Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312970 | XP_003593582.1 | 94.637 | 317 | 16 | 1 | 1 | 316 | 1 | 317 | 0.0 | 620 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0312890 | Msa0312970 | 0.992322 | 1.341097e-192 | -8.615850e-47 |
| Msa0312950 | Msa0312970 | 0.999340 | 2.584349e-304 | -8.615850e-47 |
| Msa0312970 | Msa0716150 | 0.809023 | 2.322594e-50 | -8.615850e-47 |
| Msa0312970 | Msa1158620 | 0.814118 | 1.813129e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312970 | MtrunA17_Chr2g0282301 | 94.637 | 317 | 16 | 1 | 1 | 316 | 1 | 317 | 0.0 | 620 |
| Msa0312970 | MtrunA17_Chr2g0282311 | 72.956 | 318 | 82 | 4 | 1 | 316 | 4 | 319 | 2.90e-166 | 465 |
| Msa0312970 | MtrunA17_Chr4g0047231 | 56.442 | 326 | 130 | 6 | 1 | 316 | 1 | 324 | 8.68e-127 | 365 |
| Msa0312970 | MtrunA17_Chr4g0047221 | 56.615 | 325 | 129 | 8 | 1 | 316 | 55 | 376 | 8.56e-123 | 357 |
| Msa0312970 | MtrunA17_Chr4g0040171 | 55.602 | 241 | 96 | 6 | 78 | 316 | 59 | 290 | 4.20e-88 | 265 |
| Msa0312970 | MtrunA17_Chr5g0396281 | 35.398 | 226 | 140 | 3 | 60 | 283 | 19 | 240 | 6.23e-46 | 155 |
| Msa0312970 | MtrunA17_Chr4g0075611 | 36.628 | 172 | 88 | 2 | 103 | 274 | 112 | 262 | 5.78e-34 | 126 |
| Msa0312970 | MtrunA17_Chr4g0075591 | 41.985 | 131 | 70 | 1 | 144 | 274 | 120 | 244 | 1.37e-33 | 124 |
| Msa0312970 | MtrunA17_Chr7g0251511 | 34.459 | 148 | 96 | 1 | 128 | 275 | 117 | 263 | 6.98e-33 | 124 |
| Msa0312970 | MtrunA17_Chr8g0339051 | 37.500 | 144 | 86 | 2 | 144 | 283 | 133 | 276 | 1.06e-32 | 122 |
| Msa0312970 | MtrunA17_Chr1g0166241 | 40.769 | 130 | 71 | 2 | 139 | 268 | 150 | 273 | 1.60e-32 | 123 |
| Msa0312970 | MtrunA17_Chr1g0188091 | 39.716 | 141 | 79 | 2 | 139 | 279 | 172 | 306 | 1.04e-30 | 119 |
| Msa0312970 | MtrunA17_Chr2g0289701 | 36.842 | 133 | 78 | 2 | 144 | 276 | 136 | 262 | 3.21e-29 | 114 |
| Msa0312970 | MtrunA17_Chr8g0384101 | 37.302 | 126 | 78 | 1 | 142 | 266 | 82 | 207 | 7.95e-29 | 111 |
| Msa0312970 | MtrunA17_Chr1g0184881 | 33.333 | 174 | 107 | 3 | 146 | 316 | 172 | 339 | 3.65e-28 | 111 |
| Msa0312970 | MtrunA17_Chr7g0260551 | 39.167 | 120 | 67 | 1 | 154 | 273 | 172 | 285 | 6.49e-28 | 111 |
| Msa0312970 | MtrunA17_Chr7g0234691 | 36.434 | 129 | 80 | 2 | 144 | 271 | 173 | 300 | 8.24e-26 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0312970 | AT4G32480.1 | 53.165 | 237 | 105 | 4 | 67 | 302 | 43 | 274 | 1.62e-85 | 259 |
| Msa0312970 | AT2G20670.1 | 50.000 | 226 | 101 | 4 | 83 | 302 | 61 | 280 | 6.02e-77 | 237 |
| Msa0312970 | AT3G07350.1 | 37.086 | 151 | 95 | 0 | 132 | 282 | 125 | 275 | 1.30e-39 | 141 |
| Msa0312970 | AT4G14620.1 | 36.872 | 179 | 105 | 3 | 139 | 315 | 140 | 312 | 1.75e-35 | 131 |
| Msa0312970 | AT2G38820.2 | 38.298 | 141 | 75 | 3 | 137 | 271 | 148 | 282 | 1.78e-31 | 120 |
| Msa0312970 | AT3G25240.1 | 35.971 | 139 | 88 | 1 | 139 | 276 | 112 | 250 | 6.27e-31 | 118 |
| Msa0312970 | AT3G22970.2 | 39.259 | 135 | 76 | 1 | 139 | 273 | 54 | 182 | 9.15e-31 | 117 |
| Msa0312970 | AT3G22970.1 | 39.850 | 133 | 74 | 1 | 139 | 271 | 165 | 291 | 1.74e-29 | 115 |
| Msa0312970 | AT2G39650.2 | 30.657 | 137 | 94 | 1 | 137 | 272 | 42 | 178 | 9.15e-28 | 108 |
| Msa0312970 | AT2G39650.1 | 30.657 | 137 | 94 | 1 | 137 | 272 | 104 | 240 | 1.73e-27 | 108 |
| Msa0312970 | AT3G54550.1 | 35.036 | 137 | 79 | 2 | 143 | 275 | 145 | 275 | 4.24e-26 | 105 |
| Msa0312970 | AT1G62420.1 | 33.333 | 153 | 89 | 3 | 131 | 280 | 101 | 243 | 4.10e-25 | 102 |
| Msa0312970 | AT1G12030.1 | 33.333 | 132 | 81 | 2 | 144 | 274 | 112 | 237 | 4.04e-23 | 97.4 |
| Msa0312970 | AT1G77145.1 | 31.757 | 148 | 89 | 2 | 139 | 274 | 72 | 219 | 2.84e-21 | 91.7 |
| Msa0312970 | AT1G77160.2 | 32.117 | 137 | 81 | 2 | 142 | 266 | 25 | 161 | 3.78e-21 | 90.1 |
| Msa0312970 | AT1G77160.1 | 32.143 | 140 | 83 | 2 | 139 | 266 | 77 | 216 | 4.86e-21 | 90.9 |
| Msa0312970 | AT1G77145.2 | 35.514 | 107 | 65 | 1 | 172 | 274 | 56 | 162 | 3.11e-16 | 76.3 |
Find 75 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTTGACTATTGATTTAT+TGG | 0.144388 | 2_4:+8220344 | Msa0312970:CDS |
| AACATGGATGCCTTTGATTT+TGG | 0.176314 | 2_4:-8220327 | None:intergenic |
| ATCCTTACTTCCCCTTTCTT+TGG | 0.194440 | 2_4:-8220015 | None:intergenic |
| TATTTCTTGAATAGCTTCTT+TGG | 0.203225 | 2_4:-8219101 | None:intergenic |
| CAGGAACCTAGTAGACTTTC+TGG | 0.231900 | 2_4:-8218459 | None:intergenic |
| ATTTATCTCTATACAAATAT+TGG | 0.278613 | 2_4:-8220562 | None:intergenic |
