:56984934-56984953 Msa0689760:intron 45.0%
! AGGCCCTTAAACTTTTACCG+AGG - chr4_4:56984962-56984981 Msa0689760:intron 45.0%
! GGCCCTTAAACTTTTACCGA+GGG - chr4_4:56984963-56984982 Msa0689760:intron 45.0%
ACCTGTAACTTAGTCTCCCT+CGG + chr4_4:56984982-56985001 None:intergenic 45.0%
ATTACGGGATGCTTACCTGA+AGG + chr4_4:56985260-56985279 None:intergenic 45.0%
!!! ATTTTCGAGTACAGGCACTG+TGG - chr4_4:56985383-56985402 Msa0689760:intron 45.0%
!!! TTTTCGAGTACAGGCACTGT+GGG - chr4_4:56985384-56985403 Msa0689760:intron 45.0%
TCAGAGGAAAGCAGTTGTGA+AGG - chr4_4:56985535-56985554 Msa0689760:CDS 45.0%
!! GTTTTTGCTGTCTACCCCAA+CGG - chr4_4:56985608-56985627 Msa0689760:CDS 45.0%
!! TTTTTGCTGTCTACCCCAAC+GGG - chr4_4:56985609-56985628 Msa0689760:CDS 45.0%
CTTTCTCAACTGAGACCCTT+TGG + chr4_4:56985690-56985709 None:intergenic 45.0%
ATCTCTCCGAATCTACTCGC+CGG - chr4_4:56976188-56976207 Msa0689760:CDS 50.0%
CTGTTTCCGGCGAGTAGATT+CGG + chr4_4:56976197-56976216 None:intergenic 50.0%
TTGTGGATGTAGGTGGTAGG+GGG - chr4_4:56977047-56977066 Msa0689760:CDS 50.0%
!! AGAGTTTGGTGTACCGGACA+TGG - chr4_4:56977084-56977103 Msa0689760:CDS 50.0%
CTCATGGACTTCACCATGTC+CGG + chr4_4:56977100-56977119 None:intergenic 50.0%
!! GTGAAGTCCATGAGTTGGTG+TGG - chr4_4:56977106-56977125 Msa0689760:CDS 50.0%
!! GAAGTCCATGAGTTGGTGTG+GGG - chr4_4:56977108-56977127 Msa0689760:CDS 50.0%
ATTCTCCCCACACCAACTCA+TGG + chr4_4:56977116-56977135 None:intergenic 50.0%
GGAGAACATTGGGGTCTTTG+TGG - chr4_4:56977414-56977433 Msa0689760:intron 50.0%
GACCAACAAATCCTGCCTTC+AGG + chr4_4:56977460-56977479 None:intergenic 50.0%
!! AGGCAGGATTTGTTGGTCAG+AGG - chr4_4:56977462-56977481 Msa0689760:CDS 50.0%
AGCTTTGCTGCCTAGATTCG+TGG - chr4_4:56977522-56977541 Msa0689760:CDS 50.0%
TTTGCTGCCTAGATTCGTGG+AGG - chr4_4:56977525-56977544 Msa0689760:CDS 50.0%
TCGGTTACCTCCACGAATCT+AGG + chr4_4:56977535-56977554 None:intergenic 50.0%
CAGAGTGATCAGCCTCACAA+CGG - chr4_4:56979257-56979276 Msa0689760:intron 50.0%
! GTTTGGGATGATCCGTTGTG+AGG + chr4_4:56979272-56979291 None:intergenic 50.0%
AATCTTCCAAACCATGCCCG+AGG - chr4_4:56979310-56979329 Msa0689760:CDS 50.0%
CCATGGCTGCAATGAAACGT+TGG + chr4_4:56979486-56979505 None:intergenic 50.0%
CCAACGTTTCATTGCAGCCA+TGG - chr4_4:56979483-56979502 Msa0689760:CDS 50.0%
