Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760770 | XP_003612474.1 | 92.448 | 384 | 12 | 2 | 1 | 367 | 1 | 384 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760770 | sp|Q6NMI3|COG6_ARATH | 73.247 | 385 | 80 | 5 | 1 | 367 | 1 | 380 | 0.0 | 537 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760770 | G7K401 | 92.448 | 384 | 12 | 2 | 1 | 367 | 1 | 384 | 0.0 | 711 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002680 | Msa0760770 | 0.806994 | 6.278344e-50 | -8.615850e-47 |
| Msa0003220 | Msa0760770 | 0.854357 | 1.298807e-61 | -8.615850e-47 |
| Msa0003270 | Msa0760770 | 0.831912 | 1.275550e-55 | -8.615850e-47 |
| Msa0010770 | Msa0760770 | 0.807862 | 4.108266e-50 | -8.615850e-47 |
| Msa0035120 | Msa0760770 | 0.833939 | 3.997084e-56 | -8.615850e-47 |
| Msa0041690 | Msa0760770 | 0.829805 | 4.191617e-55 | -8.615850e-47 |
| Msa0047640 | Msa0760770 | 0.869813 | 2.336267e-66 | -8.615850e-47 |
| Msa0054530 | Msa0760770 | 0.855069 | 8.077106e-62 | -8.615850e-47 |
| Msa0054820 | Msa0760770 | 0.806012 | 1.011155e-49 | -8.615850e-47 |
| Msa0064920 | Msa0760770 | 0.839942 | 1.171899e-57 | -8.615850e-47 |
| Msa0074750 | Msa0760770 | 0.821618 | 3.668270e-53 | -8.615850e-47 |
| Msa0080250 | Msa0760770 | 0.823769 | 1.158913e-53 | -8.615850e-47 |
| Msa0089980 | Msa0760770 | 0.844142 | 9.079915e-59 | -8.615850e-47 |
| Msa0090010 | Msa0760770 | 0.841943 | 3.496882e-58 | -8.615850e-47 |
| Msa0090660 | Msa0760770 | 0.811438 | 6.999816e-51 | -8.615850e-47 |
| Msa0091780 | Msa0760770 | 0.840627 | 7.760690e-58 | -8.615850e-47 |
| Msa0092940 | Msa0760770 | 0.800973 | 1.120844e-48 | -8.615850e-47 |
| Msa0096580 | Msa0760770 | 0.802973 | 4.350058e-49 | -8.615850e-47 |
| Msa0116270 | Msa0760770 | 0.806116 | 9.618044e-50 | -8.615850e-47 |
| Msa0116790 | Msa0760770 | 0.822962 | 1.789372e-53 | -8.615850e-47 |
| Msa0119320 | Msa0760770 | 0.801771 | 7.695515e-49 | -8.615850e-47 |
| Msa0608270 | Msa0760770 | 0.838213 | 3.286650e-57 | -8.615850e-47 |
| Msa0615030 | Msa0760770 | 0.805920 | 1.057188e-49 | -8.615850e-47 |
| Msa0615060 | Msa0760770 | 0.834911 | 2.279588e-56 | -8.615850e-47 |
| Msa0626270 | Msa0760770 | 0.858580 | 7.474564e-63 | -8.615850e-47 |
| Msa0626460 | Msa0760770 | 0.808418 | 3.127709e-50 | -8.615850e-47 |
| Msa0628420 | Msa0760770 | 0.800591 | 1.341318e-48 | -8.615850e-47 |
| Msa0628500 | Msa0760770 | 0.808996 | 2.353359e-50 | -8.615850e-47 |
| Msa0648830 | Msa0760770 | 0.842974 | 1.863298e-58 | -8.615850e-47 |
| Msa0664540 | Msa0760770 | 0.828733 | 7.629336e-55 | -8.615850e-47 |
| Msa0687450 | Msa0760770 | 0.819856 | 9.324219e-53 | -8.615850e-47 |
| Msa0689760 | Msa0760770 | 0.853005 | 3.180624e-61 | -8.615850e-47 |
| Msa0691340 | Msa0760770 | 0.853866 | 1.799880e-61 | -8.615850e-47 |
| Msa0698100 | Msa0760770 | 0.841985 | 3.408236e-58 | -8.615850e-47 |
| Msa0705390 | Msa0760770 | 0.815734 | 7.942153e-52 | -8.615850e-47 |
| Msa0711900 | Msa0760770 | 0.816004 | 6.915384e-52 | -8.615850e-47 |
| Msa0716860 | Msa0760770 | 0.853663 | 2.059537e-61 | -8.615850e-47 |
| Msa0743530 | Msa0760770 | 0.816706 | 4.814868e-52 | -8.615850e-47 |
| Msa0749400 | Msa0760770 | 0.858400 | 8.457440e-63 | -8.615850e-47 |
| Msa0750160 | Msa0760770 | 0.809673 | 1.684555e-50 | -8.615850e-47 |
| Msa0757800 | Msa0760770 | 0.839855 | 1.234618e-57 | -8.615850e-47 |
| Msa0760770 | Msa0788120 | 0.808794 | 2.599765e-50 | -8.615850e-47 |
| Msa0760770 | Msa0789560 | 0.872561 | 2.893984e-67 | -8.615850e-47 |
| Msa0760770 | Msa0790410 | 0.831439 | 1.668354e-55 | -8.615850e-47 |
| Msa0760770 | Msa0800700 | 0.810792 | 9.664535e-51 | -8.615850e-47 |
| Msa0760770 | Msa0826510 | 0.815761 | 7.832536e-52 | -8.615850e-47 |
| Msa0760770 | Msa0865620 | 0.819790 | 9.654388e-53 | -8.615850e-47 |
| Msa0760770 | Msa0903780 | 0.803627 | 3.184827e-49 | -8.615850e-47 |
| Msa0760770 | Msa0905590 | 0.802315 | 5.948143e-49 | -8.615850e-47 |
| Msa0760770 | Msa0907850 | 0.807714 | 4.416013e-50 | -8.615850e-47 |
| Msa0760770 | Msa0937430 | 0.812977 | 3.230839e-51 | -8.615850e-47 |
| Msa0760770 | Msa0969330 | 0.820307 | 7.351828e-53 | -8.615850e-47 |
| Msa0760770 | Msa0983770 | 0.801109 | 1.051563e-48 | -8.615850e-47 |
| Msa0760770 | Msa0996020 | 0.826275 | 2.966140e-54 | -8.615850e-47 |
| Msa0760770 | Msa1010070 | 0.803905 | 2.788704e-49 | -8.615850e-47 |
| Msa0760770 | Msa1020940 | 0.845033 | 5.225473e-59 | -8.615850e-47 |
| Msa0760770 | Msa1067140 | 0.844047 | 9.629224e-59 | -8.615850e-47 |
| Msa0760770 | Msa1072600 | 0.863458 | 2.453860e-64 | -8.615850e-47 |
| Msa0760770 | Msa1088410 | 0.832776 | 7.794181e-56 | -8.615850e-47 |
| Msa0760770 | Msa1095790 | 0.901932 | 1.623663e-78 | -8.615850e-47 |
| Msa0760770 | Msa1098890 | 0.827724 | 1.335389e-54 | -8.615850e-47 |
| Msa0760770 | Msa1123350 | 0.809582 | 1.761852e-50 | -8.615850e-47 |
| Msa0760770 | Msa1127430 | 0.821912 | 3.136380e-53 | -8.615850e-47 |
| Msa0760770 | Msa1127540 | 0.841850 | 3.699995e-58 | -8.615850e-47 |
| Msa0760770 | Msa1129690 | 0.809498 | 1.836692e-50 | -8.615850e-47 |
| Msa0760770 | Msa1201640 | 0.859707 | 3.433568e-63 | -8.615850e-47 |
| Msa0760770 | Msa1203400 | 0.809320 | 2.005913e-50 | -8.615850e-47 |
| Msa0760770 | Msa1205480 | 0.803253 | 3.807668e-49 | -8.615850e-47 |
| Msa0760770 | Msa1211340 | 0.853822 | 1.853253e-61 | -8.615850e-47 |
| Msa0760770 | Msa1214320 | 0.813550 | 2.418934e-51 | -8.615850e-47 |
| Msa0760770 | Msa1217670 | 0.850187 | 1.997404e-60 | -8.615850e-47 |
| Msa0760770 | Msa1227320 | 0.833848 | 4.212958e-56 | -8.615850e-47 |
| Msa0760770 | Msa1234390 | 0.810833 | 9.469433e-51 | -8.615850e-47 |
| Msa0760770 | Msa1254620 | 0.860141 | 2.539387e-63 | -8.615850e-47 |
| Msa0760770 | Msa1257070 | 0.800080 | 1.704205e-48 | -8.615850e-47 |
| Msa0760770 | Msa1259640 | 0.859093 | 5.249631e-63 | -8.615850e-47 |
| Msa0760770 | Msa1268680 | 0.807697 | 4.453732e-50 | -8.615850e-47 |
| Msa0760770 | Msa1320820 | 0.813417 | 2.587251e-51 | -8.615850e-47 |
| Msa0760770 | Msa1329790 | 0.856179 | 3.831798e-62 | -8.615850e-47 |
| Msa0760770 | Msa1336040 | 0.801497 | 8.758356e-49 | -8.615850e-47 |
| Msa0760770 | Msa1338250 | 0.803351 | 3.633600e-49 | -8.615850e-47 |
| Msa0760770 | Msa1344310 | 0.810890 | 9.202813e-51 | -8.615850e-47 |
| Msa0760770 | Msa1354200 | 0.830998 | 2.141092e-55 | -8.615850e-47 |
| Msa0760770 | Msa1356610 | 0.804345 | 2.258873e-49 | -8.615850e-47 |
| Msa0760770 | Msa1366550 | 0.820677 | 6.045244e-53 | -8.615850e-47 |
| Msa0760770 | Msa1371520 | 0.802923 | 4.455598e-49 | -8.615850e-47 |
| Msa0760770 | Msa1373820 | 0.800387 | 1.476072e-48 | -8.615850e-47 |
| Msa0760770 | Msa1375110 | 0.815958 | 7.080725e-52 | -8.615850e-47 |
| Msa0760770 | Msa1393820 | 0.865758 | 4.681189e-65 | -8.615850e-47 |
| Msa0760770 | Msa1403560 | 0.801152 | 1.030570e-48 | -8.615850e-47 |
| Msa0760770 | Msa1411500 | 0.806703 | 7.233412e-50 | -8.615850e-47 |
| Msa0760770 | Msa1411950 | 0.818812 | 1.612051e-52 | -8.615850e-47 |
| Msa0760770 | Msa1420250 | 0.853911 | 1.746568e-61 | -8.615850e-47 |