| TCATTCACTTGAAATGGATT+TGG | 0.300841 | 2_4:+8218616 | Msa0312970:CDS |
| TTGAGAAGAACCGAAGCTTT+TGG | 0.320088 | 2_4:+8218675 | Msa0312970:CDS |
| TGAACTTGTTCTATATATAT+TGG | 0.329591 | 2_4:-8219053 | None:intergenic |
| TCTACGAGGCTTCAGAAATC+TGG | 0.333574 | 2_4:+8219208 | Msa0312970:CDS |
| GTGCTATCTGCAAAACAAAA+TGG | 0.339768 | 2_4:+8219239 | Msa0312970:CDS |
| TCTATGTCATTCACTTGAAA+TGG | 0.356046 | 2_4:+8218610 | Msa0312970:CDS |
| ATTGCATTGCACAGCTGTTA+AGG | 0.385921 | 2_4:+8220380 | Msa0312970:CDS |
| GTTGAAGTGTTCCTTTCAAA+TGG | 0.386132 | 2_4:-8220261 | None:intergenic |
| ATAGGTACATGCAAGCTAAA+TGG | 0.395692 | 2_4:+8220232 | Msa0312970:CDS |
| AAGGTTGTGTGATTGTAAAA+AGG | 0.406027 | 2_4:+8220399 | Msa0312970:exon |
| AGCTGCCCGAGGTGTTTGTT+GGG | 0.406249 | 2_4:+8220112 | Msa0312970:CDS |
| TGTTGGGAAAGTAGAGAGAT+TGG | 0.411917 | 2_4:+8220128 | Msa0312970:CDS |
| ATCCAAAGAAAGGGGAAGTA+AGG | 0.437384 | 2_4:+8220013 | Msa0312970:CDS |
| GACAATACAAATCCAAAGAA+AGG | 0.438456 | 2_4:+8220003 | Msa0312970:CDS |
| CTTTGAGAAAACAAGAATCA+TGG | 0.448459 | 2_4:+8218421 | Msa0312970:exon |
| CCTTGGCCAGAAAGTCTACT+AGG | 0.449081 | 2_4:+8218453 | Msa0312970:CDS |
| GTTCCTGACGATTAATCGTC+AGG | 0.459884 | 2_4:+8218475 | Msa0312970:CDS |
| AAAGCTTCGGTTCTTCTCAA+TGG | 0.462467 | 2_4:-8218672 | None:intergenic |
| GTTGGCTTTCCCAAAAGCTT+CGG | 0.463303 | 2_4:-8218685 | None:intergenic |
| ACAATACAAATCCAAAGAAA+GGG | 0.465593 | 2_4:+8220004 | Msa0312970:CDS |
| GCGATTTACATACAAGTATG+TGG | 0.471891 | 2_4:-8220540 | None:intergenic |
| AAGCTGCCCGAGGTGTTTGT+TGG | 0.472850 | 2_4:+8220111 | Msa0312970:CDS |
| GGATGATGATGAAGAGGAAA+GGG | 0.474372 | 2_4:+8218637 | Msa0312970:CDS |
| GTTGGGAAAGTAGAGAGATT+GGG | 0.477670 | 2_4:+8220129 | Msa0312970:CDS |
| AATCATGGGTGTTACCTCCT+TGG | 0.479101 | 2_4:+8218436 | Msa0312970:exon |
| TTCTTGAATAGCTTCTTTGG+TGG | 0.492308 | 2_4:-8219098 | None:intergenic |
| AAGCCAACATCTTGGTGTGC+AGG | 0.494557 | 2_4:+8218700 | Msa0312970:CDS |
| TATCCTGACGATTAATCGTC+AGG | 0.500747 | 2_4:-8218478 | None:intergenic |
| TTCAACAACTCCTCTTCCAA+TGG | 0.503995 | 2_4:+8220278 | Msa0312970:CDS |
| TACATGCAAGCTAAATGGTT+GGG | 0.506802 | 2_4:+8220237 | Msa0312970:CDS |
| CAATAAATCAATAGTCAACA+TGG | 0.512237 | 2_4:-8220343 | None:intergenic |
| TTGCCATCTCAAACTCAGCT+TGG | 0.517950 | 2_4:-8220056 | None:intergenic |
| AATGGTTGGGTCCATTTGAA+AGG | 0.521633 | 2_4:+8220250 | Msa0312970:CDS |
| AAGCTGAGTTTGAGATGGCA+AGG | 0.523389 | 2_4:+8220058 | Msa0312970:CDS |
| TGGATGATGATGAAGAGGAA+AGG | 0.523495 | 2_4:+8218636 | Msa0312970:CDS |
| CGATTTACATACAAGTATGT+GGG | 0.525714 | 2_4:-8220539 | None:intergenic |
| TCAACAACTCCTCTTCCAAT+GGG | 0.527252 | 2_4:+8220279 | Msa0312970:CDS |
| TTTGAGAAAACAAGAATCAT+GGG | 0.534040 | 2_4:+8218422 | Msa0312970:exon |
| ACTTCATCAGATATTCCATC+AGG | 0.535880 | 2_4:+8219265 | Msa0312970:CDS |
| ACTGACGAAGTGATCATGTC+GGG | 0.551370 | 2_4:+8218566 | Msa0312970:CDS |
| TCAGAAATTCCCATTGGAAG+AGG | 0.553074 | 2_4:-8220288 | None:intergenic |
| TGGCTGCAACAGAAAGATGA+TGG | 0.553863 | 2_4:+8219144 | Msa0312970:CDS |
| ATGTACCTATGCTTCCTCCA+TGG | 0.558080 | 2_4:-8220219 | None:intergenic |
| TTTCCAAGCTGAGTTTGAGA+TGG | 0.565289 | 2_4:+8220053 | Msa0312970:CDS |
| GTTCATTAGAGACAAAGATA+AGG | 0.565658 | 2_4:+8219071 | Msa0312970:CDS |
| AATAACAAAGCCAAAATCAA+AGG | 0.568849 | 2_4:+8220317 | Msa0312970:CDS |
| ACTTTCCCAACAAACACCTC+GGG | 0.573313 | 2_4:-8220117 | None:intergenic |
| GTACATGCAAGCTAAATGGT+TGG | 0.573929 | 2_4:+8220236 | Msa0312970:CDS |
| ATCCTCTCAGAAATTCCCAT+TGG | 0.574010 | 2_4:-8220294 | None:intergenic |
| TACTTTCCCAACAAACACCT+CGG | 0.575693 | 2_4:-8220118 | None:intergenic |
| ACAGCTGTGCAATGCAATGT+TGG | 0.576393 | 2_4:-8220375 | None:intergenic |
| TGGGGCCATGGAGGAAGCAT+AGG | 0.577510 | 2_4:+8220214 | Msa0312970:CDS |
| AGCTGAGTTTGAGATGGCAA+GGG | 0.587593 | 2_4:+8220059 | Msa0312970:CDS |
| CCTAGTAGACTTTCTGGCCA+AGG | 0.588067 | 2_4:-8218453 | None:intergenic |
| CAGGATAGTCTCGAGTCTGA+AGG | 0.595130 | 2_4:+8218494 | Msa0312970:CDS |
| TCACCTGCACACCAAGATGT+TGG | 0.598265 | 2_4:-8218703 | None:intergenic |
| CAATCTTCAGACACGAGTGT+TGG | 0.608841 | 2_4:+8218518 | Msa0312970:CDS |
| GGATTTGGATGATGATGAAG+AGG | 0.619315 | 2_4:+8218631 | Msa0312970:CDS |
| TACTGACGAAGTGATCATGT+CGG | 0.631088 | 2_4:+8218565 | Msa0312970:CDS |
| GGCTGCAACAGAAAGATGAT+GGG | 0.637175 | 2_4:+8219145 | Msa0312970:CDS |
| CAATACAAATCCAAAGAAAG+GGG | 0.639538 | 2_4:+8220005 | Msa0312970:CDS |
