Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158620 | XP_024627155.1 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 846 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158620 | sp|Q9LEC8|DHEB_NICPL | 89.781 | 411 | 42 | 0 | 1 | 411 | 1 | 411 | 0.0 | 776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158620 | A0A072U300 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 846 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092220 | Msa1158620 | 0.811297 | 7.512832e-51 | -8.615850e-47 |
| Msa0706080 | Msa1158620 | 0.805356 | 1.388789e-49 | -8.615850e-47 |
| Msa0716150 | Msa1158620 | 0.815068 | 1.117420e-51 | -8.615850e-47 |
| Msa0798790 | Msa1158620 | 0.818364 | 2.037364e-52 | -8.615850e-47 |
| Msa0837320 | Msa1158620 | 0.828354 | 9.419497e-55 | -8.615850e-47 |
| Msa1031730 | Msa1158620 | 0.834679 | 2.606823e-56 | -8.615850e-47 |
| Msa1070800 | Msa1158620 | 0.974551 | 2.345703e-138 | -8.615850e-47 |
| Msa0285900 | Msa1158620 | 0.804083 | 2.561221e-49 | -8.615850e-47 |
| Msa0312890 | Msa1158620 | 0.806506 | 7.959924e-50 | -8.615850e-47 |
| Msa0312950 | Msa1158620 | 0.812340 | 4.454332e-51 | -8.615850e-47 |
| Msa0312970 | Msa1158620 | 0.814118 | 1.813129e-51 | -8.615850e-47 |
| Msa0324820 | Msa1158620 | 0.802325 | 5.920147e-49 | -8.615850e-47 |
| Msa1118800 | Msa1158620 | 0.872475 | 3.091608e-67 | -8.615850e-47 |
| Msa1158620 | Msa1405510 | 0.810704 | 1.009892e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158620 | MtrunA17_Chr7g0253311 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 846 |
| Msa1158620 | MtrunA17_Chr6g0461461 | 90.754 | 411 | 38 | 0 | 1 | 411 | 1 | 411 | 0.0 | 788 |
| Msa1158620 | MtrunA17_Chr5g0399821 | 80.049 | 411 | 82 | 0 | 1 | 411 | 1 | 411 | 0.0 | 701 |
| Msa1158620 | MtrunA17_Chr4g0055521 | 80.292 | 411 | 81 | 0 | 1 | 411 | 1 | 411 | 0.0 | 699 |
| Msa1158620 | MtrunA17_Chr8g0341541 | 26.810 | 373 | 260 | 3 | 16 | 375 | 224 | 596 | 5.93e-35 | 136 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1158620 | AT5G18170.1 | 89.294 | 411 | 44 | 0 | 1 | 411 | 1 | 411 | 0.0 | 775 |
| Msa1158620 | AT3G03910.1 | 86.797 | 409 | 54 | 0 | 1 | 409 | 1 | 409 | 0.0 | 759 |
| Msa1158620 | AT5G07440.2 | 80.779 | 411 | 79 | 0 | 1 | 411 | 1 | 411 | 0.0 | 708 |
| Msa1158620 | AT5G07440.1 | 80.779 | 411 | 79 | 0 | 1 | 411 | 1 | 411 | 0.0 | 708 |
| Msa1158620 | AT3G03910.2 | 88.000 | 350 | 42 | 0 | 1 | 350 | 1 | 350 | 0.0 | 649 |
| Msa1158620 | AT5G07440.3 | 80.405 | 296 | 58 | 0 | 1 | 296 | 1 | 296 | 2.93e-180 | 504 |
| Msa1158620 | AT1G51720.1 | 28.333 | 360 | 248 | 4 | 26 | 375 | 237 | 596 | 1.50e-34 | 135 |
| Msa1158620 | AT1G51720.3 | 28.333 | 360 | 248 | 4 | 26 | 375 | 237 | 596 | 1.50e-34 | 135 |
| Msa1158620 | AT1G51720.2 | 28.981 | 314 | 213 | 4 | 26 | 329 | 237 | 550 | 3.93e-33 | 131 |
| Msa1158620 | AT1G51720.4 | 30.332 | 211 | 147 | 0 | 26 | 236 | 237 | 447 | 4.89e-24 | 104 |
Find 126 sgRNAs with CRISPR-Local
Find 451 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGTTGGCTTCTAGGCTTT+TGG | 0.210460 | 7_4:+48027574 | Msa1158620:CDS |
| AAAGTTTACTCATTCCATTT+AGG | 0.224265 | 7_4:+48027618 | Msa1158620:CDS |
| TTTACCTTGATTTCCCTAAA+TGG | 0.227128 | 7_4:-48027632 | None:intergenic |
| CAGAAAATTCATGATCTAAT+TGG | 0.230295 | 7_4:+48028319 | Msa1158620:CDS |
| GAGGCTTTGCTTAATGAGTA+TGG | 0.240150 | 7_4:+48028759 | Msa1158620:CDS |
| TGCAACGTGCCGTCATCTTT+TGG | 0.259995 | 7_4:-48027780 | None:intergenic |
| CCAGACATTTATGCAAATTC+AGG | 0.267573 | 7_4:+48029479 | Msa1158620:CDS |
| AATATTGTGTTAGGTTCTTC+TGG | 0.276657 | 7_4:+48027505 | Msa1158620:intron |
| TGTGTATTTGTTCAGGGTTT+TGG | 0.276809 | 7_4:+48028886 | Msa1158620:intron |
| TTAGGTTCTTCTGGTTGGTT+AGG | 0.285843 | 7_4:+48027514 | Msa1158620:intron |
| AGGGTTCCATGTACTATTCT+TGG | 0.286689 | 7_4:+48030143 | Msa1158620:three_prime_UTR |
| AAGTTTACTCATTCCATTTA+GGG | 0.289477 | 7_4:+48027619 | Msa1158620:CDS |
| GGCACGTTGCAATCTTATAT+TGG | 0.290304 | 7_4:+48027792 | Msa1158620:CDS |
| GGATGTTCCTGCACCTGATA+TGG | 0.292182 | 7_4:+48028351 | Msa1158620:CDS |
| AAAGAGCAGAAAGGAGTAAA+AGG | 0.295634 | 7_4:+48029036 | Msa1158620:CDS |
| TGGACAACGGTTCGTCATTC+AGG | 0.296438 | 7_4:+48028794 | Msa1158620:CDS |
| AGGCGAGTAGCCGTGAAATT+TGG | 0.313243 | 7_4:-48028554 | None:intergenic |
| GGAAAATGCAAATGAAATTA+AGG | 0.319621 | 7_4:+48029280 | Msa1158620:CDS |
| CGAATGGGAGCCTTCAGTTT+GGG | 0.326363 | 7_4:+48029932 | Msa1158620:CDS |
| TGTGGTCCTGTTCCCATATC+AGG | 0.339231 | 7_4:-48028364 | None:intergenic |
| GTATCTGATCCCTCCTTTCA+TGG | 0.345021 | 7_4:-48027847 | None:intergenic |
| GAGTATGGGAAGAGTTTATC+TGG | 0.356117 | 7_4:+48028774 | Msa1158620:CDS |
| CCTGAATTTGCATAAATGTC+TGG | 0.369176 | 7_4:-48029479 | None:intergenic |
| TAGCTACTTTGAGTGGGTTC+AGG | 0.371393 | 7_4:+48029514 | Msa1158620:CDS |
| CTCAAGCTTCCCAACCTCTA+AGG | 0.378052 | 7_4:-48029982 | None:intergenic |
| CCTTTGTCAAACTAGGATCT+TGG | 0.397168 | 7_4:+48028684 | Msa1158620:intron |
| TCACATTGCTTTGTTAAGCT+TGG | 0.398720 | 7_4:+48024118 | Msa1158620:five_prime_UTR |
| GAGATCTTGCCGTTGCTGCT+TGG | 0.411413 | 7_4:+48030002 | Msa1158620:exon |
| ATCAGGGTCAGTTGGGTGAT+TGG | 0.414618 | 7_4:-48029324 | None:intergenic |
| CACAATTAATTGATGAGAAA+GGG | 0.415300 | 7_4:+48028929 | Msa1158620:CDS |
| GATGAATATTCCAAATTTCA+CGG | 0.417046 | 7_4:+48028544 | Msa1158620:CDS |
| AAACCAACCTCATCAGCATC+AGG | 0.420307 | 7_4:-48029341 | None:intergenic |
| GCTAAAGCATTCACTTCATC+TGG | 0.423121 | 7_4:-48028172 | None:intergenic |
| TCTTCAAGTCATTATTGTAA+TGG | 0.424156 | 7_4:+48023788 | Msa1158620:five_prime_UTR |
| TCGAATGGGAGCCTTCAGTT+TGG | 0.426674 | 7_4:+48029931 | Msa1158620:CDS |
| ATTCTAAATCATTAAGCAAA+TGG | 0.428695 | 7_4:-48030175 | None:intergenic |
| GTTGCTGTTAGTGACATAAC+TGG | 0.429636 | 7_4:+48028961 | Msa1158620:CDS |
| TATCTGATCCCTCCTTTCAT+GGG | 0.433194 | 7_4:-48027846 | None:intergenic |
| GTCATTATTGTAATGGTTGA+AGG | 0.435906 | 7_4:+48023795 | Msa1158620:five_prime_UTR |
| TTGGTATGCTTGAGTAGGCT+AGG | 0.438375 | 7_4:-48029015 | None:intergenic |
| CCTCCTTTGGCACCACCATA+TGG | 0.438942 | 7_4:-48028232 | None:intergenic |
| AGGAGTCATGTTTGCAGCAG+AGG | 0.444045 | 7_4:+48028740 | Msa1158620:CDS |
| GGCTACTGTCCTTAGAGGTT+GGG | 0.445489 | 7_4:+48029973 | Msa1158620:CDS |
| GTTACACCCTATCCCTCCTT+TGG | 0.445729 | 7_4:-48028245 | None:intergenic |
| GCAAGGGCTACTGTCCTTAG+AGG | 0.449354 | 7_4:+48029968 | Msa1158620:CDS |
| CTAGGTAGAGACGCAGCTAC+AGG | 0.452561 | 7_4:+48028714 | Msa1158620:CDS |
| CATTCCATTTAGGGAAATCA+AGG | 0.454849 | 7_4:+48027628 | Msa1158620:CDS |
| GGTGGTGCCAAAGGAGGGAT+AGG | 0.455169 | 7_4:+48028238 | Msa1158620:CDS |
| TAGGTTCTTCTGGTTGGTTA+GGG | 0.457540 | 7_4:+48027515 | Msa1158620:intron |
| AATGCTTAATACTACGAACT+TGG | 0.469726 | 7_4:+48030245 | Msa1158620:three_prime_UTR |
| CCTGCACCTGATATGGGAAC+AGG | 0.473655 | 7_4:+48028358 | Msa1158620:CDS |
| GCTCTTTGGTATGCTTGAGT+AGG | 0.477879 | 7_4:-48029020 | None:intergenic |
| GCACAATTAATTGATGAGAA+AGG | 0.478092 | 7_4:+48028928 | Msa1158620:CDS |
| GGGCTACTGTCCTTAGAGGT+TGG | 0.478265 | 7_4:+48029972 | Msa1158620:CDS |