| Msa0760770 | Msa1422430 | 0.814523 | 1.475210e-51 | -8.615850e-47 |
| Msa0760770 | Msa1426910 | 0.859770 | 3.286889e-63 | -8.615850e-47 |
| Msa0760770 | Msa1435260 | 0.837339 | 5.510916e-57 | -8.615850e-47 |
| Msa0760770 | Msa1438520 | 0.803294 | 3.732965e-49 | -8.615850e-47 |
| Msa0760770 | Msa1443310 | 0.865194 | 7.048685e-65 | -8.615850e-47 |
| Msa0760770 | Msa1446780 | 0.816320 | 5.875336e-52 | -8.615850e-47 |
| Msa0760770 | Msa1450720 | 0.832210 | 1.076275e-55 | -8.615850e-47 |
| Msa0760770 | Msa1459910 | 0.827259 | 1.727064e-54 | -8.615850e-47 |
| Msa0760770 | Msa1463030 | 0.813703 | 2.237749e-51 | -8.615850e-47 |
| Msa0760770 | Msa1464370 | 0.817954 | 2.522396e-52 | -8.615850e-47 |
| Msa0760770 | Msa1466590 | 0.800931 | 1.143326e-48 | -8.615850e-47 |
| Msa0760770 | Msa1467000 | 0.817622 | 2.997322e-52 | -8.615850e-47 |
| Msa0125790 | Msa0760770 | 0.801216 | 9.998551e-49 | -8.615850e-47 |
| Msa0126230 | Msa0760770 | 0.807666 | 4.520609e-50 | -8.615850e-47 |
| Msa0131700 | Msa0760770 | 0.824124 | 9.566460e-54 | -8.615850e-47 |
| Msa0133820 | Msa0760770 | 0.813065 | 3.091439e-51 | -8.615850e-47 |
| Msa0137540 | Msa0760770 | 0.838221 | 3.270732e-57 | -8.615850e-47 |
| Msa0138050 | Msa0760770 | 0.805041 | 1.616231e-49 | -8.615850e-47 |
| Msa0138210 | Msa0760770 | 0.828970 | 6.683877e-55 | -8.615850e-47 |
| Msa0138360 | Msa0760770 | 0.802061 | 6.706084e-49 | -8.615850e-47 |
| Msa0138950 | Msa0760770 | 0.806687 | 7.289002e-50 | -8.615850e-47 |
| Msa0141400 | Msa0760770 | 0.813522 | 2.453116e-51 | -8.615850e-47 |
| Msa0143850 | Msa0760770 | 0.804681 | 1.922648e-49 | -8.615850e-47 |
| Msa0144360 | Msa0760770 | 0.800654 | 1.302237e-48 | -8.615850e-47 |
| Msa0144780 | Msa0760770 | 0.834006 | 3.845413e-56 | -8.615850e-47 |
| Msa0146080 | Msa0760770 | 0.820675 | 6.051289e-53 | -8.615850e-47 |
| Msa0177170 | Msa0760770 | 0.806538 | 7.835008e-50 | -8.615850e-47 |
| Msa0183420 | Msa0760770 | 0.819446 | 1.156286e-52 | -8.615850e-47 |
| Msa0188700 | Msa0760770 | 0.829008 | 6.544489e-55 | -8.615850e-47 |
| Msa0194860 | Msa0760770 | 0.825276 | 5.120640e-54 | -8.615850e-47 |
| Msa0194890 | Msa0760770 | 0.806973 | 6.340275e-50 | -8.615850e-47 |
| Msa0225480 | Msa0760770 | 0.800919 | 1.149676e-48 | -8.615850e-47 |
| Msa0231190 | Msa0760770 | 0.825783 | 3.882213e-54 | -8.615850e-47 |
| Msa0236770 | Msa0760770 | 0.832857 | 7.440106e-56 | -8.615850e-47 |
| Msa0379610 | Msa0760770 | 0.817386 | 3.387832e-52 | -8.615850e-47 |
| Msa0395980 | Msa0760770 | 0.834885 | 2.313977e-56 | -8.615850e-47 |
| Msa0402190 | Msa0760770 | 0.805417 | 1.348282e-49 | -8.615850e-47 |
| Msa0410870 | Msa0760770 | 0.811509 | 6.755637e-51 | -8.615850e-47 |
| Msa0423840 | Msa0760770 | 0.828652 | 7.982285e-55 | -8.615850e-47 |
| Msa0431410 | Msa0760770 | 0.805881 | 1.077826e-49 | -8.615850e-47 |
| Msa0440510 | Msa0760770 | 0.814222 | 1.720012e-51 | -8.615850e-47 |
| Msa0446900 | Msa0760770 | 0.800423 | 1.451568e-48 | -8.615850e-47 |
| Msa0468250 | Msa0760770 | 0.815547 | 8.741791e-52 | -8.615850e-47 |
| Msa0473980 | Msa0760770 | 0.801946 | 7.081993e-49 | -8.615850e-47 |
| Msa0240650 | Msa0760770 | 0.854700 | 1.033737e-61 | -8.615850e-47 |
| Msa0241350 | Msa0760770 | 0.806460 | 8.137890e-50 | -8.615850e-47 |
| Msa0244380 | Msa0760770 | 0.811720 | 6.078549e-51 | -8.615850e-47 |
| Msa0244970 | Msa0760770 | 0.819655 | 1.036349e-52 | -8.615850e-47 |
| Msa0260620 | Msa0760770 | 0.801668 | 8.076988e-49 | -8.615850e-47 |
| Msa0270200 | Msa0760770 | 0.817622 | 2.997201e-52 | -8.615850e-47 |
| Msa0270210 | Msa0760770 | 0.802862 | 4.585590e-49 | -8.615850e-47 |
| Msa0279390 | Msa0760770 | 0.861837 | 7.750272e-64 | -8.615850e-47 |
| Msa0280150 | Msa0760770 | 0.816958 | 4.228690e-52 | -8.615850e-47 |
| Msa0302890 | Msa0760770 | 0.823282 | 1.506703e-53 | -8.615850e-47 |
| Msa0304100 | Msa0760770 | 0.840578 | 7.993933e-58 | -8.615850e-47 |
| Msa0305330 | Msa0760770 | 0.812818 | 3.500231e-51 | -8.615850e-47 |
| Msa0307860 | Msa0760770 | 0.855277 | 7.029236e-62 | -8.615850e-47 |
| Msa0312080 | Msa0760770 | 0.803350 | 3.635618e-49 | -8.615850e-47 |
| Msa0318880 | Msa0760770 | 0.858644 | 7.148672e-63 | -8.615850e-47 |
| Msa0322900 | Msa0760770 | 0.811344 | 7.336648e-51 | -8.615850e-47 |
| Msa0323260 | Msa0760770 | 0.804202 | 2.419132e-49 | -8.615850e-47 |
| Msa0358400 | Msa0760770 | 0.827809 | 1.274629e-54 | -8.615850e-47 |
| Msa0362890 | Msa0760770 | 0.835039 | 2.115849e-56 | -8.615850e-47 |
| Msa0363060 | Msa0760770 | 0.807040 | 6.137409e-50 | -8.615850e-47 |
| Msa0363400 | Msa0760770 | 0.839639 | 1.404716e-57 | -8.615850e-47 |
| Msa0483740 | Msa0760770 | 0.825027 | 5.864064e-54 | -8.615850e-47 |
| Msa0491000 | Msa0760770 | 0.817227 | 3.679380e-52 | -8.615850e-47 |
| Msa0510290 | Msa0760770 | 0.829977 | 3.806202e-55 | -8.615850e-47 |
| Msa0511150 | Msa0760770 | 0.813148 | 2.964068e-51 | -8.615850e-47 |
| Msa0513370 | Msa0760770 | 0.801534 | 8.606118e-49 | -8.615850e-47 |
| Msa0516120 | Msa0760770 | 0.810965 | 8.864190e-51 | -8.615850e-47 |
| Msa0518960 | Msa0760770 | 0.835780 | 1.375008e-56 | -8.615850e-47 |
| Msa0527190 | Msa0760770 | 0.801888 | 7.278763e-49 | -8.615850e-47 |
| Msa0531250 | Msa0760770 | 0.815677 | 8.176513e-52 | -8.615850e-47 |
| Msa0544730 | Msa0760770 | 0.849892 | 2.415285e-60 | -8.615850e-47 |
| Msa0547680 | Msa0760770 | 0.824394 | 8.268239e-54 | -8.615850e-47 |
| Msa0553200 | Msa0760770 | 0.804997 | 1.650907e-49 | -8.615850e-47 |
| Msa0572750 | Msa0760770 | 0.825696 | 4.072341e-54 | -8.615850e-47 |
| Msa0594200 | Msa0760770 | 0.809883 | 1.518086e-50 | -8.615850e-47 |
| Msa0597770 | Msa0760770 | 0.818392 | 2.007740e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760770 | MtrunA17_Chr5g0408051 | 92.448 | 384 | 12 | 2 | 1 | 367 | 1 | 384 | 0.0 | 711 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0760770 | AT1G31780.1 | 73.247 | 385 | 80 | 5 | 1 | 367 | 1 | 380 | 0.0 | 537 |
Find 73 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATCCATTCTCAGAGTTAT+TGG | 0.219068 | 5_2:-17389561 | None:intergenic |
| ACAATAATTCAAACCTCTTC+AGG | 0.230873 | 5_2:-17385668 | None:intergenic |
| TTCAGAAGCTCGCCAACTTC+TGG | 0.244564 | 5_2:-17388458 | None:intergenic |
| AAGTGTATTACTGAGTTTAT+AGG | 0.286084 | 5_2:-17389699 | None:intergenic |
| ATCGAGAAACTCGTGATTAA+TGG | 0.304706 | 5_2:-17384005 | None:intergenic |
| TCAGGCTGAATGTAGAAAAC+TGG | 0.356063 | 5_2:+17388421 | Msa0760770:intron |
| TAGAACCTTCTTCAGTTTGC+GGG | 0.374169 | 5_2:-17383861 | None:intergenic |
| ATCTAACGAAGATGCTTCAT+TGG | 0.378558 | 5_2:-17383747 | None:intergenic |
| TGTTCAACTCTCACTTTAAA+CGG | 0.407884 | 5_2:-17389644 | None:intergenic |
| CGATAGTTGATCGGAGGTTA+CGG | 0.412937 | 5_2:-17383967 | None:intergenic |
| GAAGAAGAAGAAGACGAGAA+TGG | 0.413293 | 5_2:+17383805 | Msa0760770:exon |
| TTACAGGATAGCAAAGGCTT+TGG | 0.415391 | 5_2:+17385523 | Msa0760770:intron |
| GCGTGCTGGTTTAGAGCTAA+TGG | 0.418347 | 5_2:+17387294 | Msa0760770:intron |
| TAGTGCATTGTGTCTCATAT+TGG | 0.427619 | 5_2:-17388812 | None:intergenic |
| TGCTTCGCATGCCGCACAAC+TGG | 0.427754 | 5_2:+17384027 | Msa0760770:CDS |
