AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0679300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0679300 MtrunA17_Chr5g0440251 75.484 155 30 2 134 280 1049 1203 2.99e-63 216
Msa0679300 MtrunA17_Chr5g0440261 69.930 143 34 2 147 280 1060 1202 1.37e-54 192
Msa0679300 MtrunA17_Chr7g0228891 88.235 51 6 0 61 111 36 86 1.14e-24 100
Msa0679300 MtrunA17_Chr7g0271241 64.912 57 20 0 56 112 31 87 1.07e-17 82.8
Msa0679300 MtrunA17_Chr3g0131121 69.231 52 16 0 61 112 36 87 2.03e-17 81.3
Msa0679300 MtrunA17_Chr1g0211161 69.091 55 17 0 57 111 33 87 2.97e-17 79.3
Msa0679300 MtrunA17_Chr1g0193371 64.912 57 20 0 56 112 31 87 3.17e-17 81.6
Msa0679300 MtrunA17_Chr3g0117091 67.857 56 18 0 57 112 32 87 5.31e-17 80.5
Msa0679300 MtrunA17_Chr1g0187761 70.000 50 15 0 62 111 37 86 5.64e-17 79.3
Msa0679300 MtrunA17_Chr4g0044421 48.101 79 33 1 33 111 16 86 6.49e-17 77.8
Msa0679300 MtrunA17_Chr4g0037141 68.627 51 16 0 61 111 36 86 1.34e-16 78.6
Msa0679300 MtrunA17_Chr4g0057031 70.588 51 15 0 61 111 36 86 1.62e-16 78.2
Msa0679300 MtrunA17_Chr7g0274581 68.000 50 16 0 62 111 37 86 2.85e-16 76.3
Msa0679300 MtrunA17_Chr2g0311221 64.286 56 20 0 56 111 33 88 3.01e-16 78.2
Msa0679300 MtrunA17_Chr3g0110351 68.627 51 16 0 61 111 36 86 3.35e-16 77.8
Msa0679300 MtrunA17_Chr1g0193801 61.404 57 22 0 56 112 31 87 4.38e-16 78.2
Msa0679300 MtrunA17_Chr5g0434571 68.627 51 16 0 61 111 72 122 4.87e-16 77.8
Msa0679300 MtrunA17_Chr7g0261281 66.667 51 17 0 62 112 37 87 4.91e-16 77.0
Msa0679300 MtrunA17_Chr8g0349261 65.455 55 19 0 62 116 39 93 5.36e-16 77.0
Msa0679300 MtrunA17_Chr8g0385321 48.101 79 33 1 33 111 16 86 6.39e-16 77.0
Msa0679300 MtrunA17_Chr7g0270891 62.500 56 21 0 56 111 31 86 6.40e-16 77.8
Msa0679300 MtrunA17_Chr4g0058631 63.158 57 21 0 56 112 31 87 7.16e-16 77.4
Msa0679300 MtrunA17_Chr8g0342511 60.000 55 22 0 57 111 32 86 7.40e-16 72.0
Msa0679300 MtrunA17_Chr5g0435101 35.821 134 66 3 33 159 15 135 1.25e-15 74.7
Msa0679300 MtrunA17_Chr1g0167691 57.895 57 24 0 55 111 30 86 1.28e-15 75.5
Msa0679300 MtrunA17_Chr1g0203411 64.286 56 20 0 56 111 31 86 1.69e-15 75.9
Msa0679300 MtrunA17_Chr2g0323321 56.604 53 23 0 62 114 36 88 2.54e-15 71.2
Msa0679300 MtrunA17_Chr8g0342461 62.963 54 20 0 61 114 37 90 2.97e-15 71.6
Msa0679300 MtrunA17_Chr8g0342471 62.963 54 20 0 61 114 37 90 3.77e-15 71.6
Msa0679300 MtrunA17_Chr2g0323351 62.000 50 19 0 62 111 37 86 6.99e-15 73.2
Msa0679300 MtrunA17_Chr4g0039971 61.404 57 22 0 56 112 32 88 8.29e-15 74.3
Msa0679300 MtrunA17_Chr2g0330041 59.649 57 23 0 56 112 31 87 8.62e-15 74.7
Msa0679300 MtrunA17_Chr8g0342521 55.738 61 27 0 52 112 27 87 8.91e-15 74.3
Msa0679300 MtrunA17_Chr8g0342531 56.897 58 25 0 57 114 32 89 1.01e-14 70.9
Msa0679300 MtrunA17_Chr4g0042611 57.143 56 24 0 56 111 31 86 1.07e-14 68.6
Msa0679300 MtrunA17_Chr4g0022891 53.030 66 28 1 49 111 21 86 1.84e-14 72.0
Msa0679300 MtrunA17_Chr4g0022901 58.824 51 21 0 62 112 38 88 2.05e-14 72.4
Msa0679300 MtrunA17_Chr4g0032401 61.538 52 20 0 61 112 41 92 2.07e-14 72.8
Msa0679300 MtrunA17_Chr4g0022911 58.824 51 21 0 62 112 38 88 2.52e-14 72.4
Msa0679300 MtrunA17_Chr8g0342541 58.929 56 23 0 57 112 32 87 2.97e-14 72.8
Msa0679300 MtrunA17_Chr4g0022931 60.000 50 20 0 62 111 38 87 4.33e-14 71.2
Msa0679300 MtrunA17_Chr8g0342481 63.462 52 19 0 61 112 37 88 4.43e-14 72.4
Msa0679300 MtrunA17_Chr2g0294811 62.000 50 19 0 62 111 37 86 6.39e-14 67.4
Msa0679300 MtrunA17_Chr4g0048511 62.745 51 19 0 62 112 38 88 6.47e-14 71.6
Msa0679300 MtrunA17_Chr8g0346561 62.000 50 19 0 62 111 37 86 7.32e-14 70.9
Msa0679300 MtrunA17_Chr3g0115821 60.784 51 20 0 62 112 37 87 7.93e-14 71.2
Msa0679300 MtrunA17_Chr6g0470971 58.929 56 23 0 56 111 33 88 8.27e-14 70.5
Msa0679300 MtrunA17_Chr5g0395281 47.887 71 29 1 42 112 25 87 9.33e-14 70.9
Msa0679300 MtrunA17_Chr4g0042671 57.895 57 24 0 56 112 31 87 1.01e-13 71.2
Msa0679300 MtrunA17_Chr6g0453471 46.575 73 39 0 61 133 36 108 1.32e-13 70.9
Msa0679300 MtrunA17_Chr7g0275911 60.000 50 20 0 62 111 37 86 1.35e-13 69.7
Msa0679300 MtrunA17_Chr1g0203441 58.929 56 23 0 56 111 32 87 1.41e-13 69.7
Msa0679300 MtrunA17_Chr2g0281071 62.745 51 19 0 62 112 38 88 1.45e-13 70.5
Msa0679300 MtrunA17_Chr4g0070611 43.617 94 34 2 18 111 12 86 1.51e-13 70.1
Msa0679300 MtrunA17_Chr2g0323411 62.745 51 19 0 62 112 37 87 1.73e-13 70.1
Msa0679300 MtrunA17_Chr7g0217741 48.611 72 37 0 62 133 37 108 1.77e-13 70.1
Msa0679300 MtrunA17_Chr4g0070641 62.000 50 19 0 62 111 37 86 1.96e-13 67.4
Msa0679300 MtrunA17_Chr4g0022881 56.000 50 22 0 62 111 37 86 2.02e-13 68.6
Msa0679300 MtrunA17_Chr1g0167661 56.140 57 25 0 55 111 30 86 2.56e-13 68.9
Msa0679300 MtrunA17_Chr2g0309911 63.462 52 19 0 60 111 34 85 2.59e-13 69.7
Msa0679300 MtrunA17_Chr2g0328771 59.615 52 21 0 61 112 44 95 3.69e-13 69.3
Msa0679300 MtrunA17_Chr4g0068061 62.745 51 19 0 62 112 37 87 3.98e-13 69.3
Msa0679300 MtrunA17_Chr1g0194951 58.491 53 22 0 62 114 37 89 4.00e-13 69.3
Msa0679300 MtrunA17_Chr5g0397231 59.615 52 21 0 61 112 36 87 4.25e-13 68.9
Msa0679300 MtrunA17_Chr1g0186061 44.444 72 40 0 62 133 45 116 5.94e-13 67.8
Msa0679300 MtrunA17_Chr8g0387421 59.615 52 21 0 61 112 36 87 7.31e-13 68.2
Msa0679300 MtrunA17_Chr5g0395221 42.308 78 37 1 34 111 17 86 7.50e-13 63.5
Msa0679300 MtrunA17_Chr3g0103281 58.000 50 21 0 62 111 37 86 9.37e-13 68.2
Msa0679300 MtrunA17_Chr1g0168661 41.111 90 50 1 44 133 31 117 1.32e-12 66.6
Msa0679300 MtrunA17_Chr3g0088461 57.692 52 22 0 61 112 46 97 1.69e-12 67.4
Msa0679300 MtrunA17_Chr7g0247131 66.667 45 15 0 68 112 9 53 4.33e-12 65.5
Msa0679300 MtrunA17_Chr3g0121241 58.824 51 21 0 62 112 67 117 4.66e-12 65.9
Msa0679300 MtrunA17_Chr1g0151941 41.667 72 42 0 62 133 38 109 1.00e-11 64.3
Msa0679300 MtrunA17_Chr3g0092401 43.056 72 41 0 62 133 38 109 1.04e-11 64.7
Msa0679300 MtrunA17_Chr6g0452271 60.000 50 20 0 62 111 37 86 1.28e-11 64.7
Msa0679300 MtrunA17_Chr6g0453211 44.444 72 40 0 62 133 37 108 1.67e-11 64.3
Msa0679300 MtrunA17_Chr4g0060721 43.056 72 41 0 62 133 38 109 2.02e-11 63.9
Msa0679300 MtrunA17_Chr7g0254411 42.222 90 45 2 62 146 37 124 3.01e-11 63.5
Msa0679300 MtrunA17_Chr7g0217221 43.056 72 41 0 62 133 37 108 5.37e-11 62.4
Msa0679300 MtrunA17_Chr4g0055981 40.909 88 46 2 27 111 45 129 5.85e-11 61.6
Msa0679300 MtrunA17_Chr5g0410961 54.386 57 26 0 56 112 31 87 7.32e-11 62.4
Msa0679300 MtrunA17_Chr5g0417821 49.123 57 29 0 56 112 26 82 7.77e-11 62.0
