AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0313000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0313000 MtrunA17_Chr2g0282621 100.000 172 0 0 1 172 1 172 5.07e-124 346
Msa0313000 MtrunA17_Chr2g0316931 44.385 187 79 5 4 169 20 202 2.57e-32 114
Msa0313000 MtrunA17_Chr2g0282651 81.967 61 11 0 11 71 66 126 7.87e-30 109
Msa0313000 MtrunA17_Chr5g0438831 75.000 68 17 0 4 71 35 102 9.32e-30 110
Msa0313000 MtrunA17_Chr3g0099871 41.176 187 78 5 11 168 23 206 5.10e-29 106
Msa0313000 MtrunA17_Chr5g0438801 74.242 66 17 0 6 71 42 107 7.42e-29 107
Msa0313000 MtrunA17_Chr7g0221471 74.138 58 15 0 14 71 50 107 9.95e-26 97.1
Msa0313000 MtrunA17_Chr7g0221501 74.138 58 15 0 14 71 50 107 1.26e-25 96.7
Msa0313000 MtrunA17_Chr2g0283181 70.149 67 19 1 12 77 146 212 1.60e-25 99.4
Msa0313000 MtrunA17_Chr8g0367911 76.786 56 13 0 15 70 44 99 3.46e-25 98.2
Msa0313000 MtrunA17_Chr5g0412641 78.571 56 12 0 15 70 46 101 8.58e-25 98.6
Msa0313000 MtrunA17_Chr8g0344961 62.025 79 29 1 7 84 116 194 2.13e-24 97.4
Msa0313000 MtrunA17_Chr2g0283171 65.152 66 22 1 14 78 62 127 3.85e-24 92.4
Msa0313000 MtrunA17_Chr2g0334031 60.256 78 30 1 11 87 113 190 4.67e-24 96.7
Msa0313000 MtrunA17_Chr7g0252381 75.862 58 14 0 13 70 40 97 7.94e-24 94.4
Msa0313000 MtrunA17_Chr4g0046161 58.904 73 29 1 7 78 49 121 5.66e-23 88.2
Msa0313000 MtrunA17_Chr4g0066931 70.690 58 17 0 13 70 51 108 7.52e-23 92.8
Msa0313000 MtrunA17_Chr2g0295421 65.625 64 22 0 11 74 92 155 7.76e-23 91.3
Msa0313000 MtrunA17_Chr1g0195151 68.852 61 19 0 11 71 73 133 8.18e-23 92.4
Msa0313000 MtrunA17_Chr8g0383591 71.930 57 16 0 15 71 145 201 1.44e-22 91.7
Msa0313000 MtrunA17_Chr1g0170531 59.722 72 28 1 1 71 75 146 1.72e-22 90.1
Msa0313000 MtrunA17_Chr2g0286161 68.966 58 18 0 13 70 48 105 1.94e-22 91.3
Msa0313000 MtrunA17_Chr5g0396911 59.722 72 29 0 15 86 112 183 2.04e-22 91.3
Msa0313000 MtrunA17_Chr4g0044911 71.930 57 16 0 15 71 96 152 4.37e-22 89.0
Msa0313000 MtrunA17_Chr8g0335311 60.563 71 20 2 9 71 83 153 5.49e-22 87.8
Msa0313000 MtrunA17_Chr4g0044871 70.175 57 17 0 15 71 96 152 1.16e-21 87.8
Msa0313000 MtrunA17_Chr4g0055761 69.492 59 17 1 14 71 144 202 1.26e-21 88.6
Msa0313000 MtrunA17_Chr4g0044881 65.574 61 21 0 11 71 110 170 1.67e-21 87.4
Msa0313000 MtrunA17_Chr8g0335331 70.690 58 16 1 15 71 125 182 2.25e-21 86.3
Msa0313000 MtrunA17_Chr4g0055781 71.186 59 16 1 14 71 101 159 2.64e-21 87.4
Msa0313000 MtrunA17_Chr4g0044901 70.175 57 17 0 15 71 96 152 2.69e-21 86.7
Msa0313000 MtrunA17_Chr1g0196871 69.492 59 17 1 14 71 15 73 3.12e-21 83.2
Msa0313000 MtrunA17_Chr4g0055801 64.615 65 22 1 8 71 147 211 3.50e-21 87.8
Msa0313000 MtrunA17_Chr4g0062551 60.606 66 26 0 6 71 44 109 3.55e-21 84.3
Msa0313000 MtrunA17_Chr8g0335321 68.966 58 17 1 15 71 96 153 3.58e-21 85.9
Msa0313000 MtrunA17_Chr1g0186731 65.152 66 22 1 7 71 13 78 3.72e-21 84.3
Msa0313000 MtrunA17_Chr7g0250731 70.690 58 16 1 15 71 61 118 5.36e-21 85.5
Msa0313000 MtrunA17_Chr7g0250711 57.895 76 24 2 4 71 42 117 6.03e-21 85.5
Msa0313000 MtrunA17_Chr7g0250721 70.690 58 16 1 15 71 61 118 9.00e-21 85.1
Msa0313000 MtrunA17_Chr4g0062161 60.606 66 26 0 6 71 44 109 9.72e-21 84.7
Msa0313000 MtrunA17_Chr5g0438841 38.650 163 78 5 8 169 9 150 1.24e-20 83.6
Msa0313000 MtrunA17_Chr4g0002631 63.333 60 22 0 15 74 8 67 1.80e-20 84.0
Msa0313000 MtrunA17_Chr3g0126321 54.167 72 33 0 8 79 106 177 1.94e-20 86.7
Msa0313000 MtrunA17_Chr1g0184031 52.222 90 32 2 1 79 60 149 1.96e-20 84.3
Msa0313000 MtrunA17_Chr2g0297331 61.429 70 26 1 3 71 2 71 3.11e-20 81.6
Msa0313000 MtrunA17_Chr1g0184071 41.538 130 62 3 3 131 57 173 3.43e-20 82.4
Msa0313000 MtrunA17_Chr3g0137174 61.667 60 23 0 15 74 8 67 3.78e-20 82.8
Msa0313000 MtrunA17_Chr1g0200931 60.938 64 24 1 8 70 16 79 4.08e-20 81.6
Msa0313000 MtrunA17_Chr4g0026931 63.077 65 23 1 16 79 132 196 4.65e-20 84.3
Msa0313000 MtrunA17_Chr1g0158971 64.062 64 22 1 12 74 112 175 4.95e-20 85.1
Msa0313000 MtrunA17_Chr4g0026881 60.606 66 25 1 15 79 97 162 5.35e-20 83.6
Msa0313000 MtrunA17_Chr3g0115631 61.538 65 25 0 15 79 150 214 5.69e-20 85.1
Msa0313000 MtrunA17_Chr4g0063751 44.762 105 52 1 15 119 7 105 6.99e-20 82.8
Msa0313000 MtrunA17_Chr1g0184011 57.746 71 29 1 10 79 79 149 9.85e-20 82.4
Msa0313000 MtrunA17_Chr1g0184081 66.129 62 20 1 11 71 17 78 9.90e-20 80.5
Msa0313000 MtrunA17_Chr8g0382491 59.375 64 26 0 15 78 113 176 1.28e-19 83.2
Msa0313000 MtrunA17_Chr8g0387801 67.857 56 18 0 15 70 107 162 1.35e-19 83.6
Msa0313000 MtrunA17_Chr8g0375031 66.071 56 19 0 15 70 125 180 1.36e-19 82.0
Msa0313000 MtrunA17_Chr1g0183981 62.121 66 24 1 15 79 75 140 1.65e-19 81.6
Msa0313000 MtrunA17_Chr5g0425561 68.421 57 18 0 15 71 173 229 2.45e-19 83.6
Msa0313000 MtrunA17_Chr5g0432821 56.923 65 28 0 11 75 120 184 4.55e-19 82.0
Msa0313000 MtrunA17_Chr1g0184061 60.606 66 25 1 15 79 77 142 6.73e-19 80.1
Msa0313000 MtrunA17_Chr8g0350701 57.143 70 28 1 15 82 27 96 7.51e-19 81.6
Msa0313000 MtrunA17_Chr2g0301191 53.623 69 30 1 15 81 19 87 1.12e-18 79.7
Msa0313000 MtrunA17_Chr7g0275841 61.404 57 22 0 15 71 28 84 1.50e-18 78.2
Msa0313000 MtrunA17_Chr7g0217991 47.059 85 45 0 15 99 42 126 1.61e-18 81.6
Msa0313000 MtrunA17_Chr8g0346741 52.857 70 33 0 2 71 26 95 1.81e-18 78.2
Msa0313000 MtrunA17_Chr5g0437671 59.677 62 25 0 10 71 80 141 2.32e-18 81.3
Msa0313000 MtrunA17_Chr7g0257911 34.014 147 90 3 10 156 26 165 2.48e-18 80.1
Msa0313000 MtrunA17_Chr2g0324131 64.912 57 20 0 15 71 218 274 2.59e-18 80.9
Msa0313000 MtrunA17_Chr1g0196781 61.404 57 22 0 15 71 152 208 2.80e-18 80.1
Msa0313000 MtrunA17_Chr2g0323171 53.030 66 31 0 10 75 60 125 2.99e-18 77.8
Msa0313000 MtrunA17_Chr7g0261151 65.517 58 19 1 15 71 20 77 3.93e-18 76.3
Msa0313000 MtrunA17_Chr1g0189941 55.000 60 27 0 14 73 23 82 4.18e-18 77.0
Msa0313000 MtrunA17_Chr6g0453661 63.333 60 22 0 15 74 38 97 4.39e-18 80.5
Msa0313000 MtrunA17_Chr1g0186671 63.793 58 20 1 15 71 19 76 4.67e-18 76.3
Msa0313000 MtrunA17_Chr2g0333011 63.158 57 21 0 15 71 7 63 5.09e-18 77.0
Msa0313000 MtrunA17_Chr3g0140161 61.404 57 22 0 15 71 43 99 7.65e-18 76.6
Msa0313000 MtrunA17_Chr2g0301171 54.545 66 28 1 15 78 19 84 8.67e-18 77.0
Msa0313000 MtrunA17_Chr4g0023411 51.471 68 33 0 10 77 60 127 9.42e-18 76.6
Msa0313000 MtrunA17_Chr4g0003421 63.158 57 21 0 15 71 40 96 9.96e-18 77.8
Msa0313000 MtrunA17_Chr7g0261101 65.517 58 19 1 15 71 20 77 1.07e-17 75.1
Msa0313000 MtrunA17_Chr4g0017851 54.286 70 30 1 4 71 105 174 1.18e-17 78.2
Msa0313000 MtrunA17_Chr7g0265851 54.286 70 32 0 2 71 11 80 1.41e-17 76.3
Msa0313000 MtrunA17_Chr2g0301181 54.545 66 28 1 15 78 19 84 1.43e-17 77.0
Msa0313000 MtrunA17_Chr6g0461271 62.500 56 21 0 15 70 33 88 1.94e-17 77.8
Msa0313000 MtrunA17_Chr5g0399441 57.895 57 24 0 15 71 28 84 2.21e-17 75.5
Msa0313000 MtrunA17_Chr1g0150661 49.254 67 34 0 15 81 35 101 2.33e-17 76.3
Msa0313000 MtrunA17_Chr8g0340311 59.649 57 23 0 15 71 47 103 2.65e-17 75.9
Msa0313000 MtrunA17_Chr7g0253424 55.556 63 28 0 8 70 32 94 2.81e-17 76.6
Msa0313000 MtrunA17_Chr2g0331231 57.895 57 24 0 15 71 41 97 3.61e-17 75.5
Msa0313000 MtrunA17_Chr8g0334801 53.623 69 30 1 5 71 40 108 3.87e-17 75.5
Msa0313000 MtrunA17_Chr1g0150691 48.529 68 35 0 15 82 22 89 4.16e-17 75.5
Msa0313000 MtrunA17_Chr1g0186681 60.317 63 21 2 13 71 15 77 4.63e-17 73.2
Msa0313000 MtrunA17_Chr1g0150631 48.529 68 35 0 15 82 38 105 5.68e-17 75.5
Msa0313000 MtrunA17_Chr1g0150671 47.826 69 36 0 8 76 39 107 7.25e-17 75.9
Msa0313000 MtrunA17_Chr5g0437371 57.143 63 27 0 10 72 61 123 7.42e-17 76.3
Msa0313000 MtrunA17_Chr4g0055951 57.895 57 24 0 15 71 74 130 7.86e-17 75.5
Msa0313000 MtrunA17_Chr3g0134161 56.667 60 26 0 12 71 42 101 1.14e-16 73.2
Msa0313000 MtrunA17_Chr8g0390091 59.649 57 23 0 15 71 37 93 1.65e-16 74.3
Msa0313000 MtrunA17_Chr7g0261181 61.538 65 24 1 8 71 6 70 1.68e-16 71.6
Msa0313000 MtrunA17_Chr3g0131601 68.852 61 19 0 11 71 72 132 1.77e-16 74.7
Msa0313000 MtrunA17_Chr6g0486701 57.895 57 24 0 15 71 44 100 2.42e-16 73.6
Msa0313000 MtrunA17_Chr3g0136551 46.154 78 38 1 12 89 62 135 3.10e-16 73.9
Msa0313000 MtrunA17_Chr4g0042761 62.500 56 21 0 15 70 48 103 4.50e-16 73.9
Msa0313000 MtrunA17_Chr1g0170471 58.333 60 21 2 22 80 90 146 5.53e-16 71.6
Msa0313000 MtrunA17_Chr1g0183961 67.241 58 18 1 15 71 27 84 7.42e-16 70.5
Msa0313000 MtrunA17_Chr3g0129421 64.286 70 21 1 6 71 157 226 8.04e-16 73.6
Msa0313000 MtrunA17_Chr1g0153151 56.140 57 25 0 15 71 44 100 1.44e-15 70.5
Msa0313000 MtrunA17_Chr1g0203861 62.500 56 21 0 15 70 44 99 2.01e-15 70.9
Msa0313000 MtrunA17_Chr5g0401871 53.333 60 28 0 12 71 22 81 2.42e-15 70.1
Msa0313000 MtrunA17_Chr3g0083501 58.000 50 21 0 22 71 2 51 3.12e-15 67.0
Msa0313000 MtrunA17_Chr7g0232261 56.140 57 25 0 15 71 61 117 4.29e-15 70.5
Msa0313000 MtrunA17_Chr5g0396171 52.727 55 26 0 17 71 26 80 5.44e-15 67.0
Msa0313000 MtrunA17_Chr3g0136541 46.575 73 35 1 17 89 42 110 7.80e-15 69.7
Msa0313000 MtrunA17_Chr1g0186741 57.895 76 30 2 11 85 69 143 9.29e-15 68.9
Msa0313000 MtrunA17_Chr5g0438851 37.654 162 83 4 8 169 11 154 1.08e-14 68.2
Msa0313000 MtrunA17_Chr8g0378811 57.143 56 24 0 15 70 55 110 1.20e-14 69.7
Msa0313000 MtrunA17_Chr1g0167781 51.220 82 36 2 2 79 66 147 1.75e-14 68.6
Msa0313000 MtrunA17_Chr6g0473971 56.667 60 26 0 11 70 50 109 2.29e-14 68.6
Msa0313000 MtrunA17_Chr5g0396191 63.158 57 21 0 15 71 11 67 2.75e-14 67.4
Msa0313000 MtrunA17_Chr7g0225131 52.459 61 26 1 15 75 29 86 3.12e-14 65.1
Msa0313000 MtrunA17_Chr1g0183931 62.121 66 24 1 15 79 101 166 3.21e-14 68.2
Msa0313000 MtrunA17_Chr1g0205961 47.436 78 37 1 15 88 115 192 5.46e-14 68.6
Msa0313000 MtrunA17_Chr7g0261201 62.121 66 24 1 15 79 98 163 7.26e-14 67.0
Msa0313000 MtrunA17_Chr7g0243431 48.529 68 28 1 10 70 73 140 8.85e-14 68.2
Msa0313000 MtrunA17_Chr6g0473941 58.929 56 23 0 15 70 33 88 1.22e-13 65.9
Msa0313000 MtrunA17_Chr8g0345531 59.091 44 18 0 13 56 114 157 1.39e-13 67.4
Msa0313000 MtrunA17_Chr6g0473931 58.929 56 23 0 15 70 33 88 1.93e-13 65.5
Msa0313000 MtrunA17_Chr4g0040411 37.838 111 36 2 4 105 17 103 2.01e-13 65.1
Msa0313000 MtrunA17_Chr6g0473881 57.143 56 24 0 15 70 110 165 2.44e-13 66.2
Msa0313000 MtrunA17_Chr4g0057241 54.930 71 31 1 1 71 1 70 2.54e-13 64.3
Msa0313000 MtrunA17_Chr4g0002771 71.186 59 17 0 12 70 74 132 3.07e-13 65.1
Msa0313000 MtrunA17_Chr6g0474001 57.143 56 24 0 15 70 54 109 3.09e-13 65.9
Msa0313000 MtrunA17_Chr6g0473741 55.357 56 25 0 15 70 66 121 4.88e-13 64.7
Msa0313000 MtrunA17_Chr6g0473781 57.143 56 24 0 15 70 57 112 5.26e-13 64.7
Msa0313000 MtrunA17_Chr6g0461941 62.857 70 25 1 3 71 7 76 6.96e-13 63.9
Msa0313000 MtrunA17_Chr6g0473961 57.143 56 24 0 15 70 54 109 7.35e-13 63.9
Msa0313000 MtrunA17_Chr6g0473861 50.820 61 30 0 15 75 63 123 9.24e-13 64.7
Msa0313000 MtrunA17_Chr5g0396181 57.895 57 24 0 15 71 21 77 1.43e-12 62.8
Msa0313000 MtrunA17_Chr1g0149331 61.404 57 22 0 15 71 7 63 1.95e-12 62.8
Msa0313000 MtrunA17_Chr5g0423811 67.500 40 13 0 15 54 88 127 2.19e-12 63.5
Msa0313000 MtrunA17_Chr8g0345551 61.905 42 16 0 15 56 117 158 2.22e-12 63.9
Msa0313000 MtrunA17_Chr1g0155751 58.065 62 26 0 10 71 34 95 3.36e-12 62.8
Msa0313000 MtrunA17_Chr6g0473981 55.357 56 25 0 15 70 54 109 3.56e-12 62.8
Msa0313000 MtrunA17_Chr3g0108241 56.250 64 27 1 9 71 109 172 4.54e-12 62.4
Msa0313000 MtrunA17_Chr7g0261171 59.091 66 26 1 15 79 85 150 4.71e-12 62.0
Msa0313000 MtrunA17_Chr3g0137831 57.143 63 27 0 15 77 8 70 6.81e-12 61.2
Msa0313000 MtrunA17_Chr6g0473771 50.000 56 28 0 15 70 43 98 8.40e-12 59.3
Msa0313000 MtrunA17_Chr6g0486711 57.895 57 24 0 15 71 49 105 8.64e-12 61.2
Msa0313000 MtrunA17_Chr1g0209891 56.818 44 19 0 13 56 52 95 1.30e-11 61.6
Msa0313000 MtrunA17_Chr5g0396301 42.029 69 36 2 15 81 18 84 1.34e-11 59.7
Msa0313000 MtrunA17_Chr1g0146191 50.000 74 31 1 9 76 41 114 1.82e-11 60.8
Msa0313000 MtrunA17_Chr5g0422501 39.773 88 44 2 15 102 107 185 1.98e-11 61.2
Msa0313000 MtrunA17_Chr2g0321071 49.180 61 29 2 15 73 47 107 3.00e-11 59.7
Msa0313000 MtrunA17_Chr6g0473791 56.000 50 22 0 15 64 57 106 5.77e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0313000 AT1G28360.1 46.305 203 59 5 5 172 2 189 2.22e-43 142
Msa0313000 AT5G44210.1 73.913 69 18 0 3 71 21 89 1.07e-30 110
Msa0313000 AT3G15210.1 76.812 69 16 0 3 71 13 81 2.53e-30 110
Msa0313000 AT1G28370.2 73.239 71 11 1 15 85 58 120 9.07e-30 108
Msa0313000 AT1G28370.1 72.222 72 12 1 14 85 19 82 2.03e-29 106
Msa0313000 AT1G50640.1 80.328 61 12 0 11 71 24 84 2.01e-28 105
Msa0313000 AT3G20310.1 77.049 61 14 0 11 71 23 83 5.51e-26 99.8
Msa0313000 AT2G33710.1 71.875 64 18 0 8 71 63 126 2.21e-25 97.4
Msa0313000 AT2G33710.2 71.875 64 18 0 8 71 63 126 2.66e-25 97.8
Msa0313000 AT1G03800.1 64.789 71 25 0 1 71 39 109 2.88e-25 97.8
Msa0313000 AT1G12980.1 78.571 56 12 0 15 70 57 112 7.35e-25 98.6
Msa0313000 AT1G24590.1 78.571 56 12 0 15 70 58 113 1.04e-24 97.8
Msa0313000 AT1G12890.1 71.667 60 17 0 11 70 17 76 2.16e-24 95.1
Msa0313000 AT5G13330.1 72.131 61 17 0 11 71 35 95 2.29e-24 94.7
Msa0313000 AT5G13910.1 76.786 56 13 0 15 70 20 75 3.33e-24 94.4
Msa0313000 AT3G16770.1 70.492 61 18 0 11 71 75 135 4.78e-24 94.7
Msa0313000 AT5G61890.1 70.492 61 18 0 11 71 86 146 9.59e-24 94.0
Msa0313000 AT1G72360.1 60.563 71 28 0 1 71 11 81 1.16e-23 92.8
Msa0313000 AT4G11140.1 68.852 61 19 0 15 75 87 147 1.45e-23 94.4
Msa0313000 AT1G72360.3 62.857 70 26 0 2 71 61 130 1.93e-23 93.6
Msa0313000 AT5G51190.1 71.429 63 17 1 10 71 67 129 2.41e-23 92.4
Msa0313000 AT1G28160.1 73.333 60 16 0 11 70 35 94 2.74e-23 92.8
Msa0313000 AT5G18560.1 68.254 63 20 0 13 75 53 115 6.61e-23 93.6
Msa0313000 AT1G72360.2 62.319 69 26 0 3 71 64 132 7.82e-23 92.0
Msa0313000 AT2G44840.1 63.380 71 25 1 2 71 79 149 1.07e-22 90.9
Msa0313000 AT5G47220.1 64.179 67 23 1 6 71 108 174 1.98e-22 90.5
Msa0313000 AT2G47520.1 64.615 65 23 0 11 75 46 110 2.61e-22 88.2
Msa0313000 AT4G23750.2 55.405 74 33 0 4 77 111 184 2.62e-22 91.7
Msa0313000 AT4G23750.1 55.405 74 33 0 4 77 111 184 2.62e-22 91.7
Msa0313000 AT3G61630.1 47.059 119 48 4 1 115 91 198 3.83e-22 90.9
Msa0313000 AT4G17500.1 62.319 69 25 1 4 71 137 205 1.01e-21 89.0
Msa0313000 AT3G23240.1 57.143 77 32 1 5 80 72 148 1.29e-21 87.8
Msa0313000 AT5G47230.1 67.692 65 20 1 8 71 149 213 1.37e-21 89.4
Msa0313000 AT5G43410.1 70.492 61 17 1 12 71 12 72 1.89e-21 85.1
Msa0313000 AT1G53170.1 78.125 64 14 0 7 70 23 86 2.36e-21 86.3
Msa0313000 AT1G22190.1 60.563 71 28 0 1 71 69 139 4.70e-21 87.0
Msa0313000 AT5G61600.1 71.186 59 16 1 14 71 87 145 5.07e-21 86.7
Msa0313000 AT2G46310.1 60.294 68 24 1 15 79 99 166 5.60e-21 87.4
Msa0313000 AT5G65130.1 43.089 123 55 4 15 127 111 228 5.68e-21 87.0
Msa0313000 AT5G65130.2 43.089 123 55 4 15 127 113 230 6.03e-21 87.0
Msa0313000 AT4G27950.1 59.701 67 27 0 8 74 111 177 6.18e-21 87.8
Msa0313000 AT4G18450.1 55.952 84 33 3 3 84 100 181 1.41e-20 86.7
Msa0313000 AT5G07580.1 67.797 59 18 1 14 71 109 167 1.46e-20 84.7
Msa0313000 AT5G25390.2 45.714 105 48 2 15 119 7 102 2.01e-20 84.0
Msa0313000 AT4G39780.1 56.164 73 27 1 15 82 93 165 4.29e-20 84.7
Msa0313000 AT4G17490.1 64.615 65 22 1 8 71 130 194 4.65e-20 84.7
Msa0313000 AT2G31230.1 59.155 71 28 1 10 79 81 151 4.89e-20 84.0
Msa0313000 AT2G22200.1 56.338 71 31 0 1 71 57 127 6.29e-20 84.3
Msa0313000 AT1G19210.1 50.649 77 36 1 7 81 4 80 1.59e-19 81.6
Msa0313000 AT5G53290.1 66.071 56 19 0 15 70 125 180 1.71e-19 84.3
Msa0313000 AT1G36060.1 68.421 57 18 0 15 71 143 199 2.13e-19 83.6
Msa0313000 AT1G78080.1 68.421 57 18 0 15 71 152 208 2.31e-19 83.6
Msa0313000 AT4G28140.1 50.000 90 44 1 15 104 143 231 2.97e-19 82.8
Msa0313000 AT5G25190.1 59.677 62 25 0 15 76 8 69 3.03e-19 80.5
Msa0313000 AT2G20880.1 55.405 74 25 1 15 80 187 260 3.09e-19 83.2
Msa0313000 AT1G71450.1 61.404 57 22 0 15 71 24 80 7.15e-19 79.7
Msa0313000 AT3G23230.1 60.317 63 24 1 10 71 15 77 7.80e-19 78.6
Msa0313000 AT1G01250.1 56.716 67 29 0 5 71 35 101 9.58e-19 79.7
Msa0313000 AT1G15360.1 63.158 57 21 0 15 71 7 63 4.92e-18 77.8
Msa0313000 AT1G15360.2 63.158 57 21 0 15 71 7 63 4.92e-18 77.8
Msa0313000 AT5G25810.1 63.158 57 21 0 15 71 36 92 8.90e-18 77.8
Msa0313000 AT1G75490.1 56.250 64 28 0 10 73 37 100 8.93e-18 77.4
Msa0313000 AT1G74930.1 52.381 63 30 0 12 74 18 80 1.48e-17 76.6
Msa0313000 AT1G43160.1 67.164 67 22 0 5 71 51 117 1.58e-17 76.3
Msa0313000 AT5G25390.1 43.810 105 47 3 15 119 7 99 1.75e-17 76.3
Msa0313000 AT4G32800.1 50.667 75 33 1 1 71 1 75 1.87e-17 76.6
Msa0313000 AT5G07310.1 70.492 61 18 0 11 71 88 148 1.88e-17 77.4
Msa0313000 AT4G16750.1 53.226 62 29 0 10 71 35 96 5.45e-17 74.7
Msa0313000 AT3G57600.1 40.833 120 61 4 14 133 27 136 6.80e-17 76.3
Msa0313000 AT5G11590.1 61.404 57 22 0 15 71 51 107 8.92e-17 75.5
Msa0313000 AT4G36900.1 48.529 68 35 0 4 71 19 86 9.00e-17 74.3
Msa0313000 AT5G64750.1 70.588 51 15 0 21 71 191 241 2.63e-16 75.5
Msa0313000 AT5G18450.1 58.929 56 23 0 15 70 34 89 2.80e-16 75.1
Msa0313000 AT2G36450.1 50.000 72 35 1 1 71 1 72 2.89e-16 72.8
Msa0313000 AT2G25820.1 57.627 59 25 0 13 71 24 82 2.99e-16 73.6
Msa0313000 AT2G35700.1 51.613 62 30 0 10 71 40 101 3.25e-16 73.2
Msa0313000 AT3G50260.1 53.226 62 29 0 10 71 16 77 4.27e-16 71.6
Msa0313000 AT2G23340.1 56.140 57 25 0 15 71 28 84 6.23e-16 72.0
Msa0313000 AT1G22985.1 53.425 73 30 2 1 70 62 133 6.27e-16 71.2
Msa0313000 AT4G34410.1 70.175 57 17 0 15 71 136 192 6.81e-16 73.6
Msa0313000 AT4G31060.1 56.140 57 25 0 15 71 27 83 7.02e-16 72.0
Msa0313000 AT3G16280.1 57.895 57 24 0 15 71 61 117 8.67e-16 72.8
Msa0313000 AT1G04370.1 64.179 67 23 1 12 77 17 83 8.89e-16 70.5
Msa0313000 AT3G16280.2 57.895 57 24 0 15 71 79 135 1.01e-15 72.8
Msa0313000 AT5G19790.1 58.929 56 23 0 15 70 22 77 1.04e-15 72.8
Msa0313000 AT5G67190.1 56.140 57 25 0 15 71 21 77 1.08e-15 71.2
Msa0313000 AT5G21960.1 52.174 69 31 1 15 81 7 75 1.51e-15 71.6
Msa0313000 AT1G21910.1 47.826 69 36 0 15 83 50 118 2.03e-15 71.6
Msa0313000 AT4G06746.1 51.667 60 29 0 12 71 33 92 2.24e-15 69.7
Msa0313000 AT5G50080.2 71.930 57 16 0 15 71 86 142 2.49e-15 71.2
Msa0313000 AT1G71130.1 54.412 68 26 1 8 70 72 139 2.50e-15 70.1
Msa0313000 AT3G11020.1 53.125 64 30 0 10 73 73 136 2.54e-15 72.4
Msa0313000 AT2G40340.2 55.172 58 26 0 15 72 14 71 2.88e-15 72.0
Msa0313000 AT2G40340.5 55.172 58 26 0 15 72 14 71 2.88e-15 72.0
Msa0313000 AT2G40340.4 55.172 58 26 0 15 72 14 71 2.88e-15 72.0
Msa0313000 AT5G50080.1 71.930 57 16 0 15 71 77 133 2.96e-15 70.9
Msa0313000 AT2G44940.1 48.649 74 36 1 6 79 91 162 2.97e-15 72.0
Msa0313000 AT2G40350.2 48.387 62 32 0 15 76 74 135 3.39e-15 69.7
Msa0313000 AT2G40350.1 48.387 62 32 0 15 76 67 128 3.54e-15 69.3
Msa0313000 AT3G14230.3 66.667 66 22 0 6 71 114 179 5.21e-15 72.0
Msa0313000 AT3G14230.2 66.667 66 22 0 6 71 115 180 5.28e-15 72.0
Msa0313000 AT3G14230.1 66.667 66 22 0 6 71 119 184 5.84e-15 71.6
Msa0313000 AT1G46768.3 54.386 57 26 0 15 71 31 87 6.54e-15 68.2
Msa0313000 AT5G05410.2 53.226 62 29 0 10 71 74 135 6.89e-15 71.2
Msa0313000 AT1G46768.1 54.386 57 26 0 15 71 31 87 7.02e-15 68.6
Msa0313000 AT1G46768.2 54.386 57 26 0 15 71 31 87 7.02e-15 68.6
Msa0313000 AT2G40340.3 56.140 57 25 0 15 71 72 128 7.37e-15 70.9
Msa0313000 AT2G40340.1 56.140 57 25 0 15 71 72 128 8.05e-15 71.2
Msa0313000 AT2G40340.6 56.140 57 25 0 15 71 79 135 8.09e-15 71.2
Msa0313000 AT1G06160.1 65.152 66 22 1 15 79 82 147 8.45e-15 70.1
Msa0313000 AT5G05410.1 53.226 62 29 0 10 71 74 135 8.77e-15 70.9
Msa0313000 AT5G61590.1 67.797 59 18 1 14 71 106 164 1.55e-14 68.6
Msa0313000 AT4G25480.1 55.932 59 26 0 15 73 51 109 1.62e-14 68.9
Msa0313000 AT1G68550.1 77.500 40 9 0 17 56 115 154 1.93e-14 70.1
Msa0313000 AT1G68550.2 77.500 40 9 0 17 56 115 154 1.93e-14 70.1
Msa0313000 AT4G25490.1 58.929 56 23 0 15 70 48 103 2.70e-14 68.2
Msa0313000 AT4G25470.1 58.929 56 23 0 15 70 51 106 2.82e-14 68.2
Msa0313000 AT3G60490.1 54.386 57 26 0 15 71 71 127 2.96e-14 68.9
Msa0313000 AT1G53910.3 67.213 61 20 0 11 71 119 179 6.77e-14 68.6
Msa0313000 AT1G53910.1 67.213 61 20 0 11 71 121 181 7.09e-14 68.6
Msa0313000 AT1G53910.2 67.213 61 20 0 11 71 121 181 7.09e-14 68.6
Msa0313000 AT3G23220.1 65.574 61 20 1 12 71 11 71 1.06e-13 65.1
Msa0313000 AT4G13620.1 36.232 138 66 3 15 146 232 353 1.26e-13 68.2
Msa0313000 AT1G49120.1 59.574 47 19 0 15 61 87 133 2.10e-13 67.0
Msa0313000 AT5G67000.1 54.237 59 27 0 11 69 117 175 3.41e-13 64.7
Msa0313000 AT5G51990.1 57.143 56 24 0 15 70 54 109 4.55e-13 65.1
Msa0313000 AT1G77200.1 59.649 57 23 0 15 71 43 99 6.80e-13 65.1
Msa0313000 AT5G11190.1 52.703 74 33 1 15 86 7 80 7.11e-13 63.9
Msa0313000 AT1G80580.1 66.154 65 22 0 11 75 112 176 4.08e-12 62.8
Msa0313000 AT1G33760.1 57.895 57 24 0 15 71 20 76 2.98e-11 59.7
Msa0313000 AT2G40220.1 57.143 63 27 0 10 72 50 112 3.96e-11 60.8
Msa0313000 AT1G77640.1 43.590 78 44 0 7 84 35 112 7.68e-11 59.3

Find 64 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCGACGGCGGCTTACT+TGG 0.282097 2_4:-8272687 Msa0313000:CDS
TAAGCAAGAGCAGCTTCTTC+TGG 0.305990 2_4:+8272986 None:intergenic
GGCTTCTTCTTCAACTTCTT+CGG 0.352107 2_4:-8273122 Msa0313000:CDS
CTCACTGAGTTTCTTCAAAC+TGG 0.356974 2_4:-8272821 Msa0313000:CDS
CGCTGTCGCCGGCAGAACTA+TGG 0.357693 2_4:-8272720 Msa0313000:CDS
CTCCACCTCCACCCATCGGC+GGG 0.366278 2_4:-8272775 Msa0313000:CDS
CCGCCGATGGGTGGAGGTGG+AGG 0.390820 2_4:+8272776 None:intergenic
CCGATGGGTGGAGGTGGAGG+AGG 0.396797 2_4:+8272779 None:intergenic
AGTCCTCCGGCGACCGGCGC+CGG 0.410715 2_4:+8272911 None:intergenic
TTTCCACCGGCGCCGGTCGC+CGG 0.411851 2_4:-8272917 Msa0313000:CDS
CTGTCCAACCACCCCGCCGA+TGG 0.439839 2_4:+8272763 None:intergenic
CATGGAAGAAGACACGAGTT+TGG 0.440857 2_4:-8273027 Msa0313000:CDS
GGTCGCCGGAGGACTTTGCT+TGG 0.442471 2_4:-8272903 Msa0313000:CDS
ACCCCGCCGATGGGTGGAGG+TGG 0.453855 2_4:+8272773 None:intergenic
CCACCCATCGGCGGGGTGGT+TGG 0.456826 2_4:-8272767 Msa0313000:CDS
ACCACCCCGCCGATGGGTGG+AGG 0.462511 2_4:+8272770 None:intergenic
CAAACTCGTGTCTTCTTCCA+TGG 0.475352 2_4:+8273028 None:intergenic
TCTCCGACGGCGGCTTACTT+GGG 0.475757 2_4:-8272686 Msa0313000:CDS
TGTCCAACCACCCCGCCGAT+GGG 0.479672 2_4:+8272764 None:intergenic
GACCGGCGCCGGTGGAAAGT+TGG 0.483738 2_4:+8272922 None:intergenic
CTCAGCCACCATAGTTCTGC+CGG 0.493975 2_4:+8272712 None:intergenic
AAGCAAAGTCCTCCGGCGAC+CGG 0.494542 2_4:+8272905 None:intergenic
GGAGGTTCATTCAAGTCAAT+CGG 0.498712 2_4:+8272644 None:intergenic
CCTCCGGCGACCGGCGCCGG+TGG 0.500027 2_4:+8272914 None:intergenic
GAAGAAGACACGAGTTTGGT+TGG 0.503288 2_4:-8273023 Msa0313000:CDS
GAAGTTACACTCGCTGTCGC+CGG 0.504529 2_4:-8272731 Msa0313000:CDS
TCTTCAAACTGGTGTTCTCA+AGG 0.509919 2_4:-8272810 Msa0313000:CDS
GGCTGAGAACTCTCCGACGG+CGG 0.527829 2_4:-8272696 Msa0313000:CDS
AAGAAGACACGAGTTTGGTT+GGG 0.528467 2_4:-8273022 Msa0313000:CDS
CCACCGGCGCCGGTCGCCGG+AGG 0.529093 2_4:-8272914 Msa0313000:CDS
CCAACCACCCCGCCGATGGG+TGG 0.529894 2_4:+8272767 None:intergenic
CCGCTGAGATTCGTGATCCA+TGG 0.530373 2_4:-8273045 Msa0313000:CDS
CCTCCACCTCCACCCATCGG+CGG 0.531243 2_4:-8272776 Msa0313000:CDS
AACCAACTTTCCACCGGCGC+CGG 0.532599 2_4:-8272924 Msa0313000:CDS
CGATGGGTGGAGGTGGAGGA+GGG 0.533756 2_4:+8272780 None:intergenic
CTCCTTCTTCTGATCTCCGA+TGG 0.535940 2_4:-8272871 Msa0313000:CDS
TTTCAAAGCCACAACGGTGG+AGG 0.546587 2_4:+8272626 None:intergenic
ACTTCTTCGGCGAATCGTGA+AGG 0.551686 2_4:-8273109 Msa0313000:CDS
GTGAGCACACGGCCACGTGA+AGG 0.555659 2_4:+8272839 None:intergenic
GGCCATCGGAGATCAGAAGA+AGG 0.567898 2_4:+8272869 None:intergenic
GAGATCCAAGCAAAGTCCTC+CGG 0.573243 2_4:+8272898 None:intergenic
ACCTCCACCCATCGGCGGGG+TGG 0.575330 2_4:-8272771 Msa0313000:CDS
AGGTGTTAGAAAGCGACCAT+GGG 0.577193 2_4:-8273077 Msa0313000:CDS
TGAGCACACGGCCACGTGAA+GGG 0.577758 2_4:+8272840 None:intergenic
TGAATGAACCTCCACCGTTG+TGG 0.585032 2_4:-8272634 Msa0313000:CDS
GAGGTGTTAGAAAGCGACCA+TGG 0.585261 2_4:-8273078 Msa0313000:CDS
TCCACCTCCACCCATCGGCG+GGG 0.586096 2_4:-8272774 Msa0313000:CDS
TCGGCGGGGTGGTTGGACAG+AGG 0.590268 2_4:-8272760 Msa0313000:CDS
CGGCCACGTGAAGGGACAGA+AGG 0.591005 2_4:+8272848 None:intergenic
GGCGCTGCTCGTTCTCTCCG+TGG 0.596368 2_4:-8272959 Msa0313000:CDS
TGTCGCCGGCAGAACTATGG+TGG 0.600645 2_4:-8272717 Msa0313000:CDS
TGGCCTTCTGTCCCTTCACG+TGG 0.605659 2_4:-8272851 Msa0313000:CDS
TCAGCGGCGTAGCGTCCCCA+TGG 0.607546 2_4:+8273061 None:intergenic
TACTTGGGACTAGTTCGACG+TGG 0.616320 2_4:-8272671 Msa0313000:CDS
ACTTGGGACTAGTTCGACGT+GGG 0.618072 2_4:-8272670 Msa0313000:CDS
CCTCCTCCACCTCCACCCAT+CGG 0.621940 2_4:-8272779 Msa0313000:CDS
GTGAAGGGACAGAAGGCCAT+CGG 0.628720 2_4:+8272855 None:intergenic
GAAGAAACTCAGTGAGCACA+CGG 0.642871 2_4:+8272828 None:intergenic
AGTCCCAAGTAAGCCGCCGT+CGG 0.659428 2_4:+8272683 None:intergenic
GGTGGCTGAGAACTCTCCGA+CGG 0.700228 2_4:-8272699 Msa0313000:CDS
GGTGTTAGAAAGCGACCATG+GGG 0.702879 2_4:-8273076 Msa0313000:CDS
GAAGCTGCTCTTGCTTACGA+CGG 0.704068 2_4:-8272980 Msa0313000:CDS
AATCGTGAAGGACACTACAG+AGG 0.714685 2_4:-8273097 Msa0313000:CDS
CCATGGATCACGAATCTCAG+CGG 0.721133 2_4:+8273045 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
GGCTTCTTCTTCAACTTCTT+CGG - chr2_4:8272630-8272649 Msa0313000:CDS 40.0%
AAGAAGACACGAGTTTGGTT+GGG - chr2_4:8272730-8272749 Msa0313000:CDS 40.0%
!! TGGTTTTTGCTTTTGCTCCA+CGG + chr2_4:8272813-8272832 None:intergenic 40.0%
AGCAAAAACCAACTTTCCAC+CGG - chr2_4:8272822-8272841 Msa0313000:CDS 40.0%
CTCACTGAGTTTCTTCAAAC+TGG - chr2_4:8272931-8272950 Msa0313000:CDS 40.0%
TCTTCAAACTGGTGTTCTCA+AGG - chr2_4:8272942-8272961 Msa0313000:CDS 40.0%
GGAGGTTCATTCAAGTCAAT+CGG + chr2_4:8273111-8273130 None:intergenic 40.0%
AATCGTGAAGGACACTACAG+AGG - chr2_4:8272655-8272674 Msa0313000:CDS 45.0%
AGGTGTTAGAAAGCGACCAT+GGG - chr2_4:8272675-8272694 Msa0313000:CDS 45.0%
CAAACTCGTGTCTTCTTCCA+TGG + chr2_4:8272727-8272746 None:intergenic 45.0%
CATGGAAGAAGACACGAGTT+TGG - chr2_4:8272725-8272744 Msa0313000:CDS 45.0%
GAAGAAGACACGAGTTTGGT+TGG - chr2_4:8272729-8272748 Msa0313000:CDS 45.0%
TAAGCAAGAGCAGCTTCTTC+TGG + chr2_4:8272769-8272788 None:intergenic 45.0%
GAAGAAACTCAGTGAGCACA+CGG + chr2_4:8272927-8272946 None:intergenic 45.0%
ACTTCTTCGGCGAATCGTGA+AGG - chr2_4:8272643-8272662 Msa0313000:CDS 50.0%
! GAGGTGTTAGAAAGCGACCA+TGG - chr2_4:8272674-8272693 Msa0313000:CDS 50.0%
GGTGTTAGAAAGCGACCATG+GGG - chr2_4:8272676-8272695 Msa0313000:CDS 50.0%
CCATGGATCACGAATCTCAG+CGG + chr2_4:8272710-8272729 None:intergenic 50.0%
GAAGCTGCTCTTGCTTACGA+CGG - chr2_4:8272772-8272791 Msa0313000:CDS 50.0%
GAGATCCAAGCAAAGTCCTC+CGG + chr2_4:8272857-8272876 None:intergenic 50.0%
CTCCTTCTTCTGATCTCCGA+TGG - chr2_4:8272881-8272900 Msa0313000:CDS 50.0%
!! TACTTGGGACTAGTTCGACG+TGG - chr2_4:8273081-8273100 Msa0313000:CDS 50.0%
!! ACTTGGGACTAGTTCGACGT+GGG - chr2_4:8273082-8273101 Msa0313000:CDS 50.0%
TGAATGAACCTCCACCGTTG+TGG - chr2_4:8273118-8273137 Msa0313000:CDS 50.0%
CCGCTGAGATTCGTGATCCA+TGG - chr2_4:8272707-8272726 Msa0313000:CDS 55.0%
GGCCATCGGAGATCAGAAGA+AGG + chr2_4:8272886-8272905 None:intergenic 55.0%
GTGAAGGGACAGAAGGCCAT+CGG + chr2_4:8272900-8272919 None:intergenic 55.0%
GAAGTTACACTCGCTGTCGC+CGG - chr2_4:8273021-8273040 Msa0313000:CDS 55.0%
! CTCAGCCACCATAGTTCTGC+CGG + chr2_4:8273043-8273062 None:intergenic 55.0%
AACCAACTTTCCACCGGCGC+CGG - chr2_4:8272828-8272847 Msa0313000:CDS 60.0%
AAGCAAAGTCCTCCGGCGAC+CGG + chr2_4:8272850-8272869 None:intergenic 60.0%
TGGCCTTCTGTCCCTTCACG+TGG - chr2_4:8272901-8272920 Msa0313000:CDS 60.0%
TGAGCACACGGCCACGTGAA+GGG + chr2_4:8272915-8272934 None:intergenic 60.0%
TGTCGCCGGCAGAACTATGG+TGG - chr2_4:8273035-8273054 Msa0313000:CDS 60.0%
GGTGGCTGAGAACTCTCCGA+CGG - chr2_4:8273053-8273072 Msa0313000:CDS 60.0%
TCTCCGACGGCGGCTTACTT+GGG - chr2_4:8273066-8273085 Msa0313000:CDS 60.0%
AGTCCCAAGTAAGCCGCCGT+CGG + chr2_4:8273072-8273091 None:intergenic 60.0%
GGTCGCCGGAGGACTTTGCT+TGG - chr2_4:8272849-8272868 Msa0313000:CDS 65.0%
CGGCCACGTGAAGGGACAGA+AGG + chr2_4:8272907-8272926 None:intergenic 65.0%
GTGAGCACACGGCCACGTGA+AGG + chr2_4:8272916-8272935 None:intergenic 65.0%
CGATGGGTGGAGGTGGAGGA+GGG + chr2_4:8272975-8272994 None:intergenic 65.0%
CCTCCTCCACCTCCACCCAT+CGG - chr2_4:8272973-8272992 Msa0313000:CDS 65.0%
TGTCCAACCACCCCGCCGAT+GGG + chr2_4:8272991-8273010 None:intergenic 65.0%
CGCTGTCGCCGGCAGAACTA+TGG - chr2_4:8273032-8273051 Msa0313000:CDS 65.0%
GGCTGAGAACTCTCCGACGG+CGG - chr2_4:8273056-8273075 Msa0313000:CDS 65.0%
CTCTCCGACGGCGGCTTACT+TGG - chr2_4:8273065-8273084 Msa0313000:CDS 65.0%
TCAGCGGCGTAGCGTCCCCA+TGG + chr2_4:8272694-8272713 None:intergenic 70.0%
GGCGCTGCTCGTTCTCTCCG+TGG - chr2_4:8272793-8272812 Msa0313000:CDS 70.0%
!! GACCGGCGCCGGTGGAAAGT+TGG + chr2_4:8272833-8272852 None:intergenic 70.0%
CCGATGGGTGGAGGTGGAGG+AGG + chr2_4:8272976-8272995 None:intergenic 70.0%
CCTCCACCTCCACCCATCGG+CGG - chr2_4:8272976-8272995 Msa0313000:CDS 70.0%
CTCCACCTCCACCCATCGGC+GGG - chr2_4:8272977-8272996 Msa0313000:CDS 70.0%
TCCACCTCCACCCATCGGCG+GGG - chr2_4:8272978-8272997 Msa0313000:CDS 70.0%
CTGTCCAACCACCCCGCCGA+TGG + chr2_4:8272992-8273011 None:intergenic 70.0%
TCGGCGGGGTGGTTGGACAG+AGG - chr2_4:8272992-8273011 Msa0313000:CDS 70.0%
!! TTTCCACCGGCGCCGGTCGC+CGG - chr2_4:8272835-8272854 Msa0313000:CDS 75.0%
CCGCCGATGGGTGGAGGTGG+AGG + chr2_4:8272979-8272998 None:intergenic 75.0%
ACCCCGCCGATGGGTGGAGG+TGG + chr2_4:8272982-8273001 None:intergenic 75.0%
ACCTCCACCCATCGGCGGGG+TGG - chr2_4:8272981-8273000 Msa0313000:CDS 75.0%
ACCACCCCGCCGATGGGTGG+AGG + chr2_4:8272985-8273004 None:intergenic 75.0%
CCAACCACCCCGCCGATGGG+TGG + chr2_4:8272988-8273007 None:intergenic 75.0%
CCACCCATCGGCGGGGTGGT+TGG - chr2_4:8272985-8273004 Msa0313000:CDS 75.0%
! AGTCCTCCGGCGACCGGCGC+CGG + chr2_4:8272844-8272863 None:intergenic 80.0%
!! CCTCCGGCGACCGGCGCCGG+TGG + chr2_4:8272841-8272860 None:intergenic 90.0%
!!! CCACCGGCGCCGGTCGCCGG+AGG - chr2_4:8272838-8272857 Msa0313000:CDS 90.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 8272628 8273146 8272628 ID=Msa0313000;Name=Msa0313000
chr2_4 mRNA 8272628 8273146 8272628 ID=Msa0313000-mRNA-1;Parent=Msa0313000;Name=Msa0313000-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|172
chr2_4 exon 8272628 8273146 8272628 ID=Msa0313000-mRNA-1:exon:3176;Parent=Msa0313000-mRNA-1
chr2_4 CDS 8272628 8273146 8272628 ID=Msa0313000-mRNA-1:cds;Parent=Msa0313000-mRNA-1
Gene Sequence

>Msa0313000

ATGGCTTCTTCTTCAACTTCTTCGGCGAATCGTGAAGGACACTACAGAGGTGTTAGAAAGCGACCATGGGGACGCTACGCCGCTGAGATTCGTGATCCATGGAAGAAGACACGAGTTTGGTTGGGTACATTTGACACTCCAGAAGAAGCTGCTCTTGCTTACGACGGCGCTGCTCGTTCTCTCCGTGGAGCAAAAGCAAAAACCAACTTTCCACCGGCGCCGGTCGCCGGAGGACTTTGCTTGGATCTCAACGCTCCTTCTTCTGATCTCCGATGGCCTTCTGTCCCTTCACGTGGCCGTGTGCTCACTGAGTTTCTTCAAACTGGTGTTCTCAAGGATTTCAACCCTCCTCCACCTCCACCCATCGGCGGGGTGGTTGGACAGAGGCATAATGAAGTTACACTCGCTGTCGCCGGCAGAACTATGGTGGCTGAGAACTCTCCGACGGCGGCTTACTTGGGACTAGTTCGACGTGGGATTCCGATTGACTTGAATGAACCTCCACCGTTGTGGCTTTGA
Protein sequence

>Msa0313000

MASSSTSSANREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPAPVAGGLCLDLNAPSSDLRWPSVPSRGRVLTEFLQTGVLKDFNPPPPPPIGGVVGQRHNEVTLAVAGRTMVAENSPTAAYLGLVRRGIPIDLNEPPPLWL*