GAGTATATCCCTTCGCCACT+TGG - chr4_4:56979578-56979597 Msa0689760:intron 50.0%
TATATCCCTTCGCCACTTGG+CGG - chr4_4:56979581-56979600 Msa0689760:intron 50.0%
AACCGATCTACCTGTCCATC+AGG - chr4_4:56979610-56979629 Msa0689760:intron 50.0%
ACCGATCTACCTGTCCATCA+GGG - chr4_4:56979611-56979630 Msa0689760:intron 50.0%
! GAGCTTGTTCCACTTCCTTC+TGG + chr4_4:56979682-56979701 None:intergenic 50.0%
! AAGTATTGTCCCATCCAGGG+TGG + chr4_4:56979756-56979775 None:intergenic 50.0%
!! CAGGAAGTATTGTCCCATCC+AGG + chr4_4:56979760-56979779 None:intergenic 50.0%
ATGGGCAAATCAGGAGATGC+AGG - chr4_4:56979913-56979932 Msa0689760:intron 50.0%
!! TCCTTCGGTTGAGTTGGATC+AGG - chr4_4:56980035-56980054 Msa0689760:CDS 50.0%
ACCTGATCCAACTCAACCGA+AGG + chr4_4:56980039-56980058 None:intergenic 50.0%
TCGTATCTGGTACGACTGGT+GGG + chr4_4:56980113-56980132 None:intergenic 50.0%
GGATCCATAGGAGTCTCAAC+TGG + chr4_4:56980172-56980191 None:intergenic 50.0%
AGATATGTCAGGCCGAGTCA+TGG + chr4_4:56980281-56980300 None:intergenic 50.0%
GGTTGTCACAAGGAGAGTTG+AGG + chr4_4:56980330-56980349 None:intergenic 50.0%
GTAAAGACAAGCCCCTTACC+AGG + chr4_4:56980397-56980416 None:intergenic 50.0%
AGTGATAGACGGTCTACGTC+TGG - chr4_4:56980475-56980494 Msa0689760:intron 50.0%
TTCACATGTGGCATGAGCCA+TGG + chr4_4:56980593-56980612 None:intergenic 50.0%
! ATGAGAGGTGCAACGCTGAT+TGG + chr4_4:56980690-56980709 None:intergenic 50.0%
GATGTGTATGCACCACCTTG+AGG - chr4_4:56980895-56980914 Msa0689760:intron 50.0%
TGTGTATGCACCACCTTGAG+GGG - chr4_4:56980897-56980916 Msa0689760:intron 50.0%
TATCTCAACACTCCCCCTCA+AGG + chr4_4:56980913-56980932 None:intergenic 50.0%
!! GCATTCTCGTCGGTTGGTAA+GGG + chr4_4:56981662-56981681 None:intergenic 50.0%
! TGCATTCTCGTCGGTTGGTA+AGG + chr4_4:56981663-56981682 None:intergenic 50.0%
TATTGAGAAGGCTACTGCGG+AGG - chr4_4:56981760-56981779 Msa0689760:intron 50.0%
ATTGAGAAGGCTACTGCGGA+GGG - chr4_4:56981761-56981780 Msa0689760:intron 50.0%
!! AATTATTGGTGTCAGGGGCG+TGG - chr4_4:56982197-56982216 Msa0689760:intron 50.0%
GGGCGTGGTAATATTTCGGT+TGG - chr4_4:56982212-56982231 Msa0689760:intron 50.0%
!! TTTCGGTTGGTTCTGGAGCT+CGG - chr4_4:56982225-56982244 Msa0689760:intron 50.0%
TCCGTTCCATACAACATCGC+TGG + chr4_4:56982609-56982628 None:intergenic 50.0%
TGGAGATGAGGATGTTGCGT+TGG - chr4_4:56982672-56982691 Msa0689760:intron 50.0%
