AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1085680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085680 MtrunA17_Chr8g0391391 98.583 494 7 0 22 515 1 494 0.0 1009
Msa1085680 MtrunA17_Chr3g0145261 61.814 474 174 5 44 514 18 487 0.0 600
Msa1085680 MtrunA17_Chr1g0195271 62.581 465 171 2 48 512 36 497 0.0 589
Msa1085680 MtrunA17_Chr4g0018301 59.052 464 182 4 51 514 45 500 0.0 564
Msa1085680 MtrunA17_Chr3g0119821 58.065 465 193 2 50 514 34 496 0.0 551
Msa1085680 MtrunA17_Chr4g0018361 58.130 492 187 8 35 515 10 493 0.0 546
Msa1085680 MtrunA17_Chr3g0080171 55.484 465 200 4 51 514 25 483 2.12e-179 513
Msa1085680 MtrunA17_Chr8g0388051 49.895 475 225 8 47 513 24 493 4.80e-159 466
Msa1085680 MtrunA17_Chr5g0397201 50.000 468 216 9 47 509 36 490 6.16e-157 456
Msa1085680 MtrunA17_Chr3g0119371 47.047 508 252 9 17 511 2 505 3.17e-155 452
Msa1085680 MtrunA17_Chr5g0439311 45.679 486 251 8 35 511 15 496 3.81e-150 439
Msa1085680 MtrunA17_Chr4g0038131 49.574 470 223 9 49 509 26 490 2.24e-145 431
Msa1085680 MtrunA17_Chr1g0164201 47.984 496 234 10 26 512 2 482 8.40e-142 417
Msa1085680 MtrunA17_Chr3g0086311 44.398 482 247 10 35 509 10 477 6.64e-136 402
Msa1085680 MtrunA17_Chr5g0397181 45.409 403 202 9 112 509 1 390 3.33e-121 361
Msa1085680 MtrunA17_Chr3g0142501 41.336 479 250 10 47 509 53 516 8.68e-112 342
Msa1085680 MtrunA17_Chr4g0018341 56.690 284 117 3 231 514 2 279 9.86e-111 330
Msa1085680 MtrunA17_Chr3g0136381 44.321 361 187 5 51 409 30 378 1.61e-108 330
Msa1085680 MtrunA17_Chr8g0372031 41.365 469 254 10 52 509 64 522 1.06e-107 331
Msa1085680 MtrunA17_Chr5g0444721 44.789 355 184 7 164 509 211 562 4.06e-91 289
Msa1085680 MtrunA17_Chr5g0444721 42.953 149 80 3 18 164 2 147 1.54e-34 137
Msa1085680 MtrunA17_Chr2g0291461 39.306 519 260 18 35 513 88 591 6.38e-89 285
Msa1085680 MtrunA17_Chr3g0120661 36.719 512 274 18 33 508 91 588 1.79e-83 271
Msa1085680 MtrunA17_Chr3g0126111 33.588 524 281 19 30 508 79 580 1.24e-80 263
Msa1085680 MtrunA17_Chr4g0018351 64.286 182 63 1 51 232 30 209 3.61e-75 236
Msa1085680 MtrunA17_Chr7g0269571 58.580 169 58 2 355 512 43 210 1.08e-60 199
Msa1085680 MtrunA17_Chr4g0022271 54.610 141 57 3 355 494 20 154 3.01e-41 146
Msa1085680 MtrunA17_Chr1g0164181 47.531 162 82 2 349 509 170 329 1.58e-40 149
Msa1085680 MtrunA17_Chr1g0164181 42.791 215 107 5 93 295 3 213 2.26e-40 148
Msa1085680 MtrunA17_Chr4g0072811 39.130 161 87 5 353 508 8 162 1.73e-24 100
Msa1085680 MtrunA17_Chr3g0136371 46.316 95 48 3 408 501 1 93 2.81e-20 86.3
Msa1085680 MtrunA17_Chr7g0269561 47.619 84 30 1 261 344 25 94 1.39e-17 79.0
Msa1085680 MtrunA17_Chr5g0397171 55.172 58 24 1 35 90 23 80 2.57e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085680 AT1G70710.1 79.108 493 98 3 22 514 1 488 0.0 811
Msa1085680 AT1G23210.1 75.975 487 114 2 28 514 5 488 0.0 781
Msa1085680 AT4G02290.1 62.151 465 173 2 48 512 49 510 0.0 587
Msa1085680 AT4G39010.1 59.488 469 185 4 50 515 28 494 0.0 584
Msa1085680 AT1G02800.1 61.771 463 172 3 50 512 42 499 0.0 566
Msa1085680 AT4G39000.1 54.237 472 211 4 47 515 21 490 0.0 523
Msa1085680 AT4G38990.2 54.601 489 209 8 36 515 9 493 1.30e-179 514
Msa1085680 AT1G22880.1 53.638 481 217 3 33 513 6 480 6.99e-179 512
Msa1085680 AT1G71380.1 52.807 481 221 3 33 513 6 480 3.07e-177 508
Msa1085680 AT4G02290.2 59.601 401 159 2 112 512 1 398 5.28e-168 481
Msa1085680 AT1G64390.1 51.477 474 217 8 48 513 22 490 5.13e-161 471
Msa1085680 AT4G11050.2 50.638 470 219 8 48 509 23 487 1.28e-158 462
Msa1085680 AT4G11050.3 50.638 470 219 8 48 509 23 487 3.57e-158 464
Msa1085680 AT4G11050.1 50.638 470 219 8 48 509 23 487 4.72e-158 464
Msa1085680 AT4G09740.1 50.209 478 223 7 35 509 7 472 4.94e-157 456
Msa1085680 AT4G23560.1 50.000 478 223 8 35 509 8 472 7.01e-157 456
Msa1085680 AT4G39010.2 57.851 363 149 3 50 409 28 389 9.38e-154 444
Msa1085680 AT2G32990.1 46.774 496 234 10 38 509 13 502 1.49e-147 433
Msa1085680 AT1G22880.2 52.239 402 186 3 112 513 1 396 9.74e-146 424
Msa1085680 AT2G44550.1 47.325 486 239 10 31 510 14 488 2.65e-138 409
Msa1085680 AT2G44540.1 46.985 481 240 9 35 509 17 488 1.25e-135 402
Msa1085680 AT3G43860.2 46.137 466 234 8 51 513 34 485 4.09e-135 400
Msa1085680 AT3G43860.1 46.137 466 234 8 51 513 34 485 4.09e-135 400
Msa1085680 AT2G44570.1 47.755 490 233 13 32 509 11 489 3.01e-133 395
Msa1085680 AT1G48930.1 48.077 468 230 8 50 509 29 491 5.21e-133 400
Msa1085680 AT2G44560.1 47.143 490 242 10 28 509 8 488 3.19e-130 388
Msa1085680 AT1G19940.2 42.117 463 251 8 51 506 48 500 7.86e-117 354
Msa1085680 AT1G19940.1 42.117 463 251 8 51 506 48 500 7.86e-117 354
Msa1085680 AT1G22880.3 54.799 323 141 2 33 355 6 323 1.23e-113 340
Msa1085680 AT1G75680.1 43.319 464 244 10 47 502 53 505 1.11e-112 344
Msa1085680 AT4G38990.1 50.689 363 152 5 36 397 9 345 2.69e-111 334
Msa1085680 AT2G44570.2 45.409 403 199 11 32 423 11 403 3.65e-94 292
Msa1085680 AT1G19940.3 39.891 366 208 6 51 409 48 408 1.68e-81 260
Msa1085680 AT5G49720.1 36.754 536 285 18 19 514 68 589 5.53e-81 265
Msa1085680 AT4G24260.1 36.872 537 283 20 19 514 68 589 1.34e-78 258
Msa1085680 AT1G65610.1 34.477 554 301 20 7 513 54 592 3.46e-78 257
Msa1085680 AT4G24260.3 35.035 431 229 18 19 408 68 488 5.53e-49 176
Msa1085680 AT4G24260.2 36.490 359 186 14 19 341 68 420 1.10e-45 166
Msa1085680 AT3G42153.1 41.667 96 48 3 262 353 16 107 1.67e-13 67.4

Find 177 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGGCATGGCTTAGGTAAT+TGG 0.218254 7_2:+86485416 None:intergenic
CCGTTTACATCACAGTAAAA+TGG 0.226605 7_2:+86488211 None:intergenic
CTTGAAAAGGGAAAAGAAAA+TGG 0.226760 7_2:-86484711 Msa1085680:three_prime_UTR
GCTTGGAGTGTGATTGATTT+TGG 0.252189 7_2:-86489001 Msa1085680:CDS
TCTTGTGCAGGAGGTGTTAA+TGG 0.257604 7_2:-86485946 Msa1085680:intron
ACCACATGGCACAACCTTAT+TGG 0.262580 7_2:+86485398 None:intergenic
AGACATTTGGGTTAGGGTTT+GGG 0.278356 7_2:+86484944 None:intergenic
GATTAATGTCCTCATTTCTA+AGG 0.284719 7_2:-86487651 Msa1085680:intron
TACTAGGTTAACTACATTCT+TGG 0.292991 7_2:-86485111 Msa1085680:intron
CTGTGATGTAAACGGTTATC+AGG 0.307699 7_2:-86488203 Msa1085680:intron
GTCCCAACCAAACTCATTAA+TGG 0.312220 7_2:+86487688 None:intergenic
ACTAGGTTAACTACATTCTT+GGG 0.314393 7_2:-86485110 Msa1085680:intron
AAGACATTTGGGTTAGGGTT+TGG 0.317944 7_2:+86484943 None:intergenic
TGATAGAAAGGCCTGGAATC+AGG 0.354115 7_2:+86484874 None:intergenic
