AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0312890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0312890 MtrunA17_Chr2g0282301 94.637 317 16 1 1 316 1 317 0.0 620
Msa0312890 MtrunA17_Chr2g0282311 72.956 318 82 4 1 316 4 319 2.90e-166 465
Msa0312890 MtrunA17_Chr4g0047231 56.442 326 130 6 1 316 1 324 8.68e-127 365
Msa0312890 MtrunA17_Chr4g0047221 56.615 325 129 8 1 316 55 376 8.56e-123 357
Msa0312890 MtrunA17_Chr4g0040171 55.602 241 96 6 78 316 59 290 4.20e-88 265
Msa0312890 MtrunA17_Chr5g0396281 35.398 226 140 3 60 283 19 240 6.23e-46 155
Msa0312890 MtrunA17_Chr4g0075611 36.628 172 88 2 103 274 112 262 5.78e-34 126
Msa0312890 MtrunA17_Chr4g0075591 41.985 131 70 1 144 274 120 244 1.37e-33 124
Msa0312890 MtrunA17_Chr7g0251511 34.459 148 96 1 128 275 117 263 6.98e-33 124
Msa0312890 MtrunA17_Chr8g0339051 37.500 144 86 2 144 283 133 276 1.06e-32 122
Msa0312890 MtrunA17_Chr1g0166241 40.769 130 71 2 139 268 150 273 1.60e-32 123
Msa0312890 MtrunA17_Chr1g0188091 39.716 141 79 2 139 279 172 306 1.04e-30 119
Msa0312890 MtrunA17_Chr2g0289701 36.842 133 78 2 144 276 136 262 3.21e-29 114
Msa0312890 MtrunA17_Chr8g0384101 37.302 126 78 1 142 266 82 207 7.95e-29 111
Msa0312890 MtrunA17_Chr1g0184881 33.333 174 107 3 146 316 172 339 3.65e-28 111
Msa0312890 MtrunA17_Chr7g0260551 39.167 120 67 1 154 273 172 285 6.49e-28 111
Msa0312890 MtrunA17_Chr7g0234691 36.434 129 80 2 144 271 173 300 8.24e-26 105
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0312890 AT4G32480.1 53.165 237 105 4 67 302 43 274 1.62e-85 259
Msa0312890 AT2G20670.1 50.000 226 101 4 83 302 61 280 6.02e-77 237
Msa0312890 AT3G07350.1 37.086 151 95 0 132 282 125 275 1.30e-39 141
Msa0312890 AT4G14620.1 36.872 179 105 3 139 315 140 312 1.75e-35 131
Msa0312890 AT2G38820.2 38.298 141 75 3 137 271 148 282 1.78e-31 120
Msa0312890 AT3G25240.1 35.971 139 88 1 139 276 112 250 6.27e-31 118
Msa0312890 AT3G22970.2 39.259 135 76 1 139 273 54 182 9.15e-31 117
Msa0312890 AT3G22970.1 39.850 133 74 1 139 271 165 291 1.74e-29 115
Msa0312890 AT2G39650.2 30.657 137 94 1 137 272 42 178 9.15e-28 108
Msa0312890 AT2G39650.1 30.657 137 94 1 137 272 104 240 1.73e-27 108
Msa0312890 AT3G54550.1 35.036 137 79 2 143 275 145 275 4.24e-26 105
Msa0312890 AT1G62420.1 33.333 153 89 3 131 280 101 243 4.10e-25 102
Msa0312890 AT1G12030.1 33.333 132 81 2 144 274 112 237 4.04e-23 97.4
Msa0312890 AT1G77145.1 31.757 148 89 2 139 274 72 219 2.84e-21 91.7
Msa0312890 AT1G77160.2 32.117 137 81 2 142 266 25 161 3.78e-21 90.1
Msa0312890 AT1G77160.1 32.143 140 83 2 139 266 77 216 4.86e-21 90.9
Msa0312890 AT1G77145.2 35.514 107 65 1 172 274 56 162 3.11e-16 76.3

Find 75 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGTTGACTATTGATTTAT+TGG 0.144388 2_4:-8095597 Msa0312890:CDS
AACATGGATGCCTTTGATTT+TGG 0.176314 2_4:+8095614 None:intergenic
ATCCTTACTTCCCCTTTCTT+TGG 0.194440 2_4:+8095926 None:intergenic
TATTTCTTGAATAGCTTCTT+TGG 0.203225 2_4:+8096840 None:intergenic
CAGGAACCTAGTAGACTTTC+TGG 0.231900 2_4:+8097482 None:intergenic
ATTTATCTCTATACAAATAT+TGG 0.278613 2_4:+8095379 None:intergenic
TCATTCACTTGAAATGGATT+TGG 0.300841 2_4:-8097325 Msa0312890:CDS
TTGAGAAGAACCGAAGCTTT+TGG 0.320088 2_4:-8097266 Msa0312890:CDS
TGAACTTGTTCTATATATAT+TGG 0.329591 2_4:+8096888 None:intergenic
TCTACGAGGCTTCAGAAATC+TGG 0.333574 2_4:-8096733 Msa0312890:CDS
GTGCTATCTGCAAAACAAAA+TGG 0.339768 2_4:-8096702 Msa0312890:CDS
TCTATGTCATTCACTTGAAA+TGG 0.356046 2_4:-8097331 Msa0312890:CDS
ATTGCATTGCACAGCTGTTA+AGG 0.385921 2_4:-8095561 Msa0312890:CDS
GTTGAAGTGTTCCTTTCAAA+TGG 0.386132 2_4:+8095680 None:intergenic
ATAGGTACATGCAAGCTAAA+TGG 0.395692 2_4:-8095709 Msa0312890:CDS
AAGGTTGTGTGATTGTAAAA+AGG 0.406027 2_4:-8095542 Msa0312890:exon
AGCTGCCCGAGGTGTTTGTT+GGG 0.406249 2_4:-8095829 Msa0312890:CDS
TGTTGGGAAAGTAGAGAGAT+TGG 0.411917 2_4:-8095813 Msa0312890:CDS
ATCCAAAGAAAGGGGAAGTA+AGG 0.437384 2_4:-8095928 Msa0312890:CDS