| CTAGAACCTTCTTCAGTTTG+CGG | 0.430631 | 5_2:-17383862 | None:intergenic |
| TATCACCAACATATCGTAAT+GGG | 0.438690 | 5_2:-17388912 | None:intergenic |
| CTGCTCTTTGTAACACACTA+TGG | 0.440851 | 5_2:+17389848 | Msa0760770:CDS |
| GAGTTGATTTGCTGTTGGTC+TGG | 0.443965 | 5_2:-17389537 | None:intergenic |
| TCATGAGCATGCACTTCAAT+AGG | 0.445031 | 5_2:-17388889 | None:intergenic |
| CTGGTATCAACAATTGCATC+TGG | 0.450863 | 5_2:-17389518 | None:intergenic |
| TTCAGTTTGCGGGAAAGTCC+CGG | 0.454139 | 5_2:-17383851 | None:intergenic |
| AAGAAGAAGAAGACGAGAAT+GGG | 0.469945 | 5_2:+17383806 | Msa0760770:exon |
| CTCTCCAATAACTCTGAGAA+TGG | 0.471355 | 5_2:+17389557 | Msa0760770:CDS |
| GACGGTGGCGGGTCTAGCGC+CGG | 0.477065 | 5_2:+17383832 | Msa0760770:CDS |
| AAATTTCATTTGCAGCGTGC+TGG | 0.479981 | 5_2:+17387280 | Msa0760770:intron |
| ACTTTCCCGCAAACTGAAGA+AGG | 0.485016 | 5_2:+17383856 | Msa0760770:CDS |
| AATAACTCTGAGAATGGATC+TGG | 0.488847 | 5_2:+17389563 | Msa0760770:CDS |
| CAATAATTCAAACCTCTTCA+GGG | 0.492787 | 5_2:-17385667 | None:intergenic |
| TTGGAGAGTTGATTTGCTGT+TGG | 0.509101 | 5_2:-17389542 | None:intergenic |
| AGAATGGGAACGACGGTGGC+GGG | 0.515715 | 5_2:+17383821 | Msa0760770:exon |
| GAGCTTATGAGCGCCTATGC+AGG | 0.518385 | 5_2:+17387341 | Msa0760770:CDS |
| ATATCACCAACATATCGTAA+TGG | 0.518994 | 5_2:-17388913 | None:intergenic |
| TTTAGATCTCAGATTTACTT+GGG | 0.527870 | 5_2:+17389818 | Msa0760770:intron |
| GTTGCTTAGGACACATCATC+AGG | 0.527906 | 5_2:+17385867 | Msa0760770:CDS |
| GACACTGACAATCCAGAAGT+TGG | 0.530203 | 5_2:+17388446 | Msa0760770:CDS |
| CACTTGCGGAATGCTGTGAT+AGG | 0.530688 | 5_2:+17384170 | Msa0760770:CDS |
| CCAACTGTAAAGTGTTGCTT+AGG | 0.531460 | 5_2:+17385854 | Msa0760770:CDS |
| TGTGGTACTTATAATGTCAC+TGG | 0.531463 | 5_2:-17385564 | None:intergenic |
| AGTATTCTCGTCGTAGAAAG+AGG | 0.535224 | 5_2:-17383933 | None:intergenic |
| TTTCAAGTATTGTGCAGAAG+AGG | 0.541277 | 5_2:+17388517 | Msa0760770:CDS |
| GAGAATGGGAACGACGGTGG+CGG | 0.542162 | 5_2:+17383820 | Msa0760770:exon |
| TTTAGAGCTAATGGATATGA+TGG | 0.544473 | 5_2:+17387303 | Msa0760770:CDS |
| TTTGGATAGCGTGGAGAATG+AGG | 0.551443 | 5_2:+17384141 | Msa0760770:CDS |
| TTGAGTGAAGATAAGAGATC+CGG | 0.555762 | 5_2:-17383902 | None:intergenic |
| CAGGCTGAATGTAGAAAACT+GGG | 0.556163 | 5_2:+17388422 | Msa0760770:intron |
| GCTCTTACACGTGGAGGACC+TGG | 0.559865 | 5_2:+17388853 | Msa0760770:CDS |
| CGGAGGTTACGGCGAGCTTG+AGG | 0.569536 | 5_2:-17383956 | None:intergenic |
| TTATCAGCTCTCCCCTGAAG+AGG | 0.569618 | 5_2:+17385655 | Msa0760770:CDS |
| ACGGTGGCGGGTCTAGCGCC+GGG | 0.573517 | 5_2:+17383833 | Msa0760770:CDS |
| AACAGCTGTGCGCTACCTCA+GGG | 0.577762 | 5_2:+17388481 | Msa0760770:CDS |
| TTGTTAGGCTTTGGATAGCG+TGG | 0.578669 | 5_2:+17384132 | Msa0760770:intron |
| CCTAAGCAACACTTTACAGT+TGG | 0.583433 | 5_2:-17385854 | None:intergenic |
| TTATAGGAGACTATAAGACT+TGG | 0.588121 | 5_2:-17389683 | None:intergenic |
| AAGTTCTCGTTCAGATGCCA+AGG | 0.594563 | 5_2:-17389477 | None:intergenic |
| AGATGATTCTTCACCTGCAT+AGG | 0.602469 | 5_2:-17387354 | None:intergenic |
| ATAGGTCGAGGCATTCCACC+AGG | 0.608061 | 5_2:-17388871 | None:intergenic |
| TTCTTGTTTGAGCCTCTCTG+TGG | 0.617010 | 5_2:-17385582 | None:intergenic |
| GCATGCACTTCAATAGGTCG+AGG | 0.620723 | 5_2:-17388883 | None:intergenic |
| ATGATGGCGGTGTATCAAGA+AGG | 0.620796 | 5_2:+17387319 | Msa0760770:CDS |
| AATAATTCAAACCTCTTCAG+GGG | 0.629801 | 5_2:-17385666 | None:intergenic |
| TCAAAGATCTGAATCGCGAA+CGG | 0.631791 | 5_2:+17383769 | Msa0760770:five_prime_UTR |
| CTTACACGTGGAGGACCTGG+TGG | 0.634185 | 5_2:+17388856 | Msa0760770:CDS |
| GAATGAGGTGAATTCACTTG+CGG | 0.643635 | 5_2:+17384156 | Msa0760770:CDS |
| GACGAGAATGGGAACGACGG+TGG | 0.653213 | 5_2:+17383817 | Msa0760770:exon |
| TTTATAAGTGCTCTTACACG+TGG | 0.662487 | 5_2:+17388844 | Msa0760770:CDS |
| AGAATCTCGAATCGATACAC+CGG | 0.663325 | 5_2:+17383883 | Msa0760770:CDS |
| ATAAGTGCTCTTACACGTGG+AGG | 0.664709 | 5_2:+17388847 | Msa0760770:CDS |
| AAGAGGAATTACCAGTTGTG+CGG | 0.672284 | 5_2:-17384038 | None:intergenic |
| GAAGACGAGAATGGGAACGA+CGG | 0.707972 | 5_2:+17383814 | Msa0760770:exon |
| AGAGCTAATGGATATGATGG+CGG | 0.714793 | 5_2:+17387306 | Msa0760770:CDS |
| ACATTATAAGTACCACAGAG+AGG | 0.748544 | 5_2:+17385570 | Msa0760770:CDS |
| AAAGAACAGATCTTTCCCTG+AGG | 0.759398 | 5_2:-17388496 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAATTGCTATATTTT+GGG | + | chr5_2:17384854-17384873 | Msa0760770:intron | 10.0% |
| !! | ATGTTAAATTAAAAATTAGA+TGG | - | chr5_2:17389363-17389382 | None:intergenic | 10.0% |
| !!! | GTATTTTAATTGCTATATTT+TGG | + | chr5_2:17384853-17384872 | Msa0760770:intron | 15.0% |
| !!! | AAGATCTTTGAATAAAATTT+TGG | + | chr5_2:17385487-17385506 | Msa0760770:intron | 15.0% |
| !!! | AGATCTTTGAATAAAATTTT+GGG | + | chr5_2:17385488-17385507 | Msa0760770:intron | 15.0% |
| !!! | CAAATTTTGAAATATCATTA+GGG | + | chr5_2:17386033-17386052 | Msa0760770:intron | 15.0% |
| !! | AAAATTACTCTAAATTAATG+TGG | + | chr5_2:17386496-17386515 | Msa0760770:intron | 15.0% |
| !! | ACGGAAATTAAAAAAAAAAA+TGG | + | chr5_2:17386833-17386852 | Msa0760770:intron | 15.0% |
| !! | AAATGGAAAATATATATCTT+TGG | - | chr5_2:17387499-17387518 | None:intergenic | 15.0% |
| !!! | AAACAAAATTGAATTGATTT+GGG | - | chr5_2:17387998-17388017 | None:intergenic | 15.0% |
| !! | AAAACAAAATTGAATTGATT+TGG | - | chr5_2:17387999-17388018 | None:intergenic | 15.0% |
| !! | AATCATTCATTCAATAAAAT+TGG | - | chr5_2:17389215-17389234 | None:intergenic | 15.0% |
| !! | ATGGATAAATAAATAAATAG+GGG | - | chr5_2:17389344-17389363 | None:intergenic | 15.0% |
| !! | GATGGATAAATAAATAAATA+GGG | - | chr5_2:17389345-17389364 | None:intergenic | 15.0% |
| !! | AGATGGATAAATAAATAAAT+AGG | - | chr5_2:17389346-17389365 | None:intergenic | 15.0% |
| !!! | ACATTTTTTGATATTTTGAA+AGG | + | chr5_2:17389895-17389914 | Msa0760770:three_prime_UTR | 15.0% |
| !!! | TTTCACTGAAAATGTTTTTA+TGG | + | chr5_2:17384347-17384366 | Msa0760770:intron | 20.0% |
| !!! | AGACAATTTTTACTATCAAA+AGG | - | chr5_2:17385423-17385442 | None:intergenic | 20.0% |
| !! | TAGAATTGCACATATAATAT+GGG | - | chr5_2:17385916-17385935 | None:intergenic | 20.0% |
| !! | TTAGAATTGCACATATAATA+TGG | - | chr5_2:17385917-17385936 | None:intergenic | 20.0% |
| !!! | TCATAATCAAATTGGTATTT+TGG | - | chr5_2:17385969-17385988 | None:intergenic | 20.0% |
| !! | AAGTAAACTCATAATCAAAT+TGG | - | chr5_2:17385977-17385996 | None:intergenic | 20.0% |
| !!! | GCAAATTTTGAAATATCATT+AGG | + | chr5_2:17386032-17386051 | Msa0760770:intron | 20.0% |
| !! | AAATCATGAATAAAGAATAC+AGG | - | chr5_2:17386184-17386203 | None:intergenic | 20.0% |
| !!! | TATTCTAATTTGATGATTGT+GGG | - | chr5_2:17386547-17386566 | None:intergenic | 20.0% |
| !!! | ATATTCTAATTTGATGATTG+TGG | - | chr5_2:17386548-17386567 | None:intergenic | 20.0% |
| !!! | TTTTACAGTATATTGACTTA+CGG | - | chr5_2:17386577-17386596 | None:intergenic | 20.0% |
| !!! | GTTATTCTATTTTTTTGTCT+AGG | + | chr5_2:17387049-17387068 | Msa0760770:intron | 20.0% |