| TAGGATCTTGGTGGATCTCT+AGG | 0.481482 | 7_4:+48028696 | Msa1158620:intron |
| TTGTGTTAGGTTCTTCTGGT+TGG | 0.482513 | 7_4:+48027509 | Msa1158620:intron |
| AGAACATCCAAGGGTTTATG+TGG | 0.484407 | 7_4:+48029816 | Msa1158620:intron |
| CATCAGCATCAGGGTCAGTT+GGG | 0.486837 | 7_4:-48029331 | None:intergenic |
| TGGTATGCTTGAGTAGGCTA+GGG | 0.498740 | 7_4:-48029014 | None:intergenic |
| TTTAATCCCAGCAGCTCTTG+GGG | 0.499316 | 7_4:+48029116 | Msa1158620:CDS |
| ATGCACTAGCAGCTACAAAC+AGG | 0.499625 | 7_4:+48027546 | Msa1158620:CDS |
| TCATCAGCATCAGGGTCAGT+TGG | 0.504130 | 7_4:-48029332 | None:intergenic |
| TTACAGTTAGCTACTTTGAG+TGG | 0.504316 | 7_4:+48029507 | Msa1158620:CDS |
| AAAATTAGCAAAGGAAAATG+TGG | 0.504492 | 7_4:-48023726 | None:intergenic |
| TTTATCACTGATTAAAGATG+AGG | 0.512041 | 7_4:+48030123 | Msa1158620:three_prime_UTR |
| GCTGTAGCAAATATACCATA+TGG | 0.512729 | 7_4:+48028217 | Msa1158620:CDS |
| TCAGATATACTTAATTCTGA+AGG | 0.513027 | 7_4:-48028268 | None:intergenic |
| TACAGTTAGCTACTTTGAGT+GGG | 0.513952 | 7_4:+48029508 | Msa1158620:CDS |
| TGCATAGCTGCAGCCTGCAG+AGG | 0.514289 | 7_4:-48030270 | None:intergenic |
| TTGTCAAACTAGGATCTTGG+TGG | 0.524001 | 7_4:+48028687 | Msa1158620:intron |
| CTGAATTTGCATAAATGTCT+GGG | 0.526336 | 7_4:-48029478 | None:intergenic |
| AGAGACGCAGCTACAGGAAG+AGG | 0.528132 | 7_4:+48028720 | Msa1158620:CDS |
| CCTCATCCCACATAAACCCT+TGG | 0.528763 | 7_4:-48029823 | None:intergenic |
| AGCAATGTGAAACAAGTGAA+TGG | 0.530486 | 7_4:-48024105 | None:intergenic |
| TACGAACTTGGATCCTCTGC+AGG | 0.530748 | 7_4:+48030257 | Msa1158620:three_prime_UTR |
| TACTCGCCTGCAGTAGTGAC+TGG | 0.531361 | 7_4:+48028568 | Msa1158620:CDS |
| GATGTTCCTGCACCTGATAT+GGG | 0.534015 | 7_4:+48028352 | Msa1158620:CDS |
| CATGAATGTGATCTTCGAAT+GGG | 0.534362 | 7_4:+48029917 | Msa1158620:CDS |
| CCTGTTCCCATATCAGGTGC+AGG | 0.535228 | 7_4:-48028358 | None:intergenic |
| TGGGAGTTAACCGTGTGGCA+AGG | 0.538568 | 7_4:+48029951 | Msa1158620:CDS |
| CTTTAGCGCAACTAATGACA+TGG | 0.539793 | 7_4:+48028188 | Msa1158620:CDS |
| AGGCTTTGCTTAATGAGTAT+GGG | 0.540014 | 7_4:+48028760 | Msa1158620:CDS |
| TCATGAATGTGATCTTCGAA+TGG | 0.546441 | 7_4:+48029916 | Msa1158620:CDS |
| GGGAGTTAACCGTGTGGCAA+GGG | 0.549431 | 7_4:+48029952 | Msa1158620:CDS |
| CAGATATACTTAATTCTGAA+GGG | 0.559546 | 7_4:-48028267 | None:intergenic |
| CCAAGGGTTTATGTGGGATG+AGG | 0.562647 | 7_4:+48029823 | Msa1158620:CDS |
| TGATATACACAGAACATCCA+AGG | 0.564539 | 7_4:+48029806 | Msa1158620:intron |
| AATGCTAGAGGCCCCATGAA+AGG | 0.566074 | 7_4:+48027834 | Msa1158620:CDS |
| CCATATGGTGGTGCCAAAGG+AGG | 0.569654 | 7_4:+48028232 | Msa1158620:CDS |
| TTATCACTGATTAAAGATGA+GGG | 0.574898 | 7_4:+48030124 | Msa1158620:three_prime_UTR |
| GTAGAGCATAAAATTAGCAA+AGG | 0.574986 | 7_4:-48023735 | None:intergenic |
| AACTGACCCTGATGCTGATG+AGG | 0.577308 | 7_4:+48029334 | Msa1158620:CDS |
| TTCATCTAGTATCCATGCCA+TGG | 0.578541 | 7_4:-48028527 | None:intergenic |
| AAGCATACCAAAGAGCAGAA+AGG | 0.585412 | 7_4:+48029027 | Msa1158620:CDS |
| ATACCATATGGTGGTGCCAA+AGG | 0.586993 | 7_4:+48028229 | Msa1158620:CDS |
| CATATGGTGGTGCCAAAGGA+GGG | 0.588939 | 7_4:+48028233 | Msa1158620:CDS |
| ACAATTAATTGATGAGAAAG+GGG | 0.591091 | 7_4:+48028930 | Msa1158620:CDS |
| AAAGGAGTAAAAGGATTCCA+TGG | 0.591340 | 7_4:+48029045 | Msa1158620:CDS |
| ATCTGATCCCTCCTTTCATG+GGG | 0.594388 | 7_4:-48027845 | None:intergenic |
| GACATTTATGCAAATTCAGG+AGG | 0.596043 | 7_4:+48029482 | Msa1158620:CDS |
| GCTAGAGGCCCCATGAAAGG+AGG | 0.601353 | 7_4:+48027837 | Msa1158620:CDS |
| AAATTAGCAAAGGAAAATGT+GGG | 0.605601 | 7_4:-48023725 | None:intergenic |
| GTTAATCCAAGAATAGTACA+TGG | 0.612249 | 7_4:-48030149 | None:intergenic |
| GTGGTGCCAAAGGAGGGATA+GGG | 0.615069 | 7_4:+48028239 | Msa1158620:CDS |
| TGATATGGGAACAGGACCAC+AGG | 0.619474 | 7_4:+48028366 | Msa1158620:CDS |
| GTTCAACATGATAATGCTAG+AGG | 0.620110 | 7_4:+48027822 | Msa1158620:CDS |
| TGATCTAATTGGAACTCACA+TGG | 0.620887 | 7_4:+48028330 | Msa1158620:CDS |
| ACGGTTAACTCCCAAACTGA+AGG | 0.626019 | 7_4:-48029942 | None:intergenic |
| CTAGAGGCCCCATGAAAGGA+GGG | 0.628040 | 7_4:+48027838 | Msa1158620:CDS |
| TTAATCCCAGCAGCTCTTGG+GGG | 0.631328 | 7_4:+48029117 | Msa1158620:CDS |
| AACCAACCTCATCAGCATCA+GGG | 0.638651 | 7_4:-48029340 | None:intergenic |
| TATGAATGCAGACCATGGCA+TGG | 0.640845 | 7_4:+48028515 | Msa1158620:intron |
| GGAGCTATAAAGAACAGCAA+AGG | 0.646325 | 7_4:+48028982 | Msa1158620:CDS |
| GAATATAAATAACCTCAGGA+TGG | 0.651268 | 7_4:-48027869 | None:intergenic |
| GGACAGTAGCCCTTGCCACA+CGG | 0.653787 | 7_4:-48029961 | None:intergenic |
| TGTACCATTCCAAAAGATGA+CGG | 0.655126 | 7_4:+48027771 | Msa1158620:CDS |
| GAACATCCAAGGGTTTATGT+GGG | 0.659688 | 7_4:+48029817 | Msa1158620:intron |
| GGAAGAGTTTATCTGGACAA+CGG | 0.662918 | 7_4:+48028781 | Msa1158620:CDS |
| GATATACACAGAACATCCAA+GGG | 0.663024 | 7_4:+48029807 | Msa1158620:intron |
| AATCAAATGAATCACCACCA+TGG | 0.671603 | 7_4:-48029062 | None:intergenic |
| GTAGCAAATATACCATATGG+TGG | 0.679072 | 7_4:+48028220 | Msa1158620:CDS |
| CAATTAATTGATGAGAAAGG+GGG | 0.684422 | 7_4:+48028931 | Msa1158620:CDS |
| AATTTGCATAAATGTCTGGG+AGG | 0.710346 | 7_4:-48029475 | None:intergenic |
| CAGTTTGGGAGTTAACCGTG+TGG | 0.725194 | 7_4:+48029946 | Msa1158620:CDS |
| AGGGATCAGATACCATCCTG+AGG | 0.734957 | 7_4:+48027857 | Msa1158620:CDS |
| GGAGTAAAAGGATTCCATGG+TGG | 0.740248 | 7_4:+48029048 | Msa1158620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAATTCAATTAAAAAAAA+AGG | - | chr7_4:48024006-48024025 | None:intergenic | 10.0% |
| !!! | TTTTGTATTTAAATTAGTTA+GGG | + | chr7_4:48024646-48024665 | Msa1158620:intron | 10.0% |
| !!! | GATTTTATATAATTTTATGT+CGG | + | chr7_4:48025649-48025668 | Msa1158620:intron | 10.0% |
| !!! | TTGAATTATTTAAATTTTTC+GGG | - | chr7_4:48025724-48025743 | None:intergenic | 10.0% |
| !!! | TTGAATTATTTAAATTTTTC+GGG | - | chr7_4:48025724-48025743 | None:intergenic | 10.0% |
| !!! | ATATTAATATTAATTTTCGT+TGG | - | chr7_4:48026388-48026407 | None:intergenic | 10.0% |
| !! | AAAATTAATATAATCTACAT+AGG | + | chr7_4:48026476-48026495 | Msa1158620:intron | 10.0% |
| !!! | ATTTTATTGTATTATTCTTT+TGG | + | chr7_4:48029246-48029265 | Msa1158620:intron | 10.0% |
| !!! | TTTTTATTTTTTTTTTGCCT+TGG | + | chr7_4:48024584-48024603 | Msa1158620:intron | 15.0% |
| !!! | TTTTATTTTTTTTTTGCCTT+GGG | + | chr7_4:48024585-48024604 | Msa1158620:intron | 15.0% |
| !!! | GTTTTGTATTTAAATTAGTT+AGG | + | chr7_4:48024645-48024664 | Msa1158620:intron | 15.0% |
| !! | TTTGTATTTAAATTAGTTAG+GGG | + | chr7_4:48024647-48024666 | Msa1158620:intron | 15.0% |
| !! | AAAGTTACTAATTAAAACTA+GGG | - | chr7_4:48025427-48025446 | None:intergenic | 15.0% |
| !! | AAAAGTTACTAATTAAAACT+AGG | - | chr7_4:48025428-48025447 | None:intergenic | 15.0% |
| !!! | GATTTTATACAATTTTATGT+CGG | + | chr7_4:48025763-48025782 | Msa1158620:intron | 15.0% |
| !!! | ATATTTTCACATCAAAATTA+TGG | + | chr7_4:48026119-48026138 | Msa1158620:intron | 15.0% |
| !!! | TATTTTCACATCAAAATTAT+GGG | + | chr7_4:48026120-48026139 | Msa1158620:intron | 15.0% |
| !! | AGGATTTAATAATTGTAAAA+TGG | + | chr7_4:48026524-48026543 | Msa1158620:intron | 15.0% |