| AAATGCACATGGGGCCATGG+AGG | 0.645712 | 2_4:+8220205 | Msa0312970:CDS |
| GCTGAGTTTGAGATGGCAAG+GGG | 0.658083 | 2_4:+8220060 | Msa0312970:CDS |
| TTCCAATGGGAATTTCTGAG+AGG | 0.662878 | 2_4:+8220292 | Msa0312970:CDS |
| AGTAGACTTTCTGGCCAAGG+AGG | 0.681329 | 2_4:-8218450 | None:intergenic |
| ACTCGTGCAGAAGCTGCCCG+AGG | 0.684249 | 2_4:+8220101 | Msa0312970:CDS |
| GATTTACATACAAGTATGTG+GGG | 0.685935 | 2_4:-8220538 | None:intergenic |
| AAAAGCTGTGGAGCAGTGTG+TGG | 0.710871 | 2_4:+8219124 | Msa0312970:CDS |
| TGATGAGGGAAGTTTCTACG+AGG | 0.752965 | 2_4:+8219194 | Msa0312970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAATACATATTAATTT+TGG | - | chr2_4:8218828-8218847 | None:intergenic | 10.0% |
| !! | TTAAATCATATTTATTAAGA+AGG | - | chr2_4:8218955-8218974 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTTTTGGT+GGG | - | chr2_4:8219469-8219488 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTATTTTTTGG+TGG | - | chr2_4:8219470-8219489 | None:intergenic | 10.0% |
| !!! | CACTTTTTTATTTTATTTTT+TGG | - | chr2_4:8219473-8219492 | None:intergenic | 10.0% |
| !! | CAAAAAATAAAATAAAAAAG+TGG | + | chr2_4:8219471-8219490 | Msa0312970:intron | 10.0% |
| !!! | AATATAATTGATGATATTTT+GGG | - | chr2_4:8219598-8219617 | None:intergenic | 10.0% |
| !!! | AAATATAATTGATGATATTT+TGG | - | chr2_4:8219599-8219618 | None:intergenic | 10.0% |
| !!! | AATTTAATTAGTTTTTTTAC+TGG | + | chr2_4:8220428-8220447 | Msa0312970:three_prime_UTR | 10.0% |
| !!! | AATCAAATACATATTAATTT+TGG | - | chr2_4:8218828-8218847 | None:intergenic | 10.0% |
| !! | TTAAATCATATTTATTAAGA+AGG | - | chr2_4:8218955-8218974 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTTTTGGT+GGG | - | chr2_4:8219469-8219488 | None:intergenic | 10.0% |
| !!! | TTTTTTATTTTATTTTTTGG+TGG | - | chr2_4:8219470-8219489 | None:intergenic | 10.0% |
| !!! | CACTTTTTTATTTTATTTTT+TGG | - | chr2_4:8219473-8219492 | None:intergenic | 10.0% |
| !! | CAAAAAATAAAATAAAAAAG+TGG | + | chr2_4:8219471-8219490 | Msa0312970:intron | 10.0% |
| !!! | AATATAATTGATGATATTTT+GGG | - | chr2_4:8219598-8219617 | None:intergenic | 10.0% |
| !!! | AAATATAATTGATGATATTT+TGG | - | chr2_4:8219599-8219618 | None:intergenic | 10.0% |
| !!! | AATTTAATTAGTTTTTTTAC+TGG | + | chr2_4:8220428-8220447 | Msa0312970:three_prime_UTR | 10.0% |
| !!! | ATATGTATTTGATTTTTTGT+TGG | + | chr2_4:8218834-8218853 | Msa0312970:intron | 15.0% |
| !! | GGATTAAAAAATTAAAAAGT+AGG | + | chr2_4:8219518-8219537 | Msa0312970:intron | 15.0% |
| !! | ATTTATCTCTATACAAATAT+TGG | - | chr2_4:8220565-8220584 | None:intergenic | 15.0% |
| !!! | ATATGTATTTGATTTTTTGT+TGG | + | chr2_4:8218834-8218853 | Msa0312970:intron | 15.0% |
| !! | GGATTAAAAAATTAAAAAGT+AGG | + | chr2_4:8219518-8219537 | Msa0312970:intron | 15.0% |
| !! | ATTTATCTCTATACAAATAT+TGG | - | chr2_4:8220565-8220584 | None:intergenic | 15.0% |
| !!! | TTTTGTTTTGATCAATCAAT+GGG | + | chr2_4:8219012-8219031 | Msa0312970:intron | 20.0% |
| !!! | TGAACTTGTTCTATATATAT+TGG | - | chr2_4:8219056-8219075 | None:intergenic | 20.0% |
| !!! | TTTTATGAAAAGCAATATTG+TGG | + | chr2_4:8219384-8219403 | Msa0312970:intron | 20.0% |
| !! | GCACATTAACTAATATATAA+AGG | - | chr2_4:8219885-8219904 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTGATCAATCAAT+GGG | + | chr2_4:8219012-8219031 | Msa0312970:intron | 20.0% |
| !!! | TGAACTTGTTCTATATATAT+TGG | - | chr2_4:8219056-8219075 | None:intergenic | 20.0% |
| !!! | TTTTATGAAAAGCAATATTG+TGG | + | chr2_4:8219384-8219403 | Msa0312970:intron | 20.0% |
| !! | GCACATTAACTAATATATAA+AGG | - | chr2_4:8219885-8219904 | None:intergenic | 20.0% |
| ! | TTTGAGAAAACAAGAATCAT+GGG | + | chr2_4:8218422-8218441 | Msa0312970:exon | 25.0% |
| !! | TTAGTGTGATTTTATGTTGA+GGG | + | chr2_4:8218759-8218778 | Msa0312970:intron | 25.0% |
| ! | CTATAATTATCAGCTAAGTA+CGG | + | chr2_4:8218893-8218912 | Msa0312970:intron | 25.0% |
| !!! | GTTCTAAAAGCATTAGATTT+TGG | + | chr2_4:8218985-8219004 | Msa0312970:intron | 25.0% |
| !!! | CTTTTGTTTTGATCAATCAA+TGG | + | chr2_4:8219011-8219030 | Msa0312970:intron | 25.0% |
| !!! | CAATCAATGGGATTTAATTT+TGG | + | chr2_4:8219024-8219043 | Msa0312970:intron | 25.0% |
| ! | TATTTCTTGAATAGCTTCTT+TGG | - | chr2_4:8219104-8219123 | None:intergenic | 25.0% |
| ! | ATTCAAGAAATAAAAAGCTG+TGG | + | chr2_4:8219112-8219131 | Msa0312970:CDS | 25.0% |
| ! | GGAAAGAAAGAAAATTGAAA+AGG | + | chr2_4:8219560-8219579 | Msa0312970:intron | 25.0% |