AGGATGTTGCGTTGGATAGG+TGG - chr4_4:56982680-56982699 Msa0689760:intron 50.0%
CATTAGAGGGGAGAGAGAGT+TGG - chr4_4:56982736-56982755 Msa0689760:intron 50.0%
AGTCAGATCACTAGAGGCAG+AGG - chr4_4:56982861-56982880 Msa0689760:intron 50.0%
CTTTATCCCACTAGGTGGGT+CGG + chr4_4:56982997-56983016 None:intergenic 50.0%
! CCAAGCTTTATCCCACTAGG+TGG + chr4_4:56983002-56983021 None:intergenic 50.0%
CCACCTAGTGGGATAAAGCT+TGG - chr4_4:56982999-56983018 Msa0689760:intron 50.0%
!! CGGTTTGGTTCATAGGAGCT+AGG - chr4_4:56983066-56983085 Msa0689760:intron 50.0%
TAGGAGCTAGGAAGCAGTAG+TGG - chr4_4:56983078-56983097 Msa0689760:intron 50.0%
ATGGGATCCGTCTCACATAG+CGG + chr4_4:56983664-56983683 None:intergenic 50.0%
GACGGATCCCATACTTGTTC+TGG - chr4_4:56983672-56983691 Msa0689760:intron 50.0%
TGGTTGTGGAAGAGAAGGGT+TGG - chr4_4:56983945-56983964 Msa0689760:intron 50.0%
GGTTGTGGAAGAGAAGGGTT+GGG - chr4_4:56983946-56983965 Msa0689760:intron 50.0%
!! AAGCTTGCTGTGGTCTTTCG+AGG + chr4_4:56984676-56984695 None:intergenic 50.0%
GTAAAAAGTAAAGGGGGCCG+AGG - chr4_4:56984763-56984782 Msa0689760:intron 50.0%
ACCGACAGTAGCAAGAGTGA+TGG - chr4_4:56984844-56984863 Msa0689760:intron 50.0%
ACCGAGGGAGACTAAGTTAC+AGG - chr4_4:56984978-56984997 Msa0689760:intron 50.0%
GGGGGAGTTTGTACGATTGA+TGG - chr4_4:56985305-56985324 Msa0689760:intron 50.0%
CAGAGAACACATGCTATCGC+TGG + chr4_4:56985564-56985583 None:intergenic 50.0%
CTCTTACTCGGTTGCTCCGA+TGG - chr4_4:56976165-56976184 Msa0689760:CDS 55.0%
TGTAGGTGGTAGGGGGTTTG+TGG - chr4_4:56977054-56977073 Msa0689760:CDS 55.0%
GGGAGAGCTGCTTCTTGGAA+AGG - chr4_4:56977249-56977268 Msa0689760:intron 55.0%
!! TTGTTGGTCAGAGGCACCCT+TGG - chr4_4:56977471-56977490 Msa0689760:CDS 55.0%
TCGTGGAGGTAACCGACTGT+TGG - chr4_4:56977539-56977558 Msa0689760:CDS 55.0%
CGTGGAGGTAACCGACTGTT+GGG - chr4_4:56977540-56977559 Msa0689760:CDS 55.0%
GGTCTCTTTCCGGTTCCTCT+TGG - chr4_4:56977752-56977771 Msa0689760:intron 55.0%
TACAGTACCTGGGCTCCAAG+AGG + chr4_4:56977770-56977789 None:intergenic 55.0%
CAGCTACTCAGCTAGTAGGG+GGG + chr4_4:56978213-56978232 None:intergenic 55.0%
CCAGCTACTCAGCTAGTAGG+GGG + chr4_4:56978214-56978233 None:intergenic 55.0%
GCCAGCTACTCAGCTAGTAG+GGG + chr4_4:56978215-56978234 None:intergenic 55.0%
CGCCAGCTACTCAGCTAGTA+GGG + chr4_4:56978216-56978235 None:intergenic 55.0%