| !!! | AGAACTTTAAGAATATCAAA+TGG | - | chr5_2:17387516-17387535 | None:intergenic | 20.0% |
| !! | ATGAATATACATGAATGTTA+TGG | + | chr5_2:17388255-17388274 | Msa0760770:intron | 20.0% |
| !! | TGAATATACATGAATGTTAT+GGG | + | chr5_2:17388256-17388275 | Msa0760770:intron | 20.0% |
| !! | AAATATCTTCAACTGAAATA+TGG | - | chr5_2:17388600-17388619 | None:intergenic | 20.0% |
| !! | TACATCTTAAATATAAACCA+TGG | - | chr5_2:17389018-17389037 | None:intergenic | 20.0% |
| !!! | ATGGTTTATATTTAAGATGT+AGG | + | chr5_2:17389017-17389036 | Msa0760770:intron | 20.0% |
| !!! | TGGTTTATATTTAAGATGTA+GGG | + | chr5_2:17389018-17389037 | Msa0760770:intron | 20.0% |
| !!! | CTTTTTTTGAATTGTGATAA+TGG | + | chr5_2:17389076-17389095 | Msa0760770:intron | 20.0% |
| !! | TGGATAAATAAATAAATAGG+GGG | - | chr5_2:17389343-17389362 | None:intergenic | 20.0% |
| !! | AAAATATATCTCCTGATATT+TGG | - | chr5_2:17389408-17389427 | None:intergenic | 20.0% |
| !! | TTAAGGATTACTAATATAGT+GGG | - | chr5_2:17389767-17389786 | None:intergenic | 20.0% |
| !! | ATTAAGGATTACTAATATAG+TGG | - | chr5_2:17389768-17389787 | None:intergenic | 20.0% |
| !! | CGTCAAGATTAATAAAATTA+AGG | - | chr5_2:17389784-17389803 | None:intergenic | 20.0% |
| !!! | TTTGATGTGTTTGATTTGTT+AGG | + | chr5_2:17384117-17384136 | Msa0760770:intron | 25.0% |
| ! | ACTGTAATTCGTTATTTGTT+TGG | + | chr5_2:17384229-17384248 | Msa0760770:intron | 25.0% |
| !! | TTATTTTCTGTGATTAGAGT+TGG | + | chr5_2:17384308-17384327 | Msa0760770:intron | 25.0% |
| ! | AACAGTTATTCAAAACAAGT+AGG | + | chr5_2:17384590-17384609 | Msa0760770:intron | 25.0% |
| !!! | TTTTTTTTGTCCAAGTTAAG+AGG | + | chr5_2:17384636-17384655 | Msa0760770:intron | 25.0% |
| !!! | TTTAGAGTGAAGTTTGTTTT+TGG | + | chr5_2:17384766-17384785 | Msa0760770:intron | 25.0% |
| ! | AAGGAAAATAATGCATTTAG+AGG | + | chr5_2:17384894-17384913 | Msa0760770:intron | 25.0% |
| !!! | ATGAAACATTTTTTCATCTG+CGG | - | chr5_2:17385000-17385019 | None:intergenic | 25.0% |
| ! | TGAAAAAATGTTTCATTTGC+TGG | + | chr5_2:17385004-17385023 | Msa0760770:intron | 25.0% |
| ! | TTGCTGGAAATAAGTTAAAA+AGG | + | chr5_2:17385020-17385039 | Msa0760770:intron | 25.0% |
| ! | TTAAAAAGGATACTGTTGTT+GGG | + | chr5_2:17385034-17385053 | Msa0760770:intron | 25.0% |
| !!! | TGGCATAACTTTTTCAATTT+TGG | + | chr5_2:17385294-17385313 | Msa0760770:intron | 25.0% |
| !! | TAGTTTTCTAAATCATGTTC+TGG | + | chr5_2:17385342-17385361 | Msa0760770:intron | 25.0% |
| !! | TTTTGTTCTTTCAATGAGAA+TGG | + | chr5_2:17385443-17385462 | Msa0760770:intron | 25.0% |
| !!! | TGGGTTCTATATTTTTTTAC+AGG | + | chr5_2:17385507-17385526 | Msa0760770:intron | 25.0% |
| !!! | ATTTTTTTACAGGATAGCAA+AGG | + | chr5_2:17385517-17385536 | Msa0760770:intron | 25.0% |
| !!! | TCTGAATGAAAACTTTTTCA+AGG | + | chr5_2:17385804-17385823 | Msa0760770:CDS | 25.0% |
| ! | AGAATTGCACATATAATATG+GGG | - | chr5_2:17385915-17385934 | None:intergenic | 25.0% |
| ! | TGATTATGAGTTTACTTAAG+TGG | + | chr5_2:17385980-17385999 | Msa0760770:intron | 25.0% |
| ! | CAATTACACAAGAATATCTA+TGG | - | chr5_2:17386103-17386122 | None:intergenic | 25.0% |
| ! | CATAGATATTCTTGTGTAAT+TGG | + | chr5_2:17386101-17386120 | Msa0760770:intron | 25.0% |
| ! | GGATCAAAATGAAAATCTAA+TGG | + | chr5_2:17386148-17386167 | Msa0760770:intron | 25.0% |
| !! | ATTCTAATTTGATGATTGTG+GGG | - | chr5_2:17386546-17386565 | None:intergenic | 25.0% |
| ! | TAAAAAGTAATCTAATGTGC+AGG | + | chr5_2:17386592-17386611 | Msa0760770:intron | 25.0% |
| ! | GCTATTCTCAAGAAAAAATA+AGG | - | chr5_2:17386665-17386684 | None:intergenic | 25.0% |
| ! | TTAATTCTCTCTCTCTTAAA+GGG | - | chr5_2:17386906-17386925 | None:intergenic | 25.0% |
| ! | ATTAATTCTCTCTCTCTTAA+AGG | - | chr5_2:17386907-17386926 | None:intergenic | 25.0% |
| ! | GACAAAAAAATAGAATAACC+TGG | - | chr5_2:17387048-17387067 | None:intergenic | 25.0% |
| !! | TTCCTTTTGCATCAAAATTT+TGG | + | chr5_2:17387164-17387183 | Msa0760770:intron | 25.0% |
| ! | ATAAAGTAGAAGGTAAGTAT+GGG | - | chr5_2:17387223-17387242 | None:intergenic | 25.0% |
| !! | TTTTAAGCTGATAAAGTAGA+AGG | - | chr5_2:17387233-17387252 | None:intergenic | 25.0% |
| !! | ATTGTAACTTTTACTGAACT+CGG | + | chr5_2:17387257-17387276 | Msa0760770:intron | 25.0% |
| !! | ACCTAATGAACAGTTTATTT+TGG | + | chr5_2:17387591-17387610 | Msa0760770:intron | 25.0% |
| !!! | TAGGTTATTTTTGGTTGAAA+GGG | + | chr5_2:17387928-17387947 | Msa0760770:intron | 25.0% |
| !!! | AAATCAAGAAAGTCTTGTTT+TGG | + | chr5_2:17388078-17388097 | Msa0760770:intron | 25.0% |
| ! | AGAAACAATTAATACTCTCT+GGG | - | chr5_2:17388104-17388123 | None:intergenic | 25.0% |
| !! | ATTTTACTCATAATTGGTGA+GGG | - | chr5_2:17388324-17388343 | None:intergenic | 25.0% |
| !! | ATCGAGATTTTACTCATAAT+TGG | - | chr5_2:17388330-17388349 | None:intergenic | 25.0% |
| ! | TACTTATAGTCTTTACATCT+AGG | + | chr5_2:17388393-17388412 | Msa0760770:intron | 25.0% |
| !!! | AATATTAACCATTCGAGTTT+TGG | + | chr5_2:17388572-17388591 | Msa0760770:intron | 25.0% |
| ! | GTTGAAGATATTTCATATTC+TGG | + | chr5_2:17388607-17388626 | Msa0760770:intron | 25.0% |
| ! | GTACATATTATCTGTTATCA+TGG | + | chr5_2:17388629-17388648 | Msa0760770:intron | 25.0% |
| ! | ATATTATCTGTTATCATGGA+TGG | + | chr5_2:17388633-17388652 | Msa0760770:intron | 25.0% |
| ! | TCTAGTATTCGTACAAAATA+TGG | - | chr5_2:17389129-17389148 | None:intergenic | 25.0% |
| !!! | ATATATTTATTTCTGCTTGC+AGG | + | chr5_2:17389454-17389473 | Msa0760770:intron | 25.0% |
| ! | AAGTGTATTACTGAGTTTAT+AGG | - | chr5_2:17389702-17389721 | None:intergenic | 25.0% |
| ! | TAAGGATTACTAATATAGTG+GGG | - | chr5_2:17389766-17389785 | None:intergenic | 25.0% |
| !! | TTTTAGATCTCAGATTTACT+TGG | + | chr5_2:17389817-17389836 | Msa0760770:intron | 25.0% |
| ! | TTTAGATCTCAGATTTACTT+GGG | + | chr5_2:17389818-17389837 | Msa0760770:intron | 25.0% |
| ! | TCTGAAATGTTGTTAACTGA+AGG | + | chr5_2:17384285-17384304 | Msa0760770:intron | 30.0% |
| ! | AGATCATGTGTAATTTTGCA+TGG | + | chr5_2:17384481-17384500 | Msa0760770:intron | 30.0% |
| TAAATGCTTGTTCGGTTTAT+TGG | + | chr5_2:17384704-17384723 | Msa0760770:intron | 30.0% | |
| !!! | AGTTTGTTTTTGGAAATTGC+TGG | + | chr5_2:17384776-17384795 | Msa0760770:intron | 30.0% |
| GCAGTTTCTCAATTATGTTA+TGG | - | chr5_2:17384826-17384845 | None:intergenic | 30.0% | |
| AACATAATTGAGAAACTGCA+TGG | + | chr5_2:17384827-17384846 | Msa0760770:intron | 30.0% | |
| !!! | ATTTTGGGATTGTAAAATGC+AGG | + | chr5_2:17384869-17384888 | Msa0760770:intron | 30.0% |
| GTTAAAAAGGATACTGTTGT+TGG | + | chr5_2:17385033-17385052 | Msa0760770:intron | 30.0% | |
| ! | GTGATTTGGCTGAAATTATT+AGG | + | chr5_2:17385164-17385183 | Msa0760770:intron | 30.0% |
| TGATTTATGTATTTAGTGCG+AGG | + | chr5_2:17385268-17385287 | Msa0760770:intron | 30.0% | |
| AATAATTCAAACCTCTTCAG+GGG | - | chr5_2:17385669-17385688 | None:intergenic | 30.0% | |
| CAATAATTCAAACCTCTTCA+GGG | - | chr5_2:17385670-17385689 | None:intergenic | 30.0% | |
| ACAATAATTCAAACCTCTTC+AGG | - | chr5_2:17385671-17385690 | None:intergenic | 30.0% | |
| TATTTGATTCACAAAGCCAT+GGG | - | chr5_2:17385716-17385735 | None:intergenic | 30.0% | |