| ! | TCATGAATTTAAGTCTACTT+TGG | - | chr2_4:8219811-8219830 | None:intergenic | 25.0% |
| !! | CACACTATTCTTTTATAGAT+TGG | - | chr2_4:8219841-8219860 | None:intergenic | 25.0% |
| ! | GTGATATATGCTATTAGATT+AGG | - | chr2_4:8219943-8219962 | None:intergenic | 25.0% |
| ! | TATATCACAATTAACTATGC+AGG | + | chr2_4:8219955-8219974 | Msa0312970:intron | 25.0% |
| ! | ATATCACAATTAACTATGCA+GGG | + | chr2_4:8219956-8219975 | Msa0312970:intron | 25.0% |
| ! | ACAATACAAATCCAAAGAAA+GGG | + | chr2_4:8220004-8220023 | Msa0312970:CDS | 25.0% |
| !!! | CACTGCATAATATTTTGATT+AGG | - | chr2_4:8220158-8220177 | None:intergenic | 25.0% |
| !!! | TTTATCCTTCATGCATTTTT+TGG | - | chr2_4:8220184-8220203 | None:intergenic | 25.0% |
| ! | AAGGATAAAAAAATGCACAT+GGG | + | chr2_4:8220195-8220214 | Msa0312970:CDS | 25.0% |
| ! | AATAACAAAGCCAAAATCAA+AGG | + | chr2_4:8220317-8220336 | Msa0312970:CDS | 25.0% |
| ! | CAATAAATCAATAGTCAACA+TGG | - | chr2_4:8220346-8220365 | None:intergenic | 25.0% |
| !!! | CATGTTGACTATTGATTTAT+TGG | + | chr2_4:8220344-8220363 | Msa0312970:CDS | 25.0% |
| !!! | GTCATTTTGCATTTTTGTTA+TGG | + | chr2_4:8220450-8220469 | Msa0312970:three_prime_UTR | 25.0% |
| !! | TAATTTTCACCAAAGAAAAG+AGG | - | chr2_4:8220491-8220510 | None:intergenic | 25.0% |
| !! | CTTTTCTTTGGTGAAAATTA+AGG | + | chr2_4:8220491-8220510 | Msa0312970:three_prime_UTR | 25.0% |
| ! | TTTGAGAAAACAAGAATCAT+GGG | + | chr2_4:8218422-8218441 | Msa0312970:exon | 25.0% |
| !! | TTAGTGTGATTTTATGTTGA+GGG | + | chr2_4:8218759-8218778 | Msa0312970:intron | 25.0% |
| ! | CTATAATTATCAGCTAAGTA+CGG | + | chr2_4:8218893-8218912 | Msa0312970:intron | 25.0% |
| !!! | GTTCTAAAAGCATTAGATTT+TGG | + | chr2_4:8218985-8219004 | Msa0312970:intron | 25.0% |
| !!! | CTTTTGTTTTGATCAATCAA+TGG | + | chr2_4:8219011-8219030 | Msa0312970:intron | 25.0% |
| !!! | CAATCAATGGGATTTAATTT+TGG | + | chr2_4:8219024-8219043 | Msa0312970:intron | 25.0% |
| ! | TATTTCTTGAATAGCTTCTT+TGG | - | chr2_4:8219104-8219123 | None:intergenic | 25.0% |
| ! | ATTCAAGAAATAAAAAGCTG+TGG | + | chr2_4:8219112-8219131 | Msa0312970:CDS | 25.0% |
| ! | GGAAAGAAAGAAAATTGAAA+AGG | + | chr2_4:8219560-8219579 | Msa0312970:intron | 25.0% |
| ! | TCATGAATTTAAGTCTACTT+TGG | - | chr2_4:8219811-8219830 | None:intergenic | 25.0% |
| !! | CACACTATTCTTTTATAGAT+TGG | - | chr2_4:8219841-8219860 | None:intergenic | 25.0% |
| ! | GTGATATATGCTATTAGATT+AGG | - | chr2_4:8219943-8219962 | None:intergenic | 25.0% |
| ! | TATATCACAATTAACTATGC+AGG | + | chr2_4:8219955-8219974 | Msa0312970:intron | 25.0% |
| ! | ATATCACAATTAACTATGCA+GGG | + | chr2_4:8219956-8219975 | Msa0312970:intron | 25.0% |
| ! | ACAATACAAATCCAAAGAAA+GGG | + | chr2_4:8220004-8220023 | Msa0312970:CDS | 25.0% |
| !!! | CACTGCATAATATTTTGATT+AGG | - | chr2_4:8220158-8220177 | None:intergenic | 25.0% |
| !!! | TTTATCCTTCATGCATTTTT+TGG | - | chr2_4:8220184-8220203 | None:intergenic | 25.0% |
| ! | AAGGATAAAAAAATGCACAT+GGG | + | chr2_4:8220195-8220214 | Msa0312970:CDS | 25.0% |
| ! | AATAACAAAGCCAAAATCAA+AGG | + | chr2_4:8220317-8220336 | Msa0312970:CDS | 25.0% |
| ! | CAATAAATCAATAGTCAACA+TGG | - | chr2_4:8220346-8220365 | None:intergenic | 25.0% |
| !!! | CATGTTGACTATTGATTTAT+TGG | + | chr2_4:8220344-8220363 | Msa0312970:CDS | 25.0% |
| !!! | GTCATTTTGCATTTTTGTTA+TGG | + | chr2_4:8220450-8220469 | Msa0312970:three_prime_UTR | 25.0% |
| !! | TAATTTTCACCAAAGAAAAG+AGG | - | chr2_4:8220491-8220510 | None:intergenic | 25.0% |
| !! | CTTTTCTTTGGTGAAAATTA+AGG | + | chr2_4:8220491-8220510 | Msa0312970:three_prime_UTR | 25.0% |
| ! | CTTTGAGAAAACAAGAATCA+TGG | + | chr2_4:8218421-8218440 | Msa0312970:exon | 30.0% |
| TCTATGTCATTCACTTGAAA+TGG | + | chr2_4:8218610-8218629 | Msa0312970:CDS | 30.0% | |
| ! | TCATTCACTTGAAATGGATT+TGG | + | chr2_4:8218616-8218635 | Msa0312970:CDS | 30.0% |
| ! | GTTAGTGTGATTTTATGTTG+AGG | + | chr2_4:8218758-8218777 | Msa0312970:intron | 30.0% |
| !!! | CTAAAAGCATTAGATTTTGG+AGG | + | chr2_4:8218988-8219007 | Msa0312970:intron | 30.0% |
| GTTCATTAGAGACAAAGATA+AGG | + | chr2_4:8219071-8219090 | Msa0312970:CDS | 30.0% | |
| AATGAATAACATGTACCTGA+TGG | - | chr2_4:8219283-8219302 | None:intergenic | 30.0% | |
| TATGAAAAGCAATATTGTGG+TGG | + | chr2_4:8219387-8219406 | Msa0312970:intron | 30.0% | |
| ATGAAAAGCAATATTGTGGT+GGG | + | chr2_4:8219388-8219407 | Msa0312970:intron | 30.0% | |
| !!! | TATTTTTTGGTGGGTGAAAA+GGG | - | chr2_4:8219460-8219479 | None:intergenic | 30.0% |