CCTACTAGCTGAGTAGCTGG+CGG - chr4_4:56978214-56978233 Msa0689760:intron 55.0%
GAGGACCCAAGTCCTTAGTC+TGG - chr4_4:56979110-56979129 Msa0689760:intron 55.0%
CAATCTCCTCGGGCATGGTT+TGG + chr4_4:56979319-56979338 None:intergenic 55.0%
!! TCCTGGGTTTGTTGCTCAGG+GGG + chr4_4:56979389-56979408 None:intergenic 55.0%
!! CTCCTGGGTTTGTTGCTCAG+GGG + chr4_4:56979390-56979409 None:intergenic 55.0%
!! CCTCCTGGGTTTGTTGCTCA+GGG + chr4_4:56979391-56979410 None:intergenic 55.0%
!! ACCTCCTGGGTTTGTTGCTC+AGG + chr4_4:56979392-56979411 None:intergenic 55.0%
ATATCCCTTCGCCACTTGGC+GGG - chr4_4:56979582-56979601 Msa0689760:intron 55.0%
! GCCCTGATGGACAGGTAGAT+CGG + chr4_4:56979615-56979634 None:intergenic 55.0%
! TAAGGTTGGCCCTGATGGAC+AGG + chr4_4:56979623-56979642 None:intergenic 55.0%
TATTGTCCCATCCAGGGTGG+AGG + chr4_4:56979753-56979772 None:intergenic 55.0%
TTGCCCATTGCCATCCGCAA+AGG + chr4_4:56979901-56979920 None:intergenic 55.0%
CGGATGGCAATGGGCAAATC+AGG - chr4_4:56979904-56979923 Msa0689760:intron 55.0%
GGCAAATCAGGAGATGCAGG+TGG - chr4_4:56979916-56979935 Msa0689760:intron 55.0%
TCAGGAGATGCAGGTGGATC+CGG - chr4_4:56979922-56979941 Msa0689760:intron 55.0%
GGAGCAGGAACTGAAGCATG+TGG - chr4_4:56979964-56979983 Msa0689760:CDS 55.0%
GTCGTATCTGGTACGACTGG+TGG + chr4_4:56980114-56980133 None:intergenic 55.0%
GTATAGGGCTCCCCCTGATT+AGG + chr4_4:56980211-56980230 None:intergenic 55.0%
!! AGAGGCTGAGTATCGAGCCA+TGG - chr4_4:56980573-56980592 Msa0689760:intron 55.0%
GTGTATGCACCACCTTGAGG+GGG - chr4_4:56980898-56980917 Msa0689760:intron 55.0%
AGTGCTGCATTCTCGTCGGT+TGG + chr4_4:56981668-56981687 None:intergenic 55.0%
!! TTCGGTTGGTTCTGGAGCTC+GGG - chr4_4:56982226-56982245 Msa0689760:intron 55.0%
ATGTAGCCGACCCACCTAGT+GGG - chr4_4:56982988-56983007 Msa0689760:intron 55.0%
GATGCAGCCGCTATGTGAGA+CGG - chr4_4:56983654-56983673 Msa0689760:intron 55.0%
AGACGTTTCAGCAGAGCCTC+TGG + chr4_4:56984253-56984272 None:intergenic 55.0%
TCCTTGATCTGTTGAGCCGC+AGG - chr4_4:56984917-56984936 Msa0689760:intron 55.0%
ACCTGCGGCTCAACAGATCA+AGG + chr4_4:56984921-56984940 None:intergenic 55.0%
TTGATCTGTTGAGCCGCAGG+TGG - chr4_4:56984920-56984939 Msa0689760:intron 55.0%
TGATCTGTTGAGCCGCAGGT+GGG - chr4_4:56984921-56984940 Msa0689760:intron 55.0%
GCGACAGAGCGAAAACCTTC+AGG - chr4_4:56985242-56985261 Msa0689760:intron 55.0%