GACAATACAAATCCAAAGAA+AGG 0.438456 2_4:-8095938 Msa0312890:CDS
CTTTGAGAAAACAAGAATCA+TGG 0.448459 2_4:-8097520 Msa0312890:exon
CCTTGGCCAGAAAGTCTACT+AGG 0.449081 2_4:-8097488 Msa0312890:CDS
GTTCCTGACGATTAATCGTC+AGG 0.459884 2_4:-8097466 Msa0312890:CDS
AAAGCTTCGGTTCTTCTCAA+TGG 0.462467 2_4:+8097269 None:intergenic
GTTGGCTTTCCCAAAAGCTT+CGG 0.463303 2_4:+8097256 None:intergenic
ACAATACAAATCCAAAGAAA+GGG 0.465593 2_4:-8095937 Msa0312890:CDS
GCGATTTACATACAAGTATG+TGG 0.471891 2_4:+8095401 None:intergenic
AAGCTGCCCGAGGTGTTTGT+TGG 0.472850 2_4:-8095830 Msa0312890:CDS
GGATGATGATGAAGAGGAAA+GGG 0.474372 2_4:-8097304 Msa0312890:CDS
GTTGGGAAAGTAGAGAGATT+GGG 0.477670 2_4:-8095812 Msa0312890:CDS
AATCATGGGTGTTACCTCCT+TGG 0.479101 2_4:-8097505 Msa0312890:exon
TTCTTGAATAGCTTCTTTGG+TGG 0.492308 2_4:+8096843 None:intergenic
AAGCCAACATCTTGGTGTGC+AGG 0.494557 2_4:-8097241 Msa0312890:intron
TATCCTGACGATTAATCGTC+AGG 0.500747 2_4:+8097463 None:intergenic
TTCAACAACTCCTCTTCCAA+TGG 0.503995 2_4:-8095663 Msa0312890:CDS
TACATGCAAGCTAAATGGTT+GGG 0.506802 2_4:-8095704 Msa0312890:CDS
CAATAAATCAATAGTCAACA+TGG 0.512237 2_4:+8095598 None:intergenic
TTGCCATCTCAAACTCAGCT+TGG 0.517950 2_4:+8095885 None:intergenic
AATGGTTGGGTCCATTTGAA+AGG 0.521633 2_4:-8095691 Msa0312890:CDS
AAGCTGAGTTTGAGATGGCA+AGG 0.523389 2_4:-8095883 Msa0312890:CDS
TGGATGATGATGAAGAGGAA+AGG 0.523495 2_4:-8097305 Msa0312890:CDS
CGATTTACATACAAGTATGT+GGG 0.525714 2_4:+8095402 None:intergenic
TCAACAACTCCTCTTCCAAT+GGG 0.527252 2_4:-8095662 Msa0312890:CDS
TTTGAGAAAACAAGAATCAT+GGG 0.534040 2_4:-8097519 Msa0312890:exon
ACTTCATCAGATATTCCATC+AGG 0.535880 2_4:-8096676 Msa0312890:intron
ACTGACGAAGTGATCATGTC+GGG 0.551370 2_4:-8097375 Msa0312890:CDS
TCAGAAATTCCCATTGGAAG+AGG 0.553074 2_4:+8095653 None:intergenic
TGGCTGCAACAGAAAGATGA+TGG 0.553863 2_4:-8096797 Msa0312890:CDS
ATGTACCTATGCTTCCTCCA+TGG 0.558080 2_4:+8095722 None:intergenic
TTTCCAAGCTGAGTTTGAGA+TGG 0.565289 2_4:-8095888 Msa0312890:CDS
GTTCATTAGAGACAAAGATA+AGG 0.565658 2_4:-8096870 Msa0312890:CDS
AATAACAAAGCCAAAATCAA+AGG 0.568849 2_4:-8095624 Msa0312890:CDS
ACTTTCCCAACAAACACCTC+GGG 0.573313 2_4:+8095824 None:intergenic
GTACATGCAAGCTAAATGGT+TGG 0.573929 2_4:-8095705 Msa0312890:CDS
ATCCTCTCAGAAATTCCCAT+TGG 0.574010 2_4:+8095647 None:intergenic
TACTTTCCCAACAAACACCT+CGG 0.575693 2_4:+8095823 None:intergenic
ACAGCTGTGCAATGCAATGT+TGG 0.576393 2_4:+8095566 None:intergenic
TGGGGCCATGGAGGAAGCAT+AGG 0.577510 2_4:-8095727 Msa0312890:CDS
AGCTGAGTTTGAGATGGCAA+GGG 0.587593 2_4:-8095882 Msa0312890:CDS
CCTAGTAGACTTTCTGGCCA+AGG 0.588067 2_4:+8097488 None:intergenic
CAGGATAGTCTCGAGTCTGA+AGG 0.595130 2_4:-8097447 Msa0312890:CDS
TCACCTGCACACCAAGATGT+TGG 0.598265 2_4:+8097238 None:intergenic
CAATCTTCAGACACGAGTGT+TGG 0.608841 2_4:-8097423 Msa0312890:CDS
GGATTTGGATGATGATGAAG+AGG 0.619315 2_4:-8097310 Msa0312890:CDS
TACTGACGAAGTGATCATGT+CGG 0.631088 2_4:-8097376 Msa0312890:CDS
GGCTGCAACAGAAAGATGAT+GGG 0.637175 2_4:-8096796 Msa0312890:CDS
CAATACAAATCCAAAGAAAG+GGG 0.639538 2_4:-8095936 Msa0312890:CDS
AAATGCACATGGGGCCATGG+AGG 0.645712 2_4:-8095736 Msa0312890:CDS
GCTGAGTTTGAGATGGCAAG+GGG 0.658083 2_4:-8095881 Msa0312890:CDS
TTCCAATGGGAATTTCTGAG+AGG 0.662878 2_4:-8095649 Msa0312890:CDS
AGTAGACTTTCTGGCCAAGG+AGG 0.681329 2_4:+8097491 None:intergenic
ACTCGTGCAGAAGCTGCCCG+AGG 0.684249 2_4:-8095840 Msa0312890:CDS
GATTTACATACAAGTATGTG+GGG 0.685935 2_4:+8095403 None:intergenic
AAAAGCTGTGGAGCAGTGTG+TGG 0.710871 2_4:-8096817 Msa0312890:CDS
TGATGAGGGAAGTTTCTACG+AGG 0.752965 2_4:-8096747 Msa0312890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAAATACATATTAATTT+TGG + chr2_4:8095795-8095814 None:intergenic 10.0%
!! TTAAATCATATTTATTAAGA+AGG + chr2_4:8095922-8095941 None:intergenic 10.0%
!!! TTTTTATTTTATTTTTAGGT+GGG + chr2_4:8096436-8096455 None:intergenic 10.0%
!!! TTTTTTATTTTATTTTTAGG+TGG + chr2_4:8096437-8096456 None:intergenic 10.0%