| !!! | TTATTTTTTGGTGGGTGAAA+AGG | - | chr2_4:8219461-8219480 | None:intergenic | 30.0% |
| GGAAATGAATAGATTCTTCA+TGG | + | chr2_4:8219539-8219558 | Msa0312970:intron | 30.0% | |
| ACGTTAAATGTTTCAGATTG+AGG | - | chr2_4:8219632-8219651 | None:intergenic | 30.0% | |
| GAATTTAAGTCTACTTTGGT+TGG | - | chr2_4:8219807-8219826 | None:intergenic | 30.0% | |
| TATCACAATTAACTATGCAG+GGG | + | chr2_4:8219957-8219976 | Msa0312970:intron | 30.0% | |
| GACAATACAAATCCAAAGAA+AGG | + | chr2_4:8220003-8220022 | Msa0312970:CDS | 30.0% | |
| CAATACAAATCCAAAGAAAG+GGG | + | chr2_4:8220005-8220024 | Msa0312970:CDS | 30.0% | |
| GAAGGATAAAAAAATGCACA+TGG | + | chr2_4:8220194-8220213 | Msa0312970:CDS | 30.0% | |
| AGGATAAAAAAATGCACATG+GGG | + | chr2_4:8220196-8220215 | Msa0312970:CDS | 30.0% | |
| AAGGTTGTGTGATTGTAAAA+AGG | + | chr2_4:8220399-8220418 | Msa0312970:exon | 30.0% | |
| ! | TCTTTTGTTCCTCTTTTCTT+TGG | + | chr2_4:8220479-8220498 | Msa0312970:three_prime_UTR | 30.0% |
| GATTTACATACAAGTATGTG+GGG | - | chr2_4:8220541-8220560 | None:intergenic | 30.0% | |
| CGATTTACATACAAGTATGT+GGG | - | chr2_4:8220542-8220561 | None:intergenic | 30.0% | |
| ! | CTTTGAGAAAACAAGAATCA+TGG | + | chr2_4:8218421-8218440 | Msa0312970:exon | 30.0% |
| TCTATGTCATTCACTTGAAA+TGG | + | chr2_4:8218610-8218629 | Msa0312970:CDS | 30.0% | |
| ! | TCATTCACTTGAAATGGATT+TGG | + | chr2_4:8218616-8218635 | Msa0312970:CDS | 30.0% |
| ! | GTTAGTGTGATTTTATGTTG+AGG | + | chr2_4:8218758-8218777 | Msa0312970:intron | 30.0% |
| !!! | CTAAAAGCATTAGATTTTGG+AGG | + | chr2_4:8218988-8219007 | Msa0312970:intron | 30.0% |
| GTTCATTAGAGACAAAGATA+AGG | + | chr2_4:8219071-8219090 | Msa0312970:CDS | 30.0% | |
| AATGAATAACATGTACCTGA+TGG | - | chr2_4:8219283-8219302 | None:intergenic | 30.0% | |
| TATGAAAAGCAATATTGTGG+TGG | + | chr2_4:8219387-8219406 | Msa0312970:intron | 30.0% | |
| ATGAAAAGCAATATTGTGGT+GGG | + | chr2_4:8219388-8219407 | Msa0312970:intron | 30.0% | |
| !!! | TATTTTTTGGTGGGTGAAAA+GGG | - | chr2_4:8219460-8219479 | None:intergenic | 30.0% |
| !!! | TTATTTTTTGGTGGGTGAAA+AGG | - | chr2_4:8219461-8219480 | None:intergenic | 30.0% |
| GGAAATGAATAGATTCTTCA+TGG | + | chr2_4:8219539-8219558 | Msa0312970:intron | 30.0% | |
| ACGTTAAATGTTTCAGATTG+AGG | - | chr2_4:8219632-8219651 | None:intergenic | 30.0% | |
| GAATTTAAGTCTACTTTGGT+TGG | - | chr2_4:8219807-8219826 | None:intergenic | 30.0% | |
| TATCACAATTAACTATGCAG+GGG | + | chr2_4:8219957-8219976 | Msa0312970:intron | 30.0% | |
| GACAATACAAATCCAAAGAA+AGG | + | chr2_4:8220003-8220022 | Msa0312970:CDS | 30.0% | |
| CAATACAAATCCAAAGAAAG+GGG | + | chr2_4:8220005-8220024 | Msa0312970:CDS | 30.0% | |
| GAAGGATAAAAAAATGCACA+TGG | + | chr2_4:8220194-8220213 | Msa0312970:CDS | 30.0% | |
| AGGATAAAAAAATGCACATG+GGG | + | chr2_4:8220196-8220215 | Msa0312970:CDS | 30.0% | |
| AAGGTTGTGTGATTGTAAAA+AGG | + | chr2_4:8220399-8220418 | Msa0312970:exon | 30.0% | |
| ! | TCTTTTGTTCCTCTTTTCTT+TGG | + | chr2_4:8220479-8220498 | Msa0312970:three_prime_UTR | 30.0% |
| GATTTACATACAAGTATGTG+GGG | - | chr2_4:8220541-8220560 | None:intergenic | 30.0% | |
| CGATTTACATACAAGTATGT+GGG | - | chr2_4:8220542-8220561 | None:intergenic | 30.0% | |
| TTCTTGAATAGCTTCTTTGG+TGG | - | chr2_4:8219101-8219120 | None:intergenic | 35.0% | |
| GTGCTATCTGCAAAACAAAA+TGG | + | chr2_4:8219239-8219258 | Msa0312970:CDS | 35.0% | |
| ACTTCATCAGATATTCCATC+AGG | + | chr2_4:8219265-8219284 | Msa0312970:CDS | 35.0% | |
| ! | AAGTCTACTTTGGTTGGTAT+TGG | - | chr2_4:8219801-8219820 | None:intergenic | 35.0% |
| ATAGGTACATGCAAGCTAAA+TGG | + | chr2_4:8220232-8220251 | Msa0312970:CDS | 35.0% | |
| TACATGCAAGCTAAATGGTT+GGG | + | chr2_4:8220237-8220256 | Msa0312970:CDS | 35.0% | |
| ! | GTTGAAGTGTTCCTTTCAAA+TGG | - | chr2_4:8220264-8220283 | None:intergenic | 35.0% |
| !! | AACATGGATGCCTTTGATTT+TGG | - | chr2_4:8220330-8220349 | None:intergenic | 35.0% |
| GCGATTTACATACAAGTATG+TGG | - | chr2_4:8220543-8220562 | None:intergenic | 35.0% | |
| TTCTTGAATAGCTTCTTTGG+TGG | - | chr2_4:8219101-8219120 | None:intergenic | 35.0% | |
| GTGCTATCTGCAAAACAAAA+TGG | + | chr2_4:8219239-8219258 | Msa0312970:CDS | 35.0% | |
| ACTTCATCAGATATTCCATC+AGG | + | chr2_4:8219265-8219284 | Msa0312970:CDS | 35.0% | |
| ! | AAGTCTACTTTGGTTGGTAT+TGG | - | chr2_4:8219801-8219820 | None:intergenic | 35.0% |
| ATAGGTACATGCAAGCTAAA+TGG | + | chr2_4:8220232-8220251 | Msa0312970:CDS | 35.0% | |
| TACATGCAAGCTAAATGGTT+GGG | + | chr2_4:8220237-8220256 | Msa0312970:CDS | 35.0% | |