! GCTGCAACGTGTCACTGACA+GGG - chr4_4:56985406-56985425 Msa0689760:CDS 55.0%
AGGTGGTAGGGGGTTTGTGG+AGG - chr4_4:56977057-56977076 Msa0689760:CDS 60.0%
AGCAGCTCTCCCGACGGAAT+AGG + chr4_4:56977241-56977260 None:intergenic 60.0%
CCAAGAAGCAGCTCTCCCGA+CGG + chr4_4:56977247-56977266 None:intergenic 60.0%
ACCTGGGCTCCAAGAGGAAC+CGG + chr4_4:56977764-56977783 None:intergenic 60.0%
CCCCCTACTAGCTGAGTAGC+TGG - chr4_4:56978211-56978230 Msa0689760:intron 60.0%
CCGCCAGCTACTCAGCTAGT+AGG + chr4_4:56978217-56978236 None:intergenic 60.0%
! TGCTCAGGGGGAGTGTGATC+TGG + chr4_4:56979377-56979396 None:intergenic 60.0%
TCCCCCTGAGCAACAAACCC+AGG - chr4_4:56979385-56979404 Msa0689760:CDS 60.0%
CCCTGAGCAACAAACCCAGG+AGG - chr4_4:56979388-56979407 Msa0689760:CDS 60.0%
AAAGCCCGCCAAGTGGCGAA+GGG + chr4_4:56979589-56979608 None:intergenic 60.0%
TCGGTTGAAAGCCCGCCAAG+TGG + chr4_4:56979596-56979615 None:intergenic 60.0%
! AGTATGGCTTGCCTCCACCC+TGG - chr4_4:56979739-56979758 Msa0689760:intron 60.0%
ATGCAGGTGGATCCGGAGCA+GGG - chr4_4:56979929-56979948 Msa0689760:intron 60.0%
AAGTGTCTCCACCCCTGCTC+CGG + chr4_4:56979944-56979963 None:intergenic 60.0%
GGGGAGCCCTATACTGATCC+AGG - chr4_4:56980217-56980236 Msa0689760:CDS 60.0%
CTCAACACTCCCCCTCAAGG+TGG + chr4_4:56980910-56980929 None:intergenic 60.0%
TGGGAGCTATGAGGAGGCTG+TGG - chr4_4:56981472-56981491 Msa0689760:intron 60.0%
!! TGGTTCTGGAGCTCGGGAGA+TGG - chr4_4:56982232-56982251 Msa0689760:intron 60.0%
CACTAGGTGGGTCGGCTACA+TGG + chr4_4:56982989-56983008 None:intergenic 60.0%
CATGTAGCCGACCCACCTAG+TGG - chr4_4:56982987-56983006 Msa0689760:intron 60.0%
! TGCGGAGATTGAGGGTGCAG+AGG - chr4_4:56984798-56984817 Msa0689760:intron 60.0%
! GGCTGCAACGTGTCACTGAC+AGG - chr4_4:56985405-56985424 Msa0689760:CDS 60.0%
!! TGCACGAGAGTGCTCCCGTT+GGG + chr4_4:56985626-56985645 None:intergenic 60.0%
CCGTCGGGAGAGCTGCTTCT+TGG - chr4_4:56977244-56977263 Msa0689760:intron 65.0%
TCCGGTTCCTCTTGGAGCCC+AGG - chr4_4:56977760-56977779 Msa0689760:intron 65.0%
GAAAGCCCGCCAAGTGGCGA+AGG + chr4_4:56979590-56979609 None:intergenic 65.0%
! TGGCTTGCCTCCACCCTGGA+TGG - chr4_4:56979743-56979762 Msa0689760:intron 65.0%
GGCTTGCCTCCACCCTGGAT+GGG - chr4_4:56979744-56979763 Msa0689760:intron 65.0%
GATGCAGGTGGATCCGGAGC+AGG - chr4_4:56979928-56979947 Msa0689760:intron 65.0%