| TTATTTGATTCACAAAGCCA+TGG | - | chr5_2:17385717-17385736 | None:intergenic | 30.0% | |
| GAATTGCACATATAATATGG+GGG | - | chr5_2:17385914-17385933 | None:intergenic | 30.0% | |
| !! | CTAAGTTCTAGATATAACAC+AGG | - | chr5_2:17386075-17386094 | None:intergenic | 30.0% |
| ! | TTCTAATTTGATGATTGTGG+GGG | - | chr5_2:17386545-17386564 | None:intergenic | 30.0% |
| AGAAAAGAATTTAGCCAACA+GGG | - | chr5_2:17386739-17386758 | None:intergenic | 30.0% | |
| AAGAAAAGAATTTAGCCAAC+AGG | - | chr5_2:17386740-17386759 | None:intergenic | 30.0% | |
| ! | TTGGCTAAATTCTTTTCTTG+AGG | + | chr5_2:17386741-17386760 | Msa0760770:intron | 30.0% |
| TATCTCTGTCCTTAAACATA+GGG | + | chr5_2:17386789-17386808 | Msa0760770:intron | 30.0% | |
| CTTAGAATAAGTGCTATGAT+AGG | - | chr5_2:17386939-17386958 | None:intergenic | 30.0% | |
| CTATCATAGCACTTATTCTA+AGG | + | chr5_2:17386937-17386956 | Msa0760770:intron | 30.0% | |
| !! | ATAGCACTTATTCTAAGGTA+AGG | + | chr5_2:17386942-17386961 | Msa0760770:intron | 30.0% |
| TACAATAGATAGATCTGCAA+TGG | + | chr5_2:17386977-17386996 | Msa0760770:intron | 30.0% | |
| ACAATAGATAGATCTGCAAT+GGG | + | chr5_2:17386978-17386997 | Msa0760770:intron | 30.0% | |
| !! | AGCCAAAATTTTGATGCAAA+AGG | - | chr5_2:17387169-17387188 | None:intergenic | 30.0% |
| GATAAAGTAGAAGGTAAGTA+TGG | - | chr5_2:17387224-17387243 | None:intergenic | 30.0% | |
| ! | TTTAGAGCTAATGGATATGA+TGG | + | chr5_2:17387303-17387322 | Msa0760770:CDS | 30.0% |
| ATCATCTACTTAAGCTCATA+TGG | + | chr5_2:17387370-17387389 | Msa0760770:intron | 30.0% | |
| TCTTTCTATTGAGATCTGAT+TGG | + | chr5_2:17387545-17387564 | Msa0760770:intron | 30.0% | |
| GCCAAAATAAACTGTTCATT+AGG | - | chr5_2:17387595-17387614 | None:intergenic | 30.0% | |
| ! | TGCAGAAAACAATTTTGCAT+GGG | - | chr5_2:17387633-17387652 | None:intergenic | 30.0% |
| ! | ATGCAGAAAACAATTTTGCA+TGG | - | chr5_2:17387634-17387653 | None:intergenic | 30.0% |
| ! | AATTGTTTTCTGCATTGAGT+CGG | + | chr5_2:17387639-17387658 | Msa0760770:intron | 30.0% |
| CTTTCAACCAAAAATAACCT+AGG | - | chr5_2:17387929-17387948 | None:intergenic | 30.0% | |
| !!! | CTAGGTTATTTTTGGTTGAA+AGG | + | chr5_2:17387927-17387946 | Msa0760770:intron | 30.0% |
| ! | GTTTTTACTTCTTTAGCCAT+TGG | + | chr5_2:17388014-17388033 | Msa0760770:intron | 30.0% |
| GAGAAACAATTAATACTCTC+TGG | - | chr5_2:17388105-17388124 | None:intergenic | 30.0% | |
| ! | GATTTTACTCATAATTGGTG+AGG | - | chr5_2:17388325-17388344 | None:intergenic | 30.0% |
| TTATAGTCTTTACATCTAGG+TGG | + | chr5_2:17388396-17388415 | Msa0760770:intron | 30.0% | |
| TATAGTCTTTACATCTAGGT+GGG | + | chr5_2:17388397-17388416 | Msa0760770:intron | 30.0% | |
| TTATCATAGTCACCATTAGA+TGG | - | chr5_2:17388663-17388682 | None:intergenic | 30.0% | |
| ! | AATTTTCTTACCAATTCTGC+AGG | + | chr5_2:17388786-17388805 | Msa0760770:intron | 30.0% |
| TATCACCAACATATCGTAAT+GGG | - | chr5_2:17388915-17388934 | None:intergenic | 30.0% | |
| ATATCACCAACATATCGTAA+TGG | - | chr5_2:17388916-17388935 | None:intergenic | 30.0% | |
| GTGGTTAGTAAAAACAAACA+AGG | - | chr5_2:17389154-17389173 | None:intergenic | 30.0% | |
| ! | TCCTTTCACACAATATCTTT+TGG | + | chr5_2:17389289-17389308 | Msa0760770:intron | 30.0% |
| TCCAAAAGATATTGTGTGAA+AGG | - | chr5_2:17389293-17389312 | None:intergenic | 30.0% | |
| TAAGATGCAATCCAAATATC+AGG | + | chr5_2:17389394-17389413 | Msa0760770:intron | 30.0% | |
| ! | GTTCTTGATAGAATTTTCGA+AGG | + | chr5_2:17389611-17389630 | Msa0760770:CDS | 30.0% |
| TGTTCAACTCTCACTTTAAA+CGG | - | chr5_2:17389647-17389666 | None:intergenic | 30.0% | |
| TTATAGGAGACTATAAGACT+TGG | - | chr5_2:17389686-17389705 | None:intergenic | 30.0% | |
| AAAATAGAGATGACAACTCA+CGG | - | chr5_2:17389741-17389760 | None:intergenic | 30.0% | |
| AAGGATTACTAATATAGTGG+GGG | - | chr5_2:17389765-17389784 | None:intergenic | 30.0% | |
| TTAATCTTGACGACTTCTTA+TGG | + | chr5_2:17389792-17389811 | Msa0760770:intron | 30.0% | |
| ATCTAACGAAGATGCTTCAT+TGG | - | chr5_2:17383750-17383769 | None:intergenic | 35.0% | |
| AAGAAGAAGAAGACGAGAAT+GGG | + | chr5_2:17383806-17383825 | Msa0760770:exon | 35.0% | |
| TTGAGTGAAGATAAGAGATC+CGG | - | chr5_2:17383905-17383924 | None:intergenic | 35.0% | |
| ! | AACGCTTTTCGATAGTTGAT+CGG | - | chr5_2:17383979-17383998 | None:intergenic | 35.0% |
| ATCGAGAAACTCGTGATTAA+TGG | - | chr5_2:17384008-17384027 | None:intergenic | 35.0% | |
| ACTGAACTAAATGCATGAAG+AGG | - | chr5_2:17384058-17384077 | None:intergenic | 35.0% | |
| TTCTAAATTCTGATCCGATC+TGG | + | chr5_2:17384089-17384108 | Msa0760770:intron | 35.0% | |
| !! | GTGTTTGATTTGTTAGGCTT+TGG | + | chr5_2:17384123-17384142 | Msa0760770:intron | 35.0% |
| ! | TGTGTAATTTTGCATGGAAG+TGG | + | chr5_2:17384487-17384506 | Msa0760770:intron | 35.0% |
| GCATGGAAGTGGAAAAATTA+TGG | + | chr5_2:17384498-17384517 | Msa0760770:intron | 35.0% | |
| TGGAAGTGGAAAAATTATGG+CGG | + | chr5_2:17384501-17384520 | Msa0760770:intron | 35.0% | |
| !! | AGTGTCGATAAATGCTTGTT+CGG | + | chr5_2:17384696-17384715 | Msa0760770:intron | 35.0% |
| !! | CATCTATAATAAGAGGCATC+GGG | - | chr5_2:17384973-17384992 | None:intergenic | 35.0% |
| ! | GCATCTATAATAAGAGGCAT+CGG | - | chr5_2:17384974-17384993 | None:intergenic | 35.0% |
| !!! | AACATTTTTTCATCTGCGGA+AGG | - | chr5_2:17384996-17385015 | None:intergenic | 35.0% |
| TCACTTAATACGATGTTCTC+TGG | + | chr5_2:17385131-17385150 | Msa0760770:intron | 35.0% | |
| GATGTTCTCTGGATTATAGT+GGG | + | chr5_2:17385142-17385161 | Msa0760770:intron | 35.0% | |
| TGTGGTACTTATAATGTCAC+TGG | - | chr5_2:17385567-17385586 | None:intergenic | 35.0% | |
| ACATTATAAGTACCACAGAG+AGG | + | chr5_2:17385570-17385589 | Msa0760770:CDS | 35.0% | |
| ! | TTTTACCTGTTATTGACCCA+TGG | + | chr5_2:17385697-17385716 | Msa0760770:intron | 35.0% |
| ATATAATATGGGGGATAGAG+AGG | - | chr5_2:17385905-17385924 | None:intergenic | 35.0% | |
| TGGATTGAGAGTCTAGATTT+CGG | - | chr5_2:17385949-17385968 | None:intergenic | 35.0% | |
| TCTTGTGTAATTGGAGAAGA+AGG | + | chr5_2:17386110-17386129 | Msa0760770:intron | 35.0% | |
| TGTAATTGGAGAAGAAGGTT+TGG | + | chr5_2:17386115-17386134 | Msa0760770:intron | 35.0% | |
| TTTCGCATCAGTTAATCCTT+AGG | + | chr5_2:17386201-17386220 | Msa0760770:intron | 35.0% | |
| CTCAAGTAAACTTGTGACTT+AGG | - | chr5_2:17386290-17386309 | None:intergenic | 35.0% | |
| ! | ATGGCTAGTAATAATGGAAG+TGG | - | chr5_2:17386320-17386339 | None:intergenic | 35.0% |
| CCAACAATGGCTAGTAATAA+TGG | - | chr5_2:17386326-17386345 | None:intergenic | 35.0% | |
| CCATTATTACTAGCCATTGT+TGG | + | chr5_2:17386323-17386342 | Msa0760770:intron | 35.0% | |
| AACCTCTTTCAAACCAACAA+TGG | - | chr5_2:17386339-17386358 | None:intergenic | 35.0% | |
| TGACACTATCCACATAAATG+TGG | - | chr5_2:17386463-17386482 | None:intergenic | 35.0% | |
| CTATCTCTGTCCTTAAACAT+AGG | + | chr5_2:17386788-17386807 | Msa0760770:intron | 35.0% | |
| ATAGATCTCATGCAATAGCA+GGG | - | chr5_2:17387021-17387040 | None:intergenic | 35.0% | |
| TATAGATCTCATGCAATAGC+AGG | - | chr5_2:17387022-17387041 | None:intergenic | 35.0% | |
| ! | GCTTTGTATTGATCTTGTTC+TGG | + | chr5_2:17387186-17387205 | Msa0760770:intron | 35.0% |