Msa0679300 MtrunA17_Chr8g0354661 56.863 51 22 0 62 112 62 112 8.18e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0679300 AT2G27150.5 46.809 188 85 5 121 295 875 1060 2.20e-41 154
Msa0679300 AT2G27150.4 46.809 188 85 5 121 295 991 1176 2.34e-41 154
Msa0679300 AT2G27150.3 49.711 173 74 4 121 280 875 1047 1.30e-40 151
Msa0679300 AT2G27150.6 49.711 173 74 4 121 280 875 1047 1.30e-40 151
Msa0679300 AT2G27150.1 49.711 173 74 4 121 280 991 1163 1.62e-40 151
Msa0679300 AT2G27150.2 49.711 173 74 4 121 280 991 1163 1.62e-40 151
Msa0679300 AT3G43600.1 57.353 136 48 3 152 280 1016 1148 6.85e-40 149
Msa0679300 AT5G20960.1 54.483 145 54 5 147 280 1052 1195 2.05e-34 134
Msa0679300 AT5G20960.2 54.483 145 54 5 147 280 1052 1195 2.05e-34 134
Msa0679300 AT1G04580.1 50.000 130 58 1 158 280 1035 1164 1.72e-33 131
Msa0679300 AT5G14340.1 76.471 51 12 0 61 111 48 98 1.56e-20 90.1
Msa0679300 AT1G06180.1 70.588 51 15 0 62 112 37 87 5.47e-17 79.3
Msa0679300 AT1G56160.1 64.286 56 20 0 56 111 33 88 8.75e-17 79.7
Msa0679300 AT5G26660.1 69.231 52 16 0 61 112 36 87 1.95e-16 79.3
Msa0679300 AT4G38620.1 68.627 51 16 0 61 111 36 86 2.13e-16 78.6
Msa0679300 AT4G01680.3 64.286 56 20 0 56 111 31 86 2.27e-16 77.8
Msa0679300 AT4G01680.1 63.158 57 21 0 56 112 31 87 2.58e-16 79.0
Msa0679300 AT1G09540.1 67.308 52 17 0 61 112 36 87 3.12e-16 79.0
Msa0679300 AT5G16600.1 66.667 51 17 0 61 111 36 86 3.85e-16 78.2
Msa0679300 AT1G79180.1 62.500 56 21 0 56 111 33 88 5.10e-16 77.4
Msa0679300 AT1G57560.1 62.500 56 21 0 56 111 31 86 5.83e-16 77.8
Msa0679300 AT1G57560.2 62.500 56 21 0 56 111 31 86 5.86e-16 77.0
Msa0679300 AT4G09460.1 67.308 52 17 0 61 112 36 87 6.13e-16 76.3
Msa0679300 AT2G16720.1 66.667 51 17 0 61 111 36 86 9.44e-16 76.3
Msa0679300 AT3G23250.1 68.000 50 16 0 62 111 37 86 9.59e-16 76.6
Msa0679300 AT3G12820.1 59.091 66 24 1 49 111 23 88 1.04e-15 75.9
Msa0679300 AT2G31180.1 61.818 55 21 0 57 111 32 86 1.14e-15 75.9
Msa0679300 AT5G62320.1 53.425 73 34 0 61 133 44 116 1.49e-15 75.5
Msa0679300 AT3G61250.1 70.000 50 15 0 62 111 37 86 1.50e-15 76.3
Msa0679300 AT1G16490.1 60.714 56 22 0 56 111 33 88 2.39e-15 75.5
Msa0679300 AT1G22640.1 58.929 56 23 0 56 111 31 86 2.82e-15 74.7
Msa0679300 AT1G66230.1 64.706 51 18 0 61 111 36 86 5.08e-15 74.7
Msa0679300 AT5G16770.4 40.000 100 52 1 34 133 17 108 5.19e-15 75.1
Msa0679300 AT5G16770.3 40.000 100 52 1 34 133 17 108 5.19e-15 75.1
Msa0679300 AT4G34990.1 66.667 51 17 0 61 111 36 86 5.66e-15 74.3
Msa0679300 AT5G16770.1 40.000 100 52 1 34 133 17 108 6.23e-15 75.1
Msa0679300 AT5G16770.2 40.000 100 52 1 34 133 17 108 6.23e-15 75.1
Msa0679300 AT4G12350.1 63.462 52 19 0 61 112 36 87 2.12e-14 72.8
Msa0679300 AT4G22680.1 63.462 52 19 0 61 112 36 87 2.19e-14 72.4
Msa0679300 AT1G18710.1 45.833 72 39 0 62 133 37 108 2.30e-14 72.4
Msa0679300 AT1G35515.1 49.367 79 32 2 33 111 16 86 4.15e-14 70.9
Msa0679300 AT3G13890.2 56.897 58 25 0 55 112 30 87 4.27e-14 72.8
Msa0679300 AT3G02940.2 46.154 78 42 0 56 133 31 108 6.12e-14 71.6
Msa0679300 AT3G01140.2 48.611 72 37 0 62 133 37 108 6.87e-14 72.0
Msa0679300 AT3G02940.1 46.154 78 42 0 56 133 31 108 7.50e-14 71.6
Msa0679300 AT3G02940.3 46.154 78 42 0 56 133 31 108 7.50e-14 71.6
Msa0679300 AT3G01140.1 48.611 72 37 0 62 133 80 151 7.94e-14 72.0
Msa0679300 AT5G10280.1 43.590 78 44 0 56 133 31 108 8.56e-14 71.6
Msa0679300 AT5G12870.1 63.462 52 19 0 61 112 42 93 1.01e-13 70.9
Msa0679300 AT3G08500.1 61.538 52 20 0 61 112 54 105 1.10e-13 71.2
Msa0679300 AT4G17785.2 60.784 51 20 0 62 112 38 88 1.12e-13 71.2
Msa0679300 AT4G17785.1 60.784 51 20 0 62 112 38 88 1.16e-13 71.2
Msa0679300 AT5G15310.4 47.222 72 38 0 62 133 37 108 1.52e-13 69.7
Msa0679300 AT3G13540.1 64.000 50 18 0 62 111 48 97 1.72e-13 69.7
Msa0679300 AT5G65230.1 56.140 57 25 0 56 112 31 87 1.80e-13 70.5
Msa0679300 AT4G21440.1 62.745 51 19 0 62 112 37 87 1.86e-13 70.9
Msa0679300 AT5G54230.1 62.745 51 19 0 62 112 37 87 2.29e-13 70.1
Msa0679300 AT4G28110.1 60.784 51 20 0 62 112 37 87 2.33e-13 69.7
Msa0679300 AT5G60890.1 44.444 72 40 0 62 133 37 108 2.67e-13 69.7
Msa0679300 AT4G01680.2 50.685 73 24 1 52 112 27 99 2.93e-13 70.1
Msa0679300 AT5G15310.1 62.745 51 19 0 61 111 36 86 3.48e-13 69.7
Msa0679300 AT5G15310.2 47.222 72 38 0 62 133 37 108 3.53e-13 69.7
Msa0679300 AT3G48920.1 55.357 56 25 0 56 111 37 92 3.88e-13 68.9
Msa0679300 AT4G05100.1 60.784 51 20 0 62 112 38 88 4.21e-13 69.3
Msa0679300 AT3G12720.1 64.000 50 18 0 62 111 47 96 5.26e-13 68.9
Msa0679300 AT1G74080.1 62.000 50 19 0 62 111 37 86 5.60e-13 69.3
Msa0679300 AT5G49330.1 62.745 51 19 0 62 112 37 87 6.55e-13 68.9
Msa0679300 AT4G13480.1 45.833 72 39 0 62 133 31 102 9.54e-13 67.8
Msa0679300 AT3G62610.1 62.000 50 19 0 62 111 37 86 9.65e-13 68.6
Msa0679300 AT1G74430.1 44.444 72 40 0 62 133 37 108 1.06e-12 67.8
Msa0679300 AT1G34670.1 54.386 57 26 0 56 112 31 87 1.13e-12 68.6
Msa0679300 AT3G24310.1 44.444 72 40 0 62 133 43 114 1.69e-12 67.0
Msa0679300 AT1G18570.1 60.784 51 20 0 62 112 38 88 2.33e-12 67.4
Msa0679300 AT5G56110.1 41.026 78 46 0 56 133 31 108 2.45e-12 67.0
Msa0679300 AT1G63910.1 57.692 52 22 0 61 112 36 87 2.53e-12 67.4
Msa0679300 AT3G01530.1 58.000 50 21 0 62 111 50 99 2.86e-12 65.5
Msa0679300 AT3G28470.1 43.056 72 41 0 62 133 37 108 4.17e-12 66.2
Msa0679300 AT2G47460.1 56.604 53 23 0 62 114 37 89 4.22e-12 66.6
Msa0679300 AT5G52260.1 62.745 51 19 0 61 111 36 86 5.33e-12 65.5
Msa0679300 AT3G28910.1 41.379 87 47 1 62 148 37 119 5.37e-12 66.2
Msa0679300 AT1G08810.1 47.222 72 38 0 62 133 37 108 5.44e-12 65.9
Msa0679300 AT5G14750.1 34.862 109 52 1 3 111 1 90 5.48e-12 64.3
Msa0679300 AT1G74650.1 45.833 72 39 0 62 133 37 108 7.27e-12 65.9
Msa0679300 AT4G25560.1 52.727 55 26 0 57 111 30 84 1.21e-11 64.7
Msa0679300 AT3G13890.1 49.254 67 25 1 55 112 30 96 1.61e-11 65.1
Msa0679300 AT2G32460.1 54.386 57 26 0 56 112 37 93 1.85e-11 65.1
Msa0679300 AT2G32460.2 54.386 57 26 0 56 112 25 81 2.12e-11 65.1
Msa0679300 AT5G62470.2 43.056 72 41 0 62 133 37 108 2.12e-11 64.7
Msa0679300 AT5G07690.1 58.000 50 21 0 62 111 37 86 2.43e-11 64.3
Msa0679300 AT5G40330.1 34.286 105 50 1 7 111 1 86 2.53e-11 62.8
Msa0679300 AT2G26960.1 54.902 51 23 0 62 112 45 95 3.16e-11 64.3
Msa0679300 AT3G47600.1 43.056 72 41 0 62 133 37 108 3.25e-11 63.9
Msa0679300 AT5G07700.1 58.000 50 21 0 62 111 37 86 3.27e-11 63.9
Msa0679300 AT5G07700.2 58.000 50 21 0 62 111 37 86 3.27e-11 63.9