TGCAGGTGGATCCGGAGCAG+GGG - chr4_4:56979930-56979949 Msa0689760:intron 65.0%
GGAGCAGGGGTGGAGACACT+TGG - chr4_4:56979943-56979962 Msa0689760:CDS 65.0%
GGGGTGGAGACACTTGGAGC+AGG - chr4_4:56979949-56979968 Msa0689760:CDS 65.0%
!! GCACGAGAGTGCTCCCGTTG+GGG + chr4_4:56985625-56985644 None:intergenic 65.0%
!! GTGCACGAGAGTGCTCCCGT+TGG + chr4_4:56985627-56985646 None:intergenic 65.0%
AGGTGGATCCGGAGCAGGGG+TGG - chr4_4:56979933-56979952 Msa0689760:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 56976081 56985715 56976081 ID=Msa0689760;Name=Msa0689760
chr4_4 mRNA 56976081 56985715 56976081 ID=Msa0689760-mRNA-1;Parent=Msa0689760;Name=Msa0689760-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.81|0.83|1|1|1|12|0|962
chr4_4 exon 56985400 56985715 56985400 ID=Msa0689760-mRNA-1:exon:15175;Parent=Msa0689760-mRNA-1
chr4_4 exon 56984526 56984737 56984526 ID=Msa0689760-mRNA-1:exon:15174;Parent=Msa0689760-mRNA-1
chr4_4 exon 56984250 56984381 56984250 ID=Msa0689760-mRNA-1:exon:15173;Parent=Msa0689760-mRNA-1
chr4_4 exon 56984015 56984158 56984015 ID=Msa0689760-mRNA-1:exon:15172;Parent=Msa0689760-mRNA-1
chr4_4 exon 56983685 56983797 56983685 ID=Msa0689760-mRNA-1:exon:15171;Parent=Msa0689760-mRNA-1
chr4_4 exon 56979940 56980348 56979940 ID=Msa0689760-mRNA-1:exon:15170;Parent=Msa0689760-mRNA-1
chr4_4 exon 56979261 56979584 56979261 ID=Msa0689760-mRNA-1:exon:15169;Parent=Msa0689760-mRNA-1
chr4_4 exon 56977914 56978135 56977914 ID=Msa0689760-mRNA-1:exon:15168;Parent=Msa0689760-mRNA-1
chr4_4 exon 56977436 56977678 56977436 ID=Msa0689760-mRNA-1:exon:15167;Parent=Msa0689760-mRNA-1
chr4_4 exon 56976797 56977240 56976797 ID=Msa0689760-mRNA-1:exon:15166;Parent=Msa0689760-mRNA-1
chr4_4 exon 56976533 56976631 56976533 ID=Msa0689760-mRNA-1:exon:15165;Parent=Msa0689760-mRNA-1
chr4_4 exon 56976081 56976311 56976081 ID=Msa0689760-mRNA-1:exon:15164;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56985400 56985715 56985400 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56984526 56984737 56984526 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56984250 56984381 56984250 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56984015 56984158 56984015 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56983685 56983797 56983685 