!!! CACTTTTTTATTTTATTTTT+AGG + chr2_4:8096440-8096459 None:intergenic 10.0%
!! CTAAAAATAAAATAAAAAAG+TGG - chr2_4:8096438-8096457 Msa0312890:intron 10.0%
!!! AATATAATTGATGATATTTT+GGG + chr2_4:8096565-8096584 None:intergenic 10.0%
!!! AAATATAATTGATGATATTT+TGG + chr2_4:8096566-8096585 None:intergenic 10.0%
!!! AATTTAATTAGTTTTTTTAC+TGG - chr2_4:8097395-8097414 Msa0312890:CDS 10.0%
!!! AATCAAATACATATTAATTT+TGG + chr2_4:8095795-8095814 None:intergenic 10.0%
!! TTAAATCATATTTATTAAGA+AGG + chr2_4:8095922-8095941 None:intergenic 10.0%
!!! TTTTTATTTTATTTTTAGGT+GGG + chr2_4:8096436-8096455 None:intergenic 10.0%
!!! TTTTTTATTTTATTTTTAGG+TGG + chr2_4:8096437-8096456 None:intergenic 10.0%
!!! CACTTTTTTATTTTATTTTT+AGG + chr2_4:8096440-8096459 None:intergenic 10.0%
!! CTAAAAATAAAATAAAAAAG+TGG - chr2_4:8096438-8096457 Msa0312890:intron 10.0%
!!! AATATAATTGATGATATTTT+GGG + chr2_4:8096565-8096584 None:intergenic 10.0%
!!! AAATATAATTGATGATATTT+TGG + chr2_4:8096566-8096585 None:intergenic 10.0%
!!! AATTTAATTAGTTTTTTTAC+TGG - chr2_4:8097395-8097414 Msa0312890:CDS 10.0%
!!! ATATGTATTTGATTTTTTGT+TGG - chr2_4:8095801-8095820 Msa0312890:CDS 15.0%
!! ATTTATCTCTATACAAATAT+TGG + chr2_4:8097532-8097551 None:intergenic 15.0%
!!! ATATGTATTTGATTTTTTGT+TGG - chr2_4:8095801-8095820 Msa0312890:CDS 15.0%
!! ATTTATCTCTATACAAATAT+TGG + chr2_4:8097532-8097551 None:intergenic 15.0%
!!! TTTTGTTTTGATCAATCAAT+GGG - chr2_4:8095979-8095998 Msa0312890:intron 20.0%
!!! TGAACTTGTTCTATATATAT+TGG + chr2_4:8096023-8096042 None:intergenic 20.0%
!!! TTTTATGAAAAGCAATATTG+TGG - chr2_4:8096351-8096370 Msa0312890:intron 20.0%
!! AGAGGGATTAAAAAATTAAA+AGG - chr2_4:8096481-8096500 Msa0312890:intron 20.0%
!! GGATTAAAAAATTAAAAGGT+AGG - chr2_4:8096485-8096504 Msa0312890:intron 20.0%
!! GCACATTAACTAATATATAA+AGG + chr2_4:8096852-8096871 None:intergenic 20.0%
!!! TTTTGTTTTGATCAATCAAT+GGG - chr2_4:8095979-8095998 Msa0312890:intron 20.0%
!!! TGAACTTGTTCTATATATAT+TGG + chr2_4:8096023-8096042 None:intergenic 20.0%
!!! TTTTATGAAAAGCAATATTG+TGG - chr2_4:8096351-8096370 Msa0312890:intron 20.0%
!! AGAGGGATTAAAAAATTAAA+AGG - chr2_4:8096481-8096500 Msa0312890:intron 20.0%
!! GGATTAAAAAATTAAAAGGT+AGG - chr2_4:8096485-8096504 Msa0312890:intron 20.0%
!! GCACATTAACTAATATATAA+AGG + chr2_4:8096852-8096871 None:intergenic 20.0%
! TTTGAGAAAACAAGAATCAT+GGG - chr2_4:8095389-8095408 Msa0312890:three_prime_UTR 25.0%
!! TTAGTGTGATTTTATGTTGA+GGG - chr2_4:8095726-8095745 Msa0312890:CDS 25.0%
! CTATAATTATCAGCTAAGTA+CGG - chr2_4:8095860-8095879 Msa0312890:CDS 25.0%
!!! GTTCTAAAAGCATTAGATTT+TGG - chr2_4:8095952-8095971 Msa0312890:CDS 25.0%
!!! CTTTTGTTTTGATCAATCAA+TGG - chr2_4:8095978-8095997 Msa0312890:intron 25.0%
!!! CAATCAATGGGATTTAATTT+TGG - chr2_4:8095991-8096010 Msa0312890:intron 25.0%
! TATTTCTTGAATAGCTTCTT+TGG + chr2_4:8096071-8096090 None:intergenic 25.0%
! ATTCAAGAAATAAAAAGCTG+TGG - chr2_4:8096079-8096098 Msa0312890:intron 25.0%
! GGAAAGAAAGAAAATTGAAA+AGG - chr2_4:8096527-8096546 Msa0312890:intron 25.0%
! TCATGAATTTAAGTCTACTT+TGG + chr2_4:8096778-8096797 None:intergenic 25.0%
!! CACACTATTCTTTTATAGAT+TGG + chr2_4:8096808-8096827 None:intergenic 25.0%
! GTGATATATGCTATTAGATT+AGG + chr2_4:8096910-8096929 None:intergenic 25.0%
! TATATCACAATTAACTATGC+AGG - chr2_4:8096922-8096941 Msa0312890:intron 25.0%
! ATATCACAATTAACTATGCA+GGG - chr2_4:8096923-8096942 Msa0312890:intron 25.0%
! ACAATACAAATCCAAAGAAA+GGG - chr2_4:8096971-8096990 Msa0312890:intron 25.0%
!!! CACTGCATAATATTTTGATT+AGG + chr2_4:8097125-8097144 None:intergenic 25.0%
!!! TTTATCCTTCATGCATTTTT+TGG + chr2_4:8097151-8097170 None:intergenic 25.0%
! AAGGATAAAAAAATGCACAT+GGG - chr2_4:8097162-8097181 Msa0312890:intron 25.0%
! AATAACAAAGCCAAAATCAA+AGG - chr2_4:8097284-8097303 Msa0312890:CDS 25.0%
! CAATAAATCAATAGTCAACA+TGG + chr2_4:8097313-8097332 None:intergenic 25.0%
!!! CATGTTGACTATTGATTTAT+TGG - chr2_4:8097311-8097330 Msa0312890:CDS 25.0%