CAACAGTTGTGGTCCGATAA+AGG 0.356045 7_2:+86488860 None:intergenic
CCAACCAAGACATTTGGGTT+AGG 0.358950 7_2:+86484937 None:intergenic
ACAGCTCCAACCAAGACATT+TGG 0.360590 7_2:+86484931 None:intergenic
CTCCACTGGCGCCGTGACTC+TGG 0.364161 7_2:-86489204 Msa1085680:CDS
TTGAAAAGGGAAAAGAAAAT+GGG 0.369567 7_2:-86484710 Msa1085680:three_prime_UTR
CAGATTCGTTCCCTGATTCC+AGG 0.376102 7_2:-86484885 Msa1085680:CDS
TTAAAGGCGACGTCAAATAT+AGG 0.380427 7_2:-86488914 Msa1085680:CDS
CCCTCTATTGTTCTTGAAAA+GGG 0.385782 7_2:-86484723 Msa1085680:three_prime_UTR
TCAAGTCGGTGATCCTTTAT+CGG 0.388734 7_2:-86488873 Msa1085680:CDS
TATCTATGTGGTGGGCAAAA+TGG 0.395332 7_2:-86484749 Msa1085680:three_prime_UTR
TTACCTAAGCCATGCCAATA+AGG 0.396072 7_2:-86485412 Msa1085680:CDS
AATTGGAATAAGCTAGTAAC+AGG 0.398288 7_2:+86485433 None:intergenic
ACCCTCTATTGTTCTTGAAA+AGG 0.403689 7_2:-86484724 Msa1085680:three_prime_UTR
TGCATCCAATGTGGGCTGGA+TGG 0.405346 7_2:+86484992 None:intergenic
TTTATTTGTTCAACATTGCC+TGG 0.407844 7_2:-86485879 Msa1085680:CDS
TTGGGAGAGACCGGAAGATA+TGG 0.408576 7_2:-86488840 Msa1085680:CDS
GCATCCAATGTGGGCTGGAT+GGG 0.408688 7_2:+86484993 None:intergenic
CAGCTCCAACCAAGACATTT+GGG 0.414539 7_2:+86484932 None:intergenic
GGTGACACCATTAATGAGTT+TGG 0.414729 7_2:-86487695 Msa1085680:CDS
TTACTAGTTATTATGATTTG+AGG 0.414820 7_2:-86484678 Msa1085680:three_prime_UTR
TCACCTGCCACGTCGGATCC+TGG 0.416771 7_2:+86488779 None:intergenic
CAACCAAGACATTTGGGTTA+GGG 0.416934 7_2:+86484938 None:intergenic
GCTTCTCAATCGTGCCGTTA+CGG 0.417509 7_2:-86488690 Msa1085680:intron
AAAAGGTGGGCTTATCTTCA+AGG 0.417922 7_2:-86485496 Msa1085680:intron
ATGTCCTACATGGTTGGTTA+TGG 0.418907 7_2:-86485072 Msa1085680:CDS
CAAAGAAAAGAATGCTCTTA+CGG 0.423314 7_2:+86489265 None:intergenic
CTTGTGCAGGAGGTGTTAAT+GGG 0.425782 7_2:-86485945 Msa1085680:intron
CACCATTAATGAGTTTGGTT+GGG 0.435935 7_2:-86487690 Msa1085680:CDS
AGTAAAATGGGCACACTGCC+CGG 0.438552 7_2:+86488224 None:intergenic
AGGGAATTGAGCTTCCTCTA+TGG 0.439505 7_2:+86485025 None:intergenic
AATGAAGCTGACCTGGCGTT+TGG 0.439836 7_2:+86485338 None:intergenic
CGTTTACATCACAGTAAAAT+GGG 0.440137 7_2:+86488212 None:intergenic
CAACCTTATTGGCATGGCTT+AGG 0.440764 7_2:+86485409 None:intergenic
TTCTTTGAAGGACAACGCTC+TGG 0.445149 7_2:-86489249 Msa1085680:CDS
TCGGAGCAAAAGGAGGAGTA+TGG 0.446397 7_2:+86489323 None:intergenic
CTCTATGGTGTATCCTCTGT+GGG 0.449617 7_2:+86485040 None:intergenic
GCCCACATTGGATGCAAAGC+TGG 0.453591 7_2:-86484985 Msa1085680:CDS
GGTTGGGACAACAAGCATGC+TGG 0.465263 7_2:-86487674 Msa1085680:CDS
GCCGGCGACAACATAAAGTT+CGG 0.465313 7_2:-86489055 Msa1085680:CDS
CTGCCACGTCGGATCCTGGA+TGG 0.466367 7_2:+86488783 None:intergenic
AGAAGCAATTTAGAGTAAGC+AGG 0.468543 7_2:+86488707 None:intergenic
CGTGACCGGCGGCTATTGTT+CGG 0.473569 7_2:+86489304 None:intergenic
TTCACCCACAGGGTTATAGT+TGG 0.474583 7_2:-86489413 Msa1085680:CDS
GGCTGCAGCGTGGTTGCACA+AGG 0.475533 7_2:-86487777 Msa1085680:CDS
CGCGTTGAAATCAGTGAGGT+GGG 0.476459 7_2:-86488951 Msa1085680:CDS
ACACCATTAATGAGTTTGGT+TGG 0.478749 7_2:-86487691 Msa1085680:CDS
TTGTTTCAGGTGGACTTGAC+CGG 0.479741 7_2:-86489091 Msa1085680:intron
CGGCTATTGTTCGGAGCAAA+AGG 0.480135 7_2:+86489313 None:intergenic
CATCCAGGATCCGACGTGGC+AGG 0.480184 7_2:-86488782 Msa1085680:CDS
CGTCTGATCAGCGTCTCCAC+TGG 0.482629 7_2:-86489218 Msa1085680:CDS
TATATCAATGCACCACTTGT+GGG 0.486411 7_2:-86484832 Msa1085680:CDS
GGCTCAGACTGCTGATAGAA+AGG 0.490540 7_2:+86484862 None:intergenic
GCAAGTCTATATGAAAGTTA+AGG 0.491551 7_2:-86484579 Msa1085680:three_prime_UTR
AGCAGCGGCAAGTGCAGCGG+CGG 0.492359 7_2:+86488754 None:intergenic
GGCTGGATGGGCTGAAACTG+AGG 0.494550 7_2:+86485005 None:intergenic
GTTGGGACAACAAGCATGCT+GGG 0.495472 7_2:-86487673 Msa1085680:CDS
CCGGCGACAACATAAAGTTC+GGG 0.496773 7_2:-86489054 Msa1085680:CDS
AAGATCGATGGGTCCCATCC+AGG 0.505900 7_2:-86488797 Msa1085680:CDS
GCGACGTCAAATATAGGTTC+CGG 0.506748 7_2:-86488908 Msa1085680:CDS
GTCTTGGTTGGAGCTGTAGT+TGG 0.509506 7_2:-86484925 Msa1085680:CDS
TTTATCGGACCACAACTGTT+GGG 0.511695 7_2:-86488858 Msa1085680:CDS
ATTCTTGGGGATAACCCGTT+GGG 0.513192 7_2:-86485096 Msa1085680:CDS
AAGAGTAATGTGTTTGAGCA+AGG 0.515199 7_2:+86489434 None:intergenic
TGGTTGGAGCTGTAGTTGGT+GGG 0.515521 7_2:-86484921 Msa1085680:CDS
CCACAACTGTTGGGAGAGAC+CGG 0.516857 7_2:-86488849 Msa1085680:CDS
CATAAAGTTCGGGTTTCCGT+TGG 0.518098 7_2:-86489044 Msa1085680:CDS
GGCGTGGTGTTTGTTCAAGT+CGG 0.519329 7_2:-86488887 Msa1085680:CDS
AATGTTAACTTGTGCCATCA+AGG 0.521544 7_2:-86484554 Msa1085680:three_prime_UTR
AGCTGACCTGGCGTTTGGCA+AGG 0.523073 7_2:+86485343 None:intergenic
GATAGAAAGGCCTGGAATCA+GGG 0.523647 7_2:+86484875 None:intergenic
CATTCTTGGGGATAACCCGT+TGG 0.526848 7_2:-86485097 Msa1085680:CDS
CTTTATCGGACCACAACTGT+TGG 0.527242 7_2:-86488859 Msa1085680:CDS
GCTTTGCATCCAATGTGGGC+TGG 0.528057 7_2:+86484988 None:intergenic
CGCACAGTTTACAAGATCGA+TGG 0.529865 7_2:-86488809 Msa1085680:CDS
TTACAACGACGATGTTAGCT+TGG 0.531207 7_2:-86489018 Msa1085680:CDS
CAAAAGCCTTGCCAAACGCC+AGG 0.531345 7_2:-86485349 Msa1085680:intron
GAGTAATGCAGGGGTGGCAG+TGG 0.531443 7_2:+86485371 None:intergenic
CCTAACCCAAATGTCTTGGT+TGG 0.533587 7_2:-86484937 Msa1085680:CDS
ACCGGAGGTTACTACGACGC+CGG 0.534390 7_2:-86489073 Msa1085680:CDS
GGAAGCAGCGGCAAGTGCAG+CGG 0.536448 7_2:+86488751 None:intergenic
TTCAACGCGTTACCTAGCTC+AGG 0.537877 7_2:+86488965 None:intergenic
AAACCCTAACCCAAATGTCT+TGG 0.539421 7_2:-86484941 Msa1085680:CDS
TTCCAGAGTCACGGCGCCAG+TGG 0.540232 7_2:+86489202 None:intergenic
CAGTGGAGACGCTGATCAGA+CGG 0.540515 7_2:+86489219 None:intergenic
TTCTTCCAACTATAACCCTG+TGG 0.540992 7_2:+86489408 None:intergenic
TGCCACGTCGGATCCTGGAT+GGG 0.546201 7_2:+86488784 None:intergenic
GGTGGGCTTATCTTCAAGGC+TGG 0.547963 7_2:-86485492 Msa1085680:CDS
CCCGAACTTTATGTTGTCGC+CGG 0.549454 7_2:+86489054 None:intergenic
TTGGTTGGAGCTGTAGTTGG+TGG 0.549558 7_2:-86484922 Msa1085680:CDS
CCATGTAGGACATTCCCAAC+GGG 0.549622 7_2:+86485082 None:intergenic
TTGGGAATGTCCTACATGGT+TGG 0.550043 7_2:-86485078 Msa1085680:CDS
AATATAATATATCTATGTGG+TGG 0.550188 7_2:-86484758 Msa1085680:three_prime_UTR
ATGAATGTACCTTAGAAATG+AGG 0.553073 7_2:+86487642 None:intergenic
AGAGTAATGGGACCTGAGCT+AGG 0.557595 7_2:-86488977 Msa1085680:CDS
ATATATCAATGCACCACTTG+TGG 0.557918 7_2:-86484833 Msa1085680:CDS
ATGGGCACACTGCCCGGCGT+AGG 0.558129 7_2:+86488230 None:intergenic