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56979940 56980348 56979940 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56979261 56979584 56979261 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56977914 56978135 56977914 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56977436 56977678 56977436 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56976797 56977240 56976797 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56976533 56976631 56976533 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
chr4_4 CDS 56976081 56976311 56976081 ID=Msa0689760-mRNA-1:cds;Parent=Msa0689760-mRNA-1
Gene Sequence

>Msa0689760

ATGGTGCACAGTGCGTACGATAGTTTCGAACTCGTTCCCAATTTCAACGGCAAGATCGAATCCATCGAATCCTACGGTTCAAAACTCTTACTCGGTTGCTCCGATGGATCTCTCCGAATCTACTCGCCGGAAACAGAATTCTCCGATCATTCCAAACCTTACACACTCGAGAAGAATCTCGCTAATTTTGCGAAGAAGCCTGTTGTTTCAATGGAAGTGTTGGAATCAAGAGAGCTTCTTTTATCGCTTTCTGAATCAATCGCGTTTCATAGATTACCTAGTTTGGAAACTATAGCGGTTATTACCAAAGCTAAAGGTGGTAGGGGGTTTGTGGAGGTGAAAGAGTTTGGTGTACCGGACATGGTGAAGTCCATGAGTTGGTGTGGGGAGAATATATGTTTGGGGATTAGAAGGGAATATGTGATTTTGAATGCTTCAAATGGTGCTTTGTCCGAGGTTTTTACTTCTGGGAGACTAGCGCCGCCTTTAGTAGTGCCTATTCCGTCGGGAGAGCTGCTTCTTGGAAAGGAGAACATTGGGGTCTTTGTGGATCAAAATGGGAAACTTATTCCTGAAGGCAGGATTTGTTGGTCAGAGGCACCCTTGGAAGTCGTGATTCAGAAGCCGTATGCTATAGCTTTGCTGCCTAGATTCGTGGAGATTCGATCTCTTCGACAACCTTATCCGTTGATACAAACTATTGTTCTTCGCAATGTTCGTCATCTTTGCCAAAGCAGTAACTCCGTGATACTTGCTTTGGATAATTCTATTCAAGGTCTCTTTCCGGTTCCTCTTGGAGCCCAGATTGTCCAACTAACTGCTTCTGGAAACTTTGAAGAGGCCTTGTCATTGTGCAAGCTGCTTCCACCTGAAGATTCAAGTCTACGTGCTGCAAAAGAGGGATCAATTCATATAAGATATGCCCACTATCTTTTTGAAAATGGGAGCTATGAGGAGGCTGTGGAACATTTTCTAGAATCTCAAGTAGATATAACCTATGTGCTTTCTCTTTATCCATCCATTATCCTTCCAAAGACAACTATTGTTCATGAGCCAGAGAAGTTGGACATTGATGGGGATGATTCCTATCTTTCCAGAGTTTCGTCAGGTGTTTCAGATGATATGGAACCCTTACCAACCGACGAGAATGCAGCACTTGAATCCAAAAAAACGAATCATAATATGCTTATGGCTCTCATAAAATATTTGCAGAAGAAGAGAGGTAATTTTATTGAGAAGGCTACTGCGGAGGGAACTGAAGAAGTTGTTTTAGATGCAGTTGGCGATAACTATGCATCCTACAATAGGTTTAAAAAAGTAAACAAGGGGCGTGGTAATATTTCGGTTGGTTCTGGAGCTCGGGAGATGGCTTCAATATTAGACACTGCTCTACTCCAAGCATTGCTTCTTACTGGACAATCTTCAGCAGCTTTAGAAATACTAAGAGGTGTTAATTACTGCGATATGAAAATATGTGAAGAAATACTTCGAAAAGGCAATCTTAATGCTGCTTTATTAGAACTTTACAAGTGCAAGTCATTGCACCGGCAAGCTCTTGAACTTCTTCACAAGTTGGTGGAAGAGTCAAGATCTAGCCAGTCTGAAATTACACAAAGGTTCAAGCCTGAGGACATTGTTGAGTATCTCAAGCCGCTATGTGAGACGGATCCCATACTTGTTCTGGAATTCTCAATGCTTGTTCTTGAAAGCTGTCCATCCCAAACTATTGAGCTTTTTCTGTCTGGAAATATACCAGCTGATATGGTGAACTCATATTTGAAGCAGCACTCTCCAAACATGCAAGCTAAGTACTTGGAGCTCATGCTTGCAATGAATGAGAATGCCATATCTGGCAATCTGCAAAATGAAATGGTAAACATCTACCTATCTGACGTACTTGATTGGCATGCCGACTTAAATGCTCAACAAAATTGGGACGAGAAAACTTATACCCCAACTAGGAAAAAATTATTGTCGGCTTTAGAAGGCATATCGGGATACAATCCAGAGGCTCTGCTGAAACGTCTTCCTCAAGATGCTTTATATGAAGAGCGTGCAATATTGTTGGGAAAAATGAACCAACATGAACTGGCATTGTCTCTGTATGTTCATAAGCTTCATGTTCCAGAATTGGCATTATCATATTGTGATCGGGTGTACGAGTCCATGCATCAGCCATCTCTAAAAAAATCTAGCAACATATACCTATTGCTTATGCAAATCTATTTGAATCCTCGAAAGACCACAGCAAGCTTTGAAATGAGAATTACAAATCTATTATCCCCACAAAATACAGCCATTTCTAGAGGTAGTGCACCATCTGTAAAAAGTAAAGGGGGCCGAGGATCAAAGAAAATTGCGGAGATTGAGGGTGCAGAGGACACAAAAGTTAGTTTGAGCAGCACCGACAGTAGCAAGAGTGATGGTGATGCGGATGAATTTAATGAGGGTGACTCTACTATCATGCTTGATGAGGTCCTTGATCTGTTGAGCCGCAGGTGGGATAGAATAAATGGAGCTCAGGCCCTTAAACTTTTACCGAGGGAGACTAAGTTACAGGATTTGCAATCATTTCTTGGGCCTCTTTTGAGAAAATCTAGTGAAATGTACCGTAACTGTTCAGTGATCAAGAGCTTGCGACAGAGCGAAAACCTTCAGCAAGAGCATGATTCAATTGGTTTTGCACAGGTGAAAGATGAACTGTATAGTCAGAGGAAAGCAGTTGTGAAGGTAACCAGCGATAGCATGTGTTCTCTGTGCCGAAAGAAAATAGGGACTAGTGTTTTTGCTGTCTACCCCAACGGGAGCACTCTCGTGCACTTTGTCTGTTTTAAAGATTCTCAAAAAATGAAAGCAGTGACCAAAGGGTCTCAGTTGAGAAAGCGATGA
Protein sequence

>Msa0689760

MVHSAYDSFELVPNFNGKIESIESYGSKLLLGCSDGSLRIYSPETEFSDHSKPYTLEKNLANFAKKPVVSMEVLESRELLLSLSESIAFHRLPSLETIAVITKAKGGRGFVEVKEFGVPDMVKSMSWCGENICLGIRREYVILNASNGALSEVFTSGRLAPPLVVPIPSGELLLGKENIGVFVDQNGKLIPEGRICWSEAPLEVVIQKPYAIALLPRFVEIRSLRQPYPLIQTIVLRNVRHLCQSSNSVILALDNSIQGLFPVPLGAQIVQLTASGNFEEALSLCKLLPPEDSSLRAAKEGSIHIRYAHYLFENGSYEEAVEHFLESQVDITYVLSLYPSIILPKTTIVHEPEKLDIDGDDSYLSRVSSGVSDDMEPLPTDENAALESKKTNHNMLMALIKYLQKKRGNFIEKATAEGTEEVVLDAVGDNYASYNRFKKVNKGRGNISVGSGAREMASILDTALLQALLLTGQSSAALEILRGVNYCDMKICEEILRKGNLNAALLELYKCKSLHRQALELLHKLVEESRSSQSEITQRFKPEDIVEYLKPLCETDPILVLEFSMLVLESCPSQTIELFLSGNIPADMVNSYLKQHSPNMQAKYLELMLAMNENAISGNLQNEMVNIYLSDVLDWHADLNAQQNWDEKTYTPTRKKLLSALEGISGYNPEALLKRLPQDALYEERAILLGKMNQHELALSLYVHKLHVPELALSYCDRVYESMHQPSLKKSSNIYLLLMQIYLNPRKTTASFEMRITNLLSPQNTAISRGSAPSVKSKGGRGSKKIAEIEGAEDTKVSLSSTDSSKSDGDADEFNEGDSTIMLDEVLDLLSRRWDRINGAQALKLLPRETKLQDLQSFLGPLLRKSSEMYRNCSVIKSLRQSENLQQEHDSIGFAQVKDELYSQRKAVVKVTSDSMCSLCRKKIGTSVFAVYPNGSTLVHFVCFKDSQKMKAVTKGSQLRKR*