| ! | GTTGAAGTGTTCCTTTCAAA+TGG | - | chr2_4:8220264-8220283 | None:intergenic | 35.0% |
| !! | AACATGGATGCCTTTGATTT+TGG | - | chr2_4:8220330-8220349 | None:intergenic | 35.0% |
| GCGATTTACATACAAGTATG+TGG | - | chr2_4:8220543-8220562 | None:intergenic | 35.0% | |
| TATCCTGACGATTAATCGTC+AGG | - | chr2_4:8218481-8218500 | None:intergenic | 40.0% | |
| TACTGACGAAGTGATCATGT+CGG | + | chr2_4:8218565-8218584 | Msa0312970:CDS | 40.0% | |
| ! | GGATTTGGATGATGATGAAG+AGG | + | chr2_4:8218631-8218650 | Msa0312970:CDS | 40.0% |
| ! | TGGATGATGATGAAGAGGAA+AGG | + | chr2_4:8218636-8218655 | Msa0312970:CDS | 40.0% |
| ! | GGATGATGATGAAGAGGAAA+GGG | + | chr2_4:8218637-8218656 | Msa0312970:CDS | 40.0% |
| AAAGCTTCGGTTCTTCTCAA+TGG | - | chr2_4:8218675-8218694 | None:intergenic | 40.0% | |
| ! | TTGAGAAGAACCGAAGCTTT+TGG | + | chr2_4:8218675-8218694 | Msa0312970:CDS | 40.0% |
| ! | TGAGAAGAACCGAAGCTTTT+GGG | + | chr2_4:8218676-8218695 | Msa0312970:CDS | 40.0% |
| !! | TTTTGGGAAAGCCAACATCT+TGG | + | chr2_4:8218692-8218711 | Msa0312970:CDS | 40.0% |
| CTGCAAAAACTGCTTGATGA+GGG | + | chr2_4:8219180-8219199 | Msa0312970:CDS | 40.0% | |
| !! | TGTGGTGGGTCTAATAAGAT+AGG | + | chr2_4:8219402-8219421 | Msa0312970:intron | 40.0% |
| AATGATGCTCTTGTGGTAAG+AGG | + | chr2_4:8219496-8219515 | Msa0312970:intron | 40.0% | |
| ATGATGCTCTTGTGGTAAGA+GGG | + | chr2_4:8219497-8219516 | Msa0312970:intron | 40.0% | |
| ACTTCACTCTATCGACATAG+AGG | + | chr2_4:8219763-8219782 | Msa0312970:intron | 40.0% | |
| CTTCACTCTATCGACATAGA+GGG | + | chr2_4:8219764-8219783 | Msa0312970:intron | 40.0% | |
| ATCCAAAGAAAGGGGAAGTA+AGG | + | chr2_4:8220013-8220032 | Msa0312970:CDS | 40.0% | |
| ATCCTTACTTCCCCTTTCTT+TGG | - | chr2_4:8220018-8220037 | None:intergenic | 40.0% | |
| TTTCCAAGCTGAGTTTGAGA+TGG | + | chr2_4:8220053-8220072 | Msa0312970:CDS | 40.0% | |
| TACTTTCCCAACAAACACCT+CGG | - | chr2_4:8220121-8220140 | None:intergenic | 40.0% | |
| TGTTGGGAAAGTAGAGAGAT+TGG | + | chr2_4:8220128-8220147 | Msa0312970:CDS | 40.0% | |
| GTTGGGAAAGTAGAGAGATT+GGG | + | chr2_4:8220129-8220148 | Msa0312970:CDS | 40.0% | |
| TGCAGCCAAAAAATGCATGA+AGG | + | chr2_4:8220176-8220195 | Msa0312970:CDS | 40.0% | |
| GTACATGCAAGCTAAATGGT+TGG | + | chr2_4:8220236-8220255 | Msa0312970:CDS | 40.0% | |
| AATGGTTGGGTCCATTTGAA+AGG | + | chr2_4:8220250-8220269 | Msa0312970:CDS | 40.0% | |
| TTCAACAACTCCTCTTCCAA+TGG | + | chr2_4:8220278-8220297 | Msa0312970:CDS | 40.0% | |
| TCAACAACTCCTCTTCCAAT+GGG | + | chr2_4:8220279-8220298 | Msa0312970:CDS | 40.0% | |
| TCAGAAATTCCCATTGGAAG+AGG | - | chr2_4:8220291-8220310 | None:intergenic | 40.0% | |
| TTCCAATGGGAATTTCTGAG+AGG | + | chr2_4:8220292-8220311 | Msa0312970:CDS | 40.0% | |
| ATCCTCTCAGAAATTCCCAT+TGG | - | chr2_4:8220297-8220316 | None:intergenic | 40.0% | |
| ATTGCATTGCACAGCTGTTA+AGG | + | chr2_4:8220380-8220399 | Msa0312970:CDS | 40.0% | |
| TATCCTGACGATTAATCGTC+AGG | - | chr2_4:8218481-8218500 | None:intergenic | 40.0% | |
| TACTGACGAAGTGATCATGT+CGG | + | chr2_4:8218565-8218584 | Msa0312970:CDS | 40.0% | |
| ! | GGATTTGGATGATGATGAAG+AGG | + | chr2_4:8218631-8218650 | Msa0312970:CDS | 40.0% |
| ! | TGGATGATGATGAAGAGGAA+AGG | + | chr2_4:8218636-8218655 | Msa0312970:CDS | 40.0% |
| ! | GGATGATGATGAAGAGGAAA+GGG | + | chr2_4:8218637-8218656 | Msa0312970:CDS | 40.0% |
| AAAGCTTCGGTTCTTCTCAA+TGG | - | chr2_4:8218675-8218694 | None:intergenic | 40.0% | |
| ! | TTGAGAAGAACCGAAGCTTT+TGG | + | chr2_4:8218675-8218694 | Msa0312970:CDS | 40.0% |
| ! | TGAGAAGAACCGAAGCTTTT+GGG | + | chr2_4:8218676-8218695 | Msa0312970:CDS | 40.0% |
| !! | TTTTGGGAAAGCCAACATCT+TGG | + | chr2_4:8218692-8218711 | Msa0312970:CDS | 40.0% |
| CTGCAAAAACTGCTTGATGA+GGG | + | chr2_4:8219180-8219199 | Msa0312970:CDS | 40.0% | |
| !! | TGTGGTGGGTCTAATAAGAT+AGG | + | chr2_4:8219402-8219421 | Msa0312970:intron | 40.0% |
| AATGATGCTCTTGTGGTAAG+AGG | + | chr2_4:8219496-8219515 | Msa0312970:intron | 40.0% | |
| ATGATGCTCTTGTGGTAAGA+GGG | + | chr2_4:8219497-8219516 | Msa0312970:intron | 40.0% | |
| ACTTCACTCTATCGACATAG+AGG | + | chr2_4:8219763-8219782 | Msa0312970:intron | 40.0% | |
| CTTCACTCTATCGACATAGA+GGG | + | chr2_4:8219764-8219783 | Msa0312970:intron | 40.0% | |
| ATCCAAAGAAAGGGGAAGTA+AGG | + | chr2_4:8220013-8220032 | Msa0312970:CDS | 40.0% | |
| ATCCTTACTTCCCCTTTCTT+TGG | - | chr2_4:8220018-8220037 | None:intergenic | 40.0% | |
| TTTCCAAGCTGAGTTTGAGA+TGG | + | chr2_4:8220053-8220072 | Msa0312970:CDS | 40.0% | |