| !! | GGATTTAATAATTGTAAAAT+GGG | + | chr7_4:48026525-48026544 | Msa1158620:intron | 15.0% |
| !!! | TTAAGGTAATGTTTTAATTA+AGG | + | chr7_4:48027033-48027052 | Msa1158620:intron | 15.0% |
| !! | CAATTAATCATAAAAAGATT+AGG | - | chr7_4:48027230-48027249 | None:intergenic | 15.0% |
| !!! | CTAATCTTTTTATGATTAAT+TGG | + | chr7_4:48027228-48027247 | Msa1158620:intron | 15.0% |
| !! | ATATGTCATAAAATACAAAA+AGG | - | chr7_4:48027304-48027323 | None:intergenic | 15.0% |
| !! | AATATAAACTAGTAAAAGTA+TGG | - | chr7_4:48027328-48027347 | None:intergenic | 15.0% |
| !! | GATATAAATATTGTTAAAGA+TGG | + | chr7_4:48027381-48027400 | Msa1158620:intron | 15.0% |
| !! | AAAAAATCTTAATTACTAAG+TGG | + | chr7_4:48027899-48027918 | Msa1158620:intron | 15.0% |
| !!! | TTTTTTTTTTTTTGTATAGG+AGG | - | chr7_4:48027984-48028003 | None:intergenic | 15.0% |
| !!! | ATATGGATTAACATTATTTT+TGG | + | chr7_4:48028467-48028486 | Msa1158620:intron | 15.0% |
| !! | AACAAATTTAGAAAATTGAA+TGG | - | chr7_4:48028663-48028682 | None:intergenic | 15.0% |
| !! | CTAAAGTTAAATTATAACAA+AGG | + | chr7_4:48029208-48029227 | Msa1158620:intron | 15.0% |
| !!! | AATTAAACTTTGATTTCATA+TGG | + | chr7_4:48029555-48029574 | Msa1158620:intron | 15.0% |
| !! | AAAATAAAAAAAATGACACG+TGG | - | chr7_4:48024574-48024593 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTTTTTGCCTTG+GGG | + | chr7_4:48024586-48024605 | Msa1158620:intron | 20.0% |
| !! | TTGTATTTAAATTAGTTAGG+GGG | + | chr7_4:48024648-48024667 | Msa1158620:intron | 20.0% |
| !!! | CTTTTTAAAAGTTACGATTT+TGG | - | chr7_4:48024674-48024693 | None:intergenic | 20.0% |
| !!! | GTAACTTTTAAAAAGATAGA+GGG | + | chr7_4:48024679-48024698 | Msa1158620:intron | 20.0% |
| !! | GCAATTAAGCTTAAATTTAA+TGG | + | chr7_4:48024710-48024729 | Msa1158620:intron | 20.0% |
| !! | AACAGAAATAGGAAAAAATA+AGG | + | chr7_4:48025217-48025236 | Msa1158620:intron | 20.0% |
| !! | ACAGAAATAGGAAAAAATAA+GGG | + | chr7_4:48025218-48025237 | Msa1158620:intron | 20.0% |
| !!! | AACTAAGTAGTATAGTTTTA+AGG | + | chr7_4:48025360-48025379 | Msa1158620:intron | 20.0% |
| !!! | ACTAAGTAGTATAGTTTTAA+GGG | + | chr7_4:48025361-48025380 | Msa1158620:intron | 20.0% |
| !!! | GTTGATTATTTTATTTTTCC+GGG | - | chr7_4:48025608-48025627 | None:intergenic | 20.0% |
| !!! | CGTTGATTATTTTATTTTTC+CGG | - | chr7_4:48025609-48025628 | None:intergenic | 20.0% |
| !! | CGGAAAAATAAAATAATCAA+CGG | + | chr7_4:48025607-48025626 | Msa1158620:intron | 20.0% |
| !! | ATAAAATAATCAACGGTTAT+AGG | + | chr7_4:48025614-48025633 | Msa1158620:intron | 20.0% |
| !!! | TATAATTTTATGTCGGTTTT+AGG | + | chr7_4:48025656-48025675 | Msa1158620:intron | 20.0% |
| !!! | ATTATTTAAATTTTTCGGGT+GGG | - | chr7_4:48025720-48025739 | None:intergenic | 20.0% |
| !!! | AATTATTTAAATTTTTCGGG+TGG | - | chr7_4:48025721-48025740 | None:intergenic | 20.0% |
| !!! | TTTTCAACAGTTAATTTTAG+TGG | + | chr7_4:48025890-48025909 | Msa1158620:intron | 20.0% |
| !! | ATTAATTATTCAATGTACAG+TGG | - | chr7_4:48025944-48025963 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACAGATTTTT+AGG | - | chr7_4:48026013-48026032 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTGTTGTGTATT+TGG | + | chr7_4:48026081-48026100 | Msa1158620:intron | 20.0% |
| !! | ATAAATTAGTCCATCAAAAT+TGG | + | chr7_4:48026297-48026316 | Msa1158620:intron | 20.0% |
| !! | TAATATAATCTACATAGGAT+AGG | + | chr7_4:48026481-48026500 | Msa1158620:intron | 20.0% |
| !! | AATGGGTATATTATTATTAC+AGG | + | chr7_4:48026542-48026561 | Msa1158620:intron | 20.0% |
| !! | TATCAACAATTACAAAGTTA+TGG | + | chr7_4:48026681-48026700 | Msa1158620:intron | 20.0% |
| !! | TTGTTGTATTAGCAAATATT+TGG | + | chr7_4:48026931-48026950 | Msa1158620:intron | 20.0% |
| !!! | GTGTCATATTTTCAATAAAA+AGG | + | chr7_4:48026973-48026992 | Msa1158620:intron | 20.0% |
| !!! | TATTTTCAATAAAAAGGACA+AGG | + | chr7_4:48026979-48026998 | Msa1158620:intron | 20.0% |
| !!! | ATATATTTAGCATTTTCTAG+AGG | + | chr7_4:48027177-48027196 | Msa1158620:intron | 20.0% |
| !! | ATTAGAATATAAATAACCTC+AGG | - | chr7_4:48027876-48027895 | None:intergenic | 20.0% |
| !!! | ATTGTATTATTCTTTTGGTA+TGG | + | chr7_4:48029251-48029270 | Msa1158620:intron | 20.0% |
| !! | AAATGATTGAATGTAACAAT+AGG | - | chr7_4:48029660-48029679 | None:intergenic | 20.0% |
| !!! | CCAGTAATCATTTTAAAAAA+TGG | - | chr7_4:48029683-48029702 | None:intergenic | 20.0% |
| !!! | CCATTTTTTAAAATGATTAC+TGG | + | chr7_4:48029680-48029699 | Msa1158620:intron | 20.0% |
| !! | ATTCTAAATCATTAAGCAAA+TGG | - | chr7_4:48030178-48030197 | None:intergenic | 20.0% |
| ! | AAATTAGCAAAGGAAAATGT+GGG | - | chr7_4:48023728-48023747 | None:intergenic | 25.0% |
| ! | AAAATTAGCAAAGGAAAATG+TGG | - | chr7_4:48023729-48023748 | None:intergenic | 25.0% |
| ! | TCTTCAAGTCATTATTGTAA+TGG | + | chr7_4:48023788-48023807 | Msa1158620:five_prime_UTR | 25.0% |
| ! | CAGAATATGATGCTTAAATA+TGG | - | chr7_4:48023884-48023903 | None:intergenic | 25.0% |
| ! | GTCATATTTGCAAATTAACA+AGG | + | chr7_4:48023975-48023994 | Msa1158620:intron | 25.0% |
| ! | ATTGAATTAGATTCCTTGTT+TGG | + | chr7_4:48024015-48024034 | Msa1158620:intron | 25.0% |
| !! | TTGAATTAGATTCCTTGTTT+GGG | + | chr7_4:48024016-48024035 | Msa1158620:intron | 25.0% |
| ! | AACATACCAAAAAATGTAGA+GGG | - | chr7_4:48024154-48024173 | None:intergenic | 25.0% |
| ! | AAACATACCAAAAAATGTAG+AGG | - | chr7_4:48024155-48024174 | None:intergenic | 25.0% |
| !!! | ATCTTTTCTCAAGTTTTATG+TGG | + | chr7_4:48024227-48024246 | Msa1158620:intron | 25.0% |
| !!! | TTATTTTTTTTTTGCCTTGG+GGG | + | chr7_4:48024587-48024606 | Msa1158620:intron | 25.0% |
| !! | TATTGAATCTTTGACAGTTT+TGG | - | chr7_4:48024614-48024633 | None:intergenic | 25.0% |
| ! | TGTCAAAGATTCAATACTTA+GGG | + | chr7_4:48024618-48024637 | Msa1158620:intron | 25.0% |
| !!! | CGTAACTTTTAAAAAGATAG+AGG | + | chr7_4:48024678-48024697 | Msa1158620:intron | 25.0% |
| ! | AATCGAATAATAATACGACA+CGG | - | chr7_4:48024851-48024870 | None:intergenic | 25.0% |
| ! | TTAGGTACTATAACAGAAAT+AGG | + | chr7_4:48025206-48025225 | Msa1158620:intron | 25.0% |
| ! | AAACTATACTACTTAGTTAC+AGG | - | chr7_4:48025358-48025377 | None:intergenic | 25.0% |
| !!! | TTTTTTAGATACATTGACAG+TGG | + | chr7_4:48025546-48025565 | Msa1158620:intron | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr7_4:48026023-48026042 | Msa1158620:intron | 25.0% |
| ! | AAAAACAAAAAAGCCTTTGT+TGG | - | chr7_4:48026071-48026090 | None:intergenic | 25.0% |
| ! | GGGATAGAGATAAATATATA+CGG | + | chr7_4:48026144-48026163 | Msa1158620:intron | 25.0% |
| ! | AATTAACTCTTTCAAGGTTT+AGG | - | chr7_4:48026338-48026357 | None:intergenic | 25.0% |
| !!! | CTTTGAAATTAACTCTTTCA+AGG | - | chr7_4:48026344-48026363 | None:intergenic | 25.0% |
| ! | TCACTCAAATAAGTCAAATA+AGG | - | chr7_4:48026454-48026473 | None:intergenic | 25.0% |
| ! | ATAGGAGGATCTAATATTAT+AGG | + | chr7_4:48026499-48026518 | Msa1158620:intron | 25.0% |
| ! | AGGATCTAATATTATAGGAT+AGG | + | chr7_4:48026504-48026523 | Msa1158620:intron | 25.0% |
| ! | TAAATGTTCATACACATATG+TGG | + | chr7_4:48026653-48026672 | Msa1158620:intron | 25.0% |