ATTCACGACGGTGCCACCGC+CGG 0.559048 7_2:-86489180 Msa1085680:CDS
CCCGTTGGGAATGTCCTACA+TGG 0.560864 7_2:-86485082 Msa1085680:CDS
ACACATTACTCTTCACCCAC+AGG 0.560865 7_2:-86489424 Msa1085680:CDS
AGGGAACGAATCTGTAGTGT+TGG 0.563833 7_2:+86484894 None:intergenic
ATATAATATATCTATGTGGT+GGG 0.564951 7_2:-86484757 Msa1085680:three_prime_UTR
AATGAGGCTTACTCCGGCGG+TGG 0.574014 7_2:+86489167 None:intergenic
CCTCTATGGTGTATCCTCTG+TGG 0.576842 7_2:+86485039 None:intergenic
CGTAACGTATCCATATCTTC+CGG 0.577286 7_2:+86488830 None:intergenic
GGGCTTATCTTCAAGGCTGG+TGG 0.577298 7_2:-86485489 Msa1085680:CDS
GAAATCAGTGAGGTGGGGAA+CGG 0.581918 7_2:-86488945 Msa1085680:CDS
TCCAGCTTTGCATCCAATGT+GGG 0.583568 7_2:+86484984 None:intergenic
ATGGCACAACCTTATTGGCA+TGG 0.584108 7_2:+86485403 None:intergenic
GCCGGCGTCGTAGTAACCTC+CGG 0.585051 7_2:+86489072 None:intergenic
TTATACAATGTGCAACATCA+AGG 0.588472 7_2:+86484784 None:intergenic
CACATTACTCTTCACCCACA+GGG 0.588883 7_2:-86489423 Msa1085680:CDS
ACGCGTTGAAATCAGTGAGG+TGG 0.592542 7_2:-86488952 Msa1085680:CDS
ACTTGTGCGTGAGAAAATCC+AGG 0.592850 7_2:+86485861 None:intergenic
TATGGCGAGGACGCGAAATG+TGG 0.593753 7_2:+86489341 None:intergenic
TTGCTCCGAACAATAGCCGC+CGG 0.597884 7_2:-86489309 Msa1085680:CDS
GCACAGTTTACAAGATCGAT+GGG 0.599104 7_2:-86488808 Msa1085680:CDS
GCTGGATGGGCTGAAACTGA+GGG 0.599624 7_2:+86485006 None:intergenic
TGAAAAGGGAAAAGAAAATG+GGG 0.601105 7_2:-86484709 Msa1085680:three_prime_UTR
AGTGGAGACGCTGATCAGAC+GGG 0.602320 7_2:+86489220 None:intergenic
TCAGCCCATCCAGCCCACAT+TGG 0.602704 7_2:-86484997 Msa1085680:CDS
ATACAGTAACAGCCTACGCC+GGG 0.603079 7_2:-86488242 Msa1085680:CDS
CTAGGTTAACTACATTCTTG+GGG 0.606445 7_2:-86485109 Msa1085680:intron
CCGGTCTCTCCCAACAGTTG+TGG 0.609233 7_2:+86488849 None:intergenic
TCTTCCAACTATAACCCTGT+GGG 0.610016 7_2:+86489409 None:intergenic
AGACTGCTGATAGAAAGGCC+TGG 0.611163 7_2:+86484867 None:intergenic
GTGGCAGTGGTGTCACCACA+TGG 0.614304 7_2:+86485384 None:intergenic
ATGAAAGCGACGCACCGTAA+CGG 0.614765 7_2:+86488676 None:intergenic
ATCCAGCTTTGCATCCAATG+TGG 0.619352 7_2:+86484983 None:intergenic
AGCATCGTGATAGTCGTGAC+CGG 0.626278 7_2:+86489290 None:intergenic
CGTCGTGAATTCCAGAGTCA+CGG 0.628890 7_2:+86489193 None:intergenic
TGAAATGAGGCTTACTCCGG+CGG 0.629033 7_2:+86489164 None:intergenic
GGAATAAGCTAGTAACAGGA+AGG 0.629980 7_2:+86485437 None:intergenic
CATACAGTAACAGCCTACGC+CGG 0.630726 7_2:-86488243 Msa1085680:CDS
AACGAATCTGTAGTGTTGGT+AGG 0.633183 7_2:+86484898 None:intergenic
GCACAAGTTCAATATTCCCC+AGG 0.635190 7_2:-86485846 Msa1085680:intron
ACCATGTAGGACATTCCCAA+CGG 0.636931 7_2:+86485081 None:intergenic
CTATTGTTCGGAGCAAAAGG+AGG 0.639799 7_2:+86489316 None:intergenic
GCCAATAAGGTTGTGCCATG+TGG 0.639947 7_2:-86485399 Msa1085680:CDS
TTTACCATAACCAACCATGT+AGG 0.642081 7_2:+86485068 None:intergenic
AGCTAGTAACAGGAAGGACA+AGG 0.643966 7_2:+86485443 None:intergenic
TGGTGCATTGATATATGTCG+TGG 0.645002 7_2:+86484840 None:intergenic
TCTAATATAATATATCTATG+TGG 0.651175 7_2:-86484761 Msa1085680:three_prime_UTR
ATCGTCGTTGTAAACGCCAA+CGG 0.655402 7_2:+86489028 None:intergenic
CCACAGAGGATACACCATAG+AGG 0.656279 7_2:-86485039 Msa1085680:CDS
GGCGGTTTCACCTGCCACGT+CGG 0.660020 7_2:+86488772 None:intergenic
TCTGAACACGATGGAAGCAG+CGG 0.661950 7_2:+86488739 None:intergenic
AAAGCGAGCAGACCCACAAG+TGG 0.662208 7_2:+86484820 None:intergenic
TTTCAGGTGGACTTGACCGG+AGG 0.664744 7_2:-86489088 Msa1085680:intron
GCAAAAGGAGGAGTATGGCG+AGG 0.673126 7_2:+86489328 None:intergenic
GTCCCATCCAGGATCCGACG+TGG 0.677907 7_2:-86488786 Msa1085680:CDS
GTCAAATATAGGTTCCGGCG+TGG 0.689424 7_2:-86488903 Msa1085680:CDS
AGTTGCTTTGGGCTGCAGCG+TGG 0.693038 7_2:-86487787 Msa1085680:CDS
TCTGTATAGACGTCTACGCG+AGG 0.693382 7_2:+86487754 None:intergenic
GGTGCATTGATATATGTCGT+GGG 0.694250 7_2:+86484841 None:intergenic
ATCGTGATAGTCGTGACCGG+CGG 0.702934 7_2:+86489293 None:intergenic
GAGTTTGCTGACAGACATCG+TGG 0.705042 7_2:-86488268 Msa1085680:CDS
GCGTTGAAATCAGTGAGGTG+GGG 0.709801 7_2:-86488950 Msa1085680:CDS
CGTGACTCTGGAATTCACGA+CGG 0.714587 7_2:-86489192 Msa1085680:CDS
ATCACGTGATCTGAACACGA+TGG 0.718797 7_2:+86488730 None:intergenic
AGAATACATTATTCGTAACG+AGG 0.719570 7_2:-86487732 Msa1085680:CDS
GACTTGAACAAACACCACGC+CGG 0.721498 7_2:+86488889 None:intergenic
ATGGTAAACGCTACCCACAG+AGG 0.727149 7_2:-86485053 Msa1085680:CDS
GTAACGCGTTGAAATCAGTG+AGG 0.807841 7_2:-86488955 Msa1085680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAATTTAATTTAATTAAT+TGG - chr7_2:86486139-86486158 Msa1085680:intron 0.0%
!!! TTTAGTTTATTTAATATAAC+CGG + chr7_2:86486935-86486954 None:intergenic 10.0%
!! AATTAAATGAAACTAATTAA+GGG + chr7_2:86487538-86487557 None:intergenic 10.0%
!! AAATTAAATGAAACTAATTA+AGG + chr7_2:86487539-86487558 None:intergenic 10.0%
!!! TAATATTCATATTTTATTGA+TGG + chr7_2:86488002-86488021 None:intergenic 10.0%
!! TAAAAAAATGAAGAAAAGAA+AGG + chr7_2:86485370-86485389 None:intergenic 15.0%
!!! TTAATTTGACTTTATCTAAT+TGG - chr7_2:86487029-86487048 Msa1085680:intron 15.0%
!! AATCTCATAAATAAATTCAA+TGG + chr7_2:86487375-86487394 None:intergenic 15.0%
!! ATTAAATGAAACTAATTAAG+GGG + chr7_2:86487537-86487556 None:intergenic 15.0%
!!! CATTTAATTTTTTTTAGTTC+TGG - chr7_2:86487549-86487568 Msa1085680:intron 15.0%
!! TTATTTAAATGCTATAATCA+CGG + chr7_2:86488219-86488238 None:intergenic 15.0%
!! AAAAGAAAAAACATTAATGA+TGG + chr7_2:86488288-86488307 None:intergenic 15.0%
!! TCTAATATAATATATCTATG+TGG - chr7_2:86489212-86489231 Msa1085680:CDS 15.0%
!! GAAAGAAAAAAACAGAAAAA+TGG - chr7_2:86484585-86484604 Msa1085680:three_prime_UTR 20.0%
!!! CTAAAAAAAGCAATTTTGTT+TGG - chr7_2:86485424-86485443 Msa1085680:CDS 20.0%
!! AAAAAGTGAAATTAAATTCC+CGG + chr7_2:86485544-86485563 None:intergenic 20.0%
!!! TTTTTTTCTGTTATGAATCA+CGG - chr7_2:86485583-86485602 Msa1085680:intron 20.0%
!!! TAAAATTTTCCGTTAAGATA+TGG - chr7_2:86485637-86485656 Msa1085680:intron 20.0%
!!! TTGTTATTGTCCAATAATAA+TGG - chr7_2:86485971-86485990 Msa1085680:intron 20.0%
!!! CAATTTTCAACAACTTTTTA+AGG + chr7_2:86486011-86486030 None:intergenic 20.0%
!! CTTAAAAAGTTGTTGAAAAT+TGG - chr7_2:86486009-86486028 Msa1085680:intron 20.0%
!! ATGATTAATGTATGCATATT+GGG + chr7_2:86486721-86486740 None:intergenic 20.0%
!! TATGATTAATGTATGCATAT+TGG + chr7_2:86486722-86486741 None:intergenic 20.0%
!!! ATCTAATCAAGTTTAAGATA+AGG + chr7_2:86486887-86486906 None:intergenic 20.0%
!!! TTTCATTTTTAAGTTTCATG+TGG - chr7_2:86487272-86487291 Msa1085680:intron 20.0%
!!! TTCATTTTTAAGTTTCATGT+GGG - chr7_2:86487273-86487292 Msa1085680:intron 20.0%
!! GCTTGAATAATAAACAAAAA+CGG + chr7_2:86487301-86487320 None:intergenic 20.0%
!!! AATTTGTCTTTAAAACTTGT+AGG - chr7_2:86487413-86487432 Msa1085680:intron 20.0%
!!! ATTTTTTTTAGTTCTGGAAA+TGG - chr7_2:86487555-86487574 Msa1085680:intron 20.0%
!! TTAAAAAAAAGTTACCACAA+TGG + chr7_2:86487731-86487750 None:intergenic 20.0%
!!! CTTTTTATTTTATATTGCAC+AGG + chr7_2:86487979-86487998 None:intergenic 20.0%
!!! AATATTATTTTATCTTGTGC+AGG - chr7_2:86488015-86488034 Msa1085680:intron 20.0%
!! CTCAAAAGTCAAAAATAAAT+GGG + chr7_2:86488184-86488203 None:intergenic 20.0%
!! TCTCAAAAGTCAAAAATAAA+TGG + chr7_2:86488185-86488204 None:intergenic 20.0%
!!! TTATTTTTGACTTTTGAGAA+AGG - chr7_2:86488186-86488205 Msa1085680:intron 20.0%
!!! TAATGTTTTTTCTTTTTGCA+AGG - chr7_2:86488292-86488311 Msa1085680:intron 20.0%
!! AATATAATATATCTATGTGG+TGG - chr7_2:86489215-86489234 Msa1085680:CDS 20.0%
!! ATATAATATATCTATGTGGT+GGG - chr7_2:86489216-86489235 Msa1085680:CDS 20.0%
!! TTACTAGTTATTATGATTTG+AGG - chr7_2:86489295-86489314 Msa1085680:CDS 20.0%
! ATTAAAAAACAGAGCAATGT+AGG + chr7_2:86484853-86484872 None:intergenic 25.0%
!!! CTCTGTTTTTTAATTTGTTG+TGG - chr7_2:86484859-86484878 Msa1085680:CDS 25.0%
!!! ATTGATTTTGGAAGAGTAAT+GGG - chr7_2:86484984-86485003 Msa1085680:CDS 25.0%
!!! ACCACTTTTTAAATTTACCA+CGG + chr7_2:86485481-86485500 None:intergenic 25.0%
!! ATTTTCTCACCATATCTTAA+CGG + chr7_2:86485649-86485668 None:intergenic 25.0%
! TCACAAAAGTTGTTGAAAAT+TGG + chr7_2:86485890-86485909 None:intergenic 25.0%
! ATAACAATAGAGAGAGAAAA+AGG + chr7_2:86485958-86485977 None:intergenic 25.0%
! TTATTGTCCAATAATAATGG+AGG - chr7_2:86485974-86485993 Msa1085680:intron 25.0%
! GTAATACAGTAAGTATTAAG+AGG + chr7_2:86486051-86486070 None:intergenic 25.0%
! ATTAATTGGAAAATCACTTG+TGG - chr7_2:86486153-86486172 Msa1085680:intron 25.0%
!! ACTAAGTACTACAGTATTTT+AGG - chr7_2:86486395-86486414 Msa1085680:intron 25.0%
!! ATTATTTGTTACTATGTGTG+TGG - chr7_2:86486488-86486507 Msa1085680:intron 25.0%
!! TTATTTGTTACTATGTGTGT+GGG - chr7_2:86486489-86486508 Msa1085680:intron 25.0%
! TGTGGTGTGAAAATAATTAA+TGG + chr7_2:86486809-86486828 None:intergenic 25.0%
!! ATTTGACTTTATCTAATTGG+TGG - chr7_2:86487032-86487051 Msa1085680:intron 25.0%
!! TTTGACTTTATCTAATTGGT+GGG - chr7_2:86487033-86487052 Msa1085680:intron 25.0%
! TATGAGATTGATTGATATCA+AGG - chr7_2:86487386-86487405 Msa1085680:intron 25.0%
! ATGAGATTGATTGATATCAA+GGG - chr7_2:86487387-86487406 Msa1085680:intron 25.0%
!! TTTTCCAAATGTTTACGATA+TGG + chr7_2:86487508-86487527 None:intergenic 25.0%
! TTATCTATCCAAAAAGTCAT+TGG - chr7_2:86487876-86487895 Msa1085680:intron 25.0%
! TATCTATCCAAAAAGTCATT+GGG - chr7_2:86487877-86487896 Msa1085680:intron 25.0%
! AAAAACATTAATGATGGCTT+AGG + chr7_2:86488282-86488301 None:intergenic 25.0%
! GTTGGTTAACAATGTAAAAA+AGG - chr7_2:86488460-86488479 Msa1085680:intron 25.0%
! GTTAACAATGTAAAAAAGGT+GGG - chr7_2:86488464-86488483 Msa1085680:intron 25.0%
! TGATGTTGAAAACAAGAAAT+TGG + chr7_2:86488685-86488704 None:intergenic 25.0%
! TTGAAAAGGGAAAAGAAAAT+GGG - chr7_2:86489263-86489282 Msa1085680:CDS 25.0%
!!! TTGATGATGATTTTATGAAG+TGG - chr7_2:86489372-86489391 Msa1085680:CDS 25.0%
CAAAGAAAAGAATGCTCTTA+CGG + chr7_2:86484711-86484730 None:intergenic 30.0%
!!! AAGAGCATTCTTTTCTTTGA+AGG - chr7_2:86484712-86484731 Msa1085680:three_prime_UTR 30.0%
!! TAATTTGTTGTGGTTGTTTC+AGG - chr7_2:86484869-86484888 Msa1085680:CDS 30.0%
!! GATTGATTTTGGAAGAGTAA+TGG - chr7_2:86484983-86485002 Msa1085680:CDS 30.0%
ACCGTGGTAAATTTAAAAAG+TGG - chr7_2:86485477-86485496 Msa1085680:CDS 30.0%
CGTTTACATCACAGTAAAAT+GGG + chr7_2:86485764-86485783 None:intergenic 30.0%
! CCATTTTACTGTGATGTAAA+CGG - chr7_2:86485762-86485781 Msa1085680:intron 30.0%
!! GTAGGAGTATTTAATACTTC+AGG - chr7_2:86485848-86485867 Msa1085680:CDS 30.0%
AAAAGGAAGAGAGAGAATAA+AGG + chr7_2:86485941-86485960 None:intergenic 30.0%
! CCTTTTTCCTCCATTATTAT+TGG + chr7_2:86485984-86486003 None:intergenic 30.0%
! CCAATAATAATGGAGGAAAA+AGG - chr7_2:86485981-86486000 Msa1085680:intron 30.0%
CTCTCTAGATTAGTAGTATT+TGG - chr7_2:86486080-86486099 Msa1085680:intron 30.0%
AGAATACATTATTCGTAACG+AGG - chr7_2:86486241-86486260 Msa1085680:intron 30.0%
GATTAATGTCCTCATTTCTA+AGG - chr7_2:86486322-86486341 Msa1085680:intron 30.0%
ATGAATGTACCTTAGAAATG+AGG + chr7_2:86486334-86486353 None:intergenic 30.0%
CTGCTTCAATGAAATTAACA+GGG + chr7_2:86486371-86486390 None:intergenic 30.0%
AGGAATAATAGAGTCCTAAT+TGG + chr7_2:86486687-86486706 None:intergenic 30.0%
TAGGACTCTATTATTCCTAT+TGG - chr7_2:86486689-86486708 Msa1085680:intron 30.0%
TAATGTATGCATATTGGGAA+TGG + chr7_2:86486716-86486735 None:intergenic 30.0%
! TATAACCGGTTTACTATAAG+CGG + chr7_2:86486921-86486940 None:intergenic 30.0%
ATGTTTATGTGAGTACAGAT+TGG - chr7_2:86487128-86487147 Msa1085680:intron 30.0%
! TAGAAAAAGCTTTATCCGTT+TGG - chr7_2:86487169-86487188 Msa1085680:intron 30.0%
TTTCAATACCAATCACCAAA+CGG + chr7_2:86487187-86487206 None:intergenic 30.0%
TCAAGATAGCAATGAGAAAA+GGG - chr7_2:86487208-86487227 Msa1085680:intron 30.0%
ATCCAAAGTTCCAATTATCA+CGG + chr7_2:86487332-86487351 None:intergenic 30.0%
TGAGATTGATTGATATCAAG+GGG - chr7_2:86487388-86487407 Msa1085680:intron 30.0%
AAACTTGTAGGACTAGAATT+TGG - chr7_2:86487425-86487444 Msa1085680:intron 30.0%
AACTTGTAGGACTAGAATTT+GGG - chr7_2:86487426-86487445 Msa1085680:intron 30.0%
!!! TTTTTAGTTCTGGAAATGGA+TGG - chr7_2:86487559-86487578 Msa1085680:intron 30.0%
TGAAATTGTGCAGGAAATAA+TGG + chr7_2:86487621-86487640 None:intergenic 30.0%
CACAATTTCACTTTCTATCA+GGG - chr7_2:86487631-86487650 Msa1085680:intron 30.0%
! AAGAAATATGATGTTGATGG+GGG + chr7_2:86487687-86487706 None:intergenic 30.0%
CAAGAAATATGATGTTGATG+GGG + chr7_2:86487688-86487707 None:intergenic 30.0%
GCAAGAAATATGATGTTGAT+GGG + chr7_2:86487689-86487708 None:intergenic 30.0%
TGCAAGAAATATGATGTTGA+TGG + chr7_2:86487690-86487709 None:intergenic 30.0%
! TACAAAACCCAATGACTTTT+TGG + chr7_2:86487887-86487906 None:intergenic 30.0%
!! AAAAGTCATTGGGTTTTGTA+CGG - chr7_2:86487887-86487906 Msa1085680:intron 30.0%
ATATTGCACAGGTTAATAGT+AGG + chr7_2:86487968-86487987 None:intergenic 30.0%
!! ATTATTTTATCTTGTGCAGG+AGG - chr7_2:86488018-86488037 Msa1085680:intron 30.0%
TTTATTTGTTCAACATTGCC+TGG - chr7_2:86488094-86488113 Msa1085680:intron 30.0%
ATGAGGGAATATATATACCT+GGG + chr7_2:86488147-86488166 None:intergenic 30.0%
AATGAGGGAATATATATACC+TGG + chr7_2:86488148-86488167 None:intergenic 30.0%
ACATACAAACACTCAATCTA+AGG + chr7_2:86488323-86488342 None:intergenic 30.0%
ACTGTGCACAATACTAAATA+GGG + chr7_2:86488362-86488381 None:intergenic 30.0%
AACTGTGCACAATACTAAAT+AGG + chr7_2:86488363-86488382 None:intergenic 30.0%
CACAGTTATTATTGCATAGA+CGG - chr7_2:86488376-86488395 Msa1085680:intron 30.0%
AAAGAAACAAACAAACACTG+TGG + chr7_2:86488414-86488433 None:intergenic 30.0%
! AGAGGAAGTTTGAGTTATTT+AGG + chr7_2:86488437-86488456 None:intergenic 30.0%
ACATTGTTAACCAACAAAAG+AGG + chr7_2:86488455-86488474 None:intergenic 30.0%
GGTTAACAATGTAAAAAAGG+TGG - chr7_2:86488463-86488482 Msa1085680:intron 30.0%
AATTGGAATAAGCTAGTAAC+AGG + chr7_2:86488543-86488562 None:intergenic 30.0%
TCAACATCAGACAAAACTAA+CGG - chr7_2:86488696-86488715 Msa1085680:CDS 30.0%
ACGTGATATATACACAAAGT+TGG - chr7_2:86488777-86488796 Msa1085680:CDS 30.0%
TACTAGGTTAACTACATTCT+TGG - chr7_2:86488862-86488881 Msa1085680:CDS 30.0%
ACTAGGTTAACTACATTCTT+GGG - chr7_2:86488863-86488882 Msa1085680:CDS 30.0%
TTATACAATGTGCAACATCA+AGG + chr7_2:86489192-86489211 None:intergenic 30.0%
CTTGAAAAGGGAAAAGAAAA+TGG - chr7_2:86489262-86489281 Msa1085680:CDS 30.0%
TGAAAAGGGAAAAGAAAATG+GGG - chr7_2:86489264-86489283 Msa1085680:CDS 30.0%
GCAAGTCTATATGAAAGTTA+AGG - chr7_2:86489394-86489413 Msa1085680:CDS 30.0%
TTAAAGGCGACGTCAAATAT+AGG - chr7_2:86485059-86485078 Msa1085680:CDS 35.0%
! AGAAGCAATTTAGAGTAAGC+AGG + chr7_2:86485269-86485288 None:intergenic 35.0%
TTATGAATCACGGAGTTAGT+TGG - chr7_2:86485593-86485612 Msa1085680:intron 35.0%
CCGTTTACATCACAGTAAAA+TGG + chr7_2:86485765-86485784 None:intergenic 35.0%
ACAGAACAATACCTCTTTGA+TGG - chr7_2:86485816-86485835 Msa1085680:intron 35.0%
ACTGAATAGTACCATCAAAG+AGG + chr7_2:86485830-86485849 None:intergenic 35.0%
! CTTTGATGGTACTATTCAGT+AGG - chr7_2:86485830-86485849 Msa1085680:intron 35.0%
! GGAAAATCACTTGTGGTTTT+AGG - chr7_2:86486160-86486179 Msa1085680:intron 35.0%
!!! GTTTTAGGATGAGTTGCTTT+GGG - chr7_2:86486175-86486194 Msa1085680:intron 35.0%
ACACCATTAATGAGTTTGGT+TGG - chr7_2:86486282-86486301 Msa1085680:intron 35.0%
CACCATTAATGAGTTTGGTT+GGG - chr7_2:86486283-86486302 Msa1085680:intron 35.0%
CTTCAATGAAATTAACAGGG+AGG + chr7_2:86486368-86486387 None:intergenic 35.0%
GCTGCTTCAATGAAATTAAC+AGG + chr7_2:86486372-86486391 None:intergenic 35.0%
AGGGAACTTTATCACTAGAT+TGG + chr7_2:86486626-86486645 None:intergenic 35.0%
!! TTAAGTGAAGTGCTCTGTTT+TGG + chr7_2:86486781-86486800 None:intergenic 35.0%
GTAATCCGCTTATAGTAAAC+CGG - chr7_2:86486913-86486932 Msa1085680:intron 35.0%
TATGCATGGTACAACAAGAA+AGG - chr7_2:86487103-86487122 Msa1085680:intron 35.0%
ATGCATGGTACAACAAGAAA+GGG - chr7_2:86487104-86487123 Msa1085680:intron 35.0%
GTCAAGATAGCAATGAGAAA+AGG - chr7_2:86487207-86487226 Msa1085680:intron 35.0%
CAAGATAGCAATGAGAAAAG+GGG - chr7_2:86487209-86487228 Msa1085680:intron 35.0%
TTCCGTGATAATTGGAACTT+TGG - chr7_2:86487327-86487346 Msa1085680:intron 35.0%
GCTTTAATCTGAACCAAACT+GGG - chr7_2:86487463-86487482 Msa1085680:intron 35.0%
CCAAATGTTTACGATATGGA+GGG + chr7_2:86487504-86487523 None:intergenic 35.0%
TCCAAATGTTTACGATATGG+AGG + chr7_2:86487505-86487524 None:intergenic 35.0%
GATAGAAAGTGAAATTGTGC+AGG + chr7_2:86487630-86487649 None:intergenic 35.0%
GCACAATTTCACTTTCTATC+AGG - chr7_2:86487630-86487649 Msa1085680:intron 35.0%
CAATGGTGTGTTACAAGAAA+AGG + chr7_2:86487714-86487733 None:intergenic 35.0%
TTTCTTGTAACACACCATTG+TGG - chr7_2:86487714-86487733 Msa1085680:CDS 35.0%
!! AAAGTCATTGGGTTTTGTAC+GGG - chr7_2:86487888-86487907 Msa1085680:intron 35.0%
TGAGGGAATATATATACCTG+GGG + chr7_2:86488146-86488165 None:intergenic 35.0%
GGCAAAACAAAACACAATGA+GGG + chr7_2:86488163-86488182 None:intergenic 35.0%
TATTGCATAGACGGCAATAT+TGG - chr7_2:86488385-86488404 Msa1085680:intron 35.0%
! ACTCAAACTTCCTCTTTTGT+TGG - chr7_2:86488442-86488461 Msa1085680:intron 35.0%
! TTCCCCGTTGATTAATTCTT+TGG - chr7_2:86488657-86488676 Msa1085680:intron 35.0%
! TCCCCGTTGATTAATTCTTT+GGG - chr7_2:86488658-86488677 Msa1085680:intron 35.0%
TCCCAAAGAATTAATCAACG+GGG + chr7_2:86488662-86488681 None:intergenic 35.0%
GTCCCAAAGAATTAATCAAC+GGG + chr7_2:86488663-86488682 None:intergenic 35.0%
GGTCCCAAAGAATTAATCAA+CGG + chr7_2:86488664-86488683 None:intergenic 35.0%
! CGTTGCTTTCATTTACTACT+AGG - chr7_2:86488846-86488865 Msa1085680:CDS 35.0%
CTAGGTTAACTACATTCTTG+GGG - chr7_2:86488864-86488883 Msa1085680:CDS 35.0%
TTTACCATAACCAACCATGT+AGG + chr7_2:86488908-86488927 None:intergenic 35.0%
ATATATCAATGCACCACTTG+TGG - chr7_2:86489140-86489159 Msa1085680:intron 35.0%
TATATCAATGCACCACTTGT+GGG - chr7_2:86489141-86489160 Msa1085680:intron 35.0%
ACCCTCTATTGTTCTTGAAA+AGG - chr7_2:86489249-86489268 Msa1085680:CDS 35.0%
!! CCCTTTTCAAGAACAATAGA+GGG + chr7_2:86489253-86489272 None:intergenic 35.0%
CCCTCTATTGTTCTTGAAAA+GGG - chr7_2:86489250-86489269 Msa1085680:CDS 35.0%
!! TCCCTTTTCAAGAACAATAG+AGG + chr7_2:86489254-86489273 None:intergenic 35.0%
!! AATGTTAACTTGTGCCATCA+AGG - chr7_2:86489419-86489438 Msa1085680:CDS 35.0%
TCTTCCAACTATAACCCTGT+GGG + chr7_2:86484567-86484586 None:intergenic 40.0%
TTCTTCCAACTATAACCCTG+TGG + chr7_2:86484568-86484587 None:intergenic 40.0%
ATGTGAAATGAGGCTTACTC+CGG + chr7_2:86484815-86484834 None:intergenic 40.0%
! ACAGAGCACTATGTGAAATG+AGG + chr7_2:86484825-86484844 None:intergenic 40.0%
! TTTGTTGTGGTTGTTTCAGG+TGG - chr7_2:86484872-86484891 Msa1085680:CDS 40.0%
TTACAACGACGATGTTAGCT+TGG - chr7_2:86484955-86484974 Msa1085680:CDS 40.0%
!! GCTTGGAGTGTGATTGATTT+TGG - chr7_2:86484972-86484991 Msa1085680:CDS 40.0%
!!! GGGAACGGACTATCTTTTAA+AGG - chr7_2:86485043-86485062 Msa1085680:CDS 40.0%
TCAAGTCGGTGATCCTTTAT+CGG - chr7_2:86485100-86485119 Msa1085680:CDS 40.0%
TTTATCGGACCACAACTGTT+GGG - chr7_2:86485115-86485134 Msa1085680:intron 40.0%
CGTAACGTATCCATATCTTC+CGG + chr7_2:86485146-86485165 None:intergenic 40.0%
GCACAGTTTACAAGATCGAT+GGG - chr7_2:86485165-86485184 Msa1085680:intron 40.0%
GAGAGAAGATTGCATGGAAT+GGG + chr7_2:86485324-86485343 None:intergenic 40.0%
AGAGAGAAGATTGCATGGAA+TGG + chr7_2:86485325-86485344 None:intergenic 40.0%
! TAAATTCCCGGTAAAGTGCT+TGG + chr7_2:86485532-86485551 None:intergenic 40.0%
CTGTGATGTAAACGGTTATC+AGG - chr7_2:86485770-86485789 Msa1085680:intron 40.0%
!!! GGTTTTAGGATGAGTTGCTT+TGG - chr7_2:86486174-86486193 Msa1085680:intron 40.0%
GGTGACACCATTAATGAGTT+TGG - chr7_2:86486278-86486297 Msa1085680:intron 40.0%
GTCCCAACCAAACTCATTAA+TGG + chr7_2:86486288-86486307 None:intergenic 40.0%
GATAAAGTTCCCTTATCACG+TGG - chr7_2:86486633-86486652 Msa1085680:intron 40.0%
ACAAACAGACCACGTGATAA+GGG + chr7_2:86486645-86486664 None:intergenic 40.0%
GTGATGCACTTTCTCCAATT+AGG - chr7_2:86486670-86486689 Msa1085680:intron 40.0%
CATATTGGGAATGGACCAAT+AGG + chr7_2:86486707-86486726 None:intergenic 40.0%
!!! CTGTTTTGGTGTTTTGCTTG+TGG + chr7_2:86486767-86486786 None:intergenic 40.0%
CAGAAGAAACACAATGCATG+TGG + chr7_2:86486827-86486846 None:intergenic 40.0%
! TATCTAATTGGTGGGTCACA+TGG - chr7_2:86487041-86487060 Msa1085680:intron 40.0%
GAATCTATGACACGATGAAG+AGG - chr7_2:86487063-86487082 Msa1085680:intron 40.0%
! AGCTTTATCCGTTTGGTGAT+TGG - chr7_2:86487176-86487195 Msa1085680:intron 40.0%
GCAAGACATTCCGTGATAAT+TGG - chr7_2:86487319-86487338 Msa1085680:intron 40.0%
TTGTAGGACTAGAATTTGGG+TGG - chr7_2:86487429-86487448 Msa1085680:intron 40.0%
CGCTTTAATCTGAACCAAAC+TGG - chr7_2:86487462-86487481 Msa1085680:intron 40.0%
TTAATCTGAACCAAACTGGG+TGG - chr7_2:86487466-86487485 Msa1085680:intron 40.0%
CCCTCCATATCGTAAACATT+TGG - chr7_2:86487501-86487520 Msa1085680:intron 40.0%
TTGTGCAGGAAATAATGGTG+AGG + chr7_2:86487616-86487635 None:intergenic 40.0%
! TGTTGATGGGGGCTTAAAAA+AGG + chr7_2:86487676-86487695 None:intergenic 40.0%
! GTTTTGTACGGGATTCTGTT+AGG - chr7_2:86487899-86487918 Msa1085680:intron 40.0%
ATTCTGTTAGGTCAGAGACA+CGG - chr7_2:86487911-86487930 Msa1085680:intron 40.0%
GGGCAAAACAAAACACAATG+AGG + chr7_2:86488164-86488183 None:intergenic 40.0%
TTAATGATGGCTTAGGCCTT+TGG + chr7_2:86488275-86488294 None:intergenic 40.0%
! AAAAGGTGGGCTTATCTTCA+AGG - chr7_2:86488477-86488496 Msa1085680:intron 40.0%
GGAATAAGCTAGTAACAGGA+AGG + chr7_2:86488539-86488558 None:intergenic 40.0%
ATTGGCATGGCTTAGGTAAT+TGG + chr7_2:86488560-86488579 None:intergenic 40.0%
TTACCTAAGCCATGCCAATA+AGG - chr7_2:86488561-86488580 Msa1085680:intron 40.0%
!! AAGGCTTTTGAGTAATGCAG+GGG + chr7_2:86488614-86488633 None:intergenic 40.0%
!! CAAGGCTTTTGAGTAATGCA+GGG + chr7_2:86488615-86488634 None:intergenic 40.0%
! ATGTCCTACATGGTTGGTTA+TGG - chr7_2:86488901-86488920 Msa1085680:CDS 40.0%
! AGACATTTGGGTTAGGGTTT+GGG + chr7_2:86489032-86489051 None:intergenic 40.0%
! AAGACATTTGGGTTAGGGTT+TGG + chr7_2:86489033-86489052 None:intergenic 40.0%
AAACCCTAACCCAAATGTCT+TGG - chr7_2:86489032-86489051 Msa1085680:CDS 40.0%
! CAACCAAGACATTTGGGTTA+GGG + chr7_2:86489038-86489057 None:intergenic 40.0%
!! AACGAATCTGTAGTGTTGGT+AGG + chr7_2:86489078-86489097 None:intergenic 40.0%
! GGTGCATTGATATATGTCGT+GGG + chr7_2:86489135-86489154 None:intergenic 40.0%
! TGGTGCATTGATATATGTCG+TGG + chr7_2:86489136-86489155 None:intergenic 40.0%
!! TATCTATGTGGTGGGCAAAA+TGG - chr7_2:86489224-86489243 Msa1085680:CDS 40.0%
ACACATTACTCTTCACCCAC+AGG - chr7_2:86484549-86484568 Msa1085680:three_prime_UTR 45.0%
CACATTACTCTTCACCCACA+GGG - chr7_2:86484550-86484569 Msa1085680:three_prime_UTR 45.0%
TTCACCCACAGGGTTATAGT+TGG - chr7_2:86484560-86484579 Msa1085680:three_prime_UTR 45.0%
CTATTGTTCGGAGCAAAAGG+AGG + chr7_2:86484660-86484679 None:intergenic 45.0%
! TTCTTTGAAGGACAACGCTC+TGG - chr7_2:86484724-86484743 Msa1085680:three_prime_UTR 45.0%
! TTGTTTCAGGTGGACTTGAC+CGG - chr7_2:86484882-86484901 Msa1085680:CDS 45.0%
! CATAAAGTTCGGGTTTCCGT+TGG - chr7_2:86484929-86484948 Msa1085680:CDS 45.0%
ATCGTCGTTGTAAACGCCAA+CGG + chr7_2:86484948-86484967 None:intergenic 45.0%
GTAACGCGTTGAAATCAGTG+AGG - chr7_2:86485018-86485037 Msa1085680:CDS 45.0%
GCGACGTCAAATATAGGTTC+CGG - chr7_2:86485065-86485084 Msa1085680:CDS 45.0%
CAACAGTTGTGGTCCGATAA+AGG + chr7_2:86485116-86485135 None:intergenic 45.0%
CTTTATCGGACCACAACTGT+TGG - chr7_2:86485114-86485133 Msa1085680:intron 45.0%
CGCACAGTTTACAAGATCGA+TGG - chr7_2:86485164-86485183 Msa1085680:intron 45.0%
ATCACGTGATCTGAACACGA+TGG + chr7_2:86485246-86485265 None:intergenic 45.0%
GAGAGAGAGAGAAGATTGCA+TGG + chr7_2:86485330-86485349 None:intergenic 45.0%
GTAGAAAACTAGCGAAACCG+TGG - chr7_2:86485461-86485480 Msa1085680:CDS 45.0%
GGTGAGAAAATGACCGTTGA+TGG - chr7_2:86485658-86485677 Msa1085680:intron 45.0%
! GAGAAAATGACCGTTGATGG+TGG - chr7_2:86485661-86485680 Msa1085680:intron 45.0%
!!! AACGAGGTTGTTTTGAGAGC+TGG - chr7_2:86486257-86486276 Msa1085680:intron 45.0%
AACGGGGAATGCAAGACAAT+AGG + chr7_2:86486558-86486577 None:intergenic 45.0%
ATTGTCTTGCATTCCCCGTT+AGG - chr7_2:86486558-86486577 Msa1085680:intron 45.0%
CACAAACAGACCACGTGATA+AGG + chr7_2:86486646-86486665 None:intergenic 45.0%
TGTGCAACTGTGCATATGCA+TGG - chr7_2:86487089-86487108 Msa1085680:intron 45.0%
GATATGGAGGGCAAAGAGTT+TGG + chr7_2:86487492-86487511 None:intergenic 45.0%
CACATGCATAGTGCAGTACT+GGG + chr7_2:86487591-86487610 None:intergenic 45.0%
AGTTACAGCAGTGACAGCAA+GGG + chr7_2:86487763-86487782 None:intergenic 45.0%
TTCTGTTAGGTCAGAGACAC+GGG - chr7_2:86487912-86487931 Msa1085680:intron 45.0%
!! TCTTGTGCAGGAGGTGTTAA+TGG - chr7_2:86488027-86488046 Msa1085680:intron 45.0%
!! CTTGTGCAGGAGGTGTTAAT+GGG - chr7_2:86488028-86488047 Msa1085680:intron 45.0%
ACTTGTGCGTGAGAAAATCC+AGG + chr7_2:86488115-86488134 None:intergenic 45.0%
GCACAAGTTCAATATTCCCC+AGG - chr7_2:86488127-86488146 Msa1085680:intron 45.0%
AGCTAGTAACAGGAAGGACA+AGG + chr7_2:86488533-86488552 None:intergenic 45.0%
CAACCTTATTGGCATGGCTT+AGG + chr7_2:86488567-86488586 None:intergenic 45.0%
ATGGCACAACCTTATTGGCA+TGG + chr7_2:86488573-86488592 None:intergenic 45.0%
ACCACATGGCACAACCTTAT+TGG + chr7_2:86488578-86488597 None:intergenic 45.0%
!! GCAAGGCTTTTGAGTAATGC+AGG + chr7_2:86488616-86488635 None:intergenic 45.0%
ATTCTTGGGGATAACCCGTT+GGG - chr7_2:86488877-86488896 Msa1085680:CDS 45.0%
ACCATGTAGGACATTCCCAA+CGG + chr7_2:86488895-86488914 None:intergenic 45.0%
TTGGGAATGTCCTACATGGT+TGG - chr7_2:86488895-86488914 Msa1085680:CDS 45.0%
CTCTATGGTGTATCCTCTGT+GGG + chr7_2:86488936-86488955 None:intergenic 45.0%
AGGGAATTGAGCTTCCTCTA+TGG + chr7_2:86488951-86488970 None:intergenic 45.0%
TCCAGCTTTGCATCCAATGT+GGG + chr7_2:86488992-86489011 None:intergenic 45.0%
ATCCAGCTTTGCATCCAATG+TGG + chr7_2:86488993-86489012 None:intergenic 45.0%
! CCAACCAAGACATTTGGGTT+AGG + chr7_2:86489039-86489058 None:intergenic 45.0%
CCTAACCCAAATGTCTTGGT+TGG - chr7_2:86489036-86489055 Msa1085680:CDS 45.0%
CAGCTCCAACCAAGACATTT+GGG + chr7_2:86489044-86489063 None:intergenic 45.0%
ACAGCTCCAACCAAGACATT+TGG + chr7_2:86489045-86489064 None:intergenic 45.0%
AGGGAACGAATCTGTAGTGT+TGG + chr7_2:86489082-86489101 None:intergenic 45.0%
GATAGAAAGGCCTGGAATCA+GGG + chr7_2:86489101-86489120 None:intergenic 45.0%
TGATAGAAAGGCCTGGAATC+AGG + chr7_2:86489102-86489121 None:intergenic 45.0%
!! TATTAAAAAAAAATTAAATC+AGG - chr7_2:86486976-86486995 Msa1085680:intron 5.0%
TCGGAGCAAAAGGAGGAGTA+TGG + chr7_2:86484653-86484672 None:intergenic 50.0%
CGGCTATTGTTCGGAGCAAA+AGG + chr7_2:86484663-86484682 None:intergenic 50.0%
AGCATCGTGATAGTCGTGAC+CGG + chr7_2:86484686-86484705 None:intergenic 50.0%
CGTCGTGAATTCCAGAGTCA+CGG + chr7_2:86484783-86484802 None:intergenic 50.0%
!! CGTGACTCTGGAATTCACGA+CGG - chr7_2:86484781-86484800 Msa1085680:three_prime_UTR 50.0%
TGAAATGAGGCTTACTCCGG+CGG + chr7_2:86484812-86484831 None:intergenic 50.0%
GCCGGCGACAACATAAAGTT+CGG - chr7_2:86484918-86484937 Msa1085680:CDS 50.0%
CCCGAACTTTATGTTGTCGC+CGG + chr7_2:86484922-86484941 None:intergenic 50.0%
CCGGCGACAACATAAAGTTC+GGG - chr7_2:86484919-86484938 Msa1085680:CDS 50.0%
! AGAGTAATGGGACCTGAGCT+AGG - chr7_2:86484996-86485015 Msa1085680:CDS 50.0%
TTCAACGCGTTACCTAGCTC+AGG + chr7_2:86485011-86485030 None:intergenic 50.0%
ACGCGTTGAAATCAGTGAGG+TGG - chr7_2:86485021-86485040 Msa1085680:CDS 50.0%
CGCGTTGAAATCAGTGAGGT+GGG - chr7_2:86485022-86485041 Msa1085680:CDS 50.0%
GCGTTGAAATCAGTGAGGTG+GGG - chr7_2:86485023-86485042 Msa1085680:CDS 50.0%
GAAATCAGTGAGGTGGGGAA+CGG - chr7_2:86485028-86485047 Msa1085680:CDS 50.0%
GTCAAATATAGGTTCCGGCG+TGG - chr7_2:86485070-86485089 Msa1085680:CDS 50.0%
GACTTGAACAAACACCACGC+CGG + chr7_2:86485087-86485106 None:intergenic 50.0%
GGCGTGGTGTTTGTTCAAGT+CGG - chr7_2:86485086-86485105 Msa1085680:CDS 50.0%
TTGGGAGAGACCGGAAGATA+TGG - chr7_2:86485133-86485152 Msa1085680:intron 50.0%
TCTGAACACGATGGAAGCAG+CGG + chr7_2:86485237-86485256 None:intergenic 50.0%
! GCTTCTCAATCGTGCCGTTA+CGG - chr7_2:86485283-86485302 Msa1085680:intron 50.0%
ATGAAAGCGACGCACCGTAA+CGG + chr7_2:86485300-86485319 None:intergenic 50.0%
GCCCATTCCAAGCACTTTAC+CGG - chr7_2:86485522-86485541 Msa1085680:intron 50.0%
! CCCGGTAAAGTGCTTGGAAT+GGG + chr7_2:86485526-86485545 None:intergenic 50.0%
CCCATTCCAAGCACTTTACC+GGG - chr7_2:86485523-86485542 Msa1085680:intron 50.0%
! TCCCGGTAAAGTGCTTGGAA+TGG + chr7_2:86485527-86485546 None:intergenic 50.0%
CACACACTCACCACCATCAA+CGG + chr7_2:86485674-86485693 None:intergenic 50.0%
!! GAGTTTGCTGACAGACATCG+TGG - chr7_2:86485705-86485724 Msa1085680:intron 50.0%
CATACAGTAACAGCCTACGC+CGG - chr7_2:86485730-86485749 Msa1085680:intron 50.0%
ATACAGTAACAGCCTACGCC+GGG - chr7_2:86485731-86485750 Msa1085680:intron 50.0%
AGTAAAATGGGCACACTGCC+CGG + chr7_2:86485752-86485771 None:intergenic 50.0%
TCTGTATAGACGTCTACGCG+AGG + chr7_2:86486222-86486241 None:intergenic 50.0%
GTTGGGACAACAAGCATGCT+GGG - chr7_2:86486300-86486319 Msa1085680:intron 50.0%
AAGAGTTTGGCCACCCAGTT+TGG + chr7_2:86487479-86487498 None:intergenic 50.0%
! TGCATAGTGCAGTACTGGGT+GGG + chr7_2:86487587-86487606 None:intergenic 50.0%
! ATGCATAGTGCAGTACTGGG+TGG + chr7_2:86487588-86487607 None:intergenic 50.0%
GCACATGCATAGTGCAGTAC+TGG + chr7_2:86487592-86487611 None:intergenic 50.0%
CAGTTACAGCAGTGACAGCA+AGG + chr7_2:86487764-86487783 None:intergenic 50.0%
ACCCATGTGTCCATGACCAA+AGG - chr7_2:86488256-86488275 Msa1085680:CDS 50.0%
GCCTTTGGTCATGGACACAT+GGG + chr7_2:86488260-86488279 None:intergenic 50.0%
ATGGCTTAGGCCTTTGGTCA+TGG + chr7_2:86488269-86488288 None:intergenic 50.0%
GCCAATAAGGTTGTGCCATG+TGG - chr7_2:86488574-86488593 Msa1085680:intron 50.0%
!! GCTTTTGAGTAATGCAGGGG+TGG + chr7_2:86488611-86488630 None:intergenic 50.0%
AATGAAGCTGACCTGGCGTT+TGG + chr7_2:86488638-86488657 None:intergenic 50.0%
CATTCTTGGGGATAACCCGT+TGG - chr7_2:86488876-86488895 Msa1085680:CDS 50.0%
CCATGTAGGACATTCCCAAC+GGG + chr7_2:86488894-86488913 None:intergenic 50.0%
ATGGTAAACGCTACCCACAG+AGG - chr7_2:86488920-86488939 Msa1085680:CDS 50.0%
CCTCTATGGTGTATCCTCTG+TGG + chr7_2:86488937-86488956 None:intergenic 50.0%
CCACAGAGGATACACCATAG+AGG - chr7_2:86488934-86488953 Msa1085680:CDS 50.0%
GTCTTGGTTGGAGCTGTAGT+TGG - chr7_2:86489048-86489067 Msa1085680:CDS 50.0%
TTGGTTGGAGCTGTAGTTGG+TGG - chr7_2:86489051-86489070 Msa1085680:CDS 50.0%
TGGTTGGAGCTGTAGTTGGT+GGG - chr7_2:86489052-86489071 Msa1085680:CDS 50.0%
CAGATTCGTTCCCTGATTCC+AGG - chr7_2:86489088-86489107 Msa1085680:intron 50.0%
AGACTGCTGATAGAAAGGCC+TGG + chr7_2:86489109-86489128 None:intergenic 50.0%
GGCTCAGACTGCTGATAGAA+AGG + chr7_2:86489114-86489133 None:intergenic 50.0%
TATGGCGAGGACGCGAAATG+TGG + chr7_2:86484635-86484654 None:intergenic 55.0%
! GCAAAAGGAGGAGTATGGCG+AGG + chr7_2:86484648-86484667 None:intergenic 55.0%
TTGCTCCGAACAATAGCCGC+CGG - chr7_2:86484664-86484683 Msa1085680:three_prime_UTR 55.0%
ATCGTGATAGTCGTGACCGG+CGG + chr7_2:86484683-86484702 None:intergenic 55.0%
AGTGGAGACGCTGATCAGAC+GGG + chr7_2:86484756-86484775 None:intergenic 55.0%
CAGTGGAGACGCTGATCAGA+CGG + chr7_2:86484757-86484776 None:intergenic 55.0%
! TTTCAGGTGGACTTGACCGG+AGG - chr7_2:86484885-86484904 Msa1085680:CDS 55.0%
CCACAACTGTTGGGAGAGAC+CGG - chr7_2:86485124-86485143 Msa1085680:intron 55.0%
AAGATCGATGGGTCCCATCC+AGG - chr7_2:86485176-86485195 Msa1085680:intron 55.0%
! ATGGTGGTGAGTGTGTGTGC+AGG - chr7_2:86485677-86485696 Msa1085680:intron 55.0%
GGTTGGGACAACAAGCATGC+TGG - chr7_2:86486299-86486318 Msa1085680:intron 55.0%
TGCATTCCCCGTTAGGCATG+TGG - chr7_2:86486565-86486584 Msa1085680:intron 55.0%
GCATTCCCCGTTAGGCATGT+GGG - chr7_2:86486566-86486585 Msa1085680:intron 55.0%
TGAGCACCCACATGCCTAAC+GGG + chr7_2:86486575-86486594 None:intergenic 55.0%
CTGAGCACCCACATGCCTAA+CGG + chr7_2:86486576-86486595 None:intergenic 55.0%
CAGCAGTGACAGCAAGGGAA+AGG + chr7_2:86487758-86487777 None:intergenic 55.0%
GGCCTTTGGTCATGGACACA+TGG + chr7_2:86488261-86488280 None:intergenic 55.0%
! GGTGGGCTTATCTTCAAGGC+TGG - chr7_2:86488481-86488500 Msa1085680:intron 55.0%
GGGCTTATCTTCAAGGCTGG+TGG - chr7_2:86488484-86488503 Msa1085680:intron 55.0%
CAAAAGCCTTGCCAAACGCC+AGG - chr7_2:86488624-86488643 Msa1085680:intron 55.0%
ACGGGGAAATGAAGCTGACC+TGG + chr7_2:86488645-86488664 None:intergenic 55.0%
CCCGTTGGGAATGTCCTACA+TGG - chr7_2:86488891-86488910 Msa1085680:CDS 55.0%
!! GCTGGATGGGCTGAAACTGA+GGG + chr7_2:86488970-86488989 None:intergenic 55.0%
!! GCATCCAATGTGGGCTGGAT+GGG + chr7_2:86488983-86489002 None:intergenic 55.0%
!! TGCATCCAATGTGGGCTGGA+TGG + chr7_2:86488984-86489003 None:intergenic 55.0%
GCTTTGCATCCAATGTGGGC+TGG + chr7_2:86488988-86489007 None:intergenic 55.0%
GCCCACATTGGATGCAAAGC+TGG - chr7_2:86488988-86489007 Msa1085680:CDS 55.0%
AAAGCGAGCAGACCCACAAG+TGG + chr7_2:86489156-86489175 None:intergenic 55.0%
CGTGACCGGCGGCTATTGTT+CGG + chr7_2:86484672-86484691 None:intergenic 60.0%
CGTCTGATCAGCGTCTCCAC+TGG - chr7_2:86484755-86484774 Msa1085680:three_prime_UTR 60.0%
AATGAGGCTTACTCCGGCGG+TGG + chr7_2:86484809-86484828 None:intergenic 60.0%
ACCGGAGGTTACTACGACGC+CGG - chr7_2:86484900-86484919 Msa1085680:CDS 60.0%
CCGGTCTCTCCCAACAGTTG+TGG + chr7_2:86485127-86485146 None:intergenic 60.0%
TGCCACGTCGGATCCTGGAT+GGG + chr7_2:86485192-86485211 None:intergenic 60.0%
! AGTTGCTTTGGGCTGCAGCG+TGG - chr7_2:86486186-86486205 Msa1085680:intron 60.0%
GAGCACCCACATGCCTAACG+GGG + chr7_2:86486574-86486593 None:intergenic 60.0%
!! GTGGCAGTGGTGTCACCACA+TGG + chr7_2:86488592-86488611 None:intergenic 60.0%
GAGTAATGCAGGGGTGGCAG+TGG + chr7_2:86488605-86488624 None:intergenic 60.0%
AGCTGACCTGGCGTTTGGCA+AGG + chr7_2:86488633-86488652 None:intergenic 60.0%
!! GGCTGGATGGGCTGAAACTG+AGG + chr7_2:86488971-86488990 None:intergenic 60.0%
TCAGCCCATCCAGCCCACAT+TGG - chr7_2:86488976-86488995 Msa1085680:CDS 60.0%
TTCCAGAGTCACGGCGCCAG+TGG + chr7_2:86484774-86484793 None:intergenic 65.0%
!! ATTCACGACGGTGCCACCGC+CGG - chr7_2:86484793-86484812 Msa1085680:exon 65.0%
GCCGGCGTCGTAGTAACCTC+CGG + chr7_2:86484904-86484923 None:intergenic 65.0%
GTCCCATCCAGGATCCGACG+TGG - chr7_2:86485187-86485206 Msa1085680:intron 65.0%
CTGCCACGTCGGATCCTGGA+TGG + chr7_2:86485193-86485212 None:intergenic 65.0%
CATCCAGGATCCGACGTGGC+AGG - chr7_2:86485191-86485210 Msa1085680:intron 65.0%
TCACCTGCCACGTCGGATCC+TGG + chr7_2:86485197-86485216 None:intergenic 65.0%
GGCGGTTTCACCTGCCACGT+CGG + chr7_2:86485204-86485223 None:intergenic 65.0%
GGAAGCAGCGGCAAGTGCAG+CGG + chr7_2:86485225-86485244 None:intergenic 65.0%
GGCTGCAGCGTGGTTGCACA+AGG - chr7_2:86486196-86486215 Msa1085680:intron 65.0%
CTCCACTGGCGCCGTGACTC+TGG - chr7_2:86484769-86484788 Msa1085680:three_prime_UTR 70.0%
AGCAGCGGCAAGTGCAGCGG+CGG + chr7_2:86485222-86485241 None:intergenic 70.0%
ATGGGCACACTGCCCGGCGT+AGG + chr7_2:86485746-86485765 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 86484541 86489454 86484541 ID=Msa1085680;Name=Msa1085680
chr7_2 mRNA 86484541 86489454 86484541 ID=Msa1085680-mRNA-1;Parent=Msa1085680;Name=Msa1085680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|1|0.85|1|1|1|7|260|515
chr7_2 exon 86484541 86485127 86484541 ID=Msa1085680-mRNA-1:exon:23421;Parent=Msa1085680-mRNA-1
chr7_2 exon 86485350 86485513 86485350 ID=Msa1085680-mRNA-1:exon:23420;Parent=Msa1085680-mRNA-1
chr7_2 exon 86485847 86485958 86485847 ID=Msa1085680-mRNA-1:exon:23419;Parent=Msa1085680-mRNA-1
chr7_2 exon 86487652 86487813 86487652 ID=Msa1085680-mRNA-1:exon:23418;Parent=Msa1085680-mRNA-1
chr7_2 exon 86488204 86488296 86488204 ID=Msa1085680-mRNA-1:exon:23417;Parent=Msa1085680-mRNA-1
chr7_2 exon 86488691 86489104 86488691 ID=Msa1085680-mRNA-1:exon:23416;Parent=Msa1085680-mRNA-1
chr7_2 exon 86489179 86489454 86489179 ID=Msa1085680-mRNA-1:exon:23415;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86489179 86489454 86489179 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86488691 86489104 86488691 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86488204 86488296 86488204 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86487652 86487813 86487652 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86485847 86485958 86485847 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86485350 86485513 86485350 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 CDS 86484801 86485127 86484801 ID=Msa1085680-mRNA-1:cds;Parent=Msa1085680-mRNA-1
chr7_2 three_prime_UTR 86484541 86484800 86484541 ID=Msa1085680-mRNA-1:three_prime_utr;Parent=Msa1085680-mRNA-1
Gene Sequence

>Msa1085680

TTGCTCAAACACATTACTCTTCACCCACAGGGTTATAGTTGGAAGAAAGAAAAAAACAGAAAAATGGCGCGAAATGCTTTATCTTCTATTACCACATTTCGCGTCCTCGCCATACTCCTCCTTTTGCTCCGAACAATAGCCGCCGGTCACGACTATCACGATGCTCTCCGTAAGAGCATTCTTTTCTTTGAAGGACAACGCTCTGGCAAACTCCCGTCTGATCAGCGTCTCCACTGGCGCCGTGACTCTGGAATTCACGACGGTGCCACCGCCGGAGTGGACTTGACCGGAGGTTACTACGACGCCGGCGACAACATAAAGTTCGGGTTTCCGTTGGCGTTTACAACGACGATGTTAGCTTGGAGTGTGATTGATTTTGGAAGAGTAATGGGACCTGAGCTAGGTAACGCGTTGAAATCAGTGAGGTGGGGAACGGACTATCTTTTAAAGGCGACGTCAAATATAGGTTCCGGCGTGGTGTTTGTTCAAGTCGGTGATCCTTTATCGGACCACAACTGTTGGGAGAGACCGGAAGATATGGATACGTTACGCACAGTTTACAAGATCGATGGGTCCCATCCAGGATCCGACGTGGCAGGTGAAACCGCCGCTGCACTTGCCGCTGCTTCCATCGTGTTCAGATCACGTGATCCTGCTTACTCTAAATTGCTTCTCAATCGTGCCGTTACGGTGTTTGAGTTTGCTGACAGACATCGTGGTGCATACAGTAACAGCCTACGCCGGGCAGTGTGCCCATTTTACTGTGATGTAAACGGTTATCAGGATGAGTTGCTTTGGGCTGCAGCGTGGTTGCACAAGGCCTCGCGTAGACGTCTATACAGAGAATACATTATTCGTAACGAGGTTGTTTTGAGAGCTGGTGACACCATTAATGAGTTTGGTTGGGACAACAAGCATGCTGGGATTAATGTCCTCATTTCTAAGGAGGTGTTAATGGGAAGAGCAAATTATTTTTCTTCGTTCAAACGAAATGCAGATGAATTTATTTGTTCAACATTGCCTGGATTTTCTCACGCACAAGTTCAATATTCCCCAGGTGGGCTTATCTTCAAGGCTGGTGGAAGTAACATGCAACATGTAACGTCCTTGTCCTTCCTGTTACTAGCTTATTCCAATTACCTAAGCCATGCCAATAAGGTTGTGCCATGTGGTGACACCACTGCCACCCCTGCATTACTCAAAAGCCTTGCCAAACGCCAGGTTAACTACATTCTTGGGGATAACCCGTTGGGAATGTCCTACATGGTTGGTTATGGTAAACGCTACCCACAGAGGATACACCATAGAGGAAGCTCAATTCCCTCAGTTTCAGCCCATCCAGCCCACATTGGATGCAAAGCTGGATCTCAATATTTCTTCAGCCCAAACCCTAACCCAAATGTCTTGGTTGGAGCTGTAGTTGGTGGGCCTACCAACACTACAGATTCGTTCCCTGATTCCAGGCCTTTCTATCAGCAGTCTGAGCCCACGACATATATCAATGCACCACTTGTGGGTCTGCTCGCTTTCTTTTCAGCTCATCCTTGA
Protein sequence

>Msa1085680

LLKHITLHPQGYSWKKEKNRKMARNALSSITTFRVLAILLLLLRTIAAGHDYHDALRKSILFFEGQRSGKLPSDQRLHWRRDSGIHDGATAGVDLTGGYYDAGDNIKFGFPLAFTTTMLAWSVIDFGRVMGPELGNALKSVRWGTDYLLKATSNIGSGVVFVQVGDPLSDHNCWERPEDMDTLRTVYKIDGSHPGSDVAGETAAALAAASIVFRSRDPAYSKLLLNRAVTVFEFADRHRGAYSNSLRRAVCPFYCDVNGYQDELLWAAAWLHKASRRRLYREYIIRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFSSFKRNADEFICSTLPGFSHAQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGDTTATPALLKSLAKRQVNYILGDNPLGMSYMVGYGKRYPQRIHHRGSSIPSVSAHPAHIGCKAGSQYFFSPNPNPNVLVGAVVGGPTNTTDSFPDSRPFYQQSEPTTYINAPLVGLLAFFSAHP*