| TACTTTCCCAACAAACACCT+CGG | - | chr2_4:8220121-8220140 | None:intergenic | 40.0% | |
| TGTTGGGAAAGTAGAGAGAT+TGG | + | chr2_4:8220128-8220147 | Msa0312970:CDS | 40.0% | |
| GTTGGGAAAGTAGAGAGATT+GGG | + | chr2_4:8220129-8220148 | Msa0312970:CDS | 40.0% | |
| TGCAGCCAAAAAATGCATGA+AGG | + | chr2_4:8220176-8220195 | Msa0312970:CDS | 40.0% | |
| GTACATGCAAGCTAAATGGT+TGG | + | chr2_4:8220236-8220255 | Msa0312970:CDS | 40.0% | |
| AATGGTTGGGTCCATTTGAA+AGG | + | chr2_4:8220250-8220269 | Msa0312970:CDS | 40.0% | |
| TTCAACAACTCCTCTTCCAA+TGG | + | chr2_4:8220278-8220297 | Msa0312970:CDS | 40.0% | |
| TCAACAACTCCTCTTCCAAT+GGG | + | chr2_4:8220279-8220298 | Msa0312970:CDS | 40.0% | |
| TCAGAAATTCCCATTGGAAG+AGG | - | chr2_4:8220291-8220310 | None:intergenic | 40.0% | |
| TTCCAATGGGAATTTCTGAG+AGG | + | chr2_4:8220292-8220311 | Msa0312970:CDS | 40.0% | |
| ATCCTCTCAGAAATTCCCAT+TGG | - | chr2_4:8220297-8220316 | None:intergenic | 40.0% | |
| ATTGCATTGCACAGCTGTTA+AGG | + | chr2_4:8220380-8220399 | Msa0312970:CDS | 40.0% | |
| ! | AATCATGGGTGTTACCTCCT+TGG | + | chr2_4:8218436-8218455 | Msa0312970:exon | 45.0% |
| CAGGAACCTAGTAGACTTTC+TGG | - | chr2_4:8218462-8218481 | None:intergenic | 45.0% | |
| GTTCCTGACGATTAATCGTC+AGG | + | chr2_4:8218475-8218494 | Msa0312970:CDS | 45.0% | |
| CAATCTTCAGACACGAGTGT+TGG | + | chr2_4:8218518-8218537 | Msa0312970:CDS | 45.0% | |
| ACTGACGAAGTGATCATGTC+GGG | + | chr2_4:8218566-8218585 | Msa0312970:CDS | 45.0% | |
| !! | GTTGGCTTTCCCAAAAGCTT+CGG | - | chr2_4:8218688-8218707 | None:intergenic | 45.0% |
| TGGCTGCAACAGAAAGATGA+TGG | + | chr2_4:8219144-8219163 | Msa0312970:CDS | 45.0% | |
| GGCTGCAACAGAAAGATGAT+GGG | + | chr2_4:8219145-8219164 | Msa0312970:CDS | 45.0% | |
| ! | CATCAAGCAGTTTTTGCAGG+TGG | - | chr2_4:8219179-8219198 | None:intergenic | 45.0% |
| ! | CCTCATCAAGCAGTTTTTGC+AGG | - | chr2_4:8219182-8219201 | None:intergenic | 45.0% |
| CCTGCAAAAACTGCTTGATG+AGG | + | chr2_4:8219179-8219198 | Msa0312970:CDS | 45.0% | |
| TGATGAGGGAAGTTTCTACG+AGG | + | chr2_4:8219194-8219213 | Msa0312970:CDS | 45.0% | |
| TCTACGAGGCTTCAGAAATC+TGG | + | chr2_4:8219208-8219227 | Msa0312970:CDS | 45.0% | |
| AGTGGTGAATGATGCTCTTG+TGG | + | chr2_4:8219489-8219508 | Msa0312970:intron | 45.0% | |
| TCGATAGAGTGAAGTCATCG+CGG | - | chr2_4:8219758-8219777 | None:intergenic | 45.0% | |
| ! | TGCAGGGGAACACACATTTT+TGG | + | chr2_4:8219972-8219991 | Msa0312970:intron | 45.0% |
| TTGCCATCTCAAACTCAGCT+TGG | - | chr2_4:8220059-8220078 | None:intergenic | 45.0% | |
| ! | AAGCTGAGTTTGAGATGGCA+AGG | + | chr2_4:8220058-8220077 | Msa0312970:CDS | 45.0% |
| ! | AGCTGAGTTTGAGATGGCAA+GGG | + | chr2_4:8220059-8220078 | Msa0312970:CDS | 45.0% |
| ACTTTCCCAACAAACACCTC+GGG | - | chr2_4:8220120-8220139 | None:intergenic | 45.0% | |
| AAAAAATGCACATGGGGCCA+TGG | + | chr2_4:8220202-8220221 | Msa0312970:CDS | 45.0% | |
| ATGTACCTATGCTTCCTCCA+TGG | - | chr2_4:8220222-8220241 | None:intergenic | 45.0% | |
| ACAGCTGTGCAATGCAATGT+TGG | - | chr2_4:8220378-8220397 | None:intergenic | 45.0% | |
| ! | AATCATGGGTGTTACCTCCT+TGG | + | chr2_4:8218436-8218455 | Msa0312970:exon | 45.0% |
| CAGGAACCTAGTAGACTTTC+TGG | - | chr2_4:8218462-8218481 | None:intergenic | 45.0% | |
| GTTCCTGACGATTAATCGTC+AGG | + | chr2_4:8218475-8218494 | Msa0312970:CDS | 45.0% | |
| CAATCTTCAGACACGAGTGT+TGG | + | chr2_4:8218518-8218537 | Msa0312970:CDS | 45.0% | |
| ACTGACGAAGTGATCATGTC+GGG | + | chr2_4:8218566-8218585 | Msa0312970:CDS | 45.0% | |
| !! | GTTGGCTTTCCCAAAAGCTT+CGG | - | chr2_4:8218688-8218707 | None:intergenic | 45.0% |
| TGGCTGCAACAGAAAGATGA+TGG | + | chr2_4:8219144-8219163 | Msa0312970:CDS | 45.0% | |
| GGCTGCAACAGAAAGATGAT+GGG | + | chr2_4:8219145-8219164 | Msa0312970:CDS | 45.0% | |
| ! | CATCAAGCAGTTTTTGCAGG+TGG | - | chr2_4:8219179-8219198 | None:intergenic | 45.0% |
| ! | CCTCATCAAGCAGTTTTTGC+AGG | - | chr2_4:8219182-8219201 | None:intergenic | 45.0% |
| CCTGCAAAAACTGCTTGATG+AGG | + | chr2_4:8219179-8219198 | Msa0312970:CDS | 45.0% | |
| TGATGAGGGAAGTTTCTACG+AGG | + | chr2_4:8219194-8219213 | Msa0312970:CDS | 45.0% | |
| TCTACGAGGCTTCAGAAATC+TGG | + | chr2_4:8219208-8219227 | Msa0312970:CDS | 45.0% | |
| AGTGGTGAATGATGCTCTTG+TGG | + | chr2_4:8219489-8219508 | Msa0312970:intron | 45.0% | |
| TCGATAGAGTGAAGTCATCG+CGG | - | chr2_4:8219758-8219777 | None:intergenic | 45.0% | |
| ! | TGCAGGGGAACACACATTTT+TGG | + | chr2_4:8219972-8219991 | Msa0312970:intron | 45.0% |