| !! | ACTTTGTAATTGTTGATAAG+AGG | - | chr7_4:48026679-48026698 | None:intergenic | 25.0% |
| ! | TTACAAAGTTATGGATACAA+CGG | + | chr7_4:48026690-48026709 | Msa1158620:intron | 25.0% |
| ! | TGTATCTAAATGGAAATTGT+GGG | - | chr7_4:48026849-48026868 | None:intergenic | 25.0% |
| ! | AAGAAGCTAGAATATAAAAC+AGG | + | chr7_4:48027114-48027133 | Msa1158620:intron | 25.0% |
| !! | ATATTTGTTGACATTGACTA+TGG | + | chr7_4:48027343-48027362 | Msa1158620:intron | 25.0% |
| ! | AAAAGGTTGAATATTGTGTT+AGG | + | chr7_4:48027496-48027515 | Msa1158620:intron | 25.0% |
| !!! | TACAAACAGGAATTTTAAGT+TGG | + | chr7_4:48027559-48027578 | Msa1158620:CDS | 25.0% |
| ! | AAAGTTTACTCATTCCATTT+AGG | + | chr7_4:48027618-48027637 | Msa1158620:CDS | 25.0% |
| ! | AAGTTTACTCATTCCATTTA+GGG | + | chr7_4:48027619-48027638 | Msa1158620:CDS | 25.0% |
| !! | TTCTAGCAAATTTGTTTACT+AGG | + | chr7_4:48027677-48027696 | Msa1158620:intron | 25.0% |
| !! | AAACTGTTATGTGTGTTTTT+AGG | + | chr7_4:48028103-48028122 | Msa1158620:intron | 25.0% |
| ! | TCTGAATATGAATCGTTTAT+TGG | + | chr7_4:48028134-48028153 | Msa1158620:intron | 25.0% |
| ! | AATCGTTTATTGGAATGATT+AGG | + | chr7_4:48028144-48028163 | Msa1158620:intron | 25.0% |
| ! | CAGATATACTTAATTCTGAA+GGG | - | chr7_4:48028270-48028289 | None:intergenic | 25.0% |
| ! | TCAGATATACTTAATTCTGA+AGG | - | chr7_4:48028271-48028290 | None:intergenic | 25.0% |
| !! | AATTTTCTGAGTAAAAACTC+TGG | - | chr7_4:48028308-48028327 | None:intergenic | 25.0% |
| ! | CAGAAAATTCATGATCTAAT+TGG | + | chr7_4:48028319-48028338 | Msa1158620:CDS | 25.0% |
| ! | TTATACCATTGATGCAAATA+TGG | + | chr7_4:48028450-48028469 | Msa1158620:intron | 25.0% |
| ! | TTAATCCATATTTGCATCAA+TGG | - | chr7_4:48028458-48028477 | None:intergenic | 25.0% |
| ! | GATGAATATTCCAAATTTCA+CGG | + | chr7_4:48028544-48028563 | Msa1158620:CDS | 25.0% |
| ! | TGGAATCAATTACTTACTAT+AGG | - | chr7_4:48028598-48028617 | None:intergenic | 25.0% |
| ! | ATTGAATGGTTTATTAAGCA+TGG | - | chr7_4:48028649-48028668 | None:intergenic | 25.0% |
| ! | CACAATTAATTGATGAGAAA+GGG | + | chr7_4:48028929-48028948 | Msa1158620:CDS | 25.0% |
| ! | ACAATTAATTGATGAGAAAG+GGG | + | chr7_4:48028930-48028949 | Msa1158620:CDS | 25.0% |
| ! | GGAAAATGCAAATGAAATTA+AGG | + | chr7_4:48029280-48029299 | Msa1158620:CDS | 25.0% |
| !! | TTGCAGATTCTAAAGAAAAA+AGG | + | chr7_4:48029443-48029462 | Msa1158620:intron | 25.0% |
| ! | ATATTAAAGGCTTATTGAGA+GGG | + | chr7_4:48029626-48029645 | Msa1158620:intron | 25.0% |
| ! | TTGAATGTAACAATAGGTAT+TGG | - | chr7_4:48029654-48029673 | None:intergenic | 25.0% |
| ! | TAATATGTATTGCTCTTATG+TGG | + | chr7_4:48029774-48029793 | Msa1158620:intron | 25.0% |
| ! | AGCTAAAAAACTACATGAAT+AGG | + | chr7_4:48029861-48029880 | Msa1158620:CDS | 25.0% |
| ! | GCTAAAAAACTACATGAATA+GGG | + | chr7_4:48029862-48029881 | Msa1158620:CDS | 25.0% |
| ! | CTAAAAAACTACATGAATAG+GGG | + | chr7_4:48029863-48029882 | Msa1158620:CDS | 25.0% |
| !! | TTTATCACTGATTAAAGATG+AGG | + | chr7_4:48030123-48030142 | Msa1158620:three_prime_UTR | 25.0% |
| !! | TTATCACTGATTAAAGATGA+GGG | + | chr7_4:48030124-48030143 | Msa1158620:three_prime_UTR | 25.0% |
| !! | TCGTAGTATTAAGCATTTTA+AGG | - | chr7_4:48030242-48030261 | None:intergenic | 25.0% |
| GTAGAGCATAAAATTAGCAA+AGG | - | chr7_4:48023738-48023757 | None:intergenic | 30.0% | |
| GTCATTATTGTAATGGTTGA+AGG | + | chr7_4:48023795-48023814 | Msa1158620:five_prime_UTR | 30.0% | |
| GATGCTTAAATATGGTTAGA+GGG | - | chr7_4:48023876-48023895 | None:intergenic | 30.0% | |
| TGATGCTTAAATATGGTTAG+AGG | - | chr7_4:48023877-48023896 | None:intergenic | 30.0% | |
| AAGAATTGAATTCCCAAACA+AGG | - | chr7_4:48024031-48024050 | None:intergenic | 30.0% | |
| !!! | TTATTCTCCCATTGTTTTTG+TGG | + | chr7_4:48024049-48024068 | Msa1158620:intron | 30.0% |
| !!! | TATTCTCCCATTGTTTTTGT+GGG | + | chr7_4:48024050-48024069 | Msa1158620:intron | 30.0% |
| TAAGAACCCACAAAAACAAT+GGG | - | chr7_4:48024059-48024078 | None:intergenic | 30.0% | |
| TTAAGAACCCACAAAAACAA+TGG | - | chr7_4:48024060-48024079 | None:intergenic | 30.0% | |
| AAATATGCAATGCAAAGATG+AGG | - | chr7_4:48024373-48024392 | None:intergenic | 30.0% | |
| !!! | TTTTGCTTTGAAACTCTTGA+TGG | + | chr7_4:48024390-48024409 | Msa1158620:intron | 30.0% |
| GCAAACTACAAGAAGATAAA+GGG | - | chr7_4:48024485-48024504 | None:intergenic | 30.0% | |
| TGCAAACTACAAGAAGATAA+AGG | - | chr7_4:48024486-48024505 | None:intergenic | 30.0% | |
| !!! | TATTTTTTTTTTGCCTTGGG+GGG | + | chr7_4:48024588-48024607 | Msa1158620:intron | 30.0% |
| CTGTCAAAGATTCAATACTT+AGG | + | chr7_4:48024617-48024636 | Msa1158620:intron | 30.0% | |
| GTCAAAGATTCAATACTTAG+GGG | + | chr7_4:48024619-48024638 | Msa1158620:intron | 30.0% | |
| TCAAAGATTCAATACTTAGG+GGG | + | chr7_4:48024620-48024639 | Msa1158620:intron | 30.0% | |
| GAGTCAAAAGTTTGATCATT+TGG | - | chr7_4:48024760-48024779 | None:intergenic | 30.0% | |
| ! | AGTTTGACCACATTTTCATT+AGG | - | chr7_4:48024811-48024830 | None:intergenic | 30.0% |
| AAATTAATACTGCCCAATGA+GGG | + | chr7_4:48025254-48025273 | Msa1158620:intron | 30.0% | |
| !!! | ACCTCTTTAAGTTTTAGGTT+AGG | + | chr7_4:48025465-48025484 | Msa1158620:intron | 30.0% |
| TCCTAACCTAAAACTTAAAG+AGG | - | chr7_4:48025469-48025488 | None:intergenic | 30.0% | |
| AGGAAATGTAAGAAAGCTTA+TGG | + | chr7_4:48025485-48025504 | Msa1158620:intron | 30.0% | |
| TTTCTTATAAATGTGTCCGA+GGG | - | chr7_4:48025518-48025537 | None:intergenic | 30.0% | |
| ! | TTTTCTTATAAATGTGTCCG+AGG | - | chr7_4:48025519-48025538 | None:intergenic | 30.0% |
| !!! | GATTATTTTATTTTTCCGGG+TGG | - | chr7_4:48025605-48025624 | None:intergenic | 30.0% |
| !!! | TTTATGTCGGTTTTAGGTTT+CGG | + | chr7_4:48025662-48025681 | Msa1158620:intron | 30.0% |
| !!! | TACAATTTTATGTCGGCTTT+AGG | + | chr7_4:48025770-48025789 | Msa1158620:intron | 30.0% |
| AATTATTCAATGTACAGTGG+CGG | - | chr7_4:48025941-48025960 | None:intergenic | 30.0% | |
| TTTCACATCAAAATTATGGG+TGG | + | chr7_4:48026123-48026142 | Msa1158620:intron | 30.0% | |
| TTCACATCAAAATTATGGGT+GGG | + | chr7_4:48026124-48026143 | Msa1158620:intron | 30.0% | |
| GATAAATATATACGGAGTCA+CGG | + | chr7_4:48026152-48026171 | Msa1158620:intron | 30.0% | |
| ATTGAACCCATCAAATTAGT+CGG | - | chr7_4:48026227-48026246 | None:intergenic | 30.0% | |
| TAGTCCATCAAAATTGGTAT+TGG | + | chr7_4:48026303-48026322 | Msa1158620:intron | 30.0% | |
| ! | TTGTCCAATACCAATTTTGA+TGG | - | chr7_4:48026310-48026329 | None:intergenic | 30.0% |
| !! | ATTAATTTTCGTTGGTCTAG+TGG | - | chr7_4:48026380-48026399 | None:intergenic | 30.0% |
| TATAATCTACATAGGATAGG+AGG | + | chr7_4:48026484-48026503 | Msa1158620:intron | 30.0% | |
| TTACAAATATACATGTCCCA+CGG | - | chr7_4:48026623-48026642 | None:intergenic | 30.0% | |
| CTGTATCTAAATGGAAATTG+TGG | - | chr7_4:48026850-48026869 | None:intergenic | 30.0% | |
| ! | GTTTGGAATCTGTATCTAAA+TGG | - | chr7_4:48026859-48026878 | None:intergenic | 30.0% |
| TCAAGAAGTTTCAAATGGTT+TGG | - | chr7_4:48026876-48026895 | None:intergenic | 30.0% | |
| CAACATCAAGAAGTTTCAAA+TGG | - | chr7_4:48026881-48026900 | None:intergenic | 30.0% | |
| AACTTCTTGATGTTGTACAA+AGG | + | chr7_4:48026886-48026905 | Msa1158620:intron | 30.0% | |
| ACACGTTATGTGATAGTATT+GGG | - | chr7_4:48026957-48026976 | None:intergenic | 30.0% | |
| ! | AATAAAAAGGACAAGGTGTT+TGG | + | chr7_4:48026986-48027005 | Msa1158620:intron | 30.0% |
| TACACATTTCATTCAAAAGC+TGG | + | chr7_4:48027010-48027029 | Msa1158620:intron | 30.0% | |
| TTTCATTCAAAAGCTGGTTA+AGG | + | chr7_4:48027016-48027035 | Msa1158620:intron | 30.0% | |
| AATATTGTGTTAGGTTCTTC+TGG | + | chr7_4:48027505-48027524 | Msa1158620:intron | 30.0% | |
| TTTACCTTGATTTCCCTAAA+TGG | - | chr7_4:48027635-48027654 | None:intergenic | 30.0% | |
| ! | TATTGTGGTTTTCTGAATGA+CGG | + | chr7_4:48027726-48027745 | Msa1158620:intron | 30.0% |
| ! | TACATTCAACCTGAATTTTC+AGG | - | chr7_4:48027755-48027774 | None:intergenic | 30.0% |
| GAATATAAATAACCTCAGGA+TGG | - | chr7_4:48027872-48027891 | None:intergenic | 30.0% | |
| TGACAAAAACTAAATCTCAG+TGG | - | chr7_4:48027953-48027972 | None:intergenic | 30.0% | |
| AGTACTCAATGATTCGTATA+TGG | + | chr7_4:48028019-48028038 | Msa1158620:intron | 30.0% | |
| AGAATTTACTAACTAACCTG+TGG | - | chr7_4:48028385-48028404 | None:intergenic | 30.0% | |
| CTGTTCGATGAAATTAGAAA+TGG | - | chr7_4:48028618-48028637 | None:intergenic | 30.0% | |
| TTTGTTTCCTTTGTCAAACT+AGG | + | chr7_4:48028677-48028696 | Msa1158620:intron | 30.0% | |
| TGACGAAGTTCTTAAATGAA+AGG | - | chr7_4:48028831-48028850 | None:intergenic | 30.0% | |
| ! | AACTTCGTCAATGAAGTTTT+TGG | + | chr7_4:48028841-48028860 | Msa1158620:intron | 30.0% |
| GCACAATTAATTGATGAGAA+AGG | + | chr7_4:48028928-48028947 | Msa1158620:CDS | 30.0% | |
| CAATTAATTGATGAGAAAGG+GGG | + | chr7_4:48028931-48028950 | Msa1158620:CDS | 30.0% | |
| ! | TATTCTTTTGGTATGGTTGA+AGG | + | chr7_4:48029258-48029277 | Msa1158620:intron | 30.0% |
| ! | ATTCTTTTGGTATGGTTGAA+GGG | + | chr7_4:48029259-48029278 | Msa1158620:intron | 30.0% |
| AGTAAGGAAGGTAATTAACA+TGG | - | chr7_4:48029424-48029443 | None:intergenic | 30.0% | |
| !! | TTCTTTAGAATCTGCAAGTA+AGG | - | chr7_4:48029440-48029459 | None:intergenic | 30.0% |
| CTGAATTTGCATAAATGTCT+GGG | - | chr7_4:48029481-48029500 | None:intergenic | 30.0% | |
| AAGCCTTTAATATGAAGTGT+CGG | - | chr7_4:48029619-48029638 | None:intergenic | 30.0% | |
| CATATTAAAGGCTTATTGAG+AGG | + | chr7_4:48029625-48029644 | Msa1158620:intron | 30.0% | |
| GTTAATCCAAGAATAGTACA+TGG | - | chr7_4:48030152-48030171 | None:intergenic | 30.0% | |
| !!! | AGCATTTTAAGGCTTATAGA+TGG | - | chr7_4:48030231-48030250 | None:intergenic | 30.0% |
| AATGCTTAATACTACGAACT+TGG | + | chr7_4:48030245-48030264 | Msa1158620:three_prime_UTR | 30.0% | |
| ! | ATATGCTTTCTAGTGTCTAG+TGG | + | chr7_4:48023836-48023855 | Msa1158620:intron | 35.0% |
| ! | TATGCTTTCTAGTGTCTAGT+GGG | + | chr7_4:48023837-48023856 | Msa1158620:intron | 35.0% |
| GTCAGAAAGAATCAAAAGTG+AGG | - | chr7_4:48023914-48023933 | None:intergenic | 35.0% | |
| AGCAATGTGAAACAAGTGAA+TGG | - | chr7_4:48024108-48024127 | None:intergenic | 35.0% | |
| ! | TCACATTGCTTTGTTAAGCT+TGG | + | chr7_4:48024118-48024137 | Msa1158620:five_prime_UTR | 35.0% |
| !!! | GCATTTCCCTCTACATTTTT+TGG | + | chr7_4:48024145-48024164 | Msa1158620:five_prime_UTR | 35.0% |
| TGATTTCAGTAGTCTCTTGA+TGG | + | chr7_4:48024435-48024454 | Msa1158620:intron | 35.0% | |
| GATTTCAGTAGTCTCTTGAT+GGG | + | chr7_4:48024436-48024455 | Msa1158620:intron | 35.0% | |
| ATTTCAGTAGTCTCTTGATG+GGG | + | chr7_4:48024437-48024456 | Msa1158620:intron | 35.0% | |
| ! | CACACCATTAATTGCAGTTT+TGG | + | chr7_4:48024515-48024534 | Msa1158620:intron | 35.0% |
| !! | ACTTTTGACTCTTTCAGAGT+CGG | + | chr7_4:48024769-48024788 | Msa1158620:intron | 35.0% |
| ! | GAGTCGGTTAGTTAATAGAT+TGG | + | chr7_4:48024785-48024804 | Msa1158620:intron | 35.0% |
| !! | AGATTGGCCTAATGAAAATG+TGG | + | chr7_4:48024801-48024820 | Msa1158620:intron | 35.0% |
| GAACTGATTGGATATGTGTA+AGG | + | chr7_4:48024902-48024921 | Msa1158620:intron | 35.0% | |
| GATTGGATATGTGTAAGGAA+TGG | + | chr7_4:48024907-48024926 | Msa1158620:intron | 35.0% | |
| AAGTAGTGAATATGCTATGC+TGG | + | chr7_4:48025023-48025042 | Msa1158620:intron | 35.0% | |
| AAGCATAACAACATGTCTAC+TGG | + | chr7_4:48025166-48025185 | Msa1158620:intron | 35.0% | |
| AGCATAACAACATGTCTACT+GGG | + | chr7_4:48025167-48025186 | Msa1158620:intron | 35.0% | |
| GGGGAGGTTCATATATATTT+AGG | + | chr7_4:48025188-48025207 | Msa1158620:intron | 35.0% | |
| CAAATTAATACTGCCCAATG+AGG | + | chr7_4:48025253-48025272 | Msa1158620:intron | 35.0% | |
| ! | ATTGTGGAAGGCAAAGTATT+TGG | + | chr7_4:48025277-48025296 | Msa1158620:intron | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | + | chr7_4:48025385-48025404 | Msa1158620:intron | 35.0% |
| !! | ATGTTAACTTGTGCCCTTAA+GGG | + | chr7_4:48025386-48025405 | Msa1158620:intron | 35.0% |
| !! | ATGTTAACTTGTGCCCTTAA+GGG | - | chr7_4:48025386-48025405 | None:intergenic | 35.0% |
| !! | CATGCACCTCTTTAAGTTTT+AGG | + | chr7_4:48025460-48025479 | Msa1158620:intron | 35.0% |
| TTTAGATACATTGACAGTGG+CGG | + | chr7_4:48025549-48025568 | Msa1158620:intron | 35.0% | |
| !! | TTTATGTCGGCTTTAGGTTT+CGG | + | chr7_4:48025776-48025795 | Msa1158620:intron | 35.0% |
| TTCCGAAACTTAACCAACAA+AGG | + | chr7_4:48026055-48026074 | Msa1158620:intron | 35.0% | |
| ! | AGCCTTTGTTGGTTAAGTTT+CGG | - | chr7_4:48026060-48026079 | None:intergenic | 35.0% |
| AATTAGTCGGTCTTTGAATG+TGG | - | chr7_4:48026214-48026233 | None:intergenic | 35.0% | |
| TCAAAGACCGACTAATTTGA+TGG | + | chr7_4:48026217-48026236 | Msa1158620:intron | 35.0% | |
| CAAAGACCGACTAATTTGAT+GGG | + | chr7_4:48026218-48026237 | Msa1158620:intron | 35.0% | |
| TTAAATAGAATCTCCGCATG+TGG | - | chr7_4:48026258-48026277 | None:intergenic | 35.0% | |
| TTTACCTCATGCGTAAGAAT+AGG | + | chr7_4:48026714-48026733 | Msa1158620:intron | 35.0% | |
| ! | TATGTGAAGAGGTATGATTC+AGG | - | chr7_4:48026797-48026816 | None:intergenic | 35.0% |
| GGCTACAAAATTATGTGAAG+AGG | - | chr7_4:48026808-48026827 | None:intergenic | 35.0% | |
| !! | GGGAATCATTTGGTTCTAAA+TGG | - | chr7_4:48026829-48026848 | None:intergenic | 35.0% |
| TGGAAATTGTGGGAATCATT+TGG | - | chr7_4:48026839-48026858 | None:intergenic | 35.0% | |
| GACACGTTATGTGATAGTAT+TGG | - | chr7_4:48026958-48026977 | None:intergenic | 35.0% | |
| ! | ATTGGTGACAATGATACACA+TGG | + | chr7_4:48027246-48027265 | Msa1158620:intron | 35.0% |
| ! | ACCTTTTATCAAAAGAGACG+CGG | - | chr7_4:48027483-48027502 | None:intergenic | 35.0% |
| !!! | GGAATTTTAAGTTGGCTTCT+AGG | + | chr7_4:48027567-48027586 | Msa1158620:CDS | 35.0% |
| ! | GAGTAAACTTTTCTCAAGCT+TGG | - | chr7_4:48027609-48027628 | None:intergenic | 35.0% |
| CATTCCATTTAGGGAAATCA+AGG | + | chr7_4:48027628-48027647 | Msa1158620:CDS | 35.0% | |
| TGTACCATTCCAAAAGATGA+CGG | + | chr7_4:48027771-48027790 | Msa1158620:CDS | 35.0% | |
| ! | GTTCAACATGATAATGCTAG+AGG | + | chr7_4:48027822-48027841 | Msa1158620:CDS | 35.0% |
| GATTCGTATATGGTTGTTTG+TGG | + | chr7_4:48028029-48028048 | Msa1158620:intron | 35.0% | |
| GCTGTAGCAAATATACCATA+TGG | + | chr7_4:48028217-48028236 | Msa1158620:CDS | 35.0% | |
| GTAGCAAATATACCATATGG+TGG | + | chr7_4:48028220-48028239 | Msa1158620:CDS | 35.0% | |
| TGATCTAATTGGAACTCACA+TGG | + | chr7_4:48028330-48028349 | Msa1158620:CDS | 35.0% | |
| TTTGATATGAATGCAGACCA+TGG | + | chr7_4:48028510-48028529 | Msa1158620:intron | 35.0% | |
| AGGCTTTGCTTAATGAGTAT+GGG | + | chr7_4:48028760-48028779 | Msa1158620:CDS | 35.0% | |
| ACCATACTGTGTATTTGTTC+AGG | + | chr7_4:48028879-48028898 | Msa1158620:intron | 35.0% | |
| CCATACTGTGTATTTGTTCA+GGG | + | chr7_4:48028880-48028899 | Msa1158620:intron | 35.0% | |
| ! | TGTGTATTTGTTCAGGGTTT+TGG | + | chr7_4:48028886-48028905 | Msa1158620:intron | 35.0% |
| !!! | TTCAGGGTTTTGGAAATGTA+GGG | + | chr7_4:48028896-48028915 | Msa1158620:intron | 35.0% |
| !! | TTTTGGAAATGTAGGGTCTT+GGG | + | chr7_4:48028903-48028922 | Msa1158620:CDS | 35.0% |
| ! | TTTTACTCCTTTCTGCTCTT+TGG | - | chr7_4:48029037-48029056 | None:intergenic | 35.0% |
| AAAGAGCAGAAAGGAGTAAA+AGG | + | chr7_4:48029036-48029055 | Msa1158620:CDS | 35.0% | |
| AAAGGAGTAAAAGGATTCCA+TGG | + | chr7_4:48029045-48029064 | Msa1158620:CDS | 35.0% | |
| AATCAAATGAATCACCACCA+TGG | - | chr7_4:48029065-48029084 | None:intergenic | 35.0% | |
| TGTCATCTTTCCAAGCTAAA+GGG | - | chr7_4:48029389-48029408 | None:intergenic | 35.0% | |
| TTAGAATCTGCAAGTAAGGA+AGG | - | chr7_4:48029436-48029455 | None:intergenic | 35.0% | |
| AATTTGCATAAATGTCTGGG+AGG | - | chr7_4:48029478-48029497 | None:intergenic | 35.0% | |
| CCTGAATTTGCATAAATGTC+TGG | - | chr7_4:48029482-48029501 | None:intergenic | 35.0% | |
| CCAGACATTTATGCAAATTC+AGG | + | chr7_4:48029479-48029498 | Msa1158620:CDS | 35.0% | |
| GACATTTATGCAAATTCAGG+AGG | + | chr7_4:48029482-48029501 | Msa1158620:CDS | 35.0% | |
| ! | TTACAGTTAGCTACTTTGAG+TGG | + | chr7_4:48029507-48029526 | Msa1158620:CDS | 35.0% |
| ! | TACAGTTAGCTACTTTGAGT+GGG | + | chr7_4:48029508-48029527 | Msa1158620:CDS | 35.0% |
| TGATATACACAGAACATCCA+AGG | + | chr7_4:48029806-48029825 | Msa1158620:intron | 35.0% | |
| GATATACACAGAACATCCAA+GGG | + | chr7_4:48029807-48029826 | Msa1158620:intron | 35.0% | |
| TCATGAATGTGATCTTCGAA+TGG | + | chr7_4:48029916-48029935 | Msa1158620:CDS | 35.0% | |
| CATGAATGTGATCTTCGAAT+GGG | + | chr7_4:48029917-48029936 | Msa1158620:CDS | 35.0% | |
| ! | TCTTTTATTCCAAGCAGCAA+CGG | - | chr7_4:48030014-48030033 | None:intergenic | 35.0% |
| GTACTCAGATCAACATGCTT+AGG | - | chr7_4:48023936-48023955 | None:intergenic | 40.0% | |
| CAATTAATGGTGTGAGATGG+AGG | - | chr7_4:48024509-48024528 | None:intergenic | 40.0% | |
| CTGCAATTAATGGTGTGAGA+TGG | - | chr7_4:48024512-48024531 | None:intergenic | 40.0% | |
| TGACGTGTACTTGAACTGAT+TGG | + | chr7_4:48024890-48024909 | Msa1158620:intron | 40.0% | |
| GCATAACAACATGTCTACTG+GGG | + | chr7_4:48025168-48025187 | Msa1158620:intron | 40.0% | |
| CATAACAACATGTCTACTGG+GGG | + | chr7_4:48025169-48025188 | Msa1158620:intron | 40.0% | |
| ACATTGCCACATGTTGTACT+TGG | + | chr7_4:48025324-48025343 | Msa1158620:intron | 40.0% | |
| !! | CATGTTAACTTGTGCCCTTA+AGG | - | chr7_4:48025403-48025422 | None:intergenic | 40.0% |
| ! | ACTTAAAGAGGTGCATGTGA+CGG | - | chr7_4:48025457-48025476 | None:intergenic | 40.0% |
| TGATCCAAATTCCTGCAAAG+TGG | + | chr7_4:48025686-48025705 | Msa1158620:intron | 40.0% | |
| TACACCACTTTGCAGGAATT+TGG | - | chr7_4:48025693-48025712 | None:intergenic | 40.0% | |
| ATTCCTGCAAAGTGGTGTAA+TGG | + | chr7_4:48025694-48025713 | Msa1158620:intron | 40.0% | |
| TTCCTGCAAAGTGGTGTAAT+GGG | + | chr7_4:48025695-48025714 | Msa1158620:intron | 40.0% | |
| CCAGAAAAAAAAGTTGGGGT+GGG | - | chr7_4:48025916-48025935 | None:intergenic | 40.0% | |
| GGAGCCAGAAAAAAAAGTTG+GGG | - | chr7_4:48025920-48025939 | None:intergenic | 40.0% | |
| CGGAGCCAGAAAAAAAAGTT+GGG | - | chr7_4:48025921-48025940 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr7_4:48026026-48026045 | Msa1158620:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | + | chr7_4:48026027-48026046 | Msa1158620:intron | 40.0% | |
| AGAGTTACTCAATCCTAACG+TGG | + | chr7_4:48026571-48026590 | Msa1158620:intron | 40.0% | |
| TCATGATTTCATGCCACGTT+AGG | - | chr7_4:48026587-48026606 | None:intergenic | 40.0% | |
| TAGTCCTATTCTTACGCATG+AGG | - | chr7_4:48026721-48026740 | None:intergenic | 40.0% | |
| TGACAATGATACACATGGCA+TGG | + | chr7_4:48027251-48027270 | Msa1158620:intron | 40.0% | |
| ! | TCCGCGTCTCTTTTGATAAA+AGG | + | chr7_4:48027479-48027498 | Msa1158620:intron | 40.0% |
| TTGTGTTAGGTTCTTCTGGT+TGG | + | chr7_4:48027509-48027528 | Msa1158620:intron | 40.0% | |
| ! | TTAGGTTCTTCTGGTTGGTT+AGG | + | chr7_4:48027514-48027533 | Msa1158620:intron | 40.0% |
| ! | TAGGTTCTTCTGGTTGGTTA+GGG | + | chr7_4:48027515-48027534 | Msa1158620:intron | 40.0% |
| !! | TAAGTTGGCTTCTAGGCTTT+TGG | + | chr7_4:48027574-48027593 | Msa1158620:CDS | 40.0% |
| !! | AAGTTGGCTTCTAGGCTTTT+GGG | + | chr7_4:48027575-48027594 | Msa1158620:CDS | 40.0% |
| GGCACGTTGCAATCTTATAT+TGG | + | chr7_4:48027792-48027811 | Msa1158620:CDS | 40.0% | |
| TATCTGATCCCTCCTTTCAT+GGG | - | chr7_4:48027849-48027868 | None:intergenic | 40.0% | |
| ! | GCTAAAGCATTCACTTCATC+TGG | - | chr7_4:48028175-48028194 | None:intergenic | 40.0% |
| CTTTAGCGCAACTAATGACA+TGG | + | chr7_4:48028188-48028207 | Msa1158620:CDS | 40.0% | |
| GATGTTGCTGTCGTATACTT+TGG | + | chr7_4:48028413-48028432 | Msa1158620:intron | 40.0% | |
| TTCATCTAGTATCCATGCCA+TGG | - | chr7_4:48028530-48028549 | None:intergenic | 40.0% | |
| CCAAGATCCTAGTTTGACAA+AGG | - | chr7_4:48028687-48028706 | None:intergenic | 40.0% | |
| CCTTTGTCAAACTAGGATCT+TGG | + | chr7_4:48028684-48028703 | Msa1158620:intron | 40.0% | |
| TTGTCAAACTAGGATCTTGG+TGG | + | chr7_4:48028687-48028706 | Msa1158620:intron | 40.0% | |
| GAGGCTTTGCTTAATGAGTA+TGG | + | chr7_4:48028759-48028778 | Msa1158620:CDS | 40.0% | |
| GAGTATGGGAAGAGTTTATC+TGG | + | chr7_4:48028774-48028793 | Msa1158620:CDS | 40.0% | |
| GGAAGAGTTTATCTGGACAA+CGG | + | chr7_4:48028781-48028800 | Msa1158620:CDS | 40.0% | |
| CCCTGAACAAATACACAGTA+TGG | - | chr7_4:48028883-48028902 | None:intergenic | 40.0% | |
| !!! | GTTCAGGGTTTTGGAAATGT+AGG | + | chr7_4:48028895-48028914 | Msa1158620:intron | 40.0% |
| !!! | GTTTTGGAAATGTAGGGTCT+TGG | + | chr7_4:48028902-48028921 | Msa1158620:CDS | 40.0% |
| ! | GTTGCTGTTAGTGACATAAC+TGG | + | chr7_4:48028961-48028980 | Msa1158620:CDS | 40.0% |
| GGAGCTATAAAGAACAGCAA+AGG | + | chr7_4:48028982-48029001 | Msa1158620:CDS | 40.0% | |
| AAGCATACCAAAGAGCAGAA+AGG | + | chr7_4:48029027-48029046 | Msa1158620:CDS | 40.0% | |
| ! | TTTTAATCCCAGCAGCTCTT+GGG | + | chr7_4:48029115-48029134 | Msa1158620:CDS | 40.0% |
| TCTTTCCAAGCTAAAGGGAA+GGG | - | chr7_4:48029384-48029403 | None:intergenic | 40.0% | |
| ATCTTTCCAAGCTAAAGGGA+AGG | - | chr7_4:48029385-48029404 | None:intergenic | 40.0% | |
| CTGTCATCTTTCCAAGCTAA+AGG | - | chr7_4:48029390-48029409 | None:intergenic | 40.0% | |
| ! | GCACCGACACTTCATATTAA+AGG | + | chr7_4:48029613-48029632 | Msa1158620:intron | 40.0% |
| AGAACATCCAAGGGTTTATG+TGG | + | chr7_4:48029816-48029835 | Msa1158620:intron | 40.0% | |
| GAACATCCAAGGGTTTATGT+GGG | + | chr7_4:48029817-48029836 | Msa1158620:intron | 40.0% | |
| AGGGTTCCATGTACTATTCT+TGG | + | chr7_4:48030143-48030162 | Msa1158620:three_prime_UTR | 40.0% | |
| AAAGCTTGTGACTCGTTTGC+AGG | + | chr7_4:48024078-48024097 | Msa1158620:intron | 45.0% | |
| GGGGCCAAAACTGCAATTAA+TGG | - | chr7_4:48024522-48024541 | None:intergenic | 45.0% | |
| !! | TAATTGCAGTTTTGGCCCCA+AGG | + | chr7_4:48024523-48024542 | Msa1158620:intron | 45.0% |
| AGTTCAAGTACACGTCAGTG+TGG | - | chr7_4:48024887-48024906 | None:intergenic | 45.0% | |
| CATCTGCCAAGTACAACATG+TGG | - | chr7_4:48025333-48025352 | None:intergenic | 45.0% | |
| AGCTTATGGTTGTACTCCCT+CGG | + | chr7_4:48025499-48025518 | Msa1158620:intron | 45.0% | |
| TGATCCAAATTCCCGCAAAG+TGG | + | chr7_4:48025800-48025819 | Msa1158620:intron | 45.0% | |
| TACACCACTTTGCGGGAATT+TGG | - | chr7_4:48025807-48025826 | None:intergenic | 45.0% | |
| !!! | CCCACCCCAACTTTTTTTTC+TGG | + | chr7_4:48025913-48025932 | Msa1158620:intron | 45.0% |
| GCCAGAAAAAAAAGTTGGGG+TGG | - | chr7_4:48025917-48025936 | None:intergenic | 45.0% | |
| GCGGAGCCAGAAAAAAAAGT+TGG | - | chr7_4:48025922-48025941 | None:intergenic | 45.0% | |
| ATAGAATCTCCGCATGTGGA+CGG | - | chr7_4:48026254-48026273 | None:intergenic | 45.0% | |
| TTCAGGTGAGGTAGGAACTA+TGG | - | chr7_4:48026780-48026799 | None:intergenic | 45.0% | |
| AGGTATGATTCAGGTGAGGT+AGG | - | chr7_4:48026788-48026807 | None:intergenic | 45.0% | |
| ! | GAAGAGGTATGATTCAGGTG+AGG | - | chr7_4:48026792-48026811 | None:intergenic | 45.0% |
| ATGCACTAGCAGCTACAAAC+AGG | + | chr7_4:48027546-48027565 | Msa1158620:CDS | 45.0% | |
| TGACGGTGTCCTGAAAATTC+AGG | + | chr7_4:48027743-48027762 | Msa1158620:intron | 45.0% | |
| ATCTGATCCCTCCTTTCATG+GGG | - | chr7_4:48027848-48027867 | None:intergenic | 45.0% | |
| GTATCTGATCCCTCCTTTCA+TGG | - | chr7_4:48027850-48027869 | None:intergenic | 45.0% | |
| ! | ATACCATATGGTGGTGCCAA+AGG | + | chr7_4:48028229-48028248 | Msa1158620:CDS | 45.0% |
| GATGTTCCTGCACCTGATAT+GGG | + | chr7_4:48028352-48028371 | Msa1158620:CDS | 45.0% | |
| TATGAATGCAGACCATGGCA+TGG | + | chr7_4:48028515-48028534 | Msa1158620:intron | 45.0% | |
| ! | TAGGATCTTGGTGGATCTCT+AGG | + | chr7_4:48028696-48028715 | Msa1158620:intron | 45.0% |
| TGGTATGCTTGAGTAGGCTA+GGG | - | chr7_4:48029017-48029036 | None:intergenic | 45.0% | |
| TTGGTATGCTTGAGTAGGCT+AGG | - | chr7_4:48029018-48029037 | None:intergenic | 45.0% | |
| GCTCTTTGGTATGCTTGAGT+AGG | - | chr7_4:48029023-48029042 | None:intergenic | 45.0% | |
| GGAGTAAAAGGATTCCATGG+TGG | + | chr7_4:48029048-48029067 | Msa1158620:CDS | 45.0% | |
| !! | GTTTTAATCCCAGCAGCTCT+TGG | + | chr7_4:48029114-48029133 | Msa1158620:CDS | 45.0% |
| TTTAATCCCAGCAGCTCTTG+GGG | + | chr7_4:48029116-48029135 | Msa1158620:CDS | 45.0% | |
| AACCAACCTCATCAGCATCA+GGG | - | chr7_4:48029343-48029362 | None:intergenic | 45.0% | |
| AAACCAACCTCATCAGCATC+AGG | - | chr7_4:48029344-48029363 | None:intergenic | 45.0% | |
| ! | TAGCTACTTTGAGTGGGTTC+AGG | + | chr7_4:48029514-48029533 | Msa1158620:CDS | 45.0% |
| ACGGTTAACTCCCAAACTGA+AGG | - | chr7_4:48029945-48029964 | None:intergenic | 45.0% | |
| !!! | ATTGAATTATTTAAATTTTT+CGG | - | chr7_4:48025725-48025744 | None:intergenic | 5.0% |
| !! | AATTTAAATAATTCAATTAT+AGG | + | chr7_4:48025728-48025747 | Msa1158620:intron | 5.0% |
| !!! | ATTGAATTATTTAAATTTTT+CGG | - | chr7_4:48025725-48025744 | None:intergenic | 5.0% |
| !! | AATTTAAATAATTCAATTAT+AGG | + | chr7_4:48025728-48025747 | Msa1158620:intron | 5.0% |
| !! | AAAAAATAAATGAATATAAA+CGG | - | chr7_4:48026179-48026198 | None:intergenic | 5.0% |
| !!! | TTCATTTATTTTTTAAAATT+TGG | + | chr7_4:48026185-48026204 | Msa1158620:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTGTAT+AGG | - | chr7_4:48027987-48028006 | None:intergenic | 5.0% |
| CATGCGTTGCTCTTTGCATC+AGG | + | chr7_4:48024281-48024300 | Msa1158620:intron | 50.0% | |
| AACAACATGTCTACTGGGGG+AGG | + | chr7_4:48025172-48025191 | Msa1158620:intron | 50.0% | |
| TACTGCCCAATGAGGGATTG+TGG | + | chr7_4:48025261-48025280 | Msa1158620:intron | 50.0% | |
| GCCTTCCACAATCCCTCATT+GGG | - | chr7_4:48025269-48025288 | None:intergenic | 50.0% | |
| TGCCTTCCACAATCCCTCAT+TGG | - | chr7_4:48025270-48025289 | None:intergenic | 50.0% | |
| !! | TTATTTTTCCGGGTGGACCG+TGG | - | chr7_4:48025598-48025617 | None:intergenic | 50.0% |
| GACCCATTACACCACTTTGC+AGG | - | chr7_4:48025700-48025719 | None:intergenic | 50.0% | |
| ATTCCCGCAAAGTGGTGTAG+TGG | + | chr7_4:48025808-48025827 | Msa1158620:intron | 50.0% | |
| AGTTTCGGAACTACTCCCTC+CGG | - | chr7_4:48026045-48026064 | None:intergenic | 50.0% | |
| TCAATTCGACCGTCCACATG+CGG | + | chr7_4:48026242-48026261 | Msa1158620:intron | 50.0% | |
| ATGATCCGCATAACAAGCCG+TGG | + | chr7_4:48026603-48026622 | Msa1158620:intron | 50.0% | |
| TGATCCGCATAACAAGCCGT+GGG | + | chr7_4:48026604-48026623 | Msa1158620:intron | 50.0% | |
| !! | ATGTCCCACGGCTTGTTATG+CGG | - | chr7_4:48026611-48026630 | None:intergenic | 50.0% |
| CACATGGCATGGCACATTGA+TGG | + | chr7_4:48027262-48027281 | Msa1158620:intron | 50.0% | |
| !!! | GGCTTCTAGGCTTTTGGGAT+TGG | + | chr7_4:48027580-48027599 | Msa1158620:CDS | 50.0% |
| !! | CGTGCCGTCATCTTTTGGAA+TGG | - | chr7_4:48027778-48027797 | None:intergenic | 50.0% |
| ! | TGCAACGTGCCGTCATCTTT+TGG | - | chr7_4:48027783-48027802 | None:intergenic | 50.0% |
| AATGCTAGAGGCCCCATGAA+AGG | + | chr7_4:48027834-48027853 | Msa1158620:CDS | 50.0% | |
| AGGGATCAGATACCATCCTG+AGG | + | chr7_4:48027857-48027876 | Msa1158620:CDS | 50.0% | |
| ! | CATATGGTGGTGCCAAAGGA+GGG | + | chr7_4:48028233-48028252 | Msa1158620:CDS | 50.0% |
| GTTACACCCTATCCCTCCTT+TGG | - | chr7_4:48028248-48028267 | None:intergenic | 50.0% | |
| GGATGTTCCTGCACCTGATA+TGG | + | chr7_4:48028351-48028370 | Msa1158620:CDS | 50.0% | |
| TGTGGTCCTGTTCCCATATC+AGG | - | chr7_4:48028367-48028386 | None:intergenic | 50.0% | |
| TGATATGGGAACAGGACCAC+AGG | + | chr7_4:48028366-48028385 | Msa1158620:CDS | 50.0% | |
| AGGCGAGTAGCCGTGAAATT+TGG | - | chr7_4:48028557-48028576 | None:intergenic | 50.0% | |
| ! | GGTTTTCCAGTCACTACTGC+AGG | - | chr7_4:48028577-48028596 | None:intergenic | 50.0% |
| AGGAGTCATGTTTGCAGCAG+AGG | + | chr7_4:48028740-48028759 | Msa1158620:CDS | 50.0% | |
| TGGACAACGGTTCGTCATTC+AGG | + | chr7_4:48028794-48028813 | Msa1158620:CDS | 50.0% | |
| TTAATCCCAGCAGCTCTTGG+GGG | + | chr7_4:48029117-48029136 | Msa1158620:CDS | 50.0% | |
| !! | CTCTTGGGGGTGTCATCAAT+AGG | + | chr7_4:48029130-48029149 | Msa1158620:CDS | 50.0% |
| ATCAGGGTCAGTTGGGTGAT+TGG | - | chr7_4:48029327-48029346 | None:intergenic | 50.0% | |
| CATCAGCATCAGGGTCAGTT+GGG | - | chr7_4:48029334-48029353 | None:intergenic | 50.0% | |
| TCATCAGCATCAGGGTCAGT+TGG | - | chr7_4:48029335-48029354 | None:intergenic | 50.0% | |
| AACTGACCCTGATGCTGATG+AGG | + | chr7_4:48029334-48029353 | Msa1158620:CDS | 50.0% | |
| CTCTTCCCTTCCCTTTAGCT+TGG | + | chr7_4:48029376-48029395 | Msa1158620:intron | 50.0% | |
| CCTCATCCCACATAAACCCT+TGG | - | chr7_4:48029826-48029845 | None:intergenic | 50.0% | |
| CCAAGGGTTTATGTGGGATG+AGG | + | chr7_4:48029823-48029842 | Msa1158620:CDS | 50.0% | |
| TCGAATGGGAGCCTTCAGTT+TGG | + | chr7_4:48029931-48029950 | Msa1158620:CDS | 50.0% | |
| CGAATGGGAGCCTTCAGTTT+GGG | + | chr7_4:48029932-48029951 | Msa1158620:CDS | 50.0% | |
| CAGTTTGGGAGTTAACCGTG+TGG | + | chr7_4:48029946-48029965 | Msa1158620:CDS | 50.0% | |
| GGCTACTGTCCTTAGAGGTT+GGG | + | chr7_4:48029973-48029992 | Msa1158620:CDS | 50.0% | |
| CTCAAGCTTCCCAACCTCTA+AGG | - | chr7_4:48029985-48030004 | None:intergenic | 50.0% | |
| ! | TTTTGGCCCCAAGGCTGATG+TGG | + | chr7_4:48024532-48024551 | Msa1158620:intron | 55.0% |
| ! | TAGGGTGCCACATCAGCCTT+GGG | - | chr7_4:48024542-48024561 | None:intergenic | 55.0% |
| ! | TTAGGGTGCCACATCAGCCT+TGG | - | chr7_4:48024543-48024562 | None:intergenic | 55.0% |
| CTGATGTGGCACCCTAAGTG+AGG | + | chr7_4:48024546-48024565 | Msa1158620:intron | 55.0% | |
| GACACGTGGCACCTCACTTA+GGG | - | chr7_4:48024560-48024579 | None:intergenic | 55.0% | |
| TGACACGTGGCACCTCACTT+AGG | - | chr7_4:48024561-48024580 | None:intergenic | 55.0% | |
| !! | TTGACAGTTTTGGCCCCCCA+AGG | - | chr7_4:48024604-48024623 | None:intergenic | 55.0% |
| GCCCAATGAGGGATTGTGGA+AGG | + | chr7_4:48025265-48025284 | Msa1158620:intron | 55.0% | |
| TGGGCCACTACACCACTTTG+CGG | - | chr7_4:48025815-48025834 | None:intergenic | 55.0% | |
| CTAGAGGCCCCATGAAAGGA+GGG | + | chr7_4:48027838-48027857 | Msa1158620:CDS | 55.0% | |
| CCTCCTTTGGCACCACCATA+TGG | - | chr7_4:48028235-48028254 | None:intergenic | 55.0% | |
| ! | CCATATGGTGGTGCCAAAGG+AGG | + | chr7_4:48028232-48028251 | Msa1158620:CDS | 55.0% |
| ! | GTGGTGCCAAAGGAGGGATA+GGG | + | chr7_4:48028239-48028258 | Msa1158620:CDS | 55.0% |
| CCTGTTCCCATATCAGGTGC+AGG | - | chr7_4:48028361-48028380 | None:intergenic | 55.0% | |
| CCTGCACCTGATATGGGAAC+AGG | + | chr7_4:48028358-48028377 | Msa1158620:CDS | 55.0% | |
| TACTCGCCTGCAGTAGTGAC+TGG | + | chr7_4:48028568-48028587 | Msa1158620:CDS | 55.0% | |
| CTAGGTAGAGACGCAGCTAC+AGG | + | chr7_4:48028714-48028733 | Msa1158620:CDS | 55.0% | |
| AGAGACGCAGCTACAGGAAG+AGG | + | chr7_4:48028720-48028739 | Msa1158620:CDS | 55.0% | |
| GACCCTGATGCTGATGAGGT+TGG | + | chr7_4:48029338-48029357 | Msa1158620:intron | 55.0% | |
| TGGGAGTTAACCGTGTGGCA+AGG | + | chr7_4:48029951-48029970 | Msa1158620:CDS | 55.0% | |
| GGGAGTTAACCGTGTGGCAA+GGG | + | chr7_4:48029952-48029971 | Msa1158620:CDS | 55.0% | |
| GCAAGGGCTACTGTCCTTAG+AGG | + | chr7_4:48029968-48029987 | Msa1158620:CDS | 55.0% | |
| GGGCTACTGTCCTTAGAGGT+TGG | + | chr7_4:48029972-48029991 | Msa1158620:CDS | 55.0% | |
| GAGATCTTGCCGTTGCTGCT+TGG | + | chr7_4:48030002-48030021 | Msa1158620:exon | 55.0% | |
| ! | AGGGTGCCACATCAGCCTTG+GGG | - | chr7_4:48024541-48024560 | None:intergenic | 60.0% |
| ! | ACAGTGGCGGAGCCCTTCAT+GGG | + | chr7_4:48025562-48025581 | Msa1158620:intron | 60.0% |
| GGGCCACTACACCACTTTGC+GGG | - | chr7_4:48025814-48025833 | None:intergenic | 60.0% | |
| GCTAGAGGCCCCATGAAAGG+AGG | + | chr7_4:48027837-48027856 | Msa1158620:CDS | 60.0% | |
| ! | GGTGGTGCCAAAGGAGGGAT+AGG | + | chr7_4:48028238-48028257 | Msa1158620:CDS | 60.0% |
| TGACACCCCCAAGAGCTGCT+GGG | - | chr7_4:48029125-48029144 | None:intergenic | 60.0% | |
| ATGACACCCCCAAGAGCTGC+TGG | - | chr7_4:48029126-48029145 | None:intergenic | 60.0% | |
| GGACAGTAGCCCTTGCCACA+CGG | - | chr7_4:48029964-48029983 | None:intergenic | 60.0% | |
| ! | GACAGTGGCGGAGCCCTTCA+TGG | + | chr7_4:48025561-48025580 | Msa1158620:intron | 65.0% |
| !! | AGCCCTTCATGGGCTGGGGT+GGG | + | chr7_4:48025572-48025591 | Msa1158620:intron | 65.0% |
| TGGCGGAGCCCTTCATGGGC+TGG | + | chr7_4:48025566-48025585 | Msa1158620:intron | 70.0% | |
| GGCGGAGCCCTTCATGGGCT+GGG | + | chr7_4:48025567-48025586 | Msa1158620:intron | 70.0% | |
| ! | GCGGAGCCCTTCATGGGCTG+GGG | + | chr7_4:48025568-48025587 | Msa1158620:intron | 70.0% |
| !! | GAGCCCTTCATGGGCTGGGG+TGG | + | chr7_4:48025571-48025590 | Msa1158620:intron | 70.0% |
| GGCCCACCCCAGCCCATGAA+GGG | - | chr7_4:48025577-48025596 | None:intergenic | 70.0% | |
| TGGCCCACCCCAGCCCATGA+AGG | - | chr7_4:48025578-48025597 | None:intergenic | 70.0% | |
| !! | TCATGGGCTGGGGTGGGCCA+CGG | + | chr7_4:48025578-48025597 | Msa1158620:intron | 70.0% |
| ! | GGGGTGGGCCACGGTCCACC+CGG | + | chr7_4:48025587-48025606 | Msa1158620:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48023714 | 48030278 | 48023714 | ID=Msa1158620;Name=Msa1158620 |
| chr7_4 | mRNA | 48023714 | 48030278 | 48023714 | ID=Msa1158620-mRNA-1;Parent=Msa1158620;Name=Msa1158620-mRNA-1;_AED=0.26;_eAED=0.26;_QI=194|1|1|1|0.8|0.72|11|275|411 |
| chr7_4 | exon | 48023714 | 48023816 | 48023714 | ID=Msa1158620-mRNA-1:exon:12904;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48024100 | 48024166 | 48024100 | ID=Msa1158620-mRNA-1:exon:12905;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48027518 | 48027649 | 48027518 | ID=Msa1158620-mRNA-1:exon:12906;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48027765 | 48027878 | 48027765 | ID=Msa1158620-mRNA-1:exon:12907;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48028166 | 48028387 | 48028166 | ID=Msa1158620-mRNA-1:exon:12908;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48028526 | 48028600 | 48028526 | ID=Msa1158620-mRNA-1:exon:12909;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48028699 | 48028815 | 48028699 | ID=Msa1158620-mRNA-1:exon:12910;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48028901 | 48029151 | 48028901 | ID=Msa1158620-mRNA-1:exon:12911;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48029280 | 48029355 | 48029280 | ID=Msa1158620-mRNA-1:exon:12912;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48029449 | 48029535 | 48029449 | ID=Msa1158620-mRNA-1:exon:12913;Parent=Msa1158620-mRNA-1 |
| chr7_4 | exon | 48029818 | 48030278 | 48029818 | ID=Msa1158620-mRNA-1:exon:12914;Parent=Msa1158620-mRNA-1 |
| chr7_4 | five_prime_UTR | 48023714 | 48023816 | 48023714 | ID=Msa1158620-mRNA-1:five_prime_utr;Parent=Msa1158620-mRNA-1 |
| chr7_4 | five_prime_UTR | 48024100 | 48024166 | 48024100 | ID=Msa1158620-mRNA-1:five_prime_utr;Parent=Msa1158620-mRNA-1 |
| chr7_4 | five_prime_UTR | 48027518 | 48027541 | 48027518 | ID=Msa1158620-mRNA-1:five_prime_utr;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48027542 | 48027649 | 48027542 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48027765 | 48027878 | 48027765 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48028166 | 48028387 | 48028166 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48028526 | 48028600 | 48028526 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48028699 | 48028815 | 48028699 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48028901 | 48029151 | 48028901 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48029280 | 48029355 | 48029280 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48029449 | 48029535 | 48029449 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | CDS | 48029818 | 48030003 | 48029818 | ID=Msa1158620-mRNA-1:cds;Parent=Msa1158620-mRNA-1 |
| chr7_4 | three_prime_UTR | 48030004 | 48030278 | 48030004 | ID=Msa1158620-mRNA-1:three_prime_utr;Parent=Msa1158620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