!!! GTCATTTTGCATTTTTGTTA+TGG - chr2_4:8097417-8097436 Msa0312890:CDS 25.0%
!! TAATTTTCACCAAAGAAAAG+AGG + chr2_4:8097458-8097477 None:intergenic 25.0%
!! CTTTTCTTTGGTGAAAATTA+AGG - chr2_4:8097458-8097477 Msa0312890:CDS 25.0%
! TTTGAGAAAACAAGAATCAT+GGG - chr2_4:8095389-8095408 Msa0312890:three_prime_UTR 25.0%
!! TTAGTGTGATTTTATGTTGA+GGG - chr2_4:8095726-8095745 Msa0312890:CDS 25.0%
! CTATAATTATCAGCTAAGTA+CGG - chr2_4:8095860-8095879 Msa0312890:CDS 25.0%
!!! GTTCTAAAAGCATTAGATTT+TGG - chr2_4:8095952-8095971 Msa0312890:CDS 25.0%
!!! CTTTTGTTTTGATCAATCAA+TGG - chr2_4:8095978-8095997 Msa0312890:intron 25.0%
!!! CAATCAATGGGATTTAATTT+TGG - chr2_4:8095991-8096010 Msa0312890:intron 25.0%
! TATTTCTTGAATAGCTTCTT+TGG + chr2_4:8096071-8096090 None:intergenic 25.0%
! ATTCAAGAAATAAAAAGCTG+TGG - chr2_4:8096079-8096098 Msa0312890:intron 25.0%
! GGAAAGAAAGAAAATTGAAA+AGG - chr2_4:8096527-8096546 Msa0312890:intron 25.0%
! TCATGAATTTAAGTCTACTT+TGG + chr2_4:8096778-8096797 None:intergenic 25.0%
!! CACACTATTCTTTTATAGAT+TGG + chr2_4:8096808-8096827 None:intergenic 25.0%
! GTGATATATGCTATTAGATT+AGG + chr2_4:8096910-8096929 None:intergenic 25.0%
! TATATCACAATTAACTATGC+AGG - chr2_4:8096922-8096941 Msa0312890:intron 25.0%
! ATATCACAATTAACTATGCA+GGG - chr2_4:8096923-8096942 Msa0312890:intron 25.0%
! ACAATACAAATCCAAAGAAA+GGG - chr2_4:8096971-8096990 Msa0312890:intron 25.0%
!!! CACTGCATAATATTTTGATT+AGG + chr2_4:8097125-8097144 None:intergenic 25.0%
!!! TTTATCCTTCATGCATTTTT+TGG + chr2_4:8097151-8097170 None:intergenic 25.0%
! AAGGATAAAAAAATGCACAT+GGG - chr2_4:8097162-8097181 Msa0312890:intron 25.0%
! AATAACAAAGCCAAAATCAA+AGG - chr2_4:8097284-8097303 Msa0312890:CDS 25.0%
! CAATAAATCAATAGTCAACA+TGG + chr2_4:8097313-8097332 None:intergenic 25.0%
!!! CATGTTGACTATTGATTTAT+TGG - chr2_4:8097311-8097330 Msa0312890:CDS 25.0%
!!! GTCATTTTGCATTTTTGTTA+TGG - chr2_4:8097417-8097436 Msa0312890:CDS 25.0%
!! TAATTTTCACCAAAGAAAAG+AGG + chr2_4:8097458-8097477 None:intergenic 25.0%
!! CTTTTCTTTGGTGAAAATTA+AGG - chr2_4:8097458-8097477 Msa0312890:CDS 25.0%
! CTTTGAGAAAACAAGAATCA+TGG - chr2_4:8095388-8095407 Msa0312890:three_prime_UTR 30.0%
TCTATGTCATTCACTTGAAA+TGG - chr2_4:8095577-8095596 Msa0312890:CDS 30.0%
! TCATTCACTTGAAATGGATT+TGG - chr2_4:8095583-8095602 Msa0312890:CDS 30.0%
! GTTAGTGTGATTTTATGTTG+AGG - chr2_4:8095725-8095744 Msa0312890:CDS 30.0%
!!! CTAAAAGCATTAGATTTTGG+AGG - chr2_4:8095955-8095974 Msa0312890:CDS 30.0%
GTTCATTAGAGACAAAGATA+AGG - chr2_4:8096038-8096057 Msa0312890:intron 30.0%
AATGAATAACATGTACCTGA+TGG + chr2_4:8096250-8096269 None:intergenic 30.0%
TATGAAAAGCAATATTGTGG+TGG - chr2_4:8096354-8096373 Msa0312890:intron 30.0%
ATGAAAAGCAATATTGTGGT+GGG - chr2_4:8096355-8096374 Msa0312890:intron 30.0%
!!! TATTTTTAGGTGGGTGAAAA+GGG + chr2_4:8096427-8096446 None:intergenic 30.0%
!!! TTATTTTTAGGTGGGTGAAA+AGG + chr2_4:8096428-8096447 None:intergenic 30.0%
GGAAATGAATAGATTCTTCA+TGG - chr2_4:8096506-8096525 Msa0312890:intron 30.0%
ACGTTAAAAGTTTCAGATTG+AGG + chr2_4:8096599-8096618 None:intergenic 30.0%
GAATTTAAGTCTACTTTGGT+TGG + chr2_4:8096774-8096793 None:intergenic 30.0%
TATCACAATTAACTATGCAG+GGG - chr2_4:8096924-8096943 Msa0312890:intron 30.0%
GACAATACAAATCCAAAGAA+AGG - chr2_4:8096970-8096989 Msa0312890:intron 30.0%
CAATACAAATCCAAAGAAAG+GGG - chr2_4:8096972-8096991 Msa0312890:intron 30.0%
GAAGGATAAAAAAATGCACA+TGG - chr2_4:8097161-8097180 Msa0312890:intron 30.0%
AGGATAAAAAAATGCACATG+GGG - chr2_4:8097163-8097182 Msa0312890:intron 30.0%
AAGGTTGTGTGATTGTAAAA+AGG - chr2_4:8097366-8097385 Msa0312890:CDS 30.0%
! TCTTTTGTTCCTCTTTTCTT+TGG - chr2_4:8097446-8097465 Msa0312890:CDS 30.0%
GATTTACATACAAGTATGTG+GGG + chr2_4:8097508-8097527 None:intergenic 30.0%
CGATTTACATACAAGTATGT+GGG + chr2_4:8097509-8097528 None:intergenic 30.0%
! CTTTGAGAAAACAAGAATCA+TGG - chr2_4:8095388-8095407 Msa0312890:three_prime_UTR 30.0%
TCTATGTCATTCACTTGAAA+TGG - chr2_4:8095577-8095596 Msa0312890:CDS 30.0%
! TCATTCACTTGAAATGGATT+TGG - chr2_4:8095583-8095602 Msa0312890:CDS 30.0%
! GTTAGTGTGATTTTATGTTG+AGG - chr2_4:8095725-8095744 Msa0312890:CDS 30.0%
!!! CTAAAAGCATTAGATTTTGG+AGG - chr2_4:8095955-8095974 Msa0312890:CDS 30.0%
GTTCATTAGAGACAAAGATA+AGG - chr2_4:8096038-8096057 Msa0312890:intron 30.0%
AATGAATAACATGTACCTGA+TGG + chr2_4:8096250-8096269 None:intergenic 30.0%
TATGAAAAGCAATATTGTGG+TGG - chr2_4:8096354-8096373 Msa0312890:intron 30.0%
ATGAAAAGCAATATTGTGGT+GGG - chr2_4:8096355-8096374 Msa0312890:intron 30.0%
!!! TATTTTTAGGTGGGTGAAAA+GGG + chr2_4:8096427-8096446 None:intergenic 30.0%
!!! TTATTTTTAGGTGGGTGAAA+AGG + chr2_4:8096428-8096447 None:intergenic 30.0%
GGAAATGAATAGATTCTTCA+TGG - chr2_4:8096506-8096525 Msa0312890:intron 30.0%
ACGTTAAAAGTTTCAGATTG+AGG + chr2_4:8096599-8096618 None:intergenic 30.0%
GAATTTAAGTCTACTTTGGT+TGG + chr2_4:8096774-8096793 None:intergenic 30.0%
TATCACAATTAACTATGCAG+GGG - chr2_4:8096924-8096943 Msa0312890:intron 30.0%
GACAATACAAATCCAAAGAA+AGG - chr2_4:8096970-8096989 Msa0312890:intron 30.0%
CAATACAAATCCAAAGAAAG+GGG - chr2_4:8096972-8096991 Msa0312890:intron 30.0%
GAAGGATAAAAAAATGCACA+TGG - chr2_4:8097161-8097180 Msa0312890:intron 30.0%
AGGATAAAAAAATGCACATG+GGG - chr2_4:8097163-8097182 Msa0312890:intron 30.0%
AAGGTTGTGTGATTGTAAAA+AGG - chr2_4:8097366-8097385 Msa0312890:CDS 30.0%
! TCTTTTGTTCCTCTTTTCTT+TGG - chr2_4:8097446-8097465 Msa0312890:CDS 30.0%
GATTTACATACAAGTATGTG+GGG + chr2_4:8097508-8097527 None:intergenic 30.0%
CGATTTACATACAAGTATGT+GGG + chr2_4:8097509-8097528 None:intergenic 30.0%
TTCTTGAATAGCTTCTTTGG+TGG + chr2_4:8096068-8096087 None:intergenic 35.0%
GTGCTATCTGCAAAACAAAA+TGG - chr2_4:8096206-8096225 Msa0312890:intron 35.0%
ACTTCATCAGATATTCCATC+AGG - chr2_4:8096232-8096251 Msa0312890:intron 35.0%
!! AATATTGTGGTGGGTCTAAT+AGG - chr2_4:8096364-8096383 Msa0312890:intron 35.0%
! AAGTCTACTTTGGTTGGTAT+TGG + chr2_4:8096768-8096787 None:intergenic 35.0%
ATAGGTACATGCAAGCTAAA+TGG - chr2_4:8097199-8097218 Msa0312890:intron 35.0%
TACATGCAAGCTAAATGGTT+GGG - chr2_4:8097204-8097223 Msa0312890:intron 35.0%
! GTTGAAGTGTTCCTTTCAAA+TGG + chr2_4:8097231-8097250 None:intergenic 35.0%
!! AACATGGATGCCTTTGATTT+TGG + chr2_4:8097297-8097316 None:intergenic 35.0%
GCGATTTACATACAAGTATG+TGG + chr2_4:8097510-8097529 None:intergenic 35.0%
TTCTTGAATAGCTTCTTTGG+TGG + chr2_4:8096068-8096087 None:intergenic 35.0%
GTGCTATCTGCAAAACAAAA+TGG - chr2_4:8096206-8096225 Msa0312890:intron 35.0%
ACTTCATCAGATATTCCATC+AGG - chr2_4:8096232-8096251 Msa0312890:intron 35.0%
!! AATATTGTGGTGGGTCTAAT+AGG - chr2_4:8096364-8096383 Msa0312890:intron 35.0%
! AAGTCTACTTTGGTTGGTAT+TGG + chr2_4:8096768-8096787 None:intergenic 35.0%
ATAGGTACATGCAAGCTAAA+TGG - chr2_4:8097199-8097218 Msa0312890:intron 35.0%
TACATGCAAGCTAAATGGTT+GGG - chr2_4:8097204-8097223 Msa0312890:intron 35.0%
! GTTGAAGTGTTCCTTTCAAA+TGG + chr2_4:8097231-8097250 None:intergenic 35.0%
!! AACATGGATGCCTTTGATTT+TGG + chr2_4:8097297-8097316 None:intergenic 35.0%
GCGATTTACATACAAGTATG+TGG + chr2_4:8097510-8097529 None:intergenic 35.0%
TATCCTGACGATTAATCGTC+AGG + chr2_4:8095448-8095467 None:intergenic 40.0%
TACTGACGAAGTGATCATGT+CGG - chr2_4:8095532-8095551 Msa0312890:three_prime_UTR 40.0%
! GGATTTGGATGATGATGAAG+AGG - chr2_4:8095598-8095617 Msa0312890:CDS 40.0%
! TGGATGATGATGAAGAGGAA+AGG - chr2_4:8095603-8095622 Msa0312890:CDS 40.0%
! GGATGATGATGAAGAGGAAA+GGG - chr2_4:8095604-8095623 Msa0312890:CDS 40.0%
AAAGCTTCGGTTCTTCTCAA+TGG + chr2_4:8095642-8095661 None:intergenic 40.0%
! TTGAGAAGAACCGAAGCTTT+TGG - chr2_4:8095642-8095661 Msa0312890:CDS 40.0%
! TGAGAAGAACCGAAGCTTTT+GGG - chr2_4:8095643-8095662 Msa0312890:CDS 40.0%
!! TTTTGGGAAAGCCAACATCT+TGG - chr2_4:8095659-8095678 Msa0312890:CDS 40.0%
CTGCAAAAACTGCTTGATGA+GGG - chr2_4:8096147-8096166 Msa0312890:intron 40.0%
AATGATGCTCTTGTGGTAAG+AGG - chr2_4:8096463-8096482 Msa0312890:intron 40.0%
ATGATGCTCTTGTGGTAAGA+GGG - chr2_4:8096464-8096483 Msa0312890:intron 40.0%
ACTTCACTCTATCGACATAG+AGG - chr2_4:8096730-8096749 Msa0312890:CDS 40.0%
CTTCACTCTATCGACATAGA+GGG - chr2_4:8096731-8096750 Msa0312890:CDS 40.0%
ATCCAAAGAAAGGGGAAGTA+AGG - chr2_4:8096980-8096999 Msa0312890:intron 40.0%
ATCCTTACTTCCCCTTTCTT+TGG + chr2_4:8096985-8097004 None:intergenic 40.0%
TTTCCAAGCTGAGTTTGAGA+TGG - chr2_4:8097020-8097039 Msa0312890:intron 40.0%
TACTTTCCCAACAAACACCT+CGG + chr2_4:8097088-8097107 None:intergenic 40.0%
TGTTGGGAAAGTAGAGAGAT+TGG - chr2_4:8097095-8097114 Msa0312890:intron 40.0%
GTTGGGAAAGTAGAGAGATT+GGG - chr2_4:8097096-8097115 Msa0312890:intron 40.0%
TGCAGCCAAAAAATGCATGA+AGG - chr2_4:8097143-8097162 Msa0312890:intron 40.0%
GTACATGCAAGCTAAATGGT+TGG - chr2_4:8097203-8097222 Msa0312890:intron 40.0%
AATGGTTGGGTCCATTTGAA+AGG - chr2_4:8097217-8097236 Msa0312890:intron 40.0%
TTCAACAACTCCTCTTCCAA+TGG - chr2_4:8097245-8097264 Msa0312890:CDS 40.0%
TCAACAACTCCTCTTCCAAT+GGG - chr2_4:8097246-8097265 Msa0312890:CDS 40.0%
TCAGAAATTCCCATTGGAAG+AGG + chr2_4:8097258-8097277 None:intergenic 40.0%
TTCCAATGGGAATTTCTGAG+AGG - chr2_4:8097259-8097278 Msa0312890:CDS 40.0%
ATCCTCTCAGAAATTCCCAT+TGG + chr2_4:8097264-8097283 None:intergenic 40.0%
ATTGCATTGCACAGCTGTTA+AGG - chr2_4:8097347-8097366 Msa0312890:CDS 40.0%
TATCCTGACGATTAATCGTC+AGG + chr2_4:8095448-8095467 None:intergenic 40.0%
TACTGACGAAGTGATCATGT+CGG - chr2_4:8095532-8095551 Msa0312890:three_prime_UTR 40.0%
! GGATTTGGATGATGATGAAG+AGG - chr2_4:8095598-8095617 Msa0312890:CDS 40.0%
! TGGATGATGATGAAGAGGAA+AGG - chr2_4:8095603-8095622 Msa0312890:CDS 40.0%
! GGATGATGATGAAGAGGAAA+GGG - chr2_4:8095604-8095623 Msa0312890:CDS 40.0%
AAAGCTTCGGTTCTTCTCAA+TGG + chr2_4:8095642-8095661 None:intergenic 40.0%
! TTGAGAAGAACCGAAGCTTT+TGG - chr2_4:8095642-8095661 Msa0312890:CDS 40.0%
! TGAGAAGAACCGAAGCTTTT+GGG - chr2_4:8095643-8095662 Msa0312890:CDS 40.0%
!! TTTTGGGAAAGCCAACATCT+TGG - chr2_4:8095659-8095678 Msa0312890:CDS 40.0%
CTGCAAAAACTGCTTGATGA+GGG - chr2_4:8096147-8096166 Msa0312890:intron 40.0%
AATGATGCTCTTGTGGTAAG+AGG - chr2_4:8096463-8096482 Msa0312890:intron 40.0%
ATGATGCTCTTGTGGTAAGA+GGG - chr2_4:8096464-8096483 Msa0312890:intron 40.0%
ACTTCACTCTATCGACATAG+AGG - chr2_4:8096730-8096749 Msa0312890:CDS 40.0%
CTTCACTCTATCGACATAGA+GGG - chr2_4:8096731-8096750 Msa0312890:CDS 40.0%
ATCCAAAGAAAGGGGAAGTA+AGG - chr2_4:8096980-8096999 Msa0312890:intron 40.0%
ATCCTTACTTCCCCTTTCTT+TGG + chr2_4:8096985-8097004 None:intergenic 40.0%
TTTCCAAGCTGAGTTTGAGA+TGG - chr2_4:8097020-8097039 Msa0312890:intron 40.0%
TACTTTCCCAACAAACACCT+CGG + chr2_4:8097088-8097107 None:intergenic 40.0%
TGTTGGGAAAGTAGAGAGAT+TGG - chr2_4:8097095-8097114 Msa0312890:intron 40.0%
GTTGGGAAAGTAGAGAGATT+GGG - chr2_4:8097096-8097115 Msa0312890:intron 40.0%
TGCAGCCAAAAAATGCATGA+AGG - chr2_4:8097143-8097162 Msa0312890:intron 40.0%
GTACATGCAAGCTAAATGGT+TGG - chr2_4:8097203-8097222 Msa0312890:intron 40.0%
AATGGTTGGGTCCATTTGAA+AGG - chr2_4:8097217-8097236 Msa0312890:intron 40.0%
TTCAACAACTCCTCTTCCAA+TGG - chr2_4:8097245-8097264 Msa0312890:CDS 40.0%
TCAACAACTCCTCTTCCAAT+GGG - chr2_4:8097246-8097265 Msa0312890:CDS 40.0%
TCAGAAATTCCCATTGGAAG+AGG + chr2_4:8097258-8097277 None:intergenic 40.0%
TTCCAATGGGAATTTCTGAG+AGG - chr2_4:8097259-8097278 Msa0312890:CDS 40.0%
ATCCTCTCAGAAATTCCCAT+TGG + chr2_4:8097264-8097283 None:intergenic 40.0%
ATTGCATTGCACAGCTGTTA+AGG - chr2_4:8097347-8097366 Msa0312890:CDS 40.0%
! AATCATGGGTGTTACCTCCT+TGG - chr2_4:8095403-8095422 Msa0312890:three_prime_UTR 45.0%
CAGGAACCTAGTAGACTTTC+TGG + chr2_4:8095429-8095448 None:intergenic 45.0%
GTTCCTGACGATTAATCGTC+AGG - chr2_4:8095442-8095461 Msa0312890:three_prime_UTR 45.0%
CAATCTTCAGACACGAGTGT+TGG - chr2_4:8095485-8095504 Msa0312890:three_prime_UTR 45.0%
ACTGACGAAGTGATCATGTC+GGG - chr2_4:8095533-8095552 Msa0312890:three_prime_UTR 45.0%
!! GTTGGCTTTCCCAAAAGCTT+CGG + chr2_4:8095655-8095674 None:intergenic 45.0%
TGGCTGCAACAGAAAGATGA+TGG - chr2_4:8096111-8096130 Msa0312890:intron 45.0%
GGCTGCAACAGAAAGATGAT+GGG - chr2_4:8096112-8096131 Msa0312890:intron 45.0%
! CATCAAGCAGTTTTTGCAGG+TGG + chr2_4:8096146-8096165 None:intergenic 45.0%
! CCTCATCAAGCAGTTTTTGC+AGG + chr2_4:8096149-8096168 None:intergenic 45.0%
CCTGCAAAAACTGCTTGATG+AGG - chr2_4:8096146-8096165 Msa0312890:intron 45.0%
TGATGAGGGAAGTTTCTACG+AGG - chr2_4:8096161-8096180 Msa0312890:intron 45.0%
TCTACGAGGCTTCAGAAATC+TGG - chr2_4:8096175-8096194 Msa0312890:intron 45.0%
!! TGTGGTGGGTCTAATAGGAT+AGG - chr2_4:8096369-8096388 Msa0312890:intron 45.0%
AGTGGTGAATGATGCTCTTG+TGG - chr2_4:8096456-8096475 Msa0312890:intron 45.0%
TCGATAGAGTGAAGTCATCG+CGG + chr2_4:8096725-8096744 None:intergenic 45.0%
! TGCAGGGGAACACACATTTT+TGG - chr2_4:8096939-8096958 Msa0312890:intron 45.0%
TTGCCATCTCAAACTCAGCT+TGG + chr2_4:8097026-8097045 None:intergenic 45.0%
! AAGCTGAGTTTGAGATGGCA+AGG - chr2_4:8097025-8097044 Msa0312890:intron 45.0%
! AGCTGAGTTTGAGATGGCAA+GGG - chr2_4:8097026-8097045 Msa0312890:intron 45.0%
ACTTTCCCAACAAACACCTC+GGG + chr2_4:8097087-8097106 None:intergenic 45.0%
AAAAAATGCACATGGGGCCA+TGG - chr2_4:8097169-8097188 Msa0312890:intron 45.0%
ATGTACCTATGCTTCCTCCA+TGG + chr2_4:8097189-8097208 None:intergenic 45.0%
ACAGCTGTGCAATGCAATGT+TGG + chr2_4:8097345-8097364 None:intergenic 45.0%
! AATCATGGGTGTTACCTCCT+TGG - chr2_4:8095403-8095422 Msa0312890:three_prime_UTR 45.0%
CAGGAACCTAGTAGACTTTC+TGG + chr2_4:8095429-8095448 None:intergenic 45.0%
GTTCCTGACGATTAATCGTC+AGG - chr2_4:8095442-8095461 Msa0312890:three_prime_UTR 45.0%
CAATCTTCAGACACGAGTGT+TGG - chr2_4:8095485-8095504 Msa0312890:three_prime_UTR 45.0%
ACTGACGAAGTGATCATGTC+GGG - chr2_4:8095533-8095552 Msa0312890:three_prime_UTR 45.0%
!! GTTGGCTTTCCCAAAAGCTT+CGG + chr2_4:8095655-8095674 None:intergenic 45.0%
TGGCTGCAACAGAAAGATGA+TGG - chr2_4:8096111-8096130 Msa0312890:intron 45.0%
GGCTGCAACAGAAAGATGAT+GGG - chr2_4:8096112-8096131 Msa0312890:intron 45.0%
! CATCAAGCAGTTTTTGCAGG+TGG + chr2_4:8096146-8096165 None:intergenic 45.0%
! CCTCATCAAGCAGTTTTTGC+AGG + chr2_4:8096149-8096168 None:intergenic 45.0%
CCTGCAAAAACTGCTTGATG+AGG - chr2_4:8096146-8096165 Msa0312890:intron 45.0%
TGATGAGGGAAGTTTCTACG+AGG - chr2_4:8096161-8096180 Msa0312890:intron 45.0%
TCTACGAGGCTTCAGAAATC+TGG - chr2_4:8096175-8096194 Msa0312890:intron 45.0%
!! TGTGGTGGGTCTAATAGGAT+AGG - chr2_4:8096369-8096388 Msa0312890:intron 45.0%
AGTGGTGAATGATGCTCTTG+TGG - chr2_4:8096456-8096475 Msa0312890:intron 45.0%
TCGATAGAGTGAAGTCATCG+CGG + chr2_4:8096725-8096744 None:intergenic 45.0%
! TGCAGGGGAACACACATTTT+TGG - chr2_4:8096939-8096958 Msa0312890:intron 45.0%
TTGCCATCTCAAACTCAGCT+TGG + chr2_4:8097026-8097045 None:intergenic 45.0%
! AAGCTGAGTTTGAGATGGCA+AGG - chr2_4:8097025-8097044 Msa0312890:intron 45.0%
! AGCTGAGTTTGAGATGGCAA+GGG - chr2_4:8097026-8097045 Msa0312890:intron 45.0%
ACTTTCCCAACAAACACCTC+GGG + chr2_4:8097087-8097106 None:intergenic 45.0%
AAAAAATGCACATGGGGCCA+TGG - chr2_4:8097169-8097188 Msa0312890:intron 45.0%
ATGTACCTATGCTTCCTCCA+TGG + chr2_4:8097189-8097208 None:intergenic 45.0%
ACAGCTGTGCAATGCAATGT+TGG + chr2_4:8097345-8097364 None:intergenic 45.0%
!!! TGAATTTTTAATATTATATA+TGG - chr2_4:8095698-8095717 Msa0312890:CDS 5.0%
!!! TGAATTTTTAATATTATATA+TGG - chr2_4:8095698-8095717 Msa0312890:CDS 5.0%
! AGTAGACTTTCTGGCCAAGG+AGG + chr2_4:8095420-8095439 None:intergenic 50.0%
! CCTAGTAGACTTTCTGGCCA+AGG + chr2_4:8095423-8095442 None:intergenic 50.0%
CCTTGGCCAGAAAGTCTACT+AGG - chr2_4:8095420-8095439 Msa0312890:three_prime_UTR 50.0%
CAGGATAGTCTCGAGTCTGA+AGG - chr2_4:8095461-8095480 Msa0312890:three_prime_UTR 50.0%
! AAGCCAACATCTTGGTGTGC+AGG - chr2_4:8095667-8095686 Msa0312890:CDS 50.0%
TCACCTGCACACCAAGATGT+TGG + chr2_4:8095673-8095692 None:intergenic 50.0%
AAAAGCTGTGGAGCAGTGTG+TGG - chr2_4:8096091-8096110 Msa0312890:intron 50.0%
! GCAGTTTTTGCAGGTGGTGA+TGG + chr2_4:8096140-8096159 None:intergenic 50.0%
! GCTGAGTTTGAGATGGCAAG+GGG - chr2_4:8097027-8097046 Msa0312890:intron 50.0%
! AGTAGACTTTCTGGCCAAGG+AGG + chr2_4:8095420-8095439 None:intergenic 50.0%
! CCTAGTAGACTTTCTGGCCA+AGG + chr2_4:8095423-8095442 None:intergenic 50.0%
CCTTGGCCAGAAAGTCTACT+AGG - chr2_4:8095420-8095439 Msa0312890:three_prime_UTR 50.0%
CAGGATAGTCTCGAGTCTGA+AGG - chr2_4:8095461-8095480 Msa0312890:three_prime_UTR 50.0%
! AAGCCAACATCTTGGTGTGC+AGG - chr2_4:8095667-8095686 Msa0312890:CDS 50.0%
TCACCTGCACACCAAGATGT+TGG + chr2_4:8095673-8095692 None:intergenic 50.0%
AAAAGCTGTGGAGCAGTGTG+TGG - chr2_4:8096091-8096110 Msa0312890:intron 50.0%
! GCAGTTTTTGCAGGTGGTGA+TGG + chr2_4:8096140-8096159 None:intergenic 50.0%
! GCTGAGTTTGAGATGGCAAG+GGG - chr2_4:8097027-8097046 Msa0312890:intron 50.0%
! AAGCTGCCCGAGGTGTTTGT+TGG - chr2_4:8097078-8097097 Msa0312890:intron 55.0%
! AGCTGCCCGAGGTGTTTGTT+GGG - chr2_4:8097079-8097098 Msa0312890:intron 55.0%
AAATGCACATGGGGCCATGG+AGG - chr2_4:8097172-8097191 Msa0312890:intron 55.0%
! AAGCTGCCCGAGGTGTTTGT+TGG - chr2_4:8097078-8097097 Msa0312890:intron 55.0%
! AGCTGCCCGAGGTGTTTGTT+GGG - chr2_4:8097079-8097098 Msa0312890:intron 55.0%
AAATGCACATGGGGCCATGG+AGG - chr2_4:8097172-8097191 Msa0312890:intron 55.0%
! TGGGGCCATGGAGGAAGCAT+AGG - chr2_4:8097181-8097200 Msa0312890:intron 60.0%
! TGGGGCCATGGAGGAAGCAT+AGG - chr2_4:8097181-8097200 Msa0312890:intron 60.0%
ACTCGTGCAGAAGCTGCCCG+AGG - chr2_4:8097068-8097087 Msa0312890:intron 65.0%
ACTCGTGCAGAAGCTGCCCG+AGG - chr2_4:8097068-8097087 Msa0312890:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 8095374 8097556 8095374 ID=Msa0312890;Name=Msa0312890
chr2_4 mRNA 8095374 8097556 8095374 ID=Msa0312890-mRNA-1;Parent=Msa0312890;Name=Msa0312890-mRNA-1;_AED=0.02;_eAED=0.02;_QI=33|1|1|1|1|1|3|179|316
chr2_4 exon 8095374 8095986 8095374 ID=Msa0312890-mRNA-1:exon:3154;Parent=Msa0312890-mRNA-1
chr2_4 exon 8096677 8096911 8096677 ID=Msa0312890-mRNA-1:exon:3153;Parent=Msa0312890-mRNA-1
chr2_4 exon 8097242 8097556 8097242 ID=Msa0312890-mRNA-1:exon:3152;Parent=Msa0312890-mRNA-1
chr2_4 five_prime_UTR 8097524 8097556 8097524 ID=Msa0312890-mRNA-1:five_prime_utr;Parent=Msa0312890-mRNA-1
chr2_4 CDS 8097242 8097523 8097242 ID=Msa0312890-mRNA-1:cds;Parent=Msa0312890-mRNA-1
chr2_4 CDS 8096677 8096911 8096677 ID=Msa0312890-mRNA-1:cds;Parent=Msa0312890-mRNA-1
chr2_4 CDS 8095553 8095986 8095553 ID=Msa0312890-mRNA-1:cds;Parent=Msa0312890-mRNA-1
chr2_4 three_prime_UTR 8095374 8095552 8095374 ID=Msa0312890-mRNA-1:three_prime_utr;Parent=Msa0312890-mRNA-1
Gene Sequence

>Msa0312890

ATGGGTGTTACCTCCTTGGCCAGAAAGTCTACTAGGTTCCTGACGATTAATCGTCAGGATAGTCTCGAGTCTGAAGGACAATCTTCAGACACGAGTGTTGGTGATGTTGAGTTTGAATTTCTTAATACTGACGAAGTGATCATGTCGGGTCAAAGTGCTAGTAGTGATGATCTATGTCATTCACTTGAAATGGATTTGGATGATGATGAAGAGGAAAGGGATTCAAGTGATACCATTGAGAAGAACCGAAGCTTTTGGGAAAGCCAACATCTTGGTGTGCAGACCAATATATATAGAACAAGTTCATTAGAGACAAAGATAAGGAGTGCCACCAAAGAAGCTATTCAAGAAATAAAAAGCTGTGGAGCAGTGTGTGGCTGCAACAGAAAGATGATGGGTGCCATCACCACCTGCAAAAACTGCTTGATGAGGGAAGTTTCTACGAGGCTTCAGAAATCTGGTTTCAATAGTGCTATCTGCAAAACAAAATGGAGAACTTCATCAGATATTCCATCAGGGGAACACACATTTTTGGATGTGATAGACAATACAAATCCAAAGAAAGGGGAAGTAAGGATCATGATTGAGCTGAATTTCCAAGCTGAGTTTGAGATGGCAAGGGGAAGTGATGAATACAATAAACTCGTGCAGAAGCTGCCCGAGGTGTTTGTTGGGAAAGTAGAGAGATTGGGCAACCTAATCAAAATATTATGCAGTGCAGCCAAAAAATGCATGAAGGATAAAAAAATGCACATGGGGCCATGGAGGAAGCATAGGTACATGCAAGCTAAATGGTTGGGTCCATTTGAAAGGAACACTTCAACAACTCCTCTTCCAATGGGAATTTCTGAGAGGATAATAACAAAGCCAAAATCAAAGGCATCCATGTTGACTATTGATTTATTGGAGAAGCTTCCAACATTGCATTGCACAGCTGTTAAGGTTGTGTGA
Protein sequence

>Msa0312890

MGVTSLARKSTRFLTINRQDSLESEGQSSDTSVGDVEFEFLNTDEVIMSGQSASSDDLCHSLEMDLDDDEEERDSSDTIEKNRSFWESQHLGVQTNIYRTSSLETKIRSATKEAIQEIKSCGAVCGCNRKMMGAITTCKNCLMREVSTRLQKSGFNSAICKTKWRTSSDIPSGEHTFLDVIDNTNPKKGEVRIMIELNFQAEFEMARGSDEYNKLVQKLPEVFVGKVERLGNLIKILCSAAKKCMKDKKMHMGPWRKHRYMQAKWLGPFERNTSTTPLPMGISERIITKPKSKASMLTIDLLEKLPTLHCTAVKVV*