| ! | AATTTTGCATGGGATCTGAT+TGG | - | chr5_2:17387623-17387642 | None:intergenic | 35.0% |
| AATTTGGATAGGCAATACAC+AGG | - | chr5_2:17387869-17387888 | None:intergenic | 35.0% | |
| ! | AGAGAGTAATATTGGGTTGT+GGG | + | chr5_2:17387972-17387991 | Msa0760770:intron | 35.0% |
| TTTACTTCTTTAGCCATTGG+AGG | + | chr5_2:17388017-17388036 | Msa0760770:intron | 35.0% | |
| ! | TTTCAAGTATTGTGCAGAAG+AGG | + | chr5_2:17388517-17388536 | Msa0760770:CDS | 35.0% |
| ATATGGAACCAAAACTCGAA+TGG | - | chr5_2:17388583-17388602 | None:intergenic | 35.0% | |
| TAGTGCATTGTGTCTCATAT+TGG | - | chr5_2:17388815-17388834 | None:intergenic | 35.0% | |
| TTTATAAGTGCTCTTACACG+TGG | + | chr5_2:17388844-17388863 | Msa0760770:CDS | 35.0% | |
| !! | CGATATGTTGGTGATATGTT+AGG | + | chr5_2:17388919-17388938 | Msa0760770:intron | 35.0% |
| GGTTTGTCATGAAAACCTTA+TGG | + | chr5_2:17388954-17388973 | Msa0760770:intron | 35.0% | |
| !! | CTTTGAAGCATTCATCCATA+AGG | - | chr5_2:17388972-17388991 | None:intergenic | 35.0% |
| ! | GATGTAGGGTACTTAAATAC+AGG | + | chr5_2:17389032-17389051 | Msa0760770:intron | 35.0% |
| TACTTAAATACAGGCGGAAA+GGG | + | chr5_2:17389041-17389060 | Msa0760770:intron | 35.0% | |
| ! | TTTTACTAACCACACAAGAG+AGG | + | chr5_2:17389161-17389180 | Msa0760770:intron | 35.0% |
| AAGGAGAAATCCTTTGTGAA+GGG | - | chr5_2:17389274-17389293 | None:intergenic | 35.0% | |
| AAAGGAGAAATCCTTTGTGA+AGG | - | chr5_2:17389275-17389294 | None:intergenic | 35.0% | |
| AGATCCATTCTCAGAGTTAT+TGG | - | chr5_2:17389564-17389583 | None:intergenic | 35.0% | |
| ! | AATAACTCTGAGAATGGATC+TGG | + | chr5_2:17389563-17389582 | Msa0760770:CDS | 35.0% |
| !! | GAATTTTCGAAGGAGTATGT+CGG | + | chr5_2:17389621-17389640 | Msa0760770:CDS | 35.0% |
| !! | TTTGATATTTTGAAAGGCCG+CGG | + | chr5_2:17389901-17389920 | Msa0760770:three_prime_UTR | 35.0% |
| TCAAAGATCTGAATCGCGAA+CGG | + | chr5_2:17383769-17383788 | Msa0760770:five_prime_UTR | 40.0% | |
| GAAGAAGAAGAAGACGAGAA+TGG | + | chr5_2:17383805-17383824 | Msa0760770:exon | 40.0% | |
| TAGAACCTTCTTCAGTTTGC+GGG | - | chr5_2:17383864-17383883 | None:intergenic | 40.0% | |
| CTAGAACCTTCTTCAGTTTG+CGG | - | chr5_2:17383865-17383884 | None:intergenic | 40.0% | |
| AGAATCTCGAATCGATACAC+CGG | + | chr5_2:17383883-17383902 | Msa0760770:CDS | 40.0% | |
| AGTATTCTCGTCGTAGAAAG+AGG | - | chr5_2:17383936-17383955 | None:intergenic | 40.0% | |
| AAGAGGAATTACCAGTTGTG+CGG | - | chr5_2:17384041-17384060 | None:intergenic | 40.0% | |
| AATTCTGATCCGATCTGGTT+CGG | + | chr5_2:17384094-17384113 | Msa0760770:intron | 40.0% | |
| GAATGAGGTGAATTCACTTG+CGG | + | chr5_2:17384156-17384175 | Msa0760770:CDS | 40.0% | |
| GGAAGTGGAAAAATTATGGC+GGG | + | chr5_2:17384502-17384521 | Msa0760770:intron | 40.0% | |
| GGATTGTAAAATGCAGGTGA+AGG | + | chr5_2:17384875-17384894 | Msa0760770:intron | 40.0% | |
| !! | CGGAAGGCATCTATAATAAG+AGG | - | chr5_2:17384980-17384999 | None:intergenic | 40.0% |
| CGATGTTCTCTGGATTATAG+TGG | + | chr5_2:17385141-17385160 | Msa0760770:intron | 40.0% | |
| !! | CTGGATTATAGTGGGTGATT+TGG | + | chr5_2:17385150-17385169 | Msa0760770:intron | 40.0% |
| AGCACGCTAAATTATGCAGA+AGG | + | chr5_2:17385190-17385209 | Msa0760770:intron | 40.0% | |
| CTCGAACATGCTAGATACTA+TGG | - | chr5_2:17385221-17385240 | None:intergenic | 40.0% | |
| ! | TGTTCTGGTTAGCACTTAGT+TGG | + | chr5_2:17385357-17385376 | Msa0760770:intron | 40.0% |
| ! | GTTCTGGTTAGCACTTAGTT+GGG | + | chr5_2:17385358-17385377 | Msa0760770:intron | 40.0% |
| ! | TTCTGGTTAGCACTTAGTTG+GGG | + | chr5_2:17385359-17385378 | Msa0760770:intron | 40.0% |
| TTACAGGATAGCAAAGGCTT+TGG | + | chr5_2:17385523-17385542 | Msa0760770:intron | 40.0% | |
| CCTAAGCAACACTTTACAGT+TGG | - | chr5_2:17385857-17385876 | None:intergenic | 40.0% | |
| !! | CCAACTGTAAAGTGTTGCTT+AGG | + | chr5_2:17385854-17385873 | Msa0760770:CDS | 40.0% |
| GAGTCTAGATTTCGGATATC+AGG | - | chr5_2:17385941-17385960 | None:intergenic | 40.0% | |
| AATCCTTAGGCCAGAAATGA+TGG | + | chr5_2:17386214-17386233 | Msa0760770:intron | 40.0% | |
| CTAACCAGTACCATCATTTC+TGG | - | chr5_2:17386227-17386246 | None:intergenic | 40.0% | |
| AAATCCTAAAGTCGCTGTTC+AGG | - | chr5_2:17386262-17386281 | None:intergenic | 40.0% | |
| !! | AGCCATTGTTGGTTTGAAAG+AGG | + | chr5_2:17386334-17386353 | Msa0760770:intron | 40.0% |
| ATAGTGCCAGTCTCAAAACA+AGG | + | chr5_2:17386375-17386394 | Msa0760770:intron | 40.0% | |
| !!! | TGTGATCCTTGTTTTGAGAC+TGG | - | chr5_2:17386384-17386403 | None:intergenic | 40.0% |
| GTCTCAAAACAAGGATCACA+AGG | + | chr5_2:17386384-17386403 | Msa0760770:intron | 40.0% | |
| CAGTTATCCTAGAGATCACT+TGG | - | chr5_2:17386429-17386448 | None:intergenic | 40.0% | |
| !! | CAAGTGATCTCTAGGATAAC+TGG | + | chr5_2:17386427-17386446 | Msa0760770:intron | 40.0% |
| AGAAAGAGGCCACATTTATG+TGG | + | chr5_2:17386451-17386470 | Msa0760770:intron | 40.0% | |
| TATATTTAGGGACGGAGAGT+CGG | - | chr5_2:17386713-17386732 | None:intergenic | 40.0% | |
| CCAACAGGGTCCTATATTTA+GGG | - | chr5_2:17386725-17386744 | None:intergenic | 40.0% | |
| TCTGTCCTTAAACATAGGGT+GGG | + | chr5_2:17386793-17386812 | Msa0760770:intron | 40.0% | |
| AATTTCCGTAATTCAGCCAG+CGG | - | chr5_2:17386822-17386841 | None:intergenic | 40.0% | |
| AAATTTCATTTGCAGCGTGC+TGG | + | chr5_2:17387280-17387299 | Msa0760770:intron | 40.0% | |
| ! | AGAGCTAATGGATATGATGG+CGG | + | chr5_2:17387306-17387325 | Msa0760770:CDS | 40.0% |
| AGATGATTCTTCACCTGCAT+AGG | - | chr5_2:17387357-17387376 | None:intergenic | 40.0% | |
| CTATTGAGATCTGATTGGCA+TGG | + | chr5_2:17387550-17387569 | Msa0760770:intron | 40.0% | |
| ! | ACGATTATTGCGATTTTCCC+AGG | - | chr5_2:17387673-17387692 | None:intergenic | 40.0% |
| GGGAAAATCGCAATAATCGT+TGG | + | chr5_2:17387673-17387692 | Msa0760770:intron | 40.0% | |
| TTTGCACAACAAGTGAGAAG+AGG | - | chr5_2:17387817-17387836 | None:intergenic | 40.0% | |
| ACAACAACAAGAAGAAGAGG+CGG | - | chr5_2:17387892-17387911 | None:intergenic | 40.0% | |
| CACACAACAACAAGAAGAAG+AGG | - | chr5_2:17387895-17387914 | None:intergenic | 40.0% | |
| !! | TGTGGCTCCTAGGTTATTTT+TGG | + | chr5_2:17387919-17387938 | Msa0760770:intron | 40.0% |
| !!! | TTTTTGGTTGAAAGGGCTGT+AGG | + | chr5_2:17387935-17387954 | Msa0760770:intron | 40.0% |
| !! | TTTTGGTTGAAAGGGCTGTA+GGG | + | chr5_2:17387936-17387955 | Msa0760770:intron | 40.0% |
| AAGTGGGGAGAGAGTAATAT+TGG | + | chr5_2:17387964-17387983 | Msa0760770:intron | 40.0% | |
| AGTGGGGAGAGAGTAATATT+GGG | + | chr5_2:17387965-17387984 | Msa0760770:intron | 40.0% | |
| ! | GAGAGAGTAATATTGGGTTG+TGG | + | chr5_2:17387971-17387990 | Msa0760770:intron | 40.0% |
| CTTGATTTCTTCCAAGTACG+AGG | - | chr5_2:17388066-17388085 | None:intergenic | 40.0% | |
| ATCAAACTAGTCGATCAGCA+AGG | - | chr5_2:17388361-17388380 | None:intergenic | 40.0% | |
| TCAGGCTGAATGTAGAAAAC+TGG | + | chr5_2:17388421-17388440 | Msa0760770:intron | 40.0% | |
| CAGGCTGAATGTAGAAAACT+GGG | + | chr5_2:17388422-17388441 | Msa0760770:intron | 40.0% | |
| AAAGAACAGATCTTTCCCTG+AGG | - | chr5_2:17388499-17388518 | None:intergenic | 40.0% | |
| CAGAAGAGGTAATTTCTCGA+TGG | + | chr5_2:17388531-17388550 | Msa0760770:intron | 40.0% | |
| ! | ATATTGGCTACCTGCAGAAT+TGG | - | chr5_2:17388799-17388818 | None:intergenic | 40.0% |
| TCATGAGCATGCACTTCAAT+AGG | - | chr5_2:17388892-17388911 | None:intergenic | 40.0% | |
| CATGACCCATTACGATATGT+TGG | + | chr5_2:17388907-17388926 | Msa0760770:intron | 40.0% | |
| !! | ATGTTGGTGATATGTTAGGC+TGG | + | chr5_2:17388923-17388942 | Msa0760770:intron | 40.0% |
| ! | GTAGGGTACTTAAATACAGG+CGG | + | chr5_2:17389035-17389054 | Msa0760770:intron | 40.0% |
| GTACTTAAATACAGGCGGAA+AGG | + | chr5_2:17389040-17389059 | Msa0760770:intron | 40.0% | |
| ACTTAAATACAGGCGGAAAG+GGG | + | chr5_2:17389042-17389061 | Msa0760770:intron | 40.0% | |
| AACCACACAAGAGAGGAAAA+AGG | + | chr5_2:17389168-17389187 | Msa0760770:intron | 40.0% | |
| ! | TTCCTTTTTCCTCTCTTGTG+TGG | - | chr5_2:17389173-17389192 | None:intergenic | 40.0% |
| AGGAGAAATCCTTTGTGAAG+GGG | - | chr5_2:17389273-17389292 | None:intergenic | 40.0% | |
| CTGGTATCAACAATTGCATC+TGG | - | chr5_2:17389521-17389540 | None:intergenic | 40.0% | |
| !! | TTGGAGAGTTGATTTGCTGT+TGG | - | chr5_2:17389545-17389564 | None:intergenic | 40.0% |
| ! | CTCTCCAATAACTCTGAGAA+TGG | + | chr5_2:17389557-17389576 | Msa0760770:CDS | 40.0% |
| CTGCTCTTTGTAACACACTA+TGG | + | chr5_2:17389848-17389867 | Msa0760770:CDS | 40.0% | |
| ACTTTCCCGCAAACTGAAGA+AGG | + | chr5_2:17383856-17383875 | Msa0760770:CDS | 45.0% | |
| CGATAGTTGATCGGAGGTTA+CGG | - | chr5_2:17383970-17383989 | None:intergenic | 45.0% | |
| ! | GCTTTTCGATAGTTGATCGG+AGG | - | chr5_2:17383976-17383995 | None:intergenic | 45.0% |
| CACATCAAACCGAACCAGAT+CGG | - | chr5_2:17384106-17384125 | None:intergenic | 45.0% | |
| !! | TTGTTAGGCTTTGGATAGCG+TGG | + | chr5_2:17384132-17384151 | Msa0760770:intron | 45.0% |
| TTTGGATAGCGTGGAGAATG+AGG | + | chr5_2:17384141-17384160 | Msa0760770:CDS | 45.0% | |
| ! | GCTGTGATAGGTGCGATTTT+TGG | + | chr5_2:17384182-17384201 | Msa0760770:intron | 45.0% |
| ! | TGTCCAAGTTAAGAGGCATG+TGG | + | chr5_2:17384643-17384662 | Msa0760770:intron | 45.0% |
| CTACCACATGCCTCTTAACT+TGG | - | chr5_2:17384649-17384668 | None:intergenic | 45.0% | |
| CTAAGCACACACTACAGACT+GGG | - | chr5_2:17385076-17385095 | None:intergenic | 45.0% | |
| ACTAAGCACACACTACAGAC+TGG | - | chr5_2:17385077-17385096 | None:intergenic | 45.0% | |
| ATGTATTTAGTGCGAGGTGC+TGG | + | chr5_2:17385274-17385293 | Msa0760770:intron | 45.0% | |
| GTTAGCACTTAGTTGGGGTT+AGG | + | chr5_2:17385364-17385383 | Msa0760770:intron | 45.0% | |
| ! | TTCTTGTTTGAGCCTCTCTG+TGG | - | chr5_2:17385585-17385604 | None:intergenic | 45.0% |
| CAAAGCCATGGGTCAATAAC+AGG | - | chr5_2:17385705-17385724 | None:intergenic | 45.0% | |
| GTTGCTTAGGACACATCATC+AGG | + | chr5_2:17385867-17385886 | Msa0760770:CDS | 45.0% | |
| ! | TAAGTGGTAGTTCTGCTAGC+TGG | + | chr5_2:17385996-17386015 | Msa0760770:intron | 45.0% |
| AAGAAGGTTTGGCAGATGTC+TGG | + | chr5_2:17386126-17386145 | Msa0760770:intron | 45.0% | |
| AGAAGGTTTGGCAGATGTCT+GGG | + | chr5_2:17386127-17386146 | Msa0760770:intron | 45.0% | |
| !! | GTACCATCATTTCTGGCCTA+AGG | - | chr5_2:17386220-17386239 | None:intergenic | 45.0% |
| TAGGCCAGAAATGATGGTAC+TGG | + | chr5_2:17386220-17386239 | Msa0760770:intron | 45.0% | |
| CTTGCAACCAAGTGATCTCT+AGG | + | chr5_2:17386419-17386438 | Msa0760770:intron | 45.0% | |
| CTAGGATAACTGGCAGAAAG+AGG | + | chr5_2:17386437-17386456 | Msa0760770:intron | 45.0% | |
| GACTCTCCGTCCCTAAATAT+AGG | + | chr5_2:17386712-17386731 | Msa0760770:intron | 45.0% | |
| CAGGGTCCTATATTTAGGGA+CGG | - | chr5_2:17386721-17386740 | None:intergenic | 45.0% | |
| CCCTAAATATAGGACCCTGT+TGG | + | chr5_2:17386722-17386741 | Msa0760770:intron | 45.0% | |
| GCCAACAGGGTCCTATATTT+AGG | - | chr5_2:17386726-17386745 | None:intergenic | 45.0% | |
| CTCTGTCCTTAAACATAGGG+TGG | + | chr5_2:17386792-17386811 | Msa0760770:intron | 45.0% | |
| CTGTCCTTAAACATAGGGTG+GGG | + | chr5_2:17386794-17386813 | Msa0760770:intron | 45.0% | |
| TCATGCAATAGCAGGGTACA+GGG | - | chr5_2:17387014-17387033 | None:intergenic | 45.0% | |
| TGCATGAGATCTATAGCACC+AGG | + | chr5_2:17387027-17387046 | Msa0760770:intron | 45.0% | |
| CAAACCTTATCCCACTAGGT+GGG | - | chr5_2:17387083-17387102 | None:intergenic | 45.0% | |
| CAACCAAACCTTATCCCACT+AGG | - | chr5_2:17387087-17387106 | None:intergenic | 45.0% | |
| ! | GCAGCTGTGTCTATTTCTTC+TGG | + | chr5_2:17387124-17387143 | Msa0760770:intron | 45.0% |
| !! | ATGATGGCGGTGTATCAAGA+AGG | + | chr5_2:17387319-17387338 | Msa0760770:CDS | 45.0% |
| ACATGTGTGTGCGTATCACA+TGG | - | chr5_2:17387419-17387438 | None:intergenic | 45.0% | |
| ATTGAGTCGGTGAAATCACC+TGG | + | chr5_2:17387652-17387671 | Msa0760770:intron | 45.0% | |
| TTGAGTCGGTGAAATCACCT+GGG | + | chr5_2:17387653-17387672 | Msa0760770:intron | 45.0% | |
| AAGGTGGAAAAAGAGACTGC+GGG | - | chr5_2:17387772-17387791 | None:intergenic | 45.0% | |
| CAAGGTGGAAAAAGAGACTG+CGG | - | chr5_2:17387773-17387792 | None:intergenic | 45.0% | |
| ACAAGTGAGAAGAGGAACTG+AGG | - | chr5_2:17387809-17387828 | None:intergenic | 45.0% | |
| GGGAGAGAGAAAGTTGCATA+GGG | - | chr5_2:17387843-17387862 | None:intergenic | 45.0% | |
| AGGGAGAGAGAAAGTTGCAT+AGG | - | chr5_2:17387844-17387863 | None:intergenic | 45.0% | |
| GATAGGCAATACACAGGAGA+GGG | - | chr5_2:17387863-17387882 | None:intergenic | 45.0% | |
| AGAAGAGGCGGAATTTGGAT+AGG | - | chr5_2:17387880-17387899 | None:intergenic | 45.0% | |
| CAAGAAGAAGAGGCGGAATT+TGG | - | chr5_2:17387885-17387904 | None:intergenic | 45.0% | |
| !! | CTTGTTGTTGTGTGAGAGTG+TGG | + | chr5_2:17387901-17387920 | Msa0760770:intron | 45.0% |
| ! | TCTTTAGCCATTGGAGGCAT+TGG | + | chr5_2:17388023-17388042 | Msa0760770:intron | 45.0% |
| !! | CTTTAGCCATTGGAGGCATT+GGG | + | chr5_2:17388024-17388043 | Msa0760770:intron | 45.0% |
| CTTCCAAGTACGAGGAGTTT+AGG | - | chr5_2:17388058-17388077 | None:intergenic | 45.0% | |
| ! | CTTTACATCTAGGTGGGTTC+AGG | + | chr5_2:17388403-17388422 | Msa0760770:intron | 45.0% |
| GACACTGACAATCCAGAAGT+TGG | + | chr5_2:17388446-17388465 | Msa0760770:CDS | 45.0% | |
| ATGGATGGTGCACCATCTAA+TGG | + | chr5_2:17388648-17388667 | Msa0760770:intron | 45.0% | |
| ATAAGTGCTCTTACACGTGG+AGG | + | chr5_2:17388847-17388866 | Msa0760770:CDS | 45.0% | |
| !! | TGAATGCTGCTTTGCTACCA+TGG | + | chr5_2:17388998-17389017 | Msa0760770:intron | 45.0% |
| TAAGAGAGAGCTCTTGTCCT+TGG | + | chr5_2:17389242-17389261 | Msa0760770:intron | 45.0% | |
| AAGAGAGAGCTCTTGTCCTT+GGG | + | chr5_2:17389243-17389262 | Msa0760770:intron | 45.0% | |
| TTTGTGAAGGGGAAAACCCA+AGG | - | chr5_2:17389262-17389281 | None:intergenic | 45.0% | |
| ! | TTGGGTTTTCCCCTTCACAA+AGG | + | chr5_2:17389261-17389280 | Msa0760770:intron | 45.0% |
| ATAGGGGGTAGAAAGATGCT+GGG | - | chr5_2:17389328-17389347 | None:intergenic | 45.0% | |
| AATAGGGGGTAGAAAGATGC+TGG | - | chr5_2:17389329-17389348 | None:intergenic | 45.0% | |
| !! | TTATTTCTGCTTGCAGGCCT+TGG | + | chr5_2:17389460-17389479 | Msa0760770:intron | 45.0% |
| AAGTTCTCGTTCAGATGCCA+AGG | - | chr5_2:17389480-17389499 | None:intergenic | 45.0% | |
| !! | GAGTTGATTTGCTGTTGGTC+TGG | - | chr5_2:17389540-17389559 | None:intergenic | 45.0% |
| GAAGACGAGAATGGGAACGA+CGG | + | chr5_2:17383814-17383833 | Msa0760770:exon | 50.0% | |
| TTCAGTTTGCGGGAAAGTCC+CGG | - | chr5_2:17383854-17383873 | None:intergenic | 50.0% | |
| CACTTGCGGAATGCTGTGAT+AGG | + | chr5_2:17384170-17384189 | Msa0760770:CDS | 50.0% | |
| TAGCATGTTCGAGCTGAGTG+TGG | + | chr5_2:17385228-17385247 | Msa0760770:intron | 50.0% | |
| TTCGAGCTGAGTGTGGTTTG+TGG | + | chr5_2:17385235-17385254 | Msa0760770:intron | 50.0% | |
| TTATCAGCTCTCCCCTGAAG+AGG | + | chr5_2:17385655-17385674 | Msa0760770:CDS | 50.0% | |
| TCCACCTGAACAGCGACTTT+AGG | + | chr5_2:17386255-17386274 | Msa0760770:intron | 50.0% | |
| TCCTAAAGTCGCTGTTCAGG+TGG | - | chr5_2:17386259-17386278 | None:intergenic | 50.0% | |
| CAATAGCAGGGTACAGGGAA+GGG | - | chr5_2:17387009-17387028 | None:intergenic | 50.0% | |
| CTCATGCAATAGCAGGGTAC+AGG | - | chr5_2:17387015-17387034 | None:intergenic | 50.0% | |
| AGGTAGTCAATCCCACCTAG+TGG | + | chr5_2:17387069-17387088 | Msa0760770:intron | 50.0% | |
| GGTAGTCAATCCCACCTAGT+GGG | + | chr5_2:17387070-17387089 | Msa0760770:intron | 50.0% | |
| CAATCCCACCTAGTGGGATA+AGG | + | chr5_2:17387076-17387095 | Msa0760770:intron | 50.0% | |
| CCAAACCTTATCCCACTAGG+TGG | - | chr5_2:17387084-17387103 | None:intergenic | 50.0% | |
| CCACCTAGTGGGATAAGGTT+TGG | + | chr5_2:17387081-17387100 | Msa0760770:intron | 50.0% | |
| !! | GCGTGCTGGTTTAGAGCTAA+TGG | + | chr5_2:17387294-17387313 | Msa0760770:intron | 50.0% |
| GGAAAAAGAGACTGCGGGTA+GGG | - | chr5_2:17387767-17387786 | None:intergenic | 50.0% | |
| TGGAAAAAGAGACTGCGGGT+AGG | - | chr5_2:17387768-17387787 | None:intergenic | 50.0% | |
| GGATAGGCAATACACAGGAG+AGG | - | chr5_2:17387864-17387883 | None:intergenic | 50.0% | |
| ATACAGCCCAATGCCTCCAA+TGG | - | chr5_2:17388033-17388052 | None:intergenic | 50.0% | |
| !! | ATTGGAGGCATTGGGCTGTA+TGG | + | chr5_2:17388032-17388051 | Msa0760770:intron | 50.0% |
| TGGCCTAAACTCCTCGTACT+TGG | + | chr5_2:17388052-17388071 | Msa0760770:intron | 50.0% | |
| TTCAGAAGCTCGCCAACTTC+TGG | - | chr5_2:17388461-17388480 | None:intergenic | 50.0% | |
| GCATGCACTTCAATAGGTCG+AGG | - | chr5_2:17388886-17388905 | None:intergenic | 50.0% | |
| ! | TATGTTAGGCTGGCTGCATC+AGG | + | chr5_2:17388933-17388952 | Msa0760770:intron | 50.0% |
| ! | GGTAGTTCTGCTAGCTGGAC+TGG | + | chr5_2:17386001-17386020 | Msa0760770:intron | 55.0% |
| GGAGCCCCACCCTATGTTTA+AGG | - | chr5_2:17386801-17386820 | None:intergenic | 55.0% | |
| GCAATAGCAGGGTACAGGGA+AGG | - | chr5_2:17387010-17387029 | None:intergenic | 55.0% | |
| GAGCTTATGAGCGCCTATGC+AGG | + | chr5_2:17387341-17387360 | Msa0760770:CDS | 55.0% | |
| TGAGGCAGAACTTGCGCACA+AGG | - | chr5_2:17387791-17387810 | None:intergenic | 55.0% | |
| ! | TGTGTGAGAGTGTGGCTCCT+AGG | + | chr5_2:17387909-17387928 | Msa0760770:intron | 55.0% |
| GGTTGAAAGGGCTGTAGGGT+TGG | + | chr5_2:17387940-17387959 | Msa0760770:intron | 55.0% | |
| AGGGCTGTAGGGTTGGAAAG+TGG | + | chr5_2:17387947-17387966 | Msa0760770:intron | 55.0% | |
| GGGCTGTAGGGTTGGAAAGT+GGG | + | chr5_2:17387948-17387967 | Msa0760770:intron | 55.0% | |
| GGCTGTAGGGTTGGAAAGTG+GGG | + | chr5_2:17387949-17387968 | Msa0760770:intron | 55.0% | |
| AAACAGCTGTGCGCTACCTC+AGG | + | chr5_2:17388480-17388499 | Msa0760770:CDS | 55.0% | |
| AACAGCTGTGCGCTACCTCA+GGG | + | chr5_2:17388481-17388500 | Msa0760770:CDS | 55.0% | |
| ! | ATAGGTCGAGGCATTCCACC+AGG | - | chr5_2:17388874-17388893 | None:intergenic | 55.0% |
| GACGAGAATGGGAACGACGG+TGG | + | chr5_2:17383817-17383836 | Msa0760770:exon | 60.0% | |
| GAGAATGGGAACGACGGTGG+CGG | + | chr5_2:17383820-17383839 | Msa0760770:exon | 60.0% | |
| AGAATGGGAACGACGGTGGC+GGG | + | chr5_2:17383821-17383840 | Msa0760770:exon | 60.0% | |
| TGCTTCGCATGCCGCACAAC+TGG | + | chr5_2:17384027-17384046 | Msa0760770:CDS | 60.0% | |
| ! | GGGCTCCGCTGGCTGAATTA+CGG | + | chr5_2:17386814-17386833 | Msa0760770:intron | 60.0% |
| AGCAGGGTACAGGGAAGGGT+CGG | - | chr5_2:17387005-17387024 | None:intergenic | 60.0% | |
| GGCAGAACTTGCGCACAAGG+TGG | - | chr5_2:17387788-17387807 | None:intergenic | 60.0% | |
| GCTCTTACACGTGGAGGACC+TGG | + | chr5_2:17388853-17388872 | Msa0760770:CDS | 60.0% | |
| CTTACACGTGGAGGACCTGG+TGG | + | chr5_2:17388856-17388875 | Msa0760770:CDS | 60.0% | |
| CGGAGGTTACGGCGAGCTTG+AGG | - | chr5_2:17383959-17383978 | None:intergenic | 65.0% | |
| AACATAGGGTGGGGCTCCGC+TGG | + | chr5_2:17386803-17386822 | Msa0760770:intron | 65.0% | |
| !! | GACGGTGGCGGGTCTAGCGC+CGG | + | chr5_2:17383832-17383851 | Msa0760770:CDS | 75.0% |
| !! | ACGGTGGCGGGTCTAGCGCC+GGG | + | chr5_2:17383833-17383852 | Msa0760770:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 17383741 | 17389926 | 17383741 | ID=Msa0760770;Name=Msa0760770 |
| chr5_2 | mRNA | 17383741 | 17389926 | 17383741 | ID=Msa0760770-mRNA-1;Parent=Msa0760770;Name=Msa0760770-mRNA-1;_AED=0.10;_eAED=0.10;_QI=83|0.62|0.66|1|0.75|0.66|9|49|374 |
| chr5_2 | exon | 17383741 | 17384048 | 17383741 | ID=Msa0760770-mRNA-1:exon:7728;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17384139 | 17384191 | 17384139 | ID=Msa0760770-mRNA-1:exon:7729;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17385529 | 17385676 | 17385529 | ID=Msa0760770-mRNA-1:exon:7730;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17385781 | 17385888 | 17385781 | ID=Msa0760770-mRNA-1:exon:7731;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17387295 | 17387362 | 17387295 | ID=Msa0760770-mRNA-1:exon:7732;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17388436 | 17388538 | 17388436 | ID=Msa0760770-mRNA-1:exon:7733;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17388808 | 17388924 | 17388808 | ID=Msa0760770-mRNA-1:exon:7734;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17389476 | 17389723 | 17389476 | ID=Msa0760770-mRNA-1:exon:7735;Parent=Msa0760770-mRNA-1 |
| chr5_2 | exon | 17389823 | 17389926 | 17389823 | ID=Msa0760770-mRNA-1:exon:7736;Parent=Msa0760770-mRNA-1 |
| chr5_2 | five_prime_UTR | 17383741 | 17383823 | 17383741 | ID=Msa0760770-mRNA-1:five_prime_utr;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17383824 | 17384048 | 17383824 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17384139 | 17384191 | 17384139 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17385529 | 17385676 | 17385529 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17385781 | 17385888 | 17385781 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17387295 | 17387362 | 17387295 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17388436 | 17388538 | 17388436 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17388808 | 17388924 | 17388808 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17389476 | 17389723 | 17389476 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | CDS | 17389823 | 17389877 | 17389823 | ID=Msa0760770-mRNA-1:cds;Parent=Msa0760770-mRNA-1 |
| chr5_2 | three_prime_UTR | 17389878 | 17389926 | 17389878 | ID=Msa0760770-mRNA-1:three_prime_utr;Parent=Msa0760770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