| TTGCCATCTCAAACTCAGCT+TGG | - | chr2_4:8220059-8220078 | None:intergenic | 45.0% | |
| ! | AAGCTGAGTTTGAGATGGCA+AGG | + | chr2_4:8220058-8220077 | Msa0312970:CDS | 45.0% |
| ! | AGCTGAGTTTGAGATGGCAA+GGG | + | chr2_4:8220059-8220078 | Msa0312970:CDS | 45.0% |
| ACTTTCCCAACAAACACCTC+GGG | - | chr2_4:8220120-8220139 | None:intergenic | 45.0% | |
| AAAAAATGCACATGGGGCCA+TGG | + | chr2_4:8220202-8220221 | Msa0312970:CDS | 45.0% | |
| ATGTACCTATGCTTCCTCCA+TGG | - | chr2_4:8220222-8220241 | None:intergenic | 45.0% | |
| ACAGCTGTGCAATGCAATGT+TGG | - | chr2_4:8220378-8220397 | None:intergenic | 45.0% | |
| !!! | TGAATTTTTAATATTATATA+TGG | + | chr2_4:8218731-8218750 | Msa0312970:intron | 5.0% |
| !!! | TGAATTTTTAATATTATATA+TGG | + | chr2_4:8218731-8218750 | Msa0312970:intron | 5.0% |
| ! | AGTAGACTTTCTGGCCAAGG+AGG | - | chr2_4:8218453-8218472 | None:intergenic | 50.0% |
| ! | CCTAGTAGACTTTCTGGCCA+AGG | - | chr2_4:8218456-8218475 | None:intergenic | 50.0% |
| CCTTGGCCAGAAAGTCTACT+AGG | + | chr2_4:8218453-8218472 | Msa0312970:CDS | 50.0% | |
| CAGGATAGTCTCGAGTCTGA+AGG | + | chr2_4:8218494-8218513 | Msa0312970:CDS | 50.0% | |
| ! | AAGCCAACATCTTGGTGTGC+AGG | + | chr2_4:8218700-8218719 | Msa0312970:CDS | 50.0% |
| TCACCTGCACACCAAGATGT+TGG | - | chr2_4:8218706-8218725 | None:intergenic | 50.0% | |
| AAAAGCTGTGGAGCAGTGTG+TGG | + | chr2_4:8219124-8219143 | Msa0312970:CDS | 50.0% | |
| ! | GCAGTTTTTGCAGGTGGTGA+TGG | - | chr2_4:8219173-8219192 | None:intergenic | 50.0% |
| ! | GCTGAGTTTGAGATGGCAAG+GGG | + | chr2_4:8220060-8220079 | Msa0312970:CDS | 50.0% |
| ! | AGTAGACTTTCTGGCCAAGG+AGG | - | chr2_4:8218453-8218472 | None:intergenic | 50.0% |
| ! | CCTAGTAGACTTTCTGGCCA+AGG | - | chr2_4:8218456-8218475 | None:intergenic | 50.0% |
| CCTTGGCCAGAAAGTCTACT+AGG | + | chr2_4:8218453-8218472 | Msa0312970:CDS | 50.0% | |
| CAGGATAGTCTCGAGTCTGA+AGG | + | chr2_4:8218494-8218513 | Msa0312970:CDS | 50.0% | |
| ! | AAGCCAACATCTTGGTGTGC+AGG | + | chr2_4:8218700-8218719 | Msa0312970:CDS | 50.0% |
| TCACCTGCACACCAAGATGT+TGG | - | chr2_4:8218706-8218725 | None:intergenic | 50.0% | |
| AAAAGCTGTGGAGCAGTGTG+TGG | + | chr2_4:8219124-8219143 | Msa0312970:CDS | 50.0% | |
| ! | GCAGTTTTTGCAGGTGGTGA+TGG | - | chr2_4:8219173-8219192 | None:intergenic | 50.0% |
| ! | GCTGAGTTTGAGATGGCAAG+GGG | + | chr2_4:8220060-8220079 | Msa0312970:CDS | 50.0% |
| ! | AAGCTGCCCGAGGTGTTTGT+TGG | + | chr2_4:8220111-8220130 | Msa0312970:CDS | 55.0% |
| ! | AGCTGCCCGAGGTGTTTGTT+GGG | + | chr2_4:8220112-8220131 | Msa0312970:CDS | 55.0% |
| AAATGCACATGGGGCCATGG+AGG | + | chr2_4:8220205-8220224 | Msa0312970:CDS | 55.0% | |
| ! | AAGCTGCCCGAGGTGTTTGT+TGG | + | chr2_4:8220111-8220130 | Msa0312970:CDS | 55.0% |
| ! | AGCTGCCCGAGGTGTTTGTT+GGG | + | chr2_4:8220112-8220131 | Msa0312970:CDS | 55.0% |
| AAATGCACATGGGGCCATGG+AGG | + | chr2_4:8220205-8220224 | Msa0312970:CDS | 55.0% | |
| ! | TGGGGCCATGGAGGAAGCAT+AGG | + | chr2_4:8220214-8220233 | Msa0312970:CDS | 60.0% |
| ! | TGGGGCCATGGAGGAAGCAT+AGG | + | chr2_4:8220214-8220233 | Msa0312970:CDS | 60.0% |
| ACTCGTGCAGAAGCTGCCCG+AGG | + | chr2_4:8220101-8220120 | Msa0312970:CDS | 65.0% | |
| ACTCGTGCAGAAGCTGCCCG+AGG | + | chr2_4:8220101-8220120 | Msa0312970:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 8218407 | 8220589 | 8218407 | ID=Msa0312970;Name=Msa0312970 |
| chr2_4 | mRNA | 8218407 | 8220589 | 8218407 | ID=Msa0312970-mRNA-1;Parent=Msa0312970;Name=Msa0312970-mRNA-1;_AED=0.37;_eAED=0.37;_QI=33|1|1|1|1|1|3|179|316 |
| chr2_4 | exon | 8218407 | 8218721 | 8218407 | ID=Msa0312970-mRNA-1:exon:3167;Parent=Msa0312970-mRNA-1 |
| chr2_4 | exon | 8219052 | 8219286 | 8219052 | ID=Msa0312970-mRNA-1:exon:3168;Parent=Msa0312970-mRNA-1 |
| chr2_4 | exon | 8219977 | 8220589 | 8219977 | ID=Msa0312970-mRNA-1:exon:3169;Parent=Msa0312970-mRNA-1 |
| chr2_4 | five_prime_UTR | 8218407 | 8218439 | 8218407 | ID=Msa0312970-mRNA-1:five_prime_utr;Parent=Msa0312970-mRNA-1 |
| chr2_4 | CDS | 8218440 | 8218721 | 8218440 | ID=Msa0312970-mRNA-1:cds;Parent=Msa0312970-mRNA-1 |
| chr2_4 | CDS | 8219052 | 8219286 | 8219052 | ID=Msa0312970-mRNA-1:cds;Parent=Msa0312970-mRNA-1 |
| chr2_4 | CDS | 8219977 | 8220410 | 8219977 | ID=Msa0312970-mRNA-1:cds;Parent=Msa0312970-mRNA-1 |
| chr2_4 | three_prime_UTR | 8220411 | 8220589 | 8220411 | ID=Msa0312970-mRNA-1:three_prime_utr;Parent=Msa0312970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