Msa0679300 AT1G79180.2 66.667 45 15 0 67 111 77 121 3.33e-11 63.9
Msa0679300 AT5G26660.2 67.442 43 14 0 70 112 14 56 3.80e-11 63.5
Msa0679300 AT5G61420.2 56.000 50 22 0 62 111 37 86 4.08e-11 63.9
Msa0679300 AT5G55020.1 58.824 51 21 0 62 112 51 101 8.86e-11 63.2

Find 120 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAAGTGGCTTTACTAAAA+TGG 0.180942 4_4:+36934873 Msa0679300:CDS
TTGGACAAAGTTTATCTTCT+TGG 0.189494 4_4:+36935721 Msa0679300:CDS
TTAGAGTTCAAAAGAGAAAT+AGG 0.207715 4_4:+36938230 Msa0679300:three_prime_UTR
GTATTTGAAAACGTGGTTAT+TGG 0.221994 4_4:+36933736 Msa0679300:five_prime_UTR
CAGATACATGCCTTGTTAAA+AGG 0.260634 4_4:-36938398 None:intergenic
TTGAAATTGGTCAGGGTCTC+TGG 0.269726 4_4:+36936190 Msa0679300:CDS
CCAGATCGACGCCGGAAAAT+TGG 0.279537 4_4:-36933319 None:intergenic
GTTGCTGCAACTCACCTTCT+TGG 0.313047 4_4:-36934298 None:intergenic
TGGCAAAATTGCACCGAGTT+GGG 0.320358 4_4:+36934206 Msa0679300:CDS
ATACATTTATGTAGGGTATT+GGG 0.323502 4_4:+36935657 Msa0679300:intron
TCGATGATGTGCTTTAATTA+TGG 0.325892 4_4:+36937009 Msa0679300:CDS
GATACATTTATGTAGGGTAT+TGG 0.326068 4_4:+36935656 Msa0679300:intron
AAATATTTACCTGCAAGTTT+AGG 0.328128 4_4:-36934696 None:intergenic
CACAATGTGATTTGAGTTAC+AGG 0.339705 4_4:+36938117 Msa0679300:three_prime_UTR
TAGTAAAGCCACTTCTCTTA+AGG 0.345265 4_4:-36934867 None:intergenic
GCTCAATCCAAGAGATTATC+AGG 0.347554 4_4:+36934267 Msa0679300:CDS
GTGGAAGACACTTATTCTTC+AGG 0.355056 4_4:+36936450 Msa0679300:CDS
GGAAAAGCTGCAGGAAGAAA+TGG 0.356051 4_4:+36936417 Msa0679300:CDS
GAAGTTGGTGGAATTGAAAT+TGG 0.358007 4_4:+36936177 Msa0679300:intron
TCTTTGCAATTGAAAACATA+TGG 0.364798 4_4:-36938327 None:intergenic
GATTCATCCAGATGCTGCTT+TGG 0.372772 4_4:+36935702 Msa0679300:CDS
AAGAGTGGAGAGTTAGAGAA+TGG 0.384541 4_4:+36934165 Msa0679300:CDS
GAATTTGCCTGATAATCTCT+TGG 0.390035 4_4:-36934274 None:intergenic
ATTTCATTCTTAGATACATA+TGG 0.391382 4_4:-36934122 None:intergenic
AAAGTCTCTTGGACAAAGTA+AGG 0.392185 4_4:+36936271 Msa0679300:CDS
TTATGAAGGTTGCCCATGTA+TGG 0.402133 4_4:+36933846 Msa0679300:intron
AGAATGGTTCCTAAACTTGC+AGG 0.410051 4_4:+36934687 Msa0679300:CDS
TAGGCTTAGCTGCAATATCT+TGG 0.415260 4_4:+36936372 Msa0679300:CDS
ATACAGAGAGAAGAGAGAAA+GGG 0.415601 4_4:-36937899 None:intergenic
AATACAGAGAGAAGAGAGAA+AGG 0.416025 4_4:-36937900 None:intergenic
TGGTGGAATTGAAATTGGTC+AGG 0.421825 4_4:+36936182 Msa0679300:CDS
GATACCACATGTATATGAAC+AGG 0.423288 4_4:-36933884 None:intergenic
TATAGTTCTTCTTCGACAAC+GGG 0.423814 4_4:+36937692 Msa0679300:three_prime_UTR
GAGAGGGTCGAGGGAGAGAA+AGG 0.428244 4_4:+36933222 Msa0679300:five_prime_UTR
GAGAGTTAGAGAATGGGATT+TGG 0.433207 4_4:+36934172 Msa0679300:CDS
TACCTTGAATGATGAAGAAA+AGG 0.437167 4_4:-36933406 None:intergenic
GAGTATTGCTCTGTCTTTGA+CGG 0.438637 4_4:+36937297 Msa0679300:CDS
CTTGGATGTGGTGTTCCAAC+CGG 0.441210 4_4:+36935739 Msa0679300:CDS
ACTTTGTCCAAAGCAGCATC+TGG 0.446107 4_4:-36935709 None:intergenic
CTGTCTTTGACGGCAAGATA+CGG 0.446305 4_4:+36937307 Msa0679300:CDS
TGAGATGGATTAATTATTTG+AGG 0.448610 4_4:+36934839 Msa0679300:CDS
AGAGTGGAGAGTTAGAGAAT+GGG 0.449418 4_4:+36934166 Msa0679300:CDS
TGAAATGCATTGATACGAAT+TGG 0.454730 4_4:-36937929 None:intergenic
GCACATCATCGAGTTATTGC+TGG 0.455826 4_4:-36936998 None:intergenic
TCTTCATGCCGAGACCTCTC+TGG 0.457267 4_4:+36937965 Msa0679300:three_prime_UTR
AAAGTTTATCTTCTTGGATG+TGG 0.458370 4_4:+36935727 Msa0679300:CDS
TACAGAGAGAAGAGAGAAAG+GGG 0.463697 4_4:-36937898 None:intergenic
AAGCTTCAATTCTCCATACA+TGG 0.464555 4_4:-36933859 None:intergenic
ATTTACGTGCAGTGTAGTAT+TGG 0.467345 4_4:+36937263 Msa0679300:CDS
CTCGGTACAATTCAGTGTAC+TGG 0.467871 4_4:+36936243 Msa0679300:CDS
CTGGCAAAATTGCACCGAGT+TGG 0.468340 4_4:+36934205 Msa0679300:CDS
GGAAAATTGGTGAACGGCGG+TGG 0.468517 4_4:-36933306 None:intergenic
CTGGACAAAGGTTAAACAAA+TGG 0.469843 4_4:+36936209 Msa0679300:CDS
ACATGCCTTGTTAAAAGGCT+CGG 0.473915 4_4:-36938393 None:intergenic
TGGGATTCAGTGTTGGAGAA+TGG 0.474448 4_4:+36934671 Msa0679300:intron
GAAGCTTTATAAACAAATTG+AGG 0.474564 4_4:+36937478 Msa0679300:three_prime_UTR
TACTGGAACTGAAAGTCTCT+TGG 0.475335 4_4:+36936260 Msa0679300:CDS
AAAACGATAAATGTTTGAAA+AGG 0.480413 4_4:-36937741 None:intergenic
GCCTCTCAAGGAAAAGCTGC+AGG 0.482128 4_4:+36936408 Msa0679300:CDS
CATGCCTTGTTAAAAGGCTC+GGG 0.486943 4_4:-36938392 None:intergenic
GAAAAGCTGCAGGAAGAAAT+GGG 0.492737 4_4:+36936418 Msa0679300:CDS
GCTGCAATATCTTGGTTGAA+AGG 0.499437 4_4:+36936380 Msa0679300:CDS
TTGAACATTCATCACTTCCC+AGG 0.499694 4_4:+36938072 Msa0679300:three_prime_UTR
GGCAAAATTGCACCGAGTTG+GGG 0.504725 4_4:+36934207 Msa0679300:CDS
ACAAGATATAGTGAAACATA+TGG 0.508450 4_4:+36938359 Msa0679300:three_prime_UTR
AAGAAATGGGCTCTATTAAG+TGG 0.511320 4_4:+36936431 Msa0679300:CDS
AAGCCACTTCTCTTAAGGTC+TGG 0.512429 4_4:-36934862 None:intergenic
ATATAGTTCTTCTTCGACAA+CGG 0.513832 4_4:+36937691 Msa0679300:three_prime_UTR
TCTTTCAGTCAAAGATCTGA+TGG 0.516727 4_4:+36938174 Msa0679300:three_prime_UTR
TGTCTTTGACGGCAAGATAC+GGG 0.517645 4_4:+36937308 Msa0679300:CDS
TGAGGCTCTTGAAGTACAAA+TGG 0.528759 4_4:+36937445 Msa0679300:exon
AATGATGAAGAAAAGGCAAT+CGG 0.534719 4_4:-36933399 None:intergenic
GAAAGTGTTCTAGATTGAGA+TGG 0.539059 4_4:+36934824 Msa0679300:CDS
CTTGCAATCGGTACTAATGA+AGG 0.539385 4_4:+36937649 Msa0679300:three_prime_UTR
CAGTTTAGAATTGAAGCTCA+AGG 0.543693 4_4:+36937620 Msa0679300:three_prime_UTR
CATGTGGTATCCCAAAACTA+AGG 0.546302 4_4:+36933896 Msa0679300:five_prime_UTR
ATACAACTACATGCCCGTCT+TGG 0.546437 4_4:+36934910 Msa0679300:CDS
TTGACAAGAAGTTTCAAGAG+TGG 0.546722 4_4:+36934150 Msa0679300:CDS
ATCAGGCAAATTCTCCAAGA+AGG 0.547419 4_4:+36934284 Msa0679300:CDS
AGGCCAGACCTTAAGAGAAG+TGG 0.549571 4_4:+36934859 Msa0679300:CDS
GAACGGCGGTGGTGAGTTGA+AGG 0.549605 4_4:-36933295 None:intergenic
TGGCTTTACTAAAATGGAAG+AGG 0.549867 4_4:+36934879 Msa0679300:CDS
TCAAGGAAAGTACTTGCAAT+CGG 0.550082 4_4:+36937637 Msa0679300:three_prime_UTR
AGGCAAGCTGCAAAGCAGTT+AGG 0.550981 4_4:+36936353 Msa0679300:CDS
ATTGTACCTGTTACCAAGAC+GGG 0.551252 4_4:-36934923 None:intergenic
ACGTATCAGAGAGGAAGATA+AGG 0.555110 4_4:+36938140 Msa0679300:three_prime_UTR
TGAACGAACGAGAGAGAGAG+AGG 0.565211 4_4:+36933205 None:intergenic
AGGGGAGAAACGCGTTCAGT+GGG 0.568312 4_4:-36933268 None:intergenic
AGAGGGTCGAGGGAGAGAAA+GGG 0.568946 4_4:+36933223 Msa0679300:five_prime_UTR
CAAATGGCTGCATTCGCCCT+CGG 0.569968 4_4:+36936225 Msa0679300:CDS
CACATCATCGAGTTATTGCT+GGG 0.572792 4_4:-36936997 None:intergenic
GTGGAAATAGATCTTCTGAC+TGG 0.574394 4_4:+36937214 Msa0679300:CDS
GTGGTGAGTTGAAGGACGAA+GGG 0.578569 4_4:-36933287 None:intergenic
GGTGGTGAGTTGAAGGACGA+AGG 0.580929 4_4:-36933288 None:intergenic
TGAAAGGTTGAAGCCTCTCA+AGG 0.581975 4_4:+36936396 Msa0679300:CDS
TTGAAAACGTGGTTATTGGA+TGG 0.583026 4_4:+36933740 Msa0679300:five_prime_UTR
TTTCAATTGCAAAGACATTG+TGG 0.583903 4_4:+36938335 Msa0679300:three_prime_UTR
AACGGCGACCAGATCGACGC+CGG 0.584504 4_4:-36933327 None:intergenic
AAGGGGAGAAACGCGTTCAG+TGG 0.588018 4_4:-36933269 None:intergenic
AAATGCAGTTTGCCCCAACT+CGG 0.591656 4_4:-36934219 None:intergenic
AAGTCTCTTGGACAAAGTAA+GGG 0.595850 4_4:+36936272 Msa0679300:CDS
TGTTGAGCATAACTTTAGCA+TGG 0.597925 4_4:+36937866 Msa0679300:three_prime_UTR
AGCTTCAATTCTCCATACAT+GGG 0.610707 4_4:-36933858 None:intergenic
GGTGGAATTGAAATTGGTCA+GGG 0.615633 4_4:+36936183 Msa0679300:CDS
GTTGATTTATGCAACAGTGA+TGG 0.629410 4_4:+36935510 Msa0679300:CDS
TTCTGGGAGTACTACATCAG+AGG 0.635558 4_4:+36936333 Msa0679300:CDS
TATTGTACCTGTTACCAAGA+CGG 0.637205 4_4:-36934924 None:intergenic
TGGTCAGGGTCTCTGGACAA+AGG 0.642121 4_4:+36936197 Msa0679300:CDS
TAGAAGCTTGAAGATTGCTG+AGG 0.644476 4_4:+36937427 Msa0679300:intron
TTTCACAGTATTTGAAAACG+TGG 0.647148 4_4:+36933729 Msa0679300:five_prime_UTR
GACGCCGGAAAATTGGTGAA+CGG 0.648610 4_4:-36933312 None:intergenic
AGTACACTGAATTGTACCGA+GGG 0.662453 4_4:-36936241 None:intergenic
TTGCCCTGTTCATATACATG+TGG 0.670217 4_4:+36933880 Msa0679300:five_prime_UTR
TGGTGAGTTGAAGGACGAAG+GGG 0.681565 4_4:-36933286 None:intergenic
GCCGGAAAATTGGTGAACGG+CGG 0.696737 4_4:-36933309 None:intergenic
CAGTACACTGAATTGTACCG+AGG 0.703367 4_4:-36936242 None:intergenic
AGTGGGAGAGAATAACGCGA+CGG 0.715054 4_4:-36933251 None:intergenic
TTATGCAACAGTGATGGTGA+AGG 0.721198 4_4:+36935516 Msa0679300:CDS
ATACCACATGTATATGAACA+GGG 0.722802 4_4:-36933883 None:intergenic
AGTTACAGGACGTATCAGAG+AGG 0.727094 4_4:+36938131 Msa0679300:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTCATAATTTGATATT+GGG + chr4_4:36937343-36937362 Msa0679300:intron 10.0%
!! TTGTACAAAAAAATTAATGT+TGG + chr4_4:36933819-36933838 Msa0679300:intron 15.0%
!!! TGATATCTTGATAATTTTAA+AGG + chr4_4:36934527-36934546 Msa0679300:intron 15.0%
!!! AGATTTTTAAGTATTTAAGA+TGG + chr4_4:36935387-36935406 Msa0679300:intron 15.0%
!! AGAAATATATAATCATTTGA+AGG + chr4_4:36935966-36935985 Msa0679300:intron 15.0%
!! CTAATCTGTTTATTATTTAT+GGG + chr4_4:36936063-36936082 Msa0679300:intron 15.0%
!!! ACATAAATAGTTTTTTCATA+TGG - chr4_4:36936614-36936633 None:intergenic 15.0%
!! CTTATTTCATAATTTGATAT+TGG + chr4_4:36937342-36937361 Msa0679300:intron 15.0%
!! GTAATAAAAAGAACATTATT+CGG + chr4_4:36938463-36938482 Msa0679300:three_prime_UTR 15.0%
!!! GATTATTAGATTGTGAATTT+TGG + chr4_4:36933555-36933574 Msa0679300:intron 20.0%
!!! GTTAGGATTTTTATTGATTT+AGG + chr4_4:36933604-36933623 Msa0679300:intron 20.0%
!!! AATTTCTTTTTCATTTACCA+AGG + chr4_4:36934007-36934026 Msa0679300:intron 20.0%
!! ATTTCATTCTTAGATACATA+TGG - chr4_4:36934125-36934144 None:intergenic 20.0%
!! AAAAATATATGCAAAGTTAG+AGG - chr4_4:36934465-36934484 None:intergenic 20.0%
!!! TTAAGAGGTATTAAGAAAAT+GGG + chr4_4:36934557-36934576 Msa0679300:intron 20.0%
!! TGAACTTTATCCTTAATAAT+TGG + chr4_4:36934651-36934670 Msa0679300:intron 20.0%
!! GAACTTTATCCTTAATAATT+GGG + chr4_4:36934652-36934671 Msa0679300:intron 20.0%
!! ATAGATAAGTTTCATTGAAA+AGG + chr4_4:36934757-36934776 Msa0679300:intron 20.0%
!!! ATGCTTTCTAAAATTTCATT+AGG + chr4_4:36934946-36934965 Msa0679300:intron 20.0%
!!! ATCGTTTTAAATTACAATTG+CGG + chr4_4:36935080-36935099 Msa0679300:intron 20.0%
!!! CAAAAACAATTTTTGAATTG+TGG - chr4_4:36935207-36935226 None:intergenic 20.0%
!!! CACAATTCAAAAATTGTTTT+TGG + chr4_4:36935205-36935224 Msa0679300:intron 20.0%
!!! TTATTAGTGTGTATCATTTT+TGG + chr4_4:36935228-36935247 Msa0679300:intron 20.0%
!! GAGAAACTTTAAATAGAAAT+TGG + chr4_4:36935553-36935572 Msa0679300:intron 20.0%
!! TATGTTTGATACATTTATGT+AGG + chr4_4:36935649-36935668 Msa0679300:intron 20.0%
!! ATGTTTGATACATTTATGTA+GGG + chr4_4:36935650-36935669 Msa0679300:intron 20.0%
!! CCATAAATAATAAACAGATT+AGG - chr4_4:36936065-36936084 None:intergenic 20.0%
!! CCTAATCTGTTTATTATTTA+TGG + chr4_4:36936062-36936081 Msa0679300:intron 20.0%
!! CTACATTATTGTTATGTTAA+CGG + chr4_4:36936476-36936495 Msa0679300:intron 20.0%
!! TACATTATTGTTATGTTAAC+GGG + chr4_4:36936477-36936496 Msa0679300:intron 20.0%
!!! ATTTCCATTATTTAGAATGA+TGG - chr4_4:36937184-36937203 None:intergenic 20.0%
!!! AATAATGGAAATTATTTCTC+AGG + chr4_4:36937192-36937211 Msa0679300:intron 20.0%
!! AAAACGATAAATGTTTGAAA+AGG - chr4_4:36937744-36937763 None:intergenic 20.0%
!!! GAAAATTTCACTCATTTTTT+GGG + chr4_4:36938094-36938113 Msa0679300:three_prime_UTR 20.0%
!!! TGTTCTTTTTATTACAGTTT+TGG - chr4_4:36938458-36938477 None:intergenic 20.0%
!!! TTGTTGTTCTATCATTTTTG+TGG - chr4_4:36933379-36933398 None:intergenic 25.0%
! ATCAAGATGAAATGCAAATT+GGG - chr4_4:36933538-36933557 None:intergenic 25.0%
! AATCAAGATGAAATGCAAAT+TGG - chr4_4:36933539-36933558 None:intergenic 25.0%
!!! ATTAGATTGTGAATTTTGGT+TGG + chr4_4:36933559-36933578 Msa0679300:intron 25.0%
!!! TTAGATTGTGAATTTTGGTT+GGG + chr4_4:36933560-36933579 Msa0679300:intron 25.0%
! TTAATGTTGGAACTTTATGA+AGG + chr4_4:36933832-36933851 Msa0679300:intron 25.0%
!!! GTTTTTCTTACCTTAGTTTT+GGG - chr4_4:36933909-36933928 None:intergenic 25.0%
!! TGTTTTTCTTACCTTAGTTT+TGG - chr4_4:36933910-36933929 None:intergenic 25.0%
!!! TTTTCAAGTTATTGATCACT+TGG + chr4_4:36934242-36934261 Msa0679300:CDS 25.0%
! TCAATTTAGAAAAGGTTTAG+AGG - chr4_4:36934323-36934342 None:intergenic 25.0%
! GTCATTAGTCAATTTAGAAA+AGG - chr4_4:36934331-36934350 None:intergenic 25.0%
! ATGCTAACAAATATATGTGT+TGG - chr4_4:36934431-36934450 None:intergenic 25.0%
! TTTAAAGGTAAAGACTTAAG+AGG + chr4_4:36934542-36934561 Msa0679300:intron 25.0%
!!! CTTAAGAGGTATTAAGAAAA+TGG + chr4_4:36934556-36934575 Msa0679300:intron 25.0%
! AAATATTTACCTGCAAGTTT+AGG - chr4_4:36934699-36934718 None:intergenic 25.0%
!!! AACATGGTGCATATTTTTTA+AGG + chr4_4:36934787-36934806 Msa0679300:intron 25.0%
!!! TTTTAAGGTCTTCTAAGATA+TGG + chr4_4:36934802-36934821 Msa0679300:intron 25.0%
!!! TGAGATGGATTAATTATTTG+AGG + chr4_4:36934839-36934858 Msa0679300:CDS 25.0%
! AGACTATTGTGAATTACTTA+GGG - chr4_4:36935010-36935029 None:intergenic 25.0%
! GAAAACACAGAAATTTGATA+GGG - chr4_4:36935322-36935341 None:intergenic 25.0%
! AGAAAACACAGAAATTTGAT+AGG - chr4_4:36935323-36935342 None:intergenic 25.0%
!!! GTATTTAAGATGGAACATTT+TGG + chr4_4:36935397-36935416 Msa0679300:intron 25.0%
!! ATACATTTATGTAGGGTATT+GGG + chr4_4:36935657-36935676 Msa0679300:intron 25.0%
! ACAAAAACTAACAATTCAAG+CGG - chr4_4:36935783-36935802 None:intergenic 25.0%
! TCTTCATCCCATATATATAA+GGG - chr4_4:36936089-36936108 None:intergenic 25.0%
! ACATTATTGTTATGTTAACG+GGG + chr4_4:36936478-36936497 Msa0679300:intron 25.0%
! GGGTTATATTCAAATATTGA+TGG + chr4_4:36936498-36936517 Msa0679300:intron 25.0%
! TTAGCATGTTCACAATTTAT+GGG + chr4_4:36936819-36936838 Msa0679300:intron 25.0%
!!! CAGTATTTTCCACTTTAAAA+CGG - chr4_4:36936857-36936876 None:intergenic 25.0%
!!! TTTTAAAGTGGAAAATACTG+AGG + chr4_4:36936857-36936876 Msa0679300:intron 25.0%
!! TTTAAAGTGGAAAATACTGA+GGG + chr4_4:36936858-36936877 Msa0679300:intron 25.0%
! TGAATGAACTTATACCATTA+AGG - chr4_4:36937080-36937099 None:intergenic 25.0%
! TATGCCATCATTCTAAATAA+TGG + chr4_4:36937177-36937196 Msa0679300:intron 25.0%
!! GAAGCTTTATAAACAAATTG+AGG + chr4_4:36937478-36937497 Msa0679300:three_prime_UTR 25.0%
! AGAACACATGTTAATCAATT+TGG + chr4_4:36937566-36937585 Msa0679300:intron 25.0%
!!! TCGTTTTTTTCAAGTACTAT+TGG + chr4_4:36937757-36937776 Msa0679300:three_prime_UTR 25.0%
!!! TTTTTTCAAGTACTATTGGT+AGG + chr4_4:36937761-36937780 Msa0679300:three_prime_UTR 25.0%
!! TCATGTGATACTAAAGTTTT+AGG + chr4_4:36937792-36937811 Msa0679300:three_prime_UTR 25.0%
!! TGTTATATTCATTTTGAGCA+CGG + chr4_4:36938039-36938058 Msa0679300:three_prime_UTR 25.0%
!! AAAATGAGTGAAATTTTCCT+GGG - chr4_4:36938092-36938111 None:intergenic 25.0%
!! AAAAATGAGTGAAATTTTCC+TGG - chr4_4:36938093-36938112 None:intergenic 25.0%
!!! GGAAAATTTCACTCATTTTT+TGG + chr4_4:36938093-36938112 Msa0679300:three_prime_UTR 25.0%
! TTAAGATTCTGTGACAAAAA+TGG + chr4_4:36938204-36938223 Msa0679300:three_prime_UTR 25.0%
! TTAGAGTTCAAAAGAGAAAT+AGG + chr4_4:36938230-36938249 Msa0679300:three_prime_UTR 25.0%
! TCTTTGCAATTGAAAACATA+TGG - chr4_4:36938330-36938349 None:intergenic 25.0%
! ACAAGATATAGTGAAACATA+TGG + chr4_4:36938359-36938378 Msa0679300:three_prime_UTR 25.0%
AATGATGAAGAAAAGGCAAT+CGG - chr4_4:36933402-36933421 None:intergenic 30.0%
TACCTTGAATGATGAAGAAA+AGG - chr4_4:36933409-36933428 None:intergenic 30.0%
ATCTGATATCATGCATGTTT+AGG + chr4_4:36933449-36933468 Msa0679300:intron 30.0%
! TCTTTTCATCAATCTTCATG+AGG + chr4_4:36933479-36933498 Msa0679300:intron 30.0%
TCAAGATGAAATGCAAATTG+GGG - chr4_4:36933537-36933556 None:intergenic 30.0%
!! TTTGTTCATCCTTAATTTGC+AGG + chr4_4:36933692-36933711 Msa0679300:intron 30.0%
TACAATGATCCTGCAAATTA+AGG - chr4_4:36933704-36933723 None:intergenic 30.0%
TTTCACAGTATTTGAAAACG+TGG + chr4_4:36933729-36933748 Msa0679300:five_prime_UTR 30.0%
GTATTTGAAAACGTGGTTAT+TGG + chr4_4:36933736-36933755 Msa0679300:five_prime_UTR 30.0%
ATACCACATGTATATGAACA+GGG - chr4_4:36933886-36933905 None:intergenic 30.0%
TGTTTGAGAGAATGTCTATT+TGG + chr4_4:36933935-36933954 Msa0679300:intron 30.0%
CTAAATTGACTAATGACTCA+AGG + chr4_4:36934334-36934353 Msa0679300:intron 30.0%
! ACAAATATATGTGTTGGTGT+CGG - chr4_4:36934425-36934444 None:intergenic 30.0%
ATAACAACCATGTTGTGATA+AGG + chr4_4:36934580-36934599 Msa0679300:intron 30.0%
ACACTGAATCCCAATTATTA+AGG - chr4_4:36934664-36934683 None:intergenic 30.0%
TAATAATTGGGATTCAGTGT+TGG + chr4_4:36934664-36934683 Msa0679300:intron 30.0%
!! TTGAAAAGGTGTTTCTAACA+TGG + chr4_4:36934771-36934790 Msa0679300:intron 30.0%
ACATAAGGTTTGCATATATG+AGG + chr4_4:36934983-36935002 Msa0679300:intron 30.0%
GACTATTGTGAATTACTTAG+GGG - chr4_4:36935009-36935028 None:intergenic 30.0%
GAGACTATTGTGAATTACTT+AGG - chr4_4:36935011-36935030 None:intergenic 30.0%
! TTTTATACCTCAACTCATCT+TGG + chr4_4:36935037-36935056 Msa0679300:intron 30.0%
TTTATACCTCAACTCATCTT+GGG + chr4_4:36935038-36935057 Msa0679300:intron 30.0%
! CTTGCTATGATACATTAGAT+AGG - chr4_4:36935357-36935376 None:intergenic 30.0%
GGAAAACGATGAATGATATA+CGG - chr4_4:36935443-36935462 None:intergenic 30.0%
AAAACAACTTTCCTGAAACA+TGG - chr4_4:36935470-36935489 None:intergenic 30.0%
! ATCAACTTCAGTATTTTCAG+AGG - chr4_4:36935496-36935515 None:intergenic 30.0%
GATACATTTATGTAGGGTAT+TGG + chr4_4:36935656-36935675 Msa0679300:intron 30.0%
TTGGACAAAGTTTATCTTCT+TGG + chr4_4:36935721-36935740 Msa0679300:CDS 30.0%
AAAGTTTATCTTCTTGGATG+TGG + chr4_4:36935727-36935746 Msa0679300:CDS 30.0%
GATAAAGTTCAAGAGTTTAC+CGG - chr4_4:36935761-36935780 None:intergenic 30.0%
! AAGCACATTTGAAATGTTTG+CGG + chr4_4:36935866-36935885 Msa0679300:intron 30.0%
!!! GAAAGAAAAGTTTTTTACCC+TGG - chr4_4:36935900-36935919 None:intergenic 30.0%
! TTGAAGGTAAAATGCCTTTT+TGG + chr4_4:36935982-36936001 Msa0679300:intron 30.0%
TCAAAAGTTTGCAACCAAAA+AGG - chr4_4:36935999-36936018 None:intergenic 30.0%
TTTATGGGCCCTTATATATA+TGG + chr4_4:36936078-36936097 Msa0679300:intron 30.0%
TTATGGGCCCTTATATATAT+GGG + chr4_4:36936079-36936098 Msa0679300:intron 30.0%
GTCTTCATCCCATATATATA+AGG - chr4_4:36936090-36936109 None:intergenic 30.0%
TTCATGTTACACTCATGATT+AGG - chr4_4:36936555-36936574 None:intergenic 30.0%
TAATCATGAGTGTAACATGA+AGG + chr4_4:36936554-36936573 Msa0679300:intron 30.0%
TCATATTGATGCATCTATCA+TGG + chr4_4:36936685-36936704 Msa0679300:intron 30.0%
ATTAGACCTTTAACAGGTAA+AGG - chr4_4:36936776-36936795 None:intergenic 30.0%
TTTACCTGTTAAAGGTCTAA+TGG + chr4_4:36936775-36936794 Msa0679300:intron 30.0%
CTTAGCATGTTCACAATTTA+TGG + chr4_4:36936818-36936837 Msa0679300:intron 30.0%
!!! ATAATCCAACCGTTTTAAAG+TGG + chr4_4:36936845-36936864 Msa0679300:intron 30.0%
!!! ATTTTCCACTTTAAAACGGT+TGG - chr4_4:36936853-36936872 None:intergenic 30.0%
TCGATGATGTGCTTTAATTA+TGG + chr4_4:36937009-36937028 Msa0679300:CDS 30.0%
! AATGGAAATTATTTCTCAGG+TGG + chr4_4:36937195-36937214 Msa0679300:intron 30.0%
! ATTTGGAACTTGATTTCATC+AGG + chr4_4:36937583-36937602 Msa0679300:intron 30.0%
ATATAGTTCTTCTTCGACAA+CGG + chr4_4:36937691-36937710 Msa0679300:three_prime_UTR 30.0%
!!! GATTTTTTTAGCTTCTGTGA+TGG + chr4_4:36937843-36937862 Msa0679300:three_prime_UTR 30.0%
! TGAAATGCATTGATACGAAT+TGG - chr4_4:36937932-36937951 None:intergenic 30.0%
! CTATTTTCTACAAACTTGCA+TGG + chr4_4:36938291-36938310 Msa0679300:three_prime_UTR 30.0%
TTTCAATTGCAAAGACATTG+TGG + chr4_4:36938335-36938354 Msa0679300:three_prime_UTR 30.0%
! TTTTACACTTTCTCTGTTTC+AGG + chr4_4:36938421-36938440 Msa0679300:three_prime_UTR 30.0%
!! TTTTGCTAGTTTAGCGAGAA+CGG - chr4_4:36933348-36933367 None:intergenic 35.0%
! TGCCTTTTCTTCATCATTCA+AGG + chr4_4:36933404-36933423 Msa0679300:five_prime_UTR 35.0%
CAAGATGAAATGCAAATTGG+GGG - chr4_4:36933536-36933555 None:intergenic 35.0%
!! GTGGATTTTGGAAGAAAGTT+AGG + chr4_4:36933587-36933606 Msa0679300:intron 35.0%
GATTTAGGTGAAAGAATCTG+TGG + chr4_4:36933619-36933638 Msa0679300:intron 35.0%
CTGTGGAGAATCAATCAATT+TGG + chr4_4:36933636-36933655 Msa0679300:intron 35.0%
ATAAATGACCAAACAGAGGA+AGG - chr4_4:36933669-36933688 None:intergenic 35.0%
ACACATAAATGACCAAACAG+AGG - chr4_4:36933673-36933692 None:intergenic 35.0%
TTGAAAACGTGGTTATTGGA+TGG + chr4_4:36933740-36933759 Msa0679300:five_prime_UTR 35.0%
AGCTTCAATTCTCCATACAT+GGG - chr4_4:36933861-36933880 None:intergenic 35.0%
AAGCTTCAATTCTCCATACA+TGG - chr4_4:36933862-36933881 None:intergenic 35.0%
GATACCACATGTATATGAAC+AGG - chr4_4:36933887-36933906 None:intergenic 35.0%
AACACAACTTTCACTTTCCT+TGG - chr4_4:36934027-36934046 None:intergenic 35.0%
! AGATAAATGTTGCTTGATGC+AGG + chr4_4:36934067-36934086 Msa0679300:intron 35.0%
! GATAAATGTTGCTTGATGCA+GGG + chr4_4:36934068-36934087 Msa0679300:intron 35.0%
! ATAAATGTTGCTTGATGCAG+GGG + chr4_4:36934069-36934088 Msa0679300:intron 35.0%
TTGACAAGAAGTTTCAAGAG+TGG + chr4_4:36934150-36934169 Msa0679300:CDS 35.0%
GAATTTGCCTGATAATCTCT+TGG - chr4_4:36934277-36934296 None:intergenic 35.0%
AAACCAACCTTATCACAACA+TGG - chr4_4:36934590-36934609 None:intergenic 35.0%
!! GAAAGTGTTCTAGATTGAGA+TGG + chr4_4:36934824-36934843 Msa0679300:CDS 35.0%
TAGTAAAGCCACTTCTCTTA+AGG - chr4_4:36934870-36934889 None:intergenic 35.0%
! GAGAAGTGGCTTTACTAAAA+TGG + chr4_4:36934873-36934892 Msa0679300:CDS 35.0%
! TGGCTTTACTAAAATGGAAG+AGG + chr4_4:36934879-36934898 Msa0679300:CDS 35.0%
TATTGTACCTGTTACCAAGA+CGG - chr4_4:36934927-36934946 None:intergenic 35.0%
GCAAACCTTATGTTATGCTT+AGG - chr4_4:36934976-36934995 None:intergenic 35.0%
GCTATGATACATTAGATAGG+CGG - chr4_4:36935354-36935373 None:intergenic 35.0%
! GTTTTCCTTAACCATGTTTC+AGG + chr4_4:36935456-36935475 Msa0679300:intron 35.0%
ACTTTCCTGAAACATGGTTA+AGG - chr4_4:36935464-36935483 None:intergenic 35.0%
! GTTGATTTATGCAACAGTGA+TGG + chr4_4:36935510-36935529 Msa0679300:CDS 35.0%
AACAACAATGAATGCAGCAA+AGG + chr4_4:36936116-36936135 Msa0679300:intron 35.0%
TGAAACAGTGACCATAATGT+TGG + chr4_4:36936153-36936172 Msa0679300:intron 35.0%
!! GAAGTTGGTGGAATTGAAAT+TGG + chr4_4:36936177-36936196 Msa0679300:intron 35.0%
CTGGACAAAGGTTAAACAAA+TGG + chr4_4:36936209-36936228 Msa0679300:CDS 35.0%
AAAGTCTCTTGGACAAAGTA+AGG + chr4_4:36936271-36936290 Msa0679300:CDS 35.0%
AAGTCTCTTGGACAAAGTAA+GGG + chr4_4:36936272-36936291 Msa0679300:CDS 35.0%
ATACAGTGAGCTTGATTCAA+GGG + chr4_4:36936307-36936326 Msa0679300:intron 35.0%
! AAGAAATGGGCTCTATTAAG+TGG + chr4_4:36936431-36936450 Msa0679300:CDS 35.0%
CATACCATTAGACCTTTAAC+AGG - chr4_4:36936782-36936801 None:intergenic 35.0%
TAAATGTGCAATGGAGTTGA+GGG + chr4_4:36936883-36936902 Msa0679300:intron 35.0%
CTGACTATTTATCAATCTGC+AGG + chr4_4:36936930-36936949 Msa0679300:intron 35.0%
ATGCACATCTCAAACCTTAA+TGG + chr4_4:36937063-36937082 Msa0679300:intron 35.0%
AGTTACTTCAGTAATACGAC+TGG - chr4_4:36937143-36937162 None:intergenic 35.0%
ATTTACGTGCAGTGTAGTAT+TGG + chr4_4:36937263-36937282 Msa0679300:CDS 35.0%
! CAGTTTAGAATTGAAGCTCA+AGG + chr4_4:36937620-36937639 Msa0679300:three_prime_UTR 35.0%
!! TCAAGGAAAGTACTTGCAAT+CGG + chr4_4:36937637-36937656 Msa0679300:three_prime_UTR 35.0%
TATAGTTCTTCTTCGACAAC+GGG + chr4_4:36937692-36937711 Msa0679300:three_prime_UTR 35.0%
TGTTGAGCATAACTTTAGCA+TGG + chr4_4:36937866-36937885 Msa0679300:three_prime_UTR 35.0%
ATACAGAGAGAAGAGAGAAA+GGG - chr4_4:36937902-36937921 None:intergenic 35.0%
AATACAGAGAGAAGAGAGAA+AGG - chr4_4:36937903-36937922 None:intergenic 35.0%
! CACAATGTGATTTGAGTTAC+AGG + chr4_4:36938117-36938136 Msa0679300:three_prime_UTR 35.0%
TCTTTCAGTCAAAGATCTGA+TGG + chr4_4:36938174-36938193 Msa0679300:three_prime_UTR 35.0%
! CAGATACATGCCTTGTTAAA+AGG - chr4_4:36938401-36938420 None:intergenic 35.0%
!!! TTGTGAATTTTGGTTGGGTC+TGG + chr4_4:36933565-36933584 Msa0679300:intron 40.0%
!! GTCATTTTCCTTCCTCTGTT+TGG + chr4_4:36933658-36933677 Msa0679300:intron 40.0%
!!! GGTGAGAGCTTGAGTTTTTT+TGG + chr4_4:36933761-36933780 Msa0679300:intron 40.0%
TTATGAAGGTTGCCCATGTA+TGG + chr4_4:36933846-36933865 Msa0679300:intron 40.0%
TTGCCCTGTTCATATACATG+TGG + chr4_4:36933880-36933899 Msa0679300:five_prime_UTR 40.0%
CATGTGGTATCCCAAAACTA+AGG + chr4_4:36933896-36933915 Msa0679300:five_prime_UTR 40.0%
AAGAGTGGAGAGTTAGAGAA+TGG + chr4_4:36934165-36934184 Msa0679300:CDS 40.0%
AGAGTGGAGAGTTAGAGAAT+GGG + chr4_4:36934166-36934185 Msa0679300:CDS 40.0%
GAGAGTTAGAGAATGGGATT+TGG + chr4_4:36934172-36934191 Msa0679300:CDS 40.0%
!!! GGGATTTGGCAATTTTTTCC+TGG + chr4_4:36934186-36934205 Msa0679300:CDS 40.0%
GCTCAATCCAAGAGATTATC+AGG + chr4_4:36934267-36934286 Msa0679300:CDS 40.0%
ATCAGGCAAATTCTCCAAGA+AGG + chr4_4:36934284-36934303 Msa0679300:CDS 40.0%
TCAAGGTGACCTATGAGATT+AGG + chr4_4:36934351-36934370 Msa0679300:intron 40.0%
!! TATATGTGTTGGTGTCGGTT+TGG - chr4_4:36934420-36934439 None:intergenic 40.0%
CAACCATGTTGTGATAAGGT+TGG + chr4_4:36934584-36934603 Msa0679300:intron 40.0%
!! GATAAGGTTGGTTTGAAGAG+AGG + chr4_4:36934596-36934615 Msa0679300:intron 40.0%
TGATCTTCTTCAATAGCCCA+TGG - chr4_4:36934623-36934642 None:intergenic 40.0%
AGAATGGTTCCTAAACTTGC+AGG + chr4_4:36934687-36934706 Msa0679300:CDS 40.0%
ATTGTACCTGTTACCAAGAC+GGG - chr4_4:36934926-36934945 None:intergenic 40.0%
GTCTGCCTAAGCATAACATA+AGG + chr4_4:36934968-36934987 Msa0679300:intron 40.0%
CAACTACGACCACAAAGTAA+CGG - chr4_4:36935175-36935194 None:intergenic 40.0%
! TTATGCAACAGTGATGGTGA+AGG + chr4_4:36935516-36935535 Msa0679300:CDS 40.0%
ACTGCACAAAGAAAGTGAAG+GGG - chr4_4:36935610-36935629 None:intergenic 40.0%
CACTGCACAAAGAAAGTGAA+GGG - chr4_4:36935611-36935630 None:intergenic 40.0%
ACACTGCACAAAGAAAGTGA+AGG - chr4_4:36935612-36935631 None:intergenic 40.0%
AAGTTCAAGAGTTTACCGGT+TGG - chr4_4:36935757-36935776 None:intergenic 40.0%
ACGAACTTCTGATATAGTGC+CGG + chr4_4:36935819-36935838 Msa0679300:intron 40.0%
! CACATTTGAAATGTTTGCGG+CGG + chr4_4:36935869-36935888 Msa0679300:intron 40.0%
GCAGCAAAGGTAAGAAGAAT+TGG + chr4_4:36936129-36936148 Msa0679300:intron 40.0%
! GACCATAATGTTGGTGAAGT+TGG + chr4_4:36936162-36936181 Msa0679300:intron 40.0%
CACCAACTTCACCAACATTA+TGG - chr4_4:36936167-36936186 None:intergenic 40.0%
! CATAATGTTGGTGAAGTTGG+TGG + chr4_4:36936165-36936184 Msa0679300:intron 40.0%
TGGTGGAATTGAAATTGGTC+AGG + chr4_4:36936182-36936201 Msa0679300:CDS 40.0%
GGTGGAATTGAAATTGGTCA+GGG + chr4_4:36936183-36936202 Msa0679300:CDS 40.0%
AGTACACTGAATTGTACCGA+GGG - chr4_4:36936244-36936263 None:intergenic 40.0%
TACTGGAACTGAAAGTCTCT+TGG + chr4_4:36936260-36936279 Msa0679300:CDS 40.0%
GATACAGTGAGCTTGATTCA+AGG + chr4_4:36936306-36936325 Msa0679300:intron 40.0%
TACAGTGAGCTTGATTCAAG+GGG + chr4_4:36936308-36936327 Msa0679300:intron 40.0%
TAGGCTTAGCTGCAATATCT+TGG + chr4_4:36936372-36936391 Msa0679300:CDS 40.0%
GCTGCAATATCTTGGTTGAA+AGG + chr4_4:36936380-36936399 Msa0679300:CDS 40.0%
GAAAAGCTGCAGGAAGAAAT+GGG + chr4_4:36936418-36936437 Msa0679300:CDS 40.0%
GTGGAAGACACTTATTCTTC+AGG + chr4_4:36936450-36936469 Msa0679300:CDS 40.0%
CCTTTAACAGGTAAAGGTTG+AGG - chr4_4:36936770-36936789 None:intergenic 40.0%
CCTCAACCTTTACCTGTTAA+AGG + chr4_4:36936767-36936786 Msa0679300:intron 40.0%
AATGGTATGTGTGCGTAAAG+TGG + chr4_4:36936793-36936812 Msa0679300:intron 40.0%
CTAAATGTGCAATGGAGTTG+AGG + chr4_4:36936882-36936901 Msa0679300:intron 40.0%
AAATGTGCAATGGAGTTGAG+GGG + chr4_4:36936884-36936903 Msa0679300:intron 40.0%
CACATCATCGAGTTATTGCT+GGG - chr4_4:36937000-36937019 None:intergenic 40.0%
!! TTATGGTGCTGCAATAAGTG+AGG + chr4_4:36937026-36937045 Msa0679300:intron 40.0%
GTGGAAATAGATCTTCTGAC+TGG + chr4_4:36937214-36937233 Msa0679300:CDS 40.0%
! GAGTATTGCTCTGTCTTTGA+CGG + chr4_4:36937297-36937316 Msa0679300:CDS 40.0%
TAGAAGCTTGAAGATTGCTG+AGG + chr4_4:36937427-36937446 Msa0679300:intron 40.0%
TGAGGCTCTTGAAGTACAAA+TGG + chr4_4:36937445-36937464 Msa0679300:exon 40.0%
CTTGCAATCGGTACTAATGA+AGG + chr4_4:36937649-36937668 Msa0679300:three_prime_UTR 40.0%
TACAGAGAGAAGAGAGAAAG+GGG - chr4_4:36937901-36937920 None:intergenic 40.0%
CTTTCTCAAAAAAGCCAGAG+AGG - chr4_4:36937982-36938001 None:intergenic 40.0%
TTGAACATTCATCACTTCCC+AGG + chr4_4:36938072-36938091 Msa0679300:three_prime_UTR 40.0%
ACGTATCAGAGAGGAAGATA+AGG + chr4_4:36938140-36938159 Msa0679300:three_prime_UTR 40.0%
! ACATGCCTTGTTAAAAGGCT+CGG - chr4_4:36938396-36938415 None:intergenic 40.0%
!!! TGAATTTTGGTTGGGTCTGG+TGG + chr4_4:36933568-36933587 Msa0679300:intron 45.0%
TGGCAAAATTGCACCGAGTT+GGG + chr4_4:36934206-36934225 Msa0679300:CDS 45.0%
AAATGCAGTTTGCCCCAACT+CGG - chr4_4:36934222-36934241 None:intergenic 45.0%
GGAGACACACCTAATCTCAT+AGG - chr4_4:36934363-36934382 None:intergenic 45.0%
! TTGGTTTGAAGAGAGGACCA+TGG + chr4_4:36934603-36934622 Msa0679300:intron 45.0%
TGGTTTGAAGAGAGGACCAT+GGG + chr4_4:36934604-36934623 Msa0679300:intron 45.0%
! TGGGATTCAGTGTTGGAGAA+TGG + chr4_4:36934671-36934690 Msa0679300:intron 45.0%
AAGCCACTTCTCTTAAGGTC+TGG - chr4_4:36934865-36934884 None:intergenic 45.0%
ATACAACTACATGCCCGTCT+TGG + chr4_4:36934910-36934929 Msa0679300:CDS 45.0%
TTTCAGCCCAAGATGAGTTG+AGG - chr4_4:36935047-36935066 None:intergenic 45.0%
CCACAAAGTAACGGTTTGAG+AGG - chr4_4:36935166-36935185 None:intergenic 45.0%
! CCTCTCAAACCGTTACTTTG+TGG + chr4_4:36935163-36935182 Msa0679300:intron 45.0%
! CGTTACTTTGTGGTCGTAGT+TGG + chr4_4:36935173-36935192 Msa0679300:intron 45.0%
!! AGTGAAGGGGAGTTTTATGC+AGG - chr4_4:36935597-36935616 None:intergenic 45.0%
!! TGTAGGGTATTGGGTTGCAT+AGG + chr4_4:36935666-36935685 Msa0679300:intron 45.0%
! GATTCATCCAGATGCTGCTT+TGG + chr4_4:36935702-36935721 Msa0679300:CDS 45.0%
ACTTTGTCCAAAGCAGCATC+TGG - chr4_4:36935712-36935731 None:intergenic 45.0%
CGAACTTCTGATATAGTGCC+GGG + chr4_4:36935820-36935839 Msa0679300:intron 45.0%
TTGAAATTGGTCAGGGTCTC+TGG + chr4_4:36936190-36936209 Msa0679300:CDS 45.0%
CAGTACACTGAATTGTACCG+AGG - chr4_4:36936245-36936264 None:intergenic 45.0%
CTCGGTACAATTCAGTGTAC+TGG + chr4_4:36936243-36936262 Msa0679300:CDS 45.0%
ACAGTGAGCTTGATTCAAGG+GGG + chr4_4:36936309-36936328 Msa0679300:intron 45.0%
CTTGATTCAAGGGGGATTCT+GGG + chr4_4:36936317-36936336 Msa0679300:intron 45.0%
!! TTCTGGGAGTACTACATCAG+AGG + chr4_4:36936333-36936352 Msa0679300:CDS 45.0%
TGAAAGGTTGAAGCCTCTCA+AGG + chr4_4:36936396-36936415 Msa0679300:CDS 45.0%
GGAAAAGCTGCAGGAAGAAA+TGG + chr4_4:36936417-36936436 Msa0679300:CDS 45.0%
CTGAGGGACTAAATGTGCAA+TGG + chr4_4:36936874-36936893 Msa0679300:intron 45.0%
GCACATCATCGAGTTATTGC+TGG - chr4_4:36937001-36937020 None:intergenic 45.0%
CTGTCTTTGACGGCAAGATA+CGG + chr4_4:36937307-36937326 Msa0679300:CDS 45.0%
TGTCTTTGACGGCAAGATAC+GGG + chr4_4:36937308-36937327 Msa0679300:CDS 45.0%
CAAAAAAGCCAGAGAGGTCT+CGG - chr4_4:36937976-36937995 None:intergenic 45.0%
AGTTACAGGACGTATCAGAG+AGG + chr4_4:36938131-36938150 Msa0679300:three_prime_UTR 45.0%
! ACAACCCGAGCCTTTTAACA+AGG + chr4_4:36938388-36938407 Msa0679300:three_prime_UTR 45.0%
! CATGCCTTGTTAAAAGGCTC+GGG - chr4_4:36938395-36938414 None:intergenic 45.0%
AGTGGGAGAGAATAACGCGA+CGG - chr4_4:36933254-36933273 None:intergenic 50.0%
! TGGTGAGTTGAAGGACGAAG+GGG - chr4_4:36933289-36933308 None:intergenic 50.0%
! GTGGTGAGTTGAAGGACGAA+GGG - chr4_4:36933290-36933309 None:intergenic 50.0%
! ACCGCCGTTCACCAATTTTC+CGG + chr4_4:36933308-36933327 Msa0679300:five_prime_UTR 50.0%
GACGCCGGAAAATTGGTGAA+CGG - chr4_4:36933315-36933334 None:intergenic 50.0%
!!! TGGTTGGGTCTGGTGGATTT+TGG + chr4_4:36933575-36933594 Msa0679300:intron 50.0%
!!! CAACTCGGTGCAATTTTGCC+AGG - chr4_4:36934207-36934226 None:intergenic 50.0%
CTGGCAAAATTGCACCGAGT+TGG + chr4_4:36934205-36934224 Msa0679300:CDS 50.0%
GGCAAAATTGCACCGAGTTG+GGG + chr4_4:36934207-36934226 Msa0679300:CDS 50.0%
GTTGCTGCAACTCACCTTCT+TGG - chr4_4:36934301-36934320 None:intergenic 50.0%
AGGCCAGACCTTAAGAGAAG+TGG + chr4_4:36934859-36934878 Msa0679300:CDS 50.0%
! TACATGCCCGTCTTGGTAAC+AGG + chr4_4:36934917-36934936 Msa0679300:intron 50.0%
TGCAACCACGATTGCAGTTG+CGG + chr4_4:36935137-36935156 Msa0679300:intron 50.0%
GGTGAAGGTCTGAACTCTGA+AGG + chr4_4:36935531-36935550 Msa0679300:intron 50.0%
CTTGGATGTGGTGTTCCAAC+CGG + chr4_4:36935739-36935758 Msa0679300:CDS 50.0%
GCTTGATTCAAGGGGGATTC+TGG + chr4_4:36936316-36936335 Msa0679300:intron 50.0%
AGGCAAGCTGCAAAGCAGTT+AGG + chr4_4:36936353-36936372 Msa0679300:CDS 50.0%
! TCCTGCAGCTTTTCCTTGAG+AGG - chr4_4:36936412-36936431 None:intergenic 50.0%
AGAGGGTCGAGGGAGAGAAA+GGG + chr4_4:36933223-36933242 Msa0679300:five_prime_UTR 55.0%
AGGGGAGAAACGCGTTCAGT+GGG - chr4_4:36933271-36933290 None:intergenic 55.0%
AAGGGGAGAAACGCGTTCAG+TGG - chr4_4:36933272-36933291 None:intergenic 55.0%
! GGTGGTGAGTTGAAGGACGA+AGG - chr4_4:36933291-36933310 None:intergenic 55.0%
GGAAAATTGGTGAACGGCGG+TGG - chr4_4:36933309-36933328 None:intergenic 55.0%
GCCGGAAAATTGGTGAACGG+CGG - chr4_4:36933312-36933331 None:intergenic 55.0%
CCAGATCGACGCCGGAAAAT+TGG - chr4_4:36933322-36933341 None:intergenic 55.0%
!!! CCAATTTTCCGGCGTCGATC+TGG + chr4_4:36933319-36933338 Msa0679300:five_prime_UTR 55.0%
CACCAACGCGTGTGAAGTGT+CGG - chr4_4:36934390-36934409 None:intergenic 55.0%
CTTCACCATGACACGATGCG+CGG - chr4_4:36935846-36935865 None:intergenic 55.0%
ATGTTTGCGGCGGAAAAGCC+AGG + chr4_4:36935879-36935898 Msa0679300:intron 55.0%
TGTTTGCGGCGGAAAAGCCA+GGG + chr4_4:36935880-36935899 Msa0679300:intron 55.0%
TGGTCAGGGTCTCTGGACAA+AGG + chr4_4:36936197-36936216 Msa0679300:CDS 55.0%
CAAATGGCTGCATTCGCCCT+CGG + chr4_4:36936225-36936244 Msa0679300:CDS 55.0%
GCCTCTCAAGGAAAAGCTGC+AGG + chr4_4:36936408-36936427 Msa0679300:CDS 55.0%
TCTTCATGCCGAGACCTCTC+TGG + chr4_4:36937965-36937984 Msa0679300:three_prime_UTR 55.0%
GAGAGGGTCGAGGGAGAGAA+AGG + chr4_4:36933222-36933241 Msa0679300:five_prime_UTR 60.0%
! GAACGGCGGTGGTGAGTTGA+AGG - chr4_4:36933298-36933317 None:intergenic 60.0%
!! CGCGTGTGAAGTGTCGGACA+CGG - chr4_4:36934384-36934403 None:intergenic 60.0%
GTCCGACACTTCACACGCGT+TGG + chr4_4:36934385-36934404 Msa0679300:intron 60.0%
GGTGTCCGCAACTGCAATCG+TGG - chr4_4:36935145-36935164 None:intergenic 60.0%
AACGGCGACCAGATCGACGC+CGG - chr4_4:36933330-36933349 None:intergenic 65.0%
CCATGACACGATGCGCGGCC+CGG - chr4_4:36935841-36935860 None:intergenic 70.0%
CCGGGCCGCGCATCGTGTCA+TGG + chr4_4:36935838-36935857 Msa0679300:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 36933215 36938499 36933215 ID=Msa0679300;Name=Msa0679300
chr4_4 mRNA 36933215 36938499 36933215 ID=Msa0679300-mRNA-1;Parent=Msa0679300;Name=Msa0679300-mRNA-1;_AED=0.15;_eAED=0.15;_QI=360|0.5|0.46|1|0.28|0.33|15|947|323
chr4_4 exon 36933215 36933425 36933215 ID=Msa0679300-mRNA-1:exon:8712;Parent=Msa0679300-mRNA-1
chr4_4 exon 36933714 36933761 36933714 ID=Msa0679300-mRNA-1:exon:8713;Parent=Msa0679300-mRNA-1
chr4_4 exon 36933854 36933917 36933854 ID=Msa0679300-mRNA-1:exon:8714;Parent=Msa0679300-mRNA-1
chr4_4 exon 36934089 36934305 36934089 ID=Msa0679300-mRNA-1:exon:8715;Parent=Msa0679300-mRNA-1
chr4_4 exon 36934681 36934708 36934681 ID=Msa0679300-mRNA-1:exon:8716;Parent=Msa0679300-mRNA-1
chr4_4 exon 36934809 36934931 36934809 ID=Msa0679300-mRNA-1:exon:8717;Parent=Msa0679300-mRNA-1
chr4_4 exon 36935478 36935537 36935478 ID=Msa0679300-mRNA-1:exon:8718;Parent=Msa0679300-mRNA-1
chr4_4 exon 36935671 36935678 36935671 ID=Msa0679300-mRNA-1:exon:8719;Parent=Msa0679300-mRNA-1
chr4_4 exon 36935688 36935760 36935688 ID=Msa0679300-mRNA-1:exon:8720;Parent=Msa0679300-mRNA-1
chr4_4 exon 36936181 36936311 36936181 ID=Msa0679300-mRNA-1:exon:8721;Parent=Msa0679300-mRNA-1
chr4_4 exon 36936328 36936471 36936328 ID=Msa0679300-mRNA-1:exon:8722;Parent=Msa0679300-mRNA-1
chr4_4 exon 36936952 36937042 36936952 ID=Msa0679300-mRNA-1:exon:8723;Parent=Msa0679300-mRNA-1
chr4_4 exon 36937214 36937329 36937214 ID=Msa0679300-mRNA-1:exon:8724;Parent=Msa0679300-mRNA-1
chr4_4 exon 36937430 36937499 36937430 ID=Msa0679300-mRNA-1:exon:8725;Parent=Msa0679300-mRNA-1
chr4_4 exon 36937605 36938499 36937605 ID=Msa0679300-mRNA-1:exon:8726;Parent=Msa0679300-mRNA-1
chr4_4 five_prime_UTR 36933215 36933425 36933215 ID=Msa0679300-mRNA-1:five_prime_utr;Parent=Msa0679300-mRNA-1
chr4_4 five_prime_UTR 36933714 36933761 36933714 ID=Msa0679300-mRNA-1:five_prime_utr;Parent=Msa0679300-mRNA-1
chr4_4 five_prime_UTR 36933854 36933917 36933854 ID=Msa0679300-mRNA-1:five_prime_utr;Parent=Msa0679300-mRNA-1
chr4_4 five_prime_UTR 36934089 36934125 36934089 ID=Msa0679300-mRNA-1:five_prime_utr;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36934126 36934305 36934126 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36934681 36934708 36934681 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36934809 36934931 36934809 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36935478 36935537 36935478 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36935671 36935678 36935671 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36935688 36935760 36935688 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36936181 36936311 36936181 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36936328 36936471 36936328 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36936952 36937042 36936952 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36937214 36937329 36937214 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 CDS 36937430 36937447 36937430 ID=Msa0679300-mRNA-1:cds;Parent=Msa0679300-mRNA-1
chr4_4 three_prime_UTR 36937448 36937499 36937448 ID=Msa0679300-mRNA-1:three_prime_utr;Parent=Msa0679300-mRNA-1
chr4_4 three_prime_UTR 36937605 36938499 36937605 ID=Msa0679300-mRNA-1:three_prime_utr;Parent=Msa0679300-mRNA-1
Gene Sequence

>Msa0679300

ATGTATCTAAGAATGAAATTGACTTTGACAAGAAGTTTCAAGAGTGGAGAGTTAGAGAATGGGATTTGGCAATTTTTTCCTGGCAAAATTGCACCGAGTTGGGGCAAACTGCATTTTTTTCAAGTTATTGATCACTTGGCTGCTCAATCCAAGAGATTATCAGGCAAATTCTCCAAGAAGTGTTGGAGAATGGTTCCTAAACTTGCAGGTCTTCTAAGATATGGAAAGTGTTCTAGATTGAGATGGATTAATTATTTGAGGCCAGACCTTAAGAGAAGTGGCTTTACTAAAATGGAAGAGGATCAAATTATACAACTACATGCCCGTCTTGGAAAGTTGTTTTTTTCCTCTGAAAATACTGAAGTTGATTTATGCAACAGTGATGGTGAAGGGTATTGGGTTATTGTTGCTAAGATTCATCCAGATGCTGCTTTGGACAAAGTTTATCTTCTTGGATGTGGTGTTCCAACCGTTGGTGGAATTGAAATTGGTCAGGGTCTCTGGACAAAGGTTAAACAAATGGCTGCATTCGCCCTCGGTACAATTCAGTGTACTGGAACTGAAAGTCTCTTGGACAAAGTAAGGGTTGTACAAGCTGATACAGGGGATTCTGGGAGTACTACATCAGAGGCAAGCTGCAAAGCAGTTAGGCTTAGCTGCAATATCTTGGTTGAAAGGTTGAAGCCTCTCAAGGAAAAGCTGCAGGAAGAAATGGGCTCTATTAAGTGGAAGACACTTATTCTTCAGGCATACATGCAATCTGTGAACTTATCAGTGTCTTCATTTTACGTACCCAGCAATAACTCGATGATGTGCTTTAATTATGGTGCTGCAATAAGTGGAAATAGATCTTCTGACTGGAATAAAGAGTATTATTTCATATTGTTATTTACGTGCAGTGTAGTATTGGCTATGAGTAAAGAGTATTGCTCTGTCTTTGACGGCAAGATACGGAAGCTTGAAGATTGCTGA
Protein sequence

>Msa0679300

MYLRMKLTLTRSFKSGELENGIWQFFPGKIAPSWGKLHFFQVIDHLAAQSKRLSGKFSKKCWRMVPKLAGLLRYGKCSRLRWINYLRPDLKRSGFTKMEEDQIIQLHARLGKLFFSSENTEVDLCNSDGEGYWVIVAKIHPDAALDKVYLLGCGVPTVGGIEIGQGLWTKVKQMAAFALGTIQCTGTESLLDKVRVVQADTGDSGSTTSEASCKAVRLSCNILVERLKPLKEKLQEEMGSIKWKTLILQAYMQSVNLSVSSFYVPSNNSMMCFNYGAAISGNRSSDWNKEYYFILLFTCSVVLAMSKEYCSVFDGKIRKLEDC*