Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314400 | XP_040995868.1 | 76.087 | 92 | 21 | 1 | 20 | 111 | 10 | 100 | 5.76e-37 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314400 | sp|Q10NY2|TPR3_ORYSJ | 73.913 | 92 | 23 | 1 | 20 | 111 | 79 | 169 | 6.50e-36 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0314400 | Msa0323870 | 0.817801 | 2.731557e-52 | -8.615850e-47 |
| Msa0314400 | Msa0531890 | 0.847081 | 1.449241e-59 | -8.615850e-47 |
| Msa0314400 | Msa0604210 | 0.814599 | 1.419101e-51 | -8.615850e-47 |
| Msa0314400 | Msa0679300 | 0.826066 | 3.326521e-54 | -8.615850e-47 |
| Msa0314400 | Msa0817220 | 0.852887 | 3.437700e-61 | -8.615850e-47 |
| Msa0314400 | Msa0826100 | 0.808787 | 2.609071e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314400 | MtrunA17_Chr4g0003011 | 76.087 | 92 | 21 | 1 | 20 | 111 | 79 | 169 | 2.70e-38 | 138 |
| Msa0314400 | MtrunA17_Chr2g0333311 | 75.000 | 92 | 22 | 1 | 20 | 111 | 79 | 169 | 2.63e-37 | 135 |
| Msa0314400 | MtrunA17_Chr4g0064101 | 84.286 | 70 | 11 | 0 | 42 | 111 | 100 | 169 | 1.92e-34 | 127 |
| Msa0314400 | MtrunA17_Chr7g0271991 | 67.391 | 92 | 29 | 1 | 20 | 111 | 79 | 169 | 2.35e-32 | 121 |
| Msa0314400 | MtrunA17_Chr1g0192431 | 66.304 | 92 | 30 | 1 | 20 | 111 | 79 | 169 | 4.33e-32 | 120 |
| Msa0314400 | MtrunA17_Chr4g0067791 | 67.391 | 92 | 29 | 1 | 20 | 111 | 79 | 169 | 1.34e-31 | 119 |
| Msa0314400 | MtrunA17_Chr1g0149531 | 49.275 | 69 | 35 | 0 | 40 | 108 | 32 | 100 | 2.53e-17 | 73.2 |
| Msa0314400 | MtrunA17_Chr2g0310451 | 43.478 | 69 | 39 | 0 | 42 | 110 | 76 | 144 | 3.78e-15 | 70.5 |
| Msa0314400 | MtrunA17_Chr2g0295261 | 44.286 | 70 | 39 | 0 | 42 | 111 | 31 | 100 | 3.31e-14 | 67.4 |
| Msa0314400 | MtrunA17_Chr1g0153401 | 37.363 | 91 | 56 | 1 | 20 | 110 | 81 | 170 | 6.40e-12 | 60.5 |
| Msa0314400 | MtrunA17_Chr7g0255431 | 44.737 | 76 | 37 | 1 | 5 | 80 | 400 | 470 | 1.49e-11 | 61.6 |
| Msa0314400 | MtrunA17_Chr2g0295291 | 45.205 | 73 | 27 | 2 | 42 | 114 | 35 | 94 | 3.03e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314400 | AT1G15750.3 | 72.826 | 92 | 24 | 1 | 20 | 111 | 79 | 169 | 7.87e-37 | 134 |
| Msa0314400 | AT1G15750.1 | 72.826 | 92 | 24 | 1 | 20 | 111 | 79 | 169 | 7.87e-37 | 134 |
| Msa0314400 | AT1G15750.2 | 72.826 | 92 | 24 | 1 | 20 | 111 | 79 | 169 | 7.87e-37 | 134 |
| Msa0314400 | AT1G15750.4 | 72.826 | 92 | 24 | 1 | 20 | 111 | 79 | 169 | 7.87e-37 | 134 |
| Msa0314400 | AT1G80490.1 | 71.739 | 92 | 25 | 1 | 20 | 111 | 79 | 169 | 6.61e-36 | 131 |
| Msa0314400 | AT1G80490.3 | 71.739 | 92 | 25 | 1 | 20 | 111 | 79 | 169 | 6.61e-36 | 131 |
| Msa0314400 | AT1G80490.2 | 71.739 | 92 | 25 | 1 | 20 | 111 | 79 | 169 | 6.61e-36 | 131 |
| Msa0314400 | AT3G15880.2 | 69.565 | 92 | 27 | 1 | 20 | 111 | 79 | 169 | 2.43e-33 | 124 |
| Msa0314400 | AT3G15880.3 | 69.565 | 92 | 27 | 1 | 20 | 111 | 79 | 169 | 2.45e-33 | 124 |
| Msa0314400 | AT3G15880.1 | 69.565 | 92 | 27 | 1 | 20 | 111 | 79 | 169 | 2.55e-33 | 124 |
| Msa0314400 | AT3G15880.4 | 69.565 | 92 | 27 | 1 | 20 | 111 | 79 | 169 | 2.55e-33 | 124 |
| Msa0314400 | AT3G16830.1 | 66.304 | 92 | 30 | 1 | 20 | 111 | 79 | 169 | 1.20e-31 | 119 |
| Msa0314400 | AT5G27030.1 | 65.217 | 92 | 31 | 1 | 20 | 111 | 79 | 169 | 1.94e-31 | 119 |
| Msa0314400 | AT5G27030.2 | 65.217 | 92 | 31 | 1 | 20 | 111 | 79 | 169 | 1.95e-31 | 119 |
Find 21 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTTGTCAGGAAATAA+TGG | 0.201777 | 2_4:-10155414 | None:intergenic |
| TCAGTTTGTTGTAGTATAAC+TGG | 0.284065 | 2_4:-10154920 | None:intergenic |
| GTGCATTCTTTAGATACTTT+GGG | 0.291528 | 2_4:+10154842 | Msa0314400:intron |
| AGAAGAATAAGAAACTCTTT+TGG | 0.315159 | 2_4:+10158430 | Msa0314400:CDS |
| TGTGCATTCTTTAGATACTT+TGG | 0.325330 | 2_4:+10154841 | Msa0314400:intron |
| AATGAACAGTTGTCAAAGTA+TGG | 0.361823 | 2_4:+10155330 | Msa0314400:CDS |
| TTAGGAAATTGCAATTTGTC+AGG | 0.408882 | 2_4:-10155423 | None:intergenic |
| GTTTAATGAAGAATTGTTCA+AGG | 0.447430 | 2_4:+10155186 | Msa0314400:CDS |
| TTTGTCAGGAAATAATGGAT+TGG | 0.495789 | 2_4:-10155409 | None:intergenic |
| GGGCTCCACATGACTTGGAC+AGG | 0.502000 | 2_4:+10154862 | Msa0314400:CDS |
| ACTTTGGGCTCCACATGACT+TGG | 0.511277 | 2_4:+10154857 | Msa0314400:CDS |
| CACATGACTTGGACAGGAAG+TGG | 0.522353 | 2_4:+10154868 | Msa0314400:CDS |
| GTCTGCGCGGGCAGTCATGT+TGG | 0.522666 | 2_4:+10155362 | Msa0314400:CDS |
| GCGGGCAGTCATGTTGGTTG+AGG | 0.530417 | 2_4:+10155368 | Msa0314400:CDS |
| AGTGGTTGCTTCTTCAGAAG+TGG | 0.532857 | 2_4:+10154886 | Msa0314400:CDS |
| CACTTCCTGTCCAAGTCATG+TGG | 0.569261 | 2_4:-10154867 | None:intergenic |
| AATCGCACAGCTATTGACAT+TGG | 0.587279 | 2_4:+10155210 | Msa0314400:CDS |
| TTACACTACAAGGGCAGACA+AGG | 0.587331 | 2_4:+10158501 | Msa0314400:CDS |
| TGGTGATACTAAGTCTGCGC+GGG | 0.592019 | 2_4:+10155350 | Msa0314400:CDS |
| TAGACACTAATACAAACGAT+AGG | 0.616314 | 2_4:-10158468 | None:intergenic |
| ATGGTGATACTAAGTCTGCG+CGG | 0.743006 | 2_4:+10155349 | Msa0314400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTTATATGTACTT+AGG | + | chr2_4:10152124-10152143 | Msa0314400:intron | 10.0% |
| !! | TATTTATTTATATGTACTTA+GGG | + | chr2_4:10152125-10152144 | Msa0314400:intron | 10.0% |
| !! | ACTAAAATTAATACAAAAAA+AGG | - | chr2_4:10152939-10152958 | None:intergenic | 10.0% |
| !! | CAATATATTAACAAAATAAA+AGG | - | chr2_4:10154779-10154798 | None:intergenic | 10.0% |
| !!! | TAAAATATTTTTAAACAGTA+TGG | + | chr2_4:10156659-10156678 | Msa0314400:intron | 10.0% |
| !! | AACTATATTAATTACATATA+AGG | - | chr2_4:10157546-10157565 | None:intergenic | 10.0% |
| !!! | TAATTAATATAGTTTTCATT+AGG | + | chr2_4:10157552-10157571 | Msa0314400:intron | 10.0% |
| !!! | AATTAATATAGTTTTCATTA+GGG | + | chr2_4:10157553-10157572 | Msa0314400:intron | 10.0% |
| !!! | TTATATGTTTAGTTTGATTA+TGG | + | chr2_4:10152670-10152689 | Msa0314400:intron | 15.0% |
| !!! | TTTTTGGAAATTTTATTGTA+TGG | + | chr2_4:10152773-10152792 | Msa0314400:intron | 15.0% |
| !!! | AAAGTTTTTATAAAAACCAA+TGG | - | chr2_4:10152848-10152867 | None:intergenic | 15.0% |
| !!! | TTTTTATAAAAACTTTTCCT+TGG | + | chr2_4:10152852-10152871 | Msa0314400:intron | 15.0% |
| !!! | AGTTTTTTTTTCCATTTTAA+TGG | + | chr2_4:10153321-10153340 | Msa0314400:intron | 15.0% |
| !!! | AGCATAAAAAACTTTTATTT+TGG | - | chr2_4:10153759-10153778 | None:intergenic | 15.0% |
| !!! | TTTCTATATTGTATTTTGTT+TGG | + | chr2_4:10154261-10154280 | Msa0314400:intron | 15.0% |
| !! | TCTAAATATTGTATTTGTAT+AGG | + | chr2_4:10155107-10155126 | Msa0314400:intron | 15.0% |
| !!! | TCAAAGTTAATATTTTCTTA+TGG | + | chr2_4:10155479-10155498 | Msa0314400:intron | 15.0% |
| !! | GTTTAATCATTAAATCTATT+GGG | - | chr2_4:10155757-10155776 | None:intergenic | 15.0% |
| !! | AGTTTAATCATTAAATCTAT+TGG | - | chr2_4:10155758-10155777 | None:intergenic | 15.0% |
| !!! | TAGTTTTGATTTTTACTATT+TGG | + | chr2_4:10156777-10156796 | Msa0314400:intron | 15.0% |
| !! | GAATAACAAACTTAAATTAT+AGG | - | chr2_4:10156978-10156997 | None:intergenic | 15.0% |
| !!! | GTTTGTTATTCATATATTTT+AGG | + | chr2_4:10156987-10157006 | Msa0314400:intron | 15.0% |
| !!! | AAAATTAGATTCTAAGATTT+TGG | - | chr2_4:10157188-10157207 | None:intergenic | 15.0% |
| !!! | TTATTAGTTTTTATTGCATT+AGG | - | chr2_4:10157825-10157844 | None:intergenic | 15.0% |
| !! | TAATGCAATAAAAACTAATA+AGG | + | chr2_4:10157824-10157843 | Msa0314400:intron | 15.0% |
| !! | AATTGACAGATAATATTAAT+TGG | + | chr2_4:10158278-10158297 | Msa0314400:intron | 15.0% |
| !!! | TGTTTTATTGCAATATAAAA+AGG | - | chr2_4:10158405-10158424 | None:intergenic | 15.0% |
| !!! | TTTTTATATTGCAATAAAAC+AGG | + | chr2_4:10158404-10158423 | Msa0314400:intron | 15.0% |
| !! | ATAAAAAAAAAACCTGAAGA+GGG | - | chr2_4:10151738-10151757 | None:intergenic | 20.0% |
| !! | AATAAAAAAAAAACCTGAAG+AGG | - | chr2_4:10151739-10151758 | None:intergenic | 20.0% |
| !!! | TTGATGTTGAATTATTTTCT+GGG | + | chr2_4:10151771-10151790 | Msa0314400:intron | 20.0% |
| !!! | TATGAATTTGAATGTTGTTT+TGG | + | chr2_4:10151949-10151968 | Msa0314400:intron | 20.0% |
| !! | TGTGGTAGATATAAATAATT+TGG | + | chr2_4:10152055-10152074 | Msa0314400:intron | 20.0% |
| !!! | AATAATTTTTCATAATGCCT+TGG | + | chr2_4:10152099-10152118 | Msa0314400:intron | 20.0% |
| !!! | ATAATTTTTCATAATGCCTT+GGG | + | chr2_4:10152100-10152119 | Msa0314400:intron | 20.0% |
| !! | CATATAAATAAATATTCCCA+AGG | - | chr2_4:10152119-10152138 | None:intergenic | 20.0% |
| !!! | CATTTTGGTTTGAATTAATA+TGG | + | chr2_4:10152389-10152408 | Msa0314400:intron | 20.0% |
| !!! | GAAATTGAAATTGTTGATAA+TGG | + | chr2_4:10152417-10152436 | Msa0314400:intron | 20.0% |
| !! | TTTGAAAAGTTTATTGCTAA+AGG | + | chr2_4:10152496-10152515 | Msa0314400:intron | 20.0% |
| !!! | AATTATTTGCTTTTGTTATC+TGG | - | chr2_4:10152597-10152616 | None:intergenic | 20.0% |
| !! | TTGATACATTGAATATTCTT+TGG | + | chr2_4:10152805-10152824 | Msa0314400:intron | 20.0% |
| !!! | TTTTTTTTCCATTTTAATGG+AGG | + | chr2_4:10153324-10153343 | Msa0314400:intron | 20.0% |
| !!! | GTAAACAATCATATGATTTT+TGG | - | chr2_4:10153890-10153909 | None:intergenic | 20.0% |
| !!! | TTACCCTTATTTTCATAATA+TGG | + | chr2_4:10154559-10154578 | Msa0314400:intron | 20.0% |
| !! | ACTCCATATTATGAAAATAA+GGG | - | chr2_4:10154565-10154584 | None:intergenic | 20.0% |
| !! | AACTCCATATTATGAAAATA+AGG | - | chr2_4:10154566-10154585 | None:intergenic | 20.0% |
| !! | AAAAACATTATAGCTTGAAT+TGG | + | chr2_4:10155678-10155697 | Msa0314400:intron | 20.0% |
| !!! | AGTAATTGAATGATGATTTT+AGG | + | chr2_4:10155728-10155747 | Msa0314400:intron | 20.0% |
| !!! | TAATCATCAATTTAGAATCA+AGG | - | chr2_4:10155805-10155824 | None:intergenic | 20.0% |
| !!! | AATTGATGATTAAACTGATT+TGG | + | chr2_4:10155813-10155832 | Msa0314400:intron | 20.0% |
| !!! | ATTGATGATTAAACTGATTT+GGG | + | chr2_4:10155814-10155833 | Msa0314400:intron | 20.0% |
| !!! | CTTTTTGTAATCTAGAAATT+TGG | + | chr2_4:10156509-10156528 | Msa0314400:intron | 20.0% |
| !!! | TTTAAAACTTATCATGTTGT+TGG | + | chr2_4:10156738-10156757 | Msa0314400:intron | 20.0% |
| !!! | TTGTTAGTTTTTATTGCATT+AGG | - | chr2_4:10157217-10157236 | None:intergenic | 20.0% |
| !! | TTAGAAAATAGAAAGCAAAA+TGG | - | chr2_4:10157753-10157772 | None:intergenic | 20.0% |
| !!! | TATTTTCTAATCCATTTGAA+AGG | + | chr2_4:10157763-10157782 | Msa0314400:intron | 20.0% |
| !! | ACTTTCACTAGAAAAATTAT+TGG | + | chr2_4:10157993-10158012 | Msa0314400:intron | 20.0% |
| !! | TAACACAAAACGAAAATATT+TGG | + | chr2_4:10158085-10158104 | Msa0314400:intron | 20.0% |
| !! | AAATTAAGGGAAAAATATGT+AGG | - | chr2_4:10158171-10158190 | None:intergenic | 20.0% |
| !! | CTTGATGTTGAATTATTTTC+TGG | + | chr2_4:10151770-10151789 | Msa0314400:intron | 25.0% |
| ! | TGTTCATCACAACAAATATT+AGG | + | chr2_4:10151861-10151880 | Msa0314400:intron | 25.0% |
| !! | TATATTCACTTTCTTTTCTC+TGG | + | chr2_4:10152218-10152237 | Msa0314400:intron | 25.0% |
| ! | CATGTGTTTATGTAGATAAA+AGG | - | chr2_4:10152360-10152379 | None:intergenic | 25.0% |
| ! | TGGTTATGATTCTGATTATT+TGG | + | chr2_4:10152437-10152456 | Msa0314400:intron | 25.0% |
| ! | ATTGCTAAAGGTAATAACTT+TGG | + | chr2_4:10152508-10152527 | Msa0314400:intron | 25.0% |
| !! | TACGTATGATGATGAAAATT+TGG | + | chr2_4:10152695-10152714 | Msa0314400:intron | 25.0% |
| !!! | GGTATTGAAAATTTTGGTAA+TGG | + | chr2_4:10152722-10152741 | Msa0314400:intron | 25.0% |
| !! | TAGGACAACTCATTTAAAAT+AGG | + | chr2_4:10153209-10153228 | Msa0314400:intron | 25.0% |
| !!! | ACATTTTGAAATGACACATT+AGG | + | chr2_4:10153353-10153372 | Msa0314400:intron | 25.0% |
| ! | TGCTTAACATAATTAAACTG+AGG | + | chr2_4:10153489-10153508 | Msa0314400:intron | 25.0% |
| !! | GAATATCAAAGCACTTAAAA+TGG | - | chr2_4:10153621-10153640 | None:intergenic | 25.0% |
| ! | GATAATAATAATATCAGGAC+AGG | - | chr2_4:10153973-10153992 | None:intergenic | 25.0% |
| ! | GCACAGATAATAATAATATC+AGG | - | chr2_4:10153978-10153997 | None:intergenic | 25.0% |
| ! | GAAATTGAATTCTCACATTA+CGG | - | chr2_4:10154238-10154257 | None:intergenic | 25.0% |
| !!! | CTATATTGTATTTTGTTTGG+TGG | + | chr2_4:10154264-10154283 | Msa0314400:intron | 25.0% |
| ! | GTTTAATGAAGAATTGTTCA+AGG | + | chr2_4:10155186-10155205 | Msa0314400:CDS | 25.0% |
| !! | TATTGACATTGGAGAATTTT+AGG | + | chr2_4:10155221-10155240 | Msa0314400:CDS | 25.0% |
| ! | ACATCTTACAAACTGAAAAT+AGG | - | chr2_4:10155280-10155299 | None:intergenic | 25.0% |
| ! | TAATAATAACCCAAACTCAA+TGG | - | chr2_4:10155305-10155324 | None:intergenic | 25.0% |
| !! | ATTGAGTTTGGGTTATTATT+AGG | + | chr2_4:10155304-10155323 | Msa0314400:intron | 25.0% |
| !! | TTGAGTTTGGGTTATTATTA+GGG | + | chr2_4:10155305-10155324 | Msa0314400:intron | 25.0% |
| !!! | AACATTGAGTTTTTTAGGTT+AGG | - | chr2_4:10155444-10155463 | None:intergenic | 25.0% |
| ! | ACCTAAAAAACTCAATGTTA+AGG | + | chr2_4:10155445-10155464 | Msa0314400:intron | 25.0% |
| !!! | TCCTTAACATTGAGTTTTTT+AGG | - | chr2_4:10155449-10155468 | None:intergenic | 25.0% |
| ! | TAAAAAAAGCAATGCAGTAT+AGG | + | chr2_4:10156341-10156360 | Msa0314400:intron | 25.0% |
| ! | TAATTGATGAATCACAATGA+CGG | + | chr2_4:10156448-10156467 | Msa0314400:intron | 25.0% |
| ! | AATTTGGTCATATGATTCTT+TGG | + | chr2_4:10156525-10156544 | Msa0314400:intron | 25.0% |
| ! | TCAACAATTTACTCAATTGT+AGG | - | chr2_4:10156837-10156856 | None:intergenic | 25.0% |
| ! | AAAAGATGATGATTGTACAA+AGG | + | chr2_4:10157315-10157334 | Msa0314400:intron | 25.0% |
| ! | AAAGATGATGATTGTACAAA+GGG | + | chr2_4:10157316-10157335 | Msa0314400:intron | 25.0% |
| ! | AACTATAAGACATATTTGCT+TGG | + | chr2_4:10157440-10157459 | Msa0314400:intron | 25.0% |
| !!! | ATTAGCTTAACCTTTTTTAC+TGG | - | chr2_4:10157708-10157727 | None:intergenic | 25.0% |
| !!! | TAATTTTTCTAGTGAAAGTC+AGG | - | chr2_4:10157992-10158011 | None:intergenic | 25.0% |
| !!! | TGTTAACCTTTGGTTTTTAA+GGG | - | chr2_4:10158070-10158089 | None:intergenic | 25.0% |
| !! | GTATACGGATGATTAATTTT+AGG | - | chr2_4:10158137-10158156 | None:intergenic | 25.0% |
| !!! | TAGGAAAGAAGTATTGTATA+CGG | - | chr2_4:10158152-10158171 | None:intergenic | 25.0% |
| !!! | ATATTTGTTTTTGCTTACAG+TGG | + | chr2_4:10158255-10158274 | Msa0314400:intron | 25.0% |
| ! | ATTAATTGGACTATCATTCT+TGG | + | chr2_4:10158292-10158311 | Msa0314400:intron | 25.0% |
| ! | CAATATACTTGGTTACATAA+AGG | - | chr2_4:10158322-10158341 | None:intergenic | 25.0% |
| ! | AAATGGAAATGAAGAGAAAA+GGG | - | chr2_4:10158363-10158382 | None:intergenic | 25.0% |
| ! | TAAATGGAAATGAAGAGAAA+AGG | - | chr2_4:10158364-10158383 | None:intergenic | 25.0% |
| !! | AGAAGAATAAGAAACTCTTT+TGG | + | chr2_4:10158430-10158449 | Msa0314400:CDS | 25.0% |
| !! | GAAGAATAAGAAACTCTTTT+GGG | + | chr2_4:10158431-10158450 | Msa0314400:CDS | 25.0% |
| !! | TTTTTCTGTTTACACTACAA+GGG | + | chr2_4:10158492-10158511 | Msa0314400:CDS | 25.0% |
| ACTTGCATGTGATTTATGTT+TGG | + | chr2_4:10151811-10151830 | Msa0314400:intron | 30.0% | |
| CTTGCATGTGATTTATGTTT+GGG | + | chr2_4:10151812-10151831 | Msa0314400:intron | 30.0% | |
| TTGCATGTGATTTATGTTTG+GGG | + | chr2_4:10151813-10151832 | Msa0314400:intron | 30.0% | |
| ! | TAGGTTTGAAATAGAAACCT+TGG | + | chr2_4:10151880-10151899 | Msa0314400:intron | 30.0% |
| ! | AGGTTTGAAATAGAAACCTT+GGG | + | chr2_4:10151881-10151900 | Msa0314400:intron | 30.0% |
| !! | TTGATGTTGATTGCTTTTCT+GGG | + | chr2_4:10151915-10151934 | Msa0314400:intron | 30.0% |
| TTGTGGAAAACAAGTGTATT+TGG | + | chr2_4:10151992-10152011 | Msa0314400:intron | 30.0% | |
| TGTGGAAAACAAGTGTATTT+GGG | + | chr2_4:10151993-10152012 | Msa0314400:intron | 30.0% | |
| AAGAAGATCAGTTACATATG+TGG | + | chr2_4:10152037-10152056 | Msa0314400:intron | 30.0% | |
| !!! | TTCTTTTCTCTGGTTTTGTT+TGG | + | chr2_4:10152228-10152247 | Msa0314400:intron | 30.0% |
| TATACCTATAATTTGAGTCC+TGG | - | chr2_4:10152325-10152344 | None:intergenic | 30.0% | |
| ! | CACATGTTCTGATTTCATTT+TGG | + | chr2_4:10152374-10152393 | Msa0314400:intron | 30.0% |
| GCTATATGTAGCAATGAATA+TGG | + | chr2_4:10152530-10152549 | Msa0314400:intron | 30.0% | |
| ! | TGATGATGAAAATTTGGCAA+TGG | + | chr2_4:10152701-10152720 | Msa0314400:intron | 30.0% |
| !! | GGCAATGGTATTGAAAATTT+TGG | + | chr2_4:10152716-10152735 | Msa0314400:intron | 30.0% |
| !!! | TTGATGCTGATACTGTTTTT+TGG | + | chr2_4:10152757-10152776 | Msa0314400:intron | 30.0% |
| ! | GGAAATTTTATTGTATGGTG+AGG | + | chr2_4:10152778-10152797 | Msa0314400:intron | 30.0% |
| !! | TAAGCAACATGATTGATTTG+TGG | + | chr2_4:10153049-10153068 | Msa0314400:intron | 30.0% |
| ! | ATACTGCTTCATATTTTCTC+AGG | - | chr2_4:10153163-10153182 | None:intergenic | 30.0% |
| GAGAAAATATGAAGCAGTAT+TGG | + | chr2_4:10153163-10153182 | Msa0314400:intron | 30.0% | |
| !!! | AAGCAGTATTGGTTTTACAT+AGG | + | chr2_4:10153174-10153193 | Msa0314400:intron | 30.0% |
| !!! | AGCAGTATTGGTTTTACATA+GGG | + | chr2_4:10153175-10153194 | Msa0314400:intron | 30.0% |
| ! | ACATAGGGTCAGTTAATTTT+AGG | + | chr2_4:10153190-10153209 | Msa0314400:intron | 30.0% |
| ! | TTTAAAATAGGACACCTAGA+AGG | + | chr2_4:10153221-10153240 | Msa0314400:intron | 30.0% |
| GGGATTGAAAATCTTCATAT+TGG | + | chr2_4:10153257-10153276 | Msa0314400:intron | 30.0% | |
| ! | GTTGATTTCCTCCATTAAAA+TGG | - | chr2_4:10153335-10153354 | None:intergenic | 30.0% |
| AGTACAATGTACAACAGAAA+TGG | - | chr2_4:10153563-10153582 | None:intergenic | 30.0% | |
| TAGTGTATAAAACTGTCGAA+AGG | + | chr2_4:10153780-10153799 | Msa0314400:intron | 30.0% | |
| GAGAGGTAATTATACTACAA+CGG | - | chr2_4:10153932-10153951 | None:intergenic | 30.0% | |
| !! | ATCGATTAGTTTGCAATGAT+TGG | + | chr2_4:10154016-10154035 | Msa0314400:intron | 30.0% |
| AATTTCCCAAAATAAAGAGC+AGG | + | chr2_4:10154431-10154450 | Msa0314400:intron | 30.0% | |
| CCAAAAATCTGACAATATCA+TGG | - | chr2_4:10154470-10154489 | None:intergenic | 30.0% | |
| ! | CCATGATATTGTCAGATTTT+TGG | + | chr2_4:10154467-10154486 | Msa0314400:intron | 30.0% |
| ! | TGACATCTAATTTTTGCATG+TGG | - | chr2_4:10154500-10154519 | None:intergenic | 30.0% |
| ! | TTCCTTTTATTGCCATGTAT+CGG | + | chr2_4:10154600-10154619 | Msa0314400:intron | 30.0% |
| TGTTGTTCTTATCCTAGAAT+AGG | - | chr2_4:10154707-10154726 | None:intergenic | 30.0% | |
| !!! | ACCTTATGCCATTTTAGAAT+AGG | - | chr2_4:10154735-10154754 | None:intergenic | 30.0% |
| !! | GGAGAGTTTTTAGATGTTAT+AGG | - | chr2_4:10154809-10154828 | None:intergenic | 30.0% |
| GAATGCACATGCAATAAAAT+TGG | - | chr2_4:10154830-10154849 | None:intergenic | 30.0% | |
| TGTGCATTCTTTAGATACTT+TGG | + | chr2_4:10154841-10154860 | Msa0314400:intron | 30.0% | |
| GTGCATTCTTTAGATACTTT+GGG | + | chr2_4:10154842-10154861 | Msa0314400:intron | 30.0% | |
| !! | TCAGTTTGTTGTAGTATAAC+TGG | - | chr2_4:10154923-10154942 | None:intergenic | 30.0% |
| CTGCAATTAAAAGGATTATG+AGG | - | chr2_4:10155002-10155021 | None:intergenic | 30.0% | |
| TGTTCACAACTGCAATTAAA+AGG | - | chr2_4:10155011-10155030 | None:intergenic | 30.0% | |
| TCAAACTAAAATTCTGAGCA+TGG | - | chr2_4:10155045-10155064 | None:intergenic | 30.0% | |
| TGTATTTGTATAGGCATGAT+CGG | + | chr2_4:10155116-10155135 | Msa0314400:intron | 30.0% | |
| AATGAACAGTTGTCAAAGTA+TGG | + | chr2_4:10155330-10155349 | Msa0314400:CDS | 30.0% | |
| !! | TTTGTCAGGAAATAATGGAT+TGG | - | chr2_4:10155412-10155431 | None:intergenic | 30.0% |
| TGCAATTTGTCAGGAAATAA+TGG | - | chr2_4:10155417-10155436 | None:intergenic | 30.0% | |
| TTAGGAAATTGCAATTTGTC+AGG | - | chr2_4:10155426-10155445 | None:intergenic | 30.0% | |
| CTTATGGTTCAATTCTTCAA+CGG | + | chr2_4:10155495-10155514 | Msa0314400:intron | 30.0% | |
| !! | TTGTTTAGGTTGTGTTCTAT+TGG | + | chr2_4:10155629-10155648 | Msa0314400:intron | 30.0% |
| !! | AATTTTGACATGTTTCATGC+AGG | + | chr2_4:10155861-10155880 | Msa0314400:intron | 30.0% |
| ATGTTTCATGCAGGAAAATT+GGG | + | chr2_4:10155870-10155889 | Msa0314400:intron | 30.0% | |
| TGTTTGTGAGTCAATTATGA+TGG | + | chr2_4:10155923-10155942 | Msa0314400:intron | 30.0% | |
| TTAGCAAATACATGTATGAC+AGG | + | chr2_4:10155947-10155966 | Msa0314400:intron | 30.0% | |
| CTGTTCAATTCAGTATAGAA+TGG | + | chr2_4:10156096-10156115 | Msa0314400:intron | 30.0% | |
| !!! | TTATTTCCCCAAGTTTTGTT+TGG | + | chr2_4:10156123-10156142 | Msa0314400:intron | 30.0% |
| !!! | TTTAGAGCATGTGTTTTTTG+TGG | + | chr2_4:10156203-10156222 | Msa0314400:intron | 30.0% |
| GCAAAATTGACGAATTAGTT+TGG | + | chr2_4:10156291-10156310 | Msa0314400:intron | 30.0% | |
| !!! | ACTGCATTGCTTTTTTTAGT+GGG | - | chr2_4:10156339-10156358 | None:intergenic | 30.0% |
| !!! | TACTGCATTGCTTTTTTTAG+TGG | - | chr2_4:10156340-10156359 | None:intergenic | 30.0% |
| !!! | ATGATTCTTTGGTTTTGTTC+TGG | + | chr2_4:10156536-10156555 | Msa0314400:intron | 30.0% |
| AATCAACCACTATAGTTTGA+AGG | - | chr2_4:10156703-10156722 | None:intergenic | 30.0% | |
| ! | CATGTTGTTGGTTATATGTT+TGG | + | chr2_4:10156750-10156769 | Msa0314400:intron | 30.0% |
| TTTACTCAATTGTAGGTGAA+CGG | - | chr2_4:10156830-10156849 | None:intergenic | 30.0% | |
| ! | TTTTCTTTCCTTCTAGACTA+AGG | + | chr2_4:10156914-10156933 | Msa0314400:intron | 30.0% |
| ATGATATACCTTAGTCTAGA+AGG | - | chr2_4:10156925-10156944 | None:intergenic | 30.0% | |
| ! | AAAACTAACAAGAGCTTTAG+TGG | + | chr2_4:10157085-10157104 | Msa0314400:intron | 30.0% |
| ! | AAACTAACAAGAGCTTTAGT+GGG | + | chr2_4:10157086-10157105 | Msa0314400:intron | 30.0% |
| !! | AATTTCTAGAACACGTTTAC+TGG | - | chr2_4:10157136-10157155 | None:intergenic | 30.0% |
| !! | GTAAACGTGTTCTAGAAATT+AGG | + | chr2_4:10157136-10157155 | Msa0314400:intron | 30.0% |
| ! | AAAACTAACAAGAGCTTTAG+TGG | + | chr2_4:10157085-10157104 | Msa0314400:intron | 30.0% |
| ! | AAACTAACAAGAGCTTTAGT+GGG | + | chr2_4:10157086-10157105 | Msa0314400:intron | 30.0% |
| !! | AATTTCTAGAACACGTTTAC+TGG | - | chr2_4:10157136-10157155 | None:intergenic | 30.0% |
| !! | GTAAACGTGTTCTAGAAATT+AGG | + | chr2_4:10157136-10157155 | Msa0314400:intron | 30.0% |
| AAATCAGATATAGTTGCTCA+CGG | - | chr2_4:10157667-10157686 | None:intergenic | 30.0% | |
| TCAATGCCTATTAGAAAACA+GGG | - | chr2_4:10157799-10157818 | None:intergenic | 30.0% | |
| ATCAATGCCTATTAGAAAAC+AGG | - | chr2_4:10157800-10157819 | None:intergenic | 30.0% | |
| ! | ATGAATTTGAGTTCGATTCA+TGG | + | chr2_4:10157951-10157970 | Msa0314400:intron | 30.0% |
| ! | TGAATTTGAGTTCGATTCAT+GGG | + | chr2_4:10157952-10157971 | Msa0314400:intron | 30.0% |
| !!! | GTGTTAACCTTTGGTTTTTA+AGG | - | chr2_4:10158071-10158090 | None:intergenic | 30.0% |
| ! | TTTCGTTTTGTGTTAACCTT+TGG | - | chr2_4:10158080-10158099 | None:intergenic | 30.0% |
| ACGACAAATGAGCAAATTAA+GGG | - | chr2_4:10158184-10158203 | None:intergenic | 30.0% | |
| ATACTTGGTTACATAAAGGA+AGG | - | chr2_4:10158318-10158337 | None:intergenic | 30.0% | |
| TGGCATTCTTACAATATACT+TGG | - | chr2_4:10158333-10158352 | None:intergenic | 30.0% | |
| ! | GAAGAGAAAAGGGTAATTTT+TGG | - | chr2_4:10158353-10158372 | None:intergenic | 30.0% |
| TAGACACTAATACAAACGAT+AGG | - | chr2_4:10158471-10158490 | None:intergenic | 30.0% | |
| ! | CTTTTTCTGTTTACACTACA+AGG | + | chr2_4:10158491-10158510 | Msa0314400:CDS | 30.0% |
| CCTATTCCAATTACCAATAG+AGG | - | chr2_4:10151687-10151706 | None:intergenic | 35.0% | |
| ! | CCTCTATTGGTAATTGGAAT+AGG | + | chr2_4:10151684-10151703 | Msa0314400:intron | 35.0% |
| ! | GGTTTGAAATAGAAACCTTG+GGG | + | chr2_4:10151882-10151901 | Msa0314400:intron | 35.0% |
| ATCAAGAACATAAAACCCCA+AGG | - | chr2_4:10151900-10151919 | None:intergenic | 35.0% | |
| !! | CTTGATGTTGATTGCTTTTC+TGG | + | chr2_4:10151914-10151933 | Msa0314400:intron | 35.0% |
| !!! | GGTTTTGTTTGGTGATAGAT+TGG | + | chr2_4:10152239-10152258 | Msa0314400:intron | 35.0% |
| GAAGCAACACAAATTACAGT+TGG | + | chr2_4:10152277-10152296 | Msa0314400:intron | 35.0% | |
| GTTTGATGAATCTTATTGCC+AGG | + | chr2_4:10152304-10152323 | Msa0314400:intron | 35.0% | |
| ATTGCCAGGACTCAAATTAT+AGG | + | chr2_4:10152318-10152337 | Msa0314400:intron | 35.0% | |
| ! | CTGTTATTTGATGTAGCCAT+TGG | + | chr2_4:10152829-10152848 | Msa0314400:intron | 35.0% |
| ! | TTTTCCTTGGTTTCTGCATT+GGG | + | chr2_4:10152865-10152884 | Msa0314400:intron | 35.0% |
| !!! | TGTATCGGTCTTTTGATTTG+AGG | + | chr2_4:10153298-10153317 | Msa0314400:intron | 35.0% |
| CATTAATCCTAAGCTATGTG+AGG | + | chr2_4:10153424-10153443 | Msa0314400:intron | 35.0% | |
| TCTGCTGTGTTAAATGTAAC+TGG | + | chr2_4:10153536-10153555 | Msa0314400:intron | 35.0% | |
| TTCACATGTCTAAAAAGGAG+AGG | - | chr2_4:10153949-10153968 | None:intergenic | 35.0% | |
| CAGGTTTCACATGTCTAAAA+AGG | - | chr2_4:10153954-10153973 | None:intergenic | 35.0% | |
| ! | TACTGCAGAGTTTTTGAATG+TGG | + | chr2_4:10154348-10154367 | Msa0314400:intron | 35.0% |
| ! | GAGTTTTTGAATGTGGCATT+AGG | + | chr2_4:10154355-10154374 | Msa0314400:intron | 35.0% |
| ! | TGGCATTAGGCTTTATCAAT+TGG | + | chr2_4:10154368-10154387 | Msa0314400:intron | 35.0% |
| ! | GGCATTAGGCTTTATCAATT+GGG | + | chr2_4:10154369-10154388 | Msa0314400:intron | 35.0% |
| !! | CTTTATCAATTGGGTATCGA+TGG | + | chr2_4:10154378-10154397 | Msa0314400:intron | 35.0% |
| !!! | TAGCTCCTGCTCTTTATTTT+GGG | - | chr2_4:10154439-10154458 | None:intergenic | 35.0% |
| CTGACAATATCATGGTCAAT+TGG | - | chr2_4:10154462-10154481 | None:intergenic | 35.0% | |
| AACTACAGATGCAAATCTCA+GGG | - | chr2_4:10154535-10154554 | None:intergenic | 35.0% | |
| AAACTACAGATGCAAATCTC+AGG | - | chr2_4:10154536-10154555 | None:intergenic | 35.0% | |
| TTCCGATACATGGCAATAAA+AGG | - | chr2_4:10154605-10154624 | None:intergenic | 35.0% | |
| ! | TTTTATTGCCATGTATCGGA+AGG | + | chr2_4:10154604-10154623 | Msa0314400:intron | 35.0% |
| ! | CTTATCCCAATTTTCATCAC+CGG | - | chr2_4:10154672-10154691 | None:intergenic | 35.0% |
| AACAACAAGACACCTATTCT+AGG | + | chr2_4:10154692-10154711 | Msa0314400:intron | 35.0% | |
| ! | ACAAGACGCCTATTCTAAAA+TGG | + | chr2_4:10154724-10154743 | Msa0314400:intron | 35.0% |
| !! | GCCTATTCTAAAATGGCATA+AGG | + | chr2_4:10154731-10154750 | Msa0314400:intron | 35.0% |
| !!! | CTTTAGTTTGAACGCAGTTT+TGG | + | chr2_4:10154961-10154980 | Msa0314400:intron | 35.0% |
| TAAGATGTAGCCATTGAGTT+TGG | + | chr2_4:10155292-10155311 | Msa0314400:intron | 35.0% | |
| AAGATGTAGCCATTGAGTTT+GGG | + | chr2_4:10155293-10155312 | Msa0314400:intron | 35.0% | |
| GCATCGTTTCTATTAGTTGT+TGG | + | chr2_4:10155556-10155575 | Msa0314400:intron | 35.0% | |
| ! | TCACTTTCTAGCAGTTGTTT+AGG | + | chr2_4:10155615-10155634 | Msa0314400:intron | 35.0% |
| GAATCAAGGACAGTATTCAA+AGG | - | chr2_4:10155791-10155810 | None:intergenic | 35.0% | |
| !! | TTAAACTGATTTGGGCTGTT+TGG | + | chr2_4:10155822-10155841 | Msa0314400:intron | 35.0% |
| !! | TAAACTGATTTGGGCTGTTT+GGG | + | chr2_4:10155823-10155842 | Msa0314400:intron | 35.0% |
| CATGTTTCATGCAGGAAAAT+TGG | + | chr2_4:10155869-10155888 | Msa0314400:intron | 35.0% | |
| CAAATCTGCAGAATTGTAGA+TGG | + | chr2_4:10155894-10155913 | Msa0314400:intron | 35.0% | |
| ! | TAATTGACTCACAAACAGCA+AGG | - | chr2_4:10155920-10155939 | None:intergenic | 35.0% |
| ACCTGAACAACTCTAACATA+AGG | - | chr2_4:10156048-10156067 | None:intergenic | 35.0% | |
| TTAGAGTTGTTCAGGTGTTT+CGG | + | chr2_4:10156052-10156071 | Msa0314400:intron | 35.0% | |
| CTTAGACCAAACAAAACTTG+GGG | - | chr2_4:10156132-10156151 | None:intergenic | 35.0% | |
| CCTTAGACCAAACAAAACTT+GGG | - | chr2_4:10156133-10156152 | None:intergenic | 35.0% | |
| ACCTTAGACCAAACAAAACT+TGG | - | chr2_4:10156134-10156153 | None:intergenic | 35.0% | |
| !! | TTTTGTTTCCCGGCAATAAT+TGG | + | chr2_4:10156153-10156172 | Msa0314400:intron | 35.0% |
| !!! | AGCATGTGTTTTTTGTGGAT+GGG | + | chr2_4:10156208-10156227 | Msa0314400:intron | 35.0% |
| !!! | TGCATTGCTTTTTTTAGTGG+GGG | - | chr2_4:10156337-10156356 | None:intergenic | 35.0% |
| !!! | CTGCATTGCTTTTTTTAGTG+GGG | - | chr2_4:10156338-10156357 | None:intergenic | 35.0% |
| TTCTGGCATATGATAGTCAA+TGG | + | chr2_4:10156553-10156572 | Msa0314400:intron | 35.0% | |
| ! | GTTATTGTGTTTGCTTGCTA+TGG | + | chr2_4:10156594-10156613 | Msa0314400:intron | 35.0% |
| ATTCCACCTTCAAACTATAG+TGG | + | chr2_4:10156694-10156713 | Msa0314400:intron | 35.0% | |
| TTCTGATCAGCAACTATACA+CGG | - | chr2_4:10157032-10157051 | None:intergenic | 35.0% | |
| ! | AACTAACAAGAGCTTTAGTG+GGG | + | chr2_4:10157087-10157106 | Msa0314400:intron | 35.0% |
| ! | AACTAACAAGAGCTTTAGTG+GGG | + | chr2_4:10157087-10157106 | Msa0314400:intron | 35.0% |
| TTATGCAGCACCAGTAAAAA+AGG | + | chr2_4:10157695-10157714 | Msa0314400:intron | 35.0% | |
| GGTCTACTAAACCTTTCAAA+TGG | - | chr2_4:10157777-10157796 | None:intergenic | 35.0% | |
| CAATGCCTATTAGAAAACAG+GGG | - | chr2_4:10157798-10157817 | None:intergenic | 35.0% | |
| ATCGAACAATTAAACTCACG+TGG | + | chr2_4:10157895-10157914 | Msa0314400:intron | 35.0% | |
| ! | TAATTTGGAGTTCAATCGGA+AGG | - | chr2_4:10158034-10158053 | None:intergenic | 35.0% |
| ! | CGGATAATTTGGAGTTCAAT+CGG | - | chr2_4:10158038-10158057 | None:intergenic | 35.0% |
| CGATTGAACTCCAAATTATC+CGG | + | chr2_4:10158036-10158055 | Msa0314400:intron | 35.0% | |
| !!! | TTTGGTTTTTAAGGGAAAGG+AGG | - | chr2_4:10158062-10158081 | None:intergenic | 35.0% |
| TCCTTTCCCTTAAAAACCAA+AGG | + | chr2_4:10158061-10158080 | Msa0314400:intron | 35.0% | |
| !!! | ACCTTTGGTTTTTAAGGGAA+AGG | - | chr2_4:10158065-10158084 | None:intergenic | 35.0% |
| CACGACAAATGAGCAAATTA+AGG | - | chr2_4:10158185-10158204 | None:intergenic | 35.0% | |
| ! | GAATAAGAAACTCTTTTGGG+TGG | + | chr2_4:10158434-10158453 | Msa0314400:CDS | 35.0% |
| ! | GCATGTCCTCTATTGGTAAT+TGG | + | chr2_4:10151678-10151697 | Msa0314400:intron | 40.0% |
| ! | AATCTAAAGTGACCCTCTTC+AGG | + | chr2_4:10151723-10151742 | Msa0314400:intron | 40.0% |
| TTTGGTTGTGTTTGTGATGC+AGG | + | chr2_4:10151967-10151986 | Msa0314400:intron | 40.0% | |
| TTGGTTGTGTTTGTGATGCA+GGG | + | chr2_4:10151968-10151987 | Msa0314400:intron | 40.0% | |
| GCAACACAAATTACAGTTGG+AGG | + | chr2_4:10152280-10152299 | Msa0314400:intron | 40.0% | |
| ! | CTTTTCCTTGGTTTCTGCAT+TGG | + | chr2_4:10152864-10152883 | Msa0314400:intron | 40.0% |
| TCACAGCAAGTGATTCAATC+TGG | - | chr2_4:10152995-10153014 | None:intergenic | 40.0% | |
| ! | TTACCTTTTCTGATTGTGCG+AGG | + | chr2_4:10153023-10153042 | Msa0314400:intron | 40.0% |
| !! | CATGATTGATTTGTGGTGCT+TGG | + | chr2_4:10153056-10153075 | Msa0314400:intron | 40.0% |
| ! | TAGAAGGTGTGAGTTTCTGT+GGG | + | chr2_4:10153237-10153256 | Msa0314400:intron | 40.0% |
| ! | TATTGGTTAAAGCTCCCATG+AGG | + | chr2_4:10153274-10153293 | Msa0314400:intron | 40.0% |
| ATTGGTTAAAGCTCCCATGA+GGG | + | chr2_4:10153275-10153294 | Msa0314400:intron | 40.0% | |
| ! | TTAGGTTTTCACATGCTAGC+TGG | + | chr2_4:10153371-10153390 | Msa0314400:intron | 40.0% |
| ! | CAAAAGTGCATTAGTACTGC+AGG | - | chr2_4:10153471-10153490 | None:intergenic | 40.0% |
| GTATAAAACTGTCGAAAGGC+AGG | + | chr2_4:10153784-10153803 | Msa0314400:intron | 40.0% | |
| AACTTCGCTATGGTTGACAA+CGG | + | chr2_4:10154147-10154166 | Msa0314400:intron | 40.0% | |
| ! | TGGTTGACAACGGTATTTTG+AGG | + | chr2_4:10154157-10154176 | Msa0314400:intron | 40.0% |
| CGATTTCATGAATCCGAAGT+TGG | - | chr2_4:10154202-10154221 | None:intergenic | 40.0% | |
| AAAAACTCTGCAGTAGCTAC+AGG | - | chr2_4:10154343-10154362 | None:intergenic | 40.0% | |
| !! | GTAGCTCCTGCTCTTTATTT+TGG | - | chr2_4:10154440-10154459 | None:intergenic | 40.0% |
| TGAAGCCGGTGATGAAAATT+GGG | + | chr2_4:10154664-10154683 | Msa0314400:intron | 40.0% | |
| AGCTGTAGAGATATGAGTGA+AGG | + | chr2_4:10155144-10155163 | Msa0314400:intron | 40.0% | |
| AATCGCACAGCTATTGACAT+TGG | + | chr2_4:10155210-10155229 | Msa0314400:CDS | 40.0% | |
| !! | AAACTGATTTGGGCTGTTTG+GGG | + | chr2_4:10155824-10155843 | Msa0314400:intron | 40.0% |
| ! | TGTCAAAGGAGTACAAACTC+TGG | - | chr2_4:10155998-10156017 | None:intergenic | 40.0% |
| TGGCAACAGTTTCTTGTCAA+AGG | - | chr2_4:10156012-10156031 | None:intergenic | 40.0% | |
| CATAAGGCAACTACTCTGAA+TGG | - | chr2_4:10156032-10156051 | None:intergenic | 40.0% | |
| GCCTTATGTTAGAGTTGTTC+AGG | + | chr2_4:10156044-10156063 | Msa0314400:intron | 40.0% | |
| TAGAGTTGTTCAGGTGTTTC+GGG | + | chr2_4:10156053-10156072 | Msa0314400:intron | 40.0% | |
| !!! | CCCAAGTTTTGTTTGGTCTA+AGG | + | chr2_4:10156130-10156149 | Msa0314400:intron | 40.0% |
| !!! | TGGTCTAAGGTTTTGTTTCC+CGG | + | chr2_4:10156143-10156162 | Msa0314400:intron | 40.0% |
| TCGATAGCACCAATTATTGC+CGG | - | chr2_4:10156165-10156184 | None:intergenic | 40.0% | |
| !!! | GAGCATGTGTTTTTTGTGGA+TGG | + | chr2_4:10156207-10156226 | Msa0314400:intron | 40.0% |
| !!! | GCATGTGTTTTTTGTGGATG+GGG | + | chr2_4:10156209-10156228 | Msa0314400:intron | 40.0% |
| !!! | CATGTGTTTTTTGTGGATGG+GGG | + | chr2_4:10156210-10156229 | Msa0314400:intron | 40.0% |
| CAACCACTATAGTTTGAAGG+TGG | - | chr2_4:10156700-10156719 | None:intergenic | 40.0% | |
| AATTGTAGGTGAACGGTGAT+TGG | - | chr2_4:10156823-10156842 | None:intergenic | 40.0% | |
| ! | GTAGACCCCTGTTTTCTAAT+AGG | + | chr2_4:10157790-10157809 | Msa0314400:intron | 40.0% |
| AAACTCACGTGGTTAATGAG+TGG | + | chr2_4:10157906-10157925 | Msa0314400:intron | 40.0% | |
| TGTTTGTGATGCAGGGATTG+TGG | + | chr2_4:10151975-10151994 | Msa0314400:intron | 45.0% | |
| ACATCCCAATGCAGAAACCA+AGG | - | chr2_4:10152872-10152891 | None:intergenic | 45.0% | |
| CTACCTCGCACAATCAGAAA+AGG | - | chr2_4:10153029-10153048 | None:intergenic | 45.0% | |
| CACAGAAACTCACACCTTCT+AGG | - | chr2_4:10153238-10153257 | None:intergenic | 45.0% | |
| ! | CTAGAAGGTGTGAGTTTCTG+TGG | + | chr2_4:10153236-10153255 | Msa0314400:intron | 45.0% |
| AAAGACCGATACACCCTCAT+GGG | - | chr2_4:10153291-10153310 | None:intergenic | 45.0% | |
| AAAAGACCGATACACCCTCA+TGG | - | chr2_4:10153292-10153311 | None:intergenic | 45.0% | |
| CCATTCACCTCACATAGCTT+AGG | - | chr2_4:10153434-10153453 | None:intergenic | 45.0% | |
| CCTAAGCTATGTGAGGTGAA+TGG | + | chr2_4:10153431-10153450 | Msa0314400:intron | 45.0% | |
| AGCTATGTGAGGTGAATGGT+AGG | + | chr2_4:10153435-10153454 | Msa0314400:intron | 45.0% | |
| AAAACTGTCGAAAGGCAGGT+TGG | + | chr2_4:10153788-10153807 | Msa0314400:intron | 45.0% | |
| TCAACCATAGCGAAGTTGAG+CGG | - | chr2_4:10154144-10154163 | None:intergenic | 45.0% | |
| !!! | GACAACGGTATTTTGAGGTC+CGG | + | chr2_4:10154162-10154181 | Msa0314400:intron | 45.0% |
| TTTCCCGATTCTGCCAACTT+CGG | + | chr2_4:10154186-10154205 | Msa0314400:intron | 45.0% | |
| AATCCGAAGTTGGCAGAATC+GGG | - | chr2_4:10154192-10154211 | None:intergenic | 45.0% | |
| GAATCCGAAGTTGGCAGAAT+CGG | - | chr2_4:10154193-10154212 | None:intergenic | 45.0% | |
| TAGCTACAGGATAGGGTTCA+AGG | - | chr2_4:10154330-10154349 | None:intergenic | 45.0% | |
| TCTGCAGTAGCTACAGGATA+GGG | - | chr2_4:10154337-10154356 | None:intergenic | 45.0% | |
| TATTGCCATGTATCGGAAGG+AGG | + | chr2_4:10154607-10154626 | Msa0314400:intron | 45.0% | |
| CTGAAGCCGGTGATGAAAAT+TGG | + | chr2_4:10154663-10154682 | Msa0314400:intron | 45.0% | |
| AGTGGTTGCTTCTTCAGAAG+TGG | + | chr2_4:10154886-10154905 | Msa0314400:CDS | 45.0% | |
| ATGGTGATACTAAGTCTGCG+CGG | + | chr2_4:10155349-10155368 | Msa0314400:CDS | 45.0% | |
| CGATAGCACCAATTATTGCC+GGG | - | chr2_4:10156164-10156183 | None:intergenic | 45.0% | |
| CCTGTCAAATGCAAGCATAG+TGG | - | chr2_4:10156387-10156406 | None:intergenic | 45.0% | |
| CCACTATGCTTGCATTTGAC+AGG | + | chr2_4:10156384-10156403 | Msa0314400:intron | 45.0% | |
| ! | TTAGGCGATTAACTGACTCC+TGG | + | chr2_4:10157005-10157024 | Msa0314400:intron | 45.0% |
| ! | TAGGCGATTAACTGACTCCT+GGG | + | chr2_4:10157006-10157025 | Msa0314400:intron | 45.0% |
| ! | AAGAGCTTTAGTGGGGTTTC+AGG | + | chr2_4:10157094-10157113 | Msa0314400:intron | 45.0% |
| ! | AGAGCTTTAGTGGGGTTTCA+GGG | + | chr2_4:10157095-10157114 | Msa0314400:intron | 45.0% |
| GGTTTCAGGGGAAGTTCTTA+TGG | + | chr2_4:10157108-10157127 | Msa0314400:intron | 45.0% | |
| ! | AAGAGCTTTAGTGGGGTTTC+AGG | + | chr2_4:10157094-10157113 | Msa0314400:intron | 45.0% |
| ! | AGAGCTTTAGTGGGGTTTCA+GGG | + | chr2_4:10157095-10157114 | Msa0314400:intron | 45.0% |
| GGTTTCAGGGGAAGTTCTTA+TGG | + | chr2_4:10157108-10157127 | Msa0314400:intron | 45.0% | |
| !! | GTTTTTAAGGGAAAGGAGGC+CGG | - | chr2_4:10158058-10158077 | None:intergenic | 45.0% |
| TTACACTACAAGGGCAGACA+AGG | + | chr2_4:10158501-10158520 | Msa0314400:CDS | 45.0% | |
| !!! | TTTTTTAATGTTTAAATTTT+TGG | + | chr2_4:10152186-10152205 | Msa0314400:intron | 5.0% |
| !! | CAATAAATATAAATATTAAA+TGG | - | chr2_4:10158380-10158399 | None:intergenic | 5.0% |
| ! | AAGCTCCCATGAGGGTGTAT+CGG | + | chr2_4:10153283-10153302 | Msa0314400:intron | 50.0% |
| ! | GGTTTTCACATGCTAGCTGG+TGG | + | chr2_4:10153374-10153393 | Msa0314400:intron | 50.0% |
| ! | TTGAGCTTGCTCGACTCAAG+TGG | + | chr2_4:10154056-10154075 | Msa0314400:intron | 50.0% |
| GTTGGCAGAATCGGGAAAAC+CGG | - | chr2_4:10154184-10154203 | None:intergenic | 50.0% | |
| CTCTGCAGTAGCTACAGGAT+AGG | - | chr2_4:10154338-10154357 | None:intergenic | 50.0% | |
| !! | ATTGGGTATCGATGGCTGCA+AGG | + | chr2_4:10154386-10154405 | Msa0314400:intron | 50.0% |
| ! | GTATCGATGGCTGCAAGGTT+TGG | + | chr2_4:10154391-10154410 | Msa0314400:intron | 50.0% |
| ACACTCCTCCTTCCGATACA+TGG | - | chr2_4:10154615-10154634 | None:intergenic | 50.0% | |
| ACTTTGGGCTCCACATGACT+TGG | + | chr2_4:10154857-10154876 | Msa0314400:CDS | 50.0% | |
| CACTTCCTGTCCAAGTCATG+TGG | - | chr2_4:10154870-10154889 | None:intergenic | 50.0% | |
| ! | CACATGACTTGGACAGGAAG+TGG | + | chr2_4:10154868-10154887 | Msa0314400:CDS | 50.0% |
| TGGTGATACTAAGTCTGCGC+GGG | + | chr2_4:10155350-10155369 | Msa0314400:CDS | 50.0% | |
| ! | GGCTGTTTGGGGACTGTTTT+TGG | + | chr2_4:10155835-10155854 | Msa0314400:intron | 50.0% |
| !!! | GTGTTTTTTGTGGATGGGGG+TGG | + | chr2_4:10156213-10156232 | Msa0314400:intron | 50.0% |
| ! | GAGCTTTAGTGGGGTTTCAG+GGG | + | chr2_4:10157096-10157115 | Msa0314400:intron | 50.0% |
| ! | GAGCTTTAGTGGGGTTTCAG+GGG | + | chr2_4:10157096-10157115 | Msa0314400:intron | 50.0% |
| GGAAAGGAGGCCGGATAATT+TGG | - | chr2_4:10158049-10158068 | None:intergenic | 50.0% | |
| ACCATAGCGAAGTTGAGCGG+CGG | - | chr2_4:10154141-10154160 | None:intergenic | 55.0% | |
| ! | GACCTAGAGCGATCTGAAGC+CGG | + | chr2_4:10154650-10154669 | Msa0314400:intron | 55.0% |
| TCAGCAACTATACACGGCCC+AGG | - | chr2_4:10157026-10157045 | None:intergenic | 55.0% | |
| CGGCGGCACGAATGCTTCAT+CGG | - | chr2_4:10154124-10154143 | None:intergenic | 60.0% | |
| !! | CACCGGCTTCAGATCGCTCT+AGG | - | chr2_4:10154655-10154674 | None:intergenic | 60.0% |
| ! | GGGCTCCACATGACTTGGAC+AGG | + | chr2_4:10154862-10154881 | Msa0314400:CDS | 60.0% |
| ! | GCGGGCAGTCATGTTGGTTG+AGG | + | chr2_4:10155368-10155387 | Msa0314400:CDS | 60.0% |
| GCCGCCGCTCAACTTCGCTA+TGG | + | chr2_4:10154137-10154156 | Msa0314400:intron | 65.0% | |
| GTCTGCGCGGGCAGTCATGT+TGG | + | chr2_4:10155362-10155381 | Msa0314400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 10151676 | 10158545 | 10151676 | ID=Msa0314400;Name=Msa0314400 |
| chr2_4 | mRNA | 10151676 | 10158545 | 10151676 | ID=Msa0314400-mRNA-1;Parent=Msa0314400;Name=Msa0314400-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.22|0.5|0.55|9|0|157 |
| chr2_4 | exon | 10151676 | 10151681 | 10151676 | ID=Msa0314400-mRNA-1:exon:3891;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10152845 | 10152850 | 10152845 | ID=Msa0314400-mRNA-1:exon:3892;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10154855 | 10154965 | 10154855 | ID=Msa0314400-mRNA-1:exon:3893;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10155166 | 10155242 | 10155166 | ID=Msa0314400-mRNA-1:exon:3894;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10155326 | 10155460 | 10155326 | ID=Msa0314400-mRNA-1:exon:3895;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10156524 | 10156530 | 10156524 | ID=Msa0314400-mRNA-1:exon:3896;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10156677 | 10156682 | 10156677 | ID=Msa0314400-mRNA-1:exon:3897;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10156930 | 10156935 | 10156930 | ID=Msa0314400-mRNA-1:exon:3898;Parent=Msa0314400-mRNA-1 |
| chr2_4 | exon | 10158426 | 10158545 | 10158426 | ID=Msa0314400-mRNA-1:exon:3899;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10151676 | 10151681 | 10151676 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10152845 | 10152850 | 10152845 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10154855 | 10154965 | 10154855 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10155166 | 10155242 | 10155166 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10155326 | 10155460 | 10155326 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10156524 | 10156530 | 10156524 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10156677 | 10156682 | 10156677 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10156930 | 10156935 | 10156930 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| chr2_4 | CDS | 10158426 | 10158545 | 10158426 | ID=Msa0314400-mRNA-1:cds;Parent=Msa